diff --git a/README.rst b/README.rst index 9f566fd97..b8e505e9d 100644 --- a/README.rst +++ b/README.rst @@ -22,11 +22,12 @@ Python/C package for analysis of extensive molecular dynamics simulations. In particular, it includes algorithms for estimation, validation and analysis of: + * Clustering and Featurization * Markov state models (MSMs) * Hidden Markov models (HMMs) * multi-ensemble Markov models (MEMMs) * Time-lagged independent component analysis (TICA) - * Clustering and Featurization. + * Transition Path Theory (TPT) PyEMMA can be used from Jupyther (former IPython, recommended), or by writing Python scripts. The docs, can be found at