pyproject.toml

[build-system]
requires = ["numpy>=2.0","cython >=3.0","setuptools >= 61.0"]
build-backend = "setuptools.build_meta"

[project]
name = "radius-clustering"
version = "1.1.0"
description = "A Clustering under radius constraints algorithm using minimum dominating sets"
readme = "README.md"
authors = [
    {name = "Quentin Haenn"},
    {name = "Lias Laboratory"}
]

dependencies = [
    "matplotlib>=3.6.2",
    "numpy>=1.23",
    "scikit-learn>=1.2.2",
    "scipy>=1.12.0",
]

requires-python = ">=3.9"
license = {file = "LICENSE"}
classifiers=[
  "Intended Audience :: Science/Research",
  "Intended Audience :: Developers",
  "License :: OSI Approved :: MIT License",
  "Programming Language :: C",
  "Programming Language :: C++",
  "Programming Language :: Python",
  "Topic :: Software Development",
  "Topic :: Scientific/Engineering",
  "Operating System :: Microsoft :: Windows",
  "Operating System :: POSIX",
  "Operating System :: Unix",
  "Programming Language :: Python :: 3",
  "Programming Language :: Python :: 3.9",
  "Programming Language :: Python :: 3.10",
  "Programming Language :: Python :: 3.11",
  "Programming Language :: Python :: 3.12",
  "Programming Language :: Python :: 3.13",
  "Programming Language :: Python :: Implementation :: CPython",
]
keywords = ["Unsupervised learning","clustering", "minimum dominating sets","clustering under radius constraint"]

[project.urls]
source = "https://github.com/lias-laboratory/radius_clustering"
tracker = "https://github.com/lias-laboratory/radius_clustering/issues"
documentation = "https://lias-laboratory.github.io/radius_clustering/"

[project.optional-dependencies]
dev = [
    "pytest>=8.3.3",
    "cython>=3.0",
    "setuptools>= 61.0",
    "black>=24.3.0",
    "ruff>=0.4.8",
    "sphinx>=8.1.3",
    "sphinx_gallery>=0.18.0",
    "sphinx-copybutton>=0.5.2",
    "pydata-sphinx-theme>=0.15.3",
    "sphinxcontrib-email>=0.3.6",
    "sphinx-remove-toctrees>=1.0.0",
    "sphinx-prompt>=1.9.0",
    "sphinx_design>=0.6.1",
    "sphinxcontrib.sass >= 0.3.4",
]

doc = [
    "sphinx>=8.1.3",
    "sphinx_gallery>=0.18.0",
    "sphinx-copybutton>=0.5.2",
    "pydata-sphinx-theme>=0.15.3",
    "sphinxcontrib-email>=0.3.6",
    "sphinx-remove-toctrees>=1.0.0",
    "sphinx-prompt>=1.9.0",
    "sphinx_design>=0.6.1",
    "sphinxcontrib.sass >= 0.3.4",
]

[tool.setuptools]
packages = ["radius_clustering"]

[tool.ruff]
# Exclude a variety of commonly ignored directories.
exclude = [
    ".git",
    ".git-rewrite",
    ".pytest_cache",
    ".ruff_cache",
    ".venv",
    ".vscode",
    "__pypackages__",
    "_build",
    "buck-out",
    "build",
    "dist",
    "site-packages",
    "venv",
    "**.egg-info",
    "tests",
    "examples",
]

# Same as Black.
line-length = 88
indent-width = 4

[tool.ruff.lint]
# Enable Pyflakes (`F`) and a subset of the pycodestyle (`E`)  codes by default.
# Unlike Flake8, Ruff doesn't enable pycodestyle warnings (`W`) or
# McCabe complexity (`C901`) by default.
select = ["E", "F"]
ignore = []

# Allow fix for all enabled rules (when `--fix`) is provided.
fixable = ["ALL"]
unfixable = []

# Allow unused variables when underscore-prefixed.
dummy-variable-rgx = "^(_+|(_+[a-zA-Z0-9_]*[a-zA-Z0-9]+?))$"

[tool.ruff.format]
# Like Black, use double quotes for strings.
quote-style = "double"

# Like Black, indent with spaces, rather than tabs.
indent-style = "space"

# Like Black, respect magic trailing commas.
skip-magic-trailing-comma = false

# Like Black, automatically detect the appropriate line ending.
line-ending = "auto"

# Enable auto-formatting of code examples in docstrings.
docstring-code-format = true

# Set the line length limit used when formatting code snippets in
# docstrings.
docstring-code-line-length = "dynamic"


[tool.cibuildwheel]
# Skip building for PyPy, python 3.6/7/8 and 13t, and 32-bit platforms.
skip = ["pp*", "cp36-*", "cp37-*", "cp38-*", "*-win32", "*linux_i686", "*musllinux*"]