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publications.html
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<!DOCTYPE HTML>
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<h2>Publications</h2>
<p>PDF versions of papers are protected by copyright holders but could be provided by reasonable requests</p>
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<section>
<h3>2021</h3>
<ul>
<li>Yan, Chaoyang, Jing‐Jing Lu, Kang Chen, Lei Wang, Haoda Lu, Li Yu, Mengyan Sun, and Jun Xu. "Scale‐and Slice‐aware Net (S2aNet) for 3D segmentation of organs and musculoskeletal structures in pelvic MRI." Magnetic Resonance in Medicine (2021).</li>
<li>Bian, Yun, Cong Liu, Qi Li, Yinghao Meng, Fang Liu, Hao Zhang, Xu Fang et al. "Preoperative Radiomics Approach to Evaluating Tumor‐Infiltrating CD8+ T Cells in Patients With Pancreatic Ductal Adenocarcinoma Using Noncontrast Magnetic Resonance Imaging." Journal of Magnetic Resonance Imaging (2021).</li>
<li>Liu, Cong, Yun Bian, Yinghao Meng, Fang Liu, Kai Cao, Hao Zhang, Xu Fang et al. "Preoperative Prediction of G1 and G2/3 Grades in Patients With Nonfunctional Pancreatic Neuroendocrine Tumors Using Multimodality Imaging." Academic Radiology (2021).</li>
<li>Xu, J., Lu, H., Li, H., Yan, C., Wang, X., Zang, M., ... & Xu, E. Y. (2021). Computerized spermatogenesis staging (CSS) of mouse testis sections via quantitative histomorphological analysis. Medical image analysis, 70, 101835.</li>
<li>Koyuncu, C. F., Lu, C., Bera, K., Zhang, Z., Xu, J., Toro, P., ... & Madabhushi, A. (2021). Computerized tumor multinucleation index (MuNI) is prognostic in p16+ oropharyngeal carcinoma. The Journal of Clinical Investigation, 131(8).</li>
<li>Zhang, Z., Li, B., & Xu, J. (2021). Automatic three-dimensional segmentation of liver and tumors regions based on conditional generative adversarial networks. Sheng wu yi xue Gong Cheng xue za zhi= Journal of Biomedical Engineering= Shengwu Yixue Gongchengxue Zazhi, 38(1), 80-88.</li>
<li>X Wang, Bera, K. , Barrera, C. , Zhou, Y. , & Madabhushi, A. . (2021). A prognostic and predictive computational pathology image signature for added benefit of adjuvant chemotherapy in early stage non-small-cell lung cancer. EBioMedicine, 69, 103481.</li>
<li>Lu, C., Koyuncu, C., Corredor, G., Prasanna, P., Leo, P., Wang, X., ... & Madabhushi, A. (2021). Feature-driven local cell graph (FLocK): New computational pathology-based descriptors for prognosis of lung cancer and HPV status of oropharyngeal cancers. Medical Image Analysis, 68, 101903.</li>
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<hr />
<h3>2020</h3>
<ul>
<li>Zhao, Z., Bian, Y., Jiang, H., Fang, X., Li, J., Cao, K., ... & Lu, J. (2020). CT-radiomic approach to predict G1/2 nonfunctional pancreatic neuroendocrine tumor. Academic radiology, 27(12), e272-e281.</li>
<li>u, C., Bera, K., Wang, X., Prasanna, P., Xu, J., Janowczyk, A., ... & Madabhushi, A. (2020). A prognostic model for overall survival of patients with early-stage non-small cell lung cancer: a multicentre, retrospective study. The Lancet Digital Health, 2(11), e594-e606.</li>
<li>Wang, Y., Sun, L., Wang, H., Shklovskiy-Kordi, N., Xu, J., Lu, Y., & Yuan, K. (2020, October). A DNN for Arrhythmia Prediction Based on ECG. In International Conference on Health Information Science (pp. 146-153). Springer, Cham.</li>
<li>Yan, C., Nakane, K., Wang, X., Fu, Y., Lu, H., Fan, X., ... & Xu, J. (2020). Automated gleason grading on prostate biopsy slides by statistical representations of homology profile. Computer Methods and Programs in Biomedicine, 194, 105528.</li>
<li>Yan, C., Xu, J., Xie, J., Cai, C., & Lu, H. (2020, April). Prior-Aware CNN with Multi-Task Learning for Colon Images Analysis. In 2020 IEEE 17th International Symposium on Biomedical Imaging (ISBI) (pp. 254-257). IEEE.</li>
<li>Vaidya, P., Bera, K., Gupta, A., Wang, X., Corredor, G., Fu, P., ... & Madabhushi, A. (2020). CT derived radiomic score for predicting the added benefit of adjuvant chemotherapy following surgery in stage I, II resectable non-small cell lung cancer: a retrospective multicohort study for outcome prediction. The Lancet Digital Health, 2(3), e116-e128.</li>
</ul>
<hr />
<h3>2019</h3>
<ul>
<li>Yan, C., Cai, C., Xie, J., Fu, Y., Shuai, H., Fan, X., & Xu, J. (2019). Prior Consistent CNN with Multi-Task Learning for Colon Image Classification.</li>
<li>Xu, J., Lu, H., Li, H., Wang, X., Madabhushi, A., & Xu, Y. (2019, April). Histopathological image analysis on mouse testes for automated staging of mouse seminiferous tubule. In European Congress on Digital Pathology (pp. 117-124). Springer, Cham.</li>
<li>Xu, J., Cai, C., Zhou, Y., Yao, B., Xu, G., Wang, X., ... & Liang, L. (2019, April). Multi-tissue partitioning for whole slide images of colorectal cancer histopathology images with deeptissue net. In European Congress on Digital Pathology (pp. 100-108). Springer, Cham.</li>
<li>Lewis, J., Zhang, Z., Xu, J., Lu, C., Bishop, J., & Madabhushi, A. (2019, March). Computerized Quantitation of Tumor Cell Multinucleation is Strongly Prognostic for p16-Positive Oropharyngeal Squamous Cell Carcinoma. In LABORATORY INVESTIGATION (Vol. 99). 75 VARICK ST, 9TH FLR, NEW YORK, NY 10013-1917 USA: NATURE PUBLISHING GROUP.</li>
<li>Xu, J., Gong, L., Wang, G., Lu, C., Gilmore, H., Zhang, S., & Madabhushi, A. (2019). Convolutional neural network initialized active contour model with adaptive ellipse fitting for nuclear segmentation on breast histopathological images. Journal of Medical Imaging, 6(1), 017501.</li>
<li>Wang, X., Moh, S., Hubbard, A., Muñoz-Rodríguez, J. L., Khojasteh, M., Martin, J., ... & Zhang, W. (2019). Case classification with tumor antigen presenting and TGF-β signaling biomarkers to predict anti-PD-1 outcome in GI tract tumors using automated quantitative fluorescence multiplex IHC.</li>
<li>Wang, X., Barrera, C., Lu, C., Yang, M., Velcheti, V., & Madabhushi, A. (2019, March). Computerized nuclear morphometric features from H&E slide images are prognostic of recurrence and predictive of added benefit of adjuvant chemotherapy in early stage non-small cell lung cancer. In LABORATORY INVESTIGATION (Vol. 99). 75.</li>
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