OnCo/CITATION.cff at main · judegomila/OnCo · GitHub

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# Citation File Format 1.2.0 (https://citation-file-format.github.io). GitHub shows a "Cite this repository"
# button from this file; Zenodo reads it when it archives a release. Two things to cite: the software
# (this record) and the corpus it publishes (preferred-citation, type dataset). Once Zenodo has issued a
# concept DOI, add it under identifiers and under preferred-citation.identifiers; do not invent one.
cff-version: 1.2.0
message: >-
  If you use OnCo, please cite the dataset below and attribute it as "Data from OnCo (onco.cc)" with a
  link to https://onco.cc. The data are CC BY-NC 4.0: free for individual and educational use with
  attribution; commercial use must contact OnCo to pay for the data. The code is MIT.
type: software
title: "OnCo: a public, cited knowledge graph of oncology"
abstract: >-
  OnCo maps oncology as a linked corpus: cancers, fronts, technologies, targets, treatments and tests,
  companies, institutions, people, pathways, trials, pairings, roadmaps, key papers, journals, bottlenecks
  and ideas, one record per object, each with a plain-English TL;DR, a technical summary, dated facts and
  links to primary sources. The same corpus is published as a website, a static JSON API with Markdown
  context files, Atom feeds and RDF triples, a command-line tool and a Model Context Protocol server.
  Nothing in it is medical advice.
authors:
  - family-names: Gomila
    given-names: Jude
    website: https://judegomila.com
  - name: OnCo contributors
    website: https://onco.cc/contributors/
version: 1.0.0
date-released: 2026-09-16
license: MIT
license-url: https://github.com/judegomila/OnCo/blob/main/LICENSE
repository-code: https://github.com/judegomila/OnCo
url: https://onco.cc
keywords:
  - oncology
  - cancer
  - knowledge graph
  - open data
  - clinical trials
  - drug targets
  - antibody-drug conjugates
  - radiopharmaceuticals
  - precision medicine
preferred-citation:
  type: dataset
  title: "OnCo corpus: a public, cited knowledge graph of oncology"
  authors:
    - family-names: Gomila
      given-names: Jude
    - name: OnCo contributors
  version: 0.4.0
  date-released: 2026-09-08
  url: https://onco.cc/api/
  repository-code: https://github.com/judegomila/OnCo
  license: CC-BY-NC-4.0
  license-url: https://github.com/judegomila/OnCo/blob/main/LICENSE-DATA
  notes: >-
    Published as JSON, NDJSON, CSV, JSON Schema, Markdown context files and RDF N-Triples under
    https://onco.cc/api/v1/ and attached to each tagged GitHub release. Attribution: "Data from OnCo
    (onco.cc)". Facts may be incomplete or out of date; verify at the primary source each record links.