Issue in `jpype1==1.5.1` on Mac OS 15.2 #1253

kunaljubce · 2025-01-20T14:22:53Z

kunaljubce
Jan 20, 2025

Before going into the issue, it's important to note that we have been using jpype==1.5.0 for the last couple of years in our organisation as a build dependency for packages using pipenv without any issues.

However, it seems with the latest release of jpype==1.5.1, something is broken and it is completely breaking our dependency builds when we do pipenv sync -d. Also observed the same error message with uv sync, so it seems to be an issue with the new release of jpype. Appreciate some inputs on how to fix this as other discussions (like this) are quite outdated for our OS.

Error log:

$ /Users/a81045729/.local/share/virtualenvs/airflow_dags--J0EGIsP/bin/python /opt/homebrew/Cellar/pipenv/2024.0.3/libexec/lib/python3.12/site-packages/pipenv/patched/pip/__pip-runner__.py 
install -i https://pypi.org/simple --no-input --upgrade --no-deps -r /var/folders/0f/4pq6pm0x4q33m2gtq59d7q4c0000gq/T/pipenv-b8xfsa5v-requirements/pipenv-y87i3vbv-reqs.txt
Using source directory: '/Users/a81045729/.local/share/virtualenvs/airflow_dags--J0EGIsP/src'
error: subprocess-exited-with-error
  
  × Building wheel for jpype1 (pyproject.toml) did not run successfully.
  │ exit code: 1
  ╰─> [71 lines of output]
      Falling back to provided JNI headers, since your provided JAVA_HOME "/Library/Internet Plug-Ins/JavaAppletPlugin.plugin/Contents/Home" does not provide jni.h
      running bdist_wheel
      running build
      running build_py
      creating build/lib.macosx-14.3-arm64-cpython-39/jpype
      copying jpype/_jcollection.py -> build/lib.macosx-14.3-arm64-cpython-39/jpype
      copying jpype/_classpath.py -> build/lib.macosx-14.3-arm64-cpython-39/jpype
      copying jpype/_jio.py -> build/lib.macosx-14.3-arm64-cpython-39/jpype
      copying jpype/_pykeywords.py -> build/lib.macosx-14.3-arm64-cpython-39/jpype
      copying jpype/_jproxy.py -> build/lib.macosx-14.3-arm64-cpython-39/jpype
      copying jpype/_gui.py -> build/lib.macosx-14.3-arm64-cpython-39/jpype
      copying jpype/config.py -> build/lib.macosx-14.3-arm64-cpython-39/jpype
      copying jpype/_jmethod.py -> build/lib.macosx-14.3-arm64-cpython-39/jpype
      copying jpype/nio.py -> build/lib.macosx-14.3-arm64-cpython-39/jpype
      copying jpype/_jstring.py -> build/lib.macosx-14.3-arm64-cpython-39/jpype
      copying jpype/protocol.py -> build/lib.macosx-14.3-arm64-cpython-39/jpype
      copying jpype/__init__.py -> build/lib.macosx-14.3-arm64-cpython-39/jpype
      copying jpype/types.py -> build/lib.macosx-14.3-arm64-cpython-39/jpype
      copying jpype/beans.py -> build/lib.macosx-14.3-arm64-cpython-39/jpype
      copying jpype/_jvmfinder.py -> build/lib.macosx-14.3-arm64-cpython-39/jpype
      copying jpype/imports.py -> build/lib.macosx-14.3-arm64-cpython-39/jpype
      copying jpype/_jcustomizer.py -> build/lib.macosx-14.3-arm64-cpython-39/jpype
      copying jpype/_core.py -> build/lib.macosx-14.3-arm64-cpython-39/jpype
      copying jpype/_jthread.py -> build/lib.macosx-14.3-arm64-cpython-39/jpype
      copying jpype/_jinit.py -> build/lib.macosx-14.3-arm64-cpython-39/jpype
      copying jpype/_jarray.py -> build/lib.macosx-14.3-arm64-cpython-39/jpype
      copying jpype/_jobject.py -> build/lib.macosx-14.3-arm64-cpython-39/jpype
      copying jpype/dbapi2.py -> build/lib.macosx-14.3-arm64-cpython-39/jpype
      copying jpype/pickle.py -> build/lib.macosx-14.3-arm64-cpython-39/jpype
      copying jpype/_jclass.py -> build/lib.macosx-14.3-arm64-cpython-39/jpype
      copying jpype/_jexception.py -> build/lib.macosx-14.3-arm64-cpython-39/jpype
      copying jpype/_jpackage.py -> build/lib.macosx-14.3-arm64-cpython-39/jpype
      creating build/lib.macosx-14.3-arm64-cpython-39/jpype/_pyinstaller
      copying jpype/_pyinstaller/entry_points.py -> build/lib.macosx-14.3-arm64-cpython-39/jpype/_pyinstaller
      copying jpype/_pyinstaller/test_jpype_pyinstaller.py -> build/lib.macosx-14.3-arm64-cpython-39/jpype/_pyinstaller
      copying jpype/_pyinstaller/example.py -> build/lib.macosx-14.3-arm64-cpython-39/jpype/_pyinstaller
      copying jpype/_pyinstaller/hook-jpype.py -> build/lib.macosx-14.3-arm64-cpython-39/jpype/_pyinstaller
      running egg_info
      writing jpype1.egg-info/PKG-INFO
      writing dependency_links to jpype1.egg-info/dependency_links.txt
      writing entry points to jpype1.egg-info/entry_points.txt
      writing requirements to jpype1.egg-info/requires.txt
      writing top-level names to jpype1.egg-info/top_level.txt
      reading manifest file 'jpype1.egg-info/SOURCES.txt'
      reading manifest template 'MANIFEST.in'
      warning: no files found matching '*.class' under directory 'native'
      no previously-included directories found matching 'test/classes/*'
      warning: no previously-included files matching '*.pyc' found anywhere in distribution
      adding license file 'LICENSE'
      adding license file 'NOTICE'
      adding license file 'AUTHORS.rst'
      writing manifest file 'jpype1.egg-info/SOURCES.txt'
      copying jpype/_jarray.pyi -> build/lib.macosx-14.3-arm64-cpython-39/jpype
      copying jpype/_jcollection.pyi -> build/lib.macosx-14.3-arm64-cpython-39/jpype
      copying jpype/_jio.pyi -> build/lib.macosx-14.3-arm64-cpython-39/jpype
      warning: build_py: byte-compiling is disabled, skipping.
      
      running build_ext
      Using Jar cache
      copying native/jars/org.jpype.jar -> build/lib.macosx-14.3-arm64-cpython-39
      Call build ext
      building '_jpype' extension
      creating build/temp.macosx-14.3-arm64-cpython-39/native/common
      creating build/temp.macosx-14.3-arm64-cpython-39/native/python
      clang++ -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -fwrapv -Wall -DOPENSSL_NO_SSL3 -I/opt/homebrew/Cellar/openssl@3/3.4.0/include -DMACOSX=1 -Inative/common/include
-Inative/python/include -Inative/embedded/include "-I/Library/Internet Plug-Ins/JavaAppletPlugin.plugin/Contents/Home/include" -Inative/jni_include 
-I/Users/a81045729/.local/share/virtualenvs/airflow_dags--J0EGIsP/include -I/Users/a81045729/.pyenv/versions/3.9.18/include/python3.9 -c native/common/jp_array.cpp -o 
build/temp.macosx-14.3-arm64-cpython-39/native/common/jp_array.o -g0 -std=c++11 -O2
      In file included from native/common/jp_array.cpp:16:
      native/common/include/jpype.h:64:10: fatal error: 'map' file not found
         64 | #include <map>
            |          ^~~~~
      1 error generated.
      error: command '/usr/bin/clang++' failed with exit code 1
      
  
  note: This error originates from a subprocess, and is likely not a problem with pip.
  ERROR: Failed building wheel for jpype1
ERROR: Could not build wheels for jpype1, which is required to install pyproject.toml-based projects
: error: subprocess-exited-with-error
:   
:   × Building wheel for jpype1 (pyproject.toml) did not run successfully.
:   │ exit code: 1
:   ╰─> [71 lines of output]
:       Falling back to provided JNI headers, since your provided JAVA_HOME "/Library/Internet Plug-Ins/JavaAppletPlugin.plugin/Contents/Home" does not provide jni.h
:       running bdist_wheel
:       running build
:       running build_py
:       creating build/lib.macosx-14.3-arm64-cpython-39/jpype
:       copying jpype/_jcollection.py -> build/lib.macosx-14.3-arm64-cpython-39/jpype
:       copying jpype/_classpath.py -> build/lib.macosx-14.3-arm64-cpython-39/jpype
:       copying jpype/_jio.py -> build/lib.macosx-14.3-arm64-cpython-39/jpype
:       copying jpype/_pykeywords.py -> build/lib.macosx-14.3-arm64-cpython-39/jpype
:       copying jpype/_jproxy.py -> build/lib.macosx-14.3-arm64-cpython-39/jpype
:       copying jpype/_gui.py -> build/lib.macosx-14.3-arm64-cpython-39/jpype
:       copying jpype/config.py -> build/lib.macosx-14.3-arm64-cpython-39/jpype
:       copying jpype/_jmethod.py -> build/lib.macosx-14.3-arm64-cpython-39/jpype
:       copying jpype/nio.py -> build/lib.macosx-14.3-arm64-cpython-39/jpype
:       copying jpype/_jstring.py -> build/lib.macosx-14.3-arm64-cpython-39/jpype
:       copying jpype/protocol.py -> build/lib.macosx-14.3-arm64-cpython-39/jpype
:       copying jpype/__init__.py -> build/lib.macosx-14.3-arm64-cpython-39/jpype
:       copying jpype/types.py -> build/lib.macosx-14.3-arm64-cpython-39/jpype
:       copying jpype/beans.py -> build/lib.macosx-14.3-arm64-cpython-39/jpype
:       copying jpype/_jvmfinder.py -> build/lib.macosx-14.3-arm64-cpython-39/jpype
:       copying jpype/imports.py -> build/lib.macosx-14.3-arm64-cpython-39/jpype
:       copying jpype/_jcustomizer.py -> build/lib.macosx-14.3-arm64-cpython-39/jpype
:       copying jpype/_core.py -> build/lib.macosx-14.3-arm64-cpython-39/jpype
:       copying jpype/_jthread.py -> build/lib.macosx-14.3-arm64-cpython-39/jpype
:       copying jpype/_jinit.py -> build/lib.macosx-14.3-arm64-cpython-39/jpype
:       copying jpype/_jarray.py -> build/lib.macosx-14.3-arm64-cpython-39/jpype
:       copying jpype/_jobject.py -> build/lib.macosx-14.3-arm64-cpython-39/jpype
:       copying jpype/dbapi2.py -> build/lib.macosx-14.3-arm64-cpython-39/jpype
:       copying jpype/pickle.py -> build/lib.macosx-14.3-arm64-cpython-39/jpype
:       copying jpype/_jclass.py -> build/lib.macosx-14.3-arm64-cpython-39/jpype
:       copying jpype/_jexception.py -> build/lib.macosx-14.3-arm64-cpython-39/jpype
:       copying jpype/_jpackage.py -> build/lib.macosx-14.3-arm64-cpython-39/jpype
:       creating build/lib.macosx-14.3-arm64-cpython-39/jpype/_pyinstaller
:       copying jpype/_pyinstaller/entry_points.py -> build/lib.macosx-14.3-arm64-cpython-39/jpype/_pyinstaller
:       copying jpype/_pyinstaller/test_jpype_pyinstaller.py -> build/lib.macosx-14.3-arm64-cpython-39/jpype/_pyinstaller
:       copying jpype/_pyinstaller/example.py -> build/lib.macosx-14.3-arm64-cpython-39/jpype/_pyinstaller
:       copying jpype/_pyinstaller/hook-jpype.py -> build/lib.macosx-14.3-arm64-cpython-39/jpype/_pyinstaller
:       running egg_info
:       writing jpype1.egg-info/PKG-INFO
:       writing dependency_links to jpype1.egg-info/dependency_links.txt
:       writing entry points to jpype1.egg-info/entry_points.txt
:       writing requirements to jpype1.egg-info/requires.txt
:       writing top-level names to jpype1.egg-info/top_level.txt
:       reading manifest file 'jpype1.egg-info/SOURCES.txt'
:       reading manifest template 'MANIFEST.in'
:       warning: no files found matching '*.class' under directory 'native'
:       no previously-included directories found matching 'test/classes/*'
:       warning: no previously-included files matching '*.pyc' found anywhere in distribution
:       adding license file 'LICENSE'
:       adding license file 'NOTICE'
:       adding license file 'AUTHORS.rst'
:       writing manifest file 'jpype1.egg-info/SOURCES.txt'
:       copying jpype/_jarray.pyi -> build/lib.macosx-14.3-arm64-cpython-39/jpype
:       copying jpype/_jcollection.pyi -> build/lib.macosx-14.3-arm64-cpython-39/jpype
:       copying jpype/_jio.pyi -> build/lib.macosx-14.3-arm64-cpython-39/jpype
:       warning: build_py: byte-compiling is disabled, skipping.
:       
:       running build_ext
:       Using Jar cache
:       copying native/jars/org.jpype.jar -> build/lib.macosx-14.3-arm64-cpython-39
:       Call build ext
:       building '_jpype' extension
:       creating build/temp.macosx-14.3-arm64-cpython-39/native/common
:       creating build/temp.macosx-14.3-arm64-cpython-39/native/python
:       clang++ -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -fwrapv -Wall -DOPENSSL_NO_SSL3 -I/opt/homebrew/Cellar/openssl@3/3.4.0/include -DMACOSX=1 
-Inative/common/include -Inative/python/include -Inative/embedded/include "-I/Library/Internet Plug-Ins/JavaAppletPlugin.plugin/Contents/Home/include" -Inative/jni_include 
-I/Users/a81045729/.local/share/virtualenvs/airflow_dags--J0EGIsP/include -I/Users/a81045729/.pyenv/versions/3.9.18/include/python3.9 -c native/common/jp_array.cpp -o 
build/temp.macosx-14.3-arm64-cpython-39/native/common/jp_array.o -g0 -std=c++11 -O2
:       In file included from native/common/jp_array.cpp:16:
:       native/common/include/jpype.h:64:10: fatal error: 'map' file not found
:          64 | #include <map>
:             |          ^~~~~
:       1 error generated.
:       error: command '/usr/bin/clang++' failed with exit code 1
:       
:   
:   note: This error originates from a subprocess, and is likely not a problem with pip.
:   ERROR: Failed building wheel for jpype1
: ERROR: Could not build wheels for jpype1, which is required to install pyproject.toml-based projects
ERROR: Couldn't install package: [1m{}[0m
 [33mPackage installation failed...[0m

kunaljubce · 2025-01-21T06:44:32Z

kunaljubce
Jan 21, 2025
Author

After a lot of trial and errors, turns out reinstalling xcode-tools was the way to fix it. Huge shoutout to this Stackoverflow answer for the resolution: https://stackoverflow.com/a/79016375

0 replies

Thrameos · 2025-01-21T15:44:40Z

Thrameos
Jan 21, 2025
Maintainer

Good to hear that you found a solution. When compiles fail on basic C++ commands it usually indicates a site problem.

0 replies

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Issue in `jpype1==1.5.1` on Mac OS 15.2 #1253

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Issue in jpype1==1.5.1 on Mac OS 15.2 #1253

kunaljubce Jan 20, 2025

Replies: 2 comments

kunaljubce Jan 21, 2025 Author

Thrameos Jan 21, 2025 Maintainer

Issue in `jpype1==1.5.1` on Mac OS 15.2 #1253

kunaljubce
Jan 20, 2025

kunaljubce
Jan 21, 2025
Author

Thrameos
Jan 21, 2025
Maintainer