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ARGraph

So far only a general ARG (CARD) sequence metadata curation script is implemented.

Setup

  1. Make sure you have pipenv installed.

$ pip install pipenv

  1. Install dependencies Do this within the base directory of the repository.

$ pipenv install

  1. Build to install CARD dependencies

$ bash build.sh

Usage

  1. Load the virtual environment

$ pipenv shell

  1. Build the gene metadata file

$ python build_db.py