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Process images with more than 3 channels #11

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maiskovich opened this issue Jun 3, 2024 · 0 comments
Open

Process images with more than 3 channels #11

maiskovich opened this issue Jun 3, 2024 · 0 comments

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@maiskovich
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Hello, thank you for the great package.

I am trying to process images with 30 channels (CycIF) in tiff format.

I am running the examples provided in the readme, and I am getting back JPEG tiles with three channels. I assume that the first three channels of my images are being picked.

Is there a supported way to deal with these types of images? I was checking the backend definition files, and based on the use of OpenSlide, it seems that it will not be supported to use images with more than three channels (openslide/openslide#42). Do we need to develop a new backend type for these images?

Thank you

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