Repo for Eucalypt analysis of Australia using records from Atlas of Living Australia (https://doi.org/10.26197/ala.3bf1b394-8646-4e3e-99d9-0ef7a5258d35).
Repo starts with: Dataprep_jack_1st.rmd where the data is cleaned from the Atlas of Living Australia records so data is at a high quality for analysis, with 33,942 records out of the original 754,717 occurrences being removed.
The cleaned data is then imported in to Biodiverse analysis software (http://www.biodiverse.unsw.edu.au), with analyses for phylogenetic endemism and phylogenetic diversity conducted in the software.
The results from Biodiverse are then imported back into R and analysed further with Post_biodiverse_analysis4.rmd for results and graphs.