initial commit : a start at the exploring data ipynb

matthew-brett · jbpoline · commit f88ac1d5d128 · 2013-02-06T18:43:37.000-08:00
diff --git a/.gitignore b/.gitignore
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+*.pyc
diff --git a/README b/README
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+#################################################
+Nipy analysis of K Duncan et al open FMRI dataset
+#################################################
+
+
diff --git a/README.rst b/README.rst
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+#################################################
+Nipy analysis of K Duncan et al open FMRI dataset
+#################################################
+
+Original dataset at: https://openfmri.org/dataset/ds000107
+
+Downloaded https://openfmri.org/system/files/ds107_raw.tgz
+
+Unpacked.
+
+Article describing dataset and analysis:
+
+http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2686646/
+
+*******************
+Description of data
+*******************
+
+* Siemens 1.5 T MR scanner
+* EPI
+  * TR = 3000 ms
+  * TE = 50 ms
+  * FOV = 192 × 192
+  * matrix = 64 × 64
+  * "notional resolution" 3 × 3 × 3 mm
+  * 164 volumes per run
+* T1 FLASH
+  * TR = 12 ms
+  * TE = 5.6 ms
+  * 1 mm3 resolution
+
+Missing information
+===================
+
+Slice order
+Slice gap in time
+Slice width
diff --git a/exploring_the_data.ipynb b/exploring_the_data.ipynb
