README.md

IBC Connectivity

Code repository for connectivity analysis on IBC data and others.

utils contains reusable functions for the analysis.

scripts contains the main scripts that use those utility functions.

Structural Connectivity (SC) Estimation

python scripts/estimate_sc.py

Functional Connectivity (FC) Estimation

python scripts/estimate_fc.py

FC Classification

python scripts/classify_fc.py

Similarity between FC and SC

python scripts/calculate_fcsc_similarity.py