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A bug - amino acid translation error at the closed exon boundary #2032

@senzhaocode

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@senzhaocode

Hello igv.js developer,

I reported a bug error related to the amino acid translation at the closed exon boundary (see attached screenshot - two bases (CG) at 3'-end of AR exon1 together with one base (T) at the 5'-end of AR exon2 is the codon (CGT), which should be translated as R (Arg). I think it was not visualized properly at the current version.

Image

In addition, I noted that the translation of codon to amino acid did not show properly when it comes to the reference sequence with small letters (see attached screenshot below). Could you fix it as well.

Image

Could you help fix these issues. Many thanks in advance!

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