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Workflow Automation: Implement workflow parameters schemas #7

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akachru-github opened this issue Aug 5, 2021 · 0 comments
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akachru-github commented Aug 5, 2021

  • Model Tee currently has all info on workflow parameters filled out as a part of the sheet
  • How can we handle this as a part of Workflow Automation?
    • Schema stored in workflow registry
    • Workflow Graph should encapsulate parameter knowledge
    • Activation function should contain parameters from the schema. This should call the correct reference files.

Expected Outcome

Define following schemas

  • Alignment

  • Sanger WXS

  • Sanger WGS

  • Mutect2

  • Open access filtering

  • Should be stored in workflow-registry

@rosibaj rosibaj transferred this issue from icgc-argo/roadmap Sep 16, 2021
@rosibaj rosibaj changed the title Workflow Automation: Handling workflow parameters Workflow Automation: Implement workflow parameters schemas Sep 16, 2021
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