@@ -16,18 +16,18 @@ RUN apk add --no-cache --purge -uU bash curl wget unzip gnupg openssl && \
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rm -rf /var/cache/apk/* /tmp/*
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WORKDIR /app
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- COPY --from=build /app/target /SQLLoader-jar-with-dependencies.jar .
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- COPY --from=build /app/target /CSVLoader-jar-with-dependencies.jar .
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- COPY --from=build /app/target /CSVLoaderNewSearch-jar-with-dependencies.jar .
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- COPY --from=build /app/target /CSVDumper-jar-with-dependencies.jar .
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- COPY --from=build /app/target /VCFLocalLoader-jar-with-dependencies.jar .
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- COPY --from=build /app/target /VariantMetadataLoader-jar-with-dependencies.jar .
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- COPY --from=build /app/target /UnifiedVCFLocalLoader-jar-with-dependencies.jar .
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- COPY --from=build /app/target /MultialleleCounter-jar-with-dependencies.jar .
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- COPY --from=build /app/target /RekeyDataset-jar-with-dependencies.jar .
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- COPY --from=build /app/target /RemoveConceptFromMetadata-jar-with-dependencies.jar .
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- COPY --from=build /app/target /HideAnnotationCategoryValue-jar-with-dependencies.jar .
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- COPY --from=build /app/target /SequentialLoader-jar-with-dependencies.jar .
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+ COPY --from=build /app/docker/pic-sure-hpds-etl /SQLLoader-jar-with-dependencies.jar .
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+ COPY --from=build /app/docker/pic-sure-hpds-etl /CSVLoader-jar-with-dependencies.jar .
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+ COPY --from=build /app/docker/pic-sure-hpds-etl /CSVLoaderNewSearch-jar-with-dependencies.jar .
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+ COPY --from=build /app/docker/pic-sure-hpds-etl /CSVDumper-jar-with-dependencies.jar .
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+ COPY --from=build /app/docker/pic-sure-hpds-etl /VCFLocalLoader-jar-with-dependencies.jar .
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+ COPY --from=build /app/docker/pic-sure-hpds-etl /VariantMetadataLoader-jar-with-dependencies.jar .
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+ COPY --from=build /app/docker/pic-sure-hpds-etl /UnifiedVCFLocalLoader-jar-with-dependencies.jar .
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+ COPY --from=build /app/docker/pic-sure-hpds-etl /MultialleleCounter-jar-with-dependencies.jar .
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+ COPY --from=build /app/docker/pic-sure-hpds-etl /RekeyDataset-jar-with-dependencies.jar .
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+ COPY --from=build /app/docker/pic-sure-hpds-etl /RemoveConceptFromMetadata-jar-with-dependencies.jar .
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+ COPY --from=build /app/docker/pic-sure-hpds-etl /HideAnnotationCategoryValue-jar-with-dependencies.jar .
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+ COPY --from=build /app/docker/pic-sure-hpds-etl /SequentialLoader-jar-with-dependencies.jar .
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COPY --from=build /app/docker/pic-sure-hpds-etl/create_key.sh .
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ENTRYPOINT ["sh" , "-c" , "java $JAVA_OPTS -Xmx${HEAPSIZE:-2048}m -jar ${LOADER_NAME:-CSVLoader}-jar-with-dependencies.jar" ]
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