The Pantograph tool is hosted at https://graph-genome.github.io/Schematize/.
The SARS-CoV-2 genomes are located on Arvados.
We are looking for biologists who will use the tool on a real research project to give us feedback about their experience. This will let us make improvements to the overall product that are most needed.
The official beta-test will run from June 6, 2020 to July 6, 2020. During this time scientists will use the Release 1.0 of the product and give feedback.
During the months of July and August 2020 we will roll the software to Release 1.1. The server will update to Pantograph 1.1.
Read the Pantograph User Guide located at schematize.github.io.
This guide will show you the basic operation of the software and help you know what to expect.
Select a problem that you wish to work on. If nothing comes to mind then try one of these problems. These are intended to get you familiar with the Pantograph software an teach you how to use it.
- Start with two individual samples and scroll through the display noting the similarity and divergence in the genetic sequence.
- Add several more sample and notice how the display changes.
- Look at a particular place in the sequence study ...
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When you want to give us feedback you will use the "schematize.org/issues” server.