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ljosaljosa
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Change license to GPL. Resolves CellProfiler#3.
The license of python-bioformats as a whole has to be GPL because loci_tools.jar is GPL licensed. The python files remain under the more permissive BSD license.
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‎COPYING

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‎README.rst

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Report bugs here: https://github.com/CellProfiler/python-bioformats/issues
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python-bioformats is licensed under the BSD license. See the
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accompanying file LICENSE for details.
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python-bioformats is licensed under the GNU General Public License
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(GPL). Many files are licensed under the more permissive BSD license.
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See the accompanying files COPYING and LICENSE for details.
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Copyright (c) 2009-2014 Broad Institute. All rights reserved.

‎bioformats/__init__.py

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'''Bioformats package - wrapper for loci.bioformats java code
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CellProfiler is distributed under the GNU General Public License,
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but this file is licensed under the more permissive BSD license.
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See the accompanying file LICENSE for details.
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# Python-bioformats is distributed under the GNU General Public
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# License, but this file is licensed under the more permissive BSD
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# license. See the accompanying file LICENSE for details.
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#
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# Copyright (c) 2009-2014 Broad Institute
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# All rights reserved.
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Copyright (c) 2003-2009 Massachusetts Institute of Technology
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Copyright (c) 2009-2013 Broad Institute
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All rights reserved.
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Please see the AUTHORS file for credits.
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'''Bioformats package - wrapper for loci.bioformats java code
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Website: http://www.cellprofiler.org
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'''
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__version__ = "$Revision$"
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‎bioformats/formatreader.py

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# Python-bioformats is distributed under the GNU General Public
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# License, but this file is licensed under the more permissive BSD
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# license. See the accompanying file LICENSE for details.
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#
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# Copyright (c) 2009-2014 Broad Institute
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# All rights reserved.
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'''formatreader.py - mechanism to wrap a bioformats ReaderWrapper and ImageReader
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Example:
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my_red_image, my_green_image, my_blue_image = \
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[cs.open_bytes(cs.getIndex(0,i,0)) for i in range(3)]
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CellProfiler is distributed under the GNU General Public License,
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but this file is licensed under the more permissive BSD license.
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See the accompanying file LICENSE for details.
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Copyright (c) 2003-2009 Massachusetts Institute of Technology
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Copyright (c) 2009-2014 Broad Institute
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All rights reserved.
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Please see the AUTHORS file for credits.
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Website: http://www.cellprofiler.org'
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'''
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__version__ = "$Revision$"

‎bioformats/formatwriter.py

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# Python-bioformats is distributed under the GNU General Public
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# License, but this file is licensed under the more permissive BSD
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# license. See the accompanying file LICENSE for details.
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#
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# Copyright (c) 2009-2014 Broad Institute
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# All rights reserved.
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'''formatwriter.py - mechanism to wrap a bioformats WriterWrapper and ImageWriter
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The following file formats can be written using Bio-Formats:
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and is especially useful for formats that do not support multiple images per
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file.
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CellProfiler is distributed under the GNU General Public License,
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but this file is licensed under the more permissive BSD license.
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See the accompanying file LICENSE for details.
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Copyright (c) 2003-2009 Massachusetts Institute of Technology
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Copyright (c) 2009-2014 Broad Institute
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All rights reserved.
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Please see the AUTHORS file for credits.
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Website: http://www.cellprofiler.org
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'''
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__version__ = "$Revision$"

‎bioformats/log4j.py

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# Python-bioformats is distributed under the GNU General Public
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# License, but this file is licensed under the more permissive BSD
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# license. See the accompanying file LICENSE for details.
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#
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# Copyright (c) 2009-2014 Broad Institute
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# All rights reserved.
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import unittest
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import javabridge
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‎bioformats/metadatatools.py

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''' metadatatools.py - mechanism to wrap some bioformats metadata classes
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CellProfiler is distributed under the GNU General Public License,
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but this file is licensed under the more permissive BSD license.
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See the accompanying file LICENSE for details.
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# Python-bioformats is distributed under the GNU General Public
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# License, but this file is licensed under the more permissive BSD
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# license. See the accompanying file LICENSE for details.
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#
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# Copyright (c) 2009-2014 Broad Institute
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# All rights reserved.
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Copyright (c) 2003-2009 Massachusetts Institute of Technology
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Copyright (c) 2009-2014 Broad Institute
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All rights reserved.
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Please see the AUTHORS file for credits.
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''' metadatatools.py - mechanism to wrap some bioformats metadata classes
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Website: http://www.cellprofiler.org
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'''
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__version__ = "$Revision$"

‎bioformats/noseplugin.py

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# CellProfiler is distributed under the GNU General Public License.
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# See the accompanying file LICENSE for details.
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# Python-bioformats is distributed under the GNU General Public
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# License, but this file is licensed under the more permissive BSD
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# license. See the accompanying file LICENSE for details.
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#
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# Copyright (c) 2003-2009 Massachusetts Institute of Technology
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# Copyright (c) 2009-2013 Broad Institute
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#
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# Please see the AUTHORS file for credits.
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#
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# Website: http://www.cellprofiler.org
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# Copyright (c) 2009-2014 Broad Institute
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# All rights reserved.
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import logging
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from nose.plugins import Plugin

‎bioformats/omexml.py

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# Python-bioformats is distributed under the GNU General Public
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# License, but this file is licensed under the more permissive BSD
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# license. See the accompanying file LICENSE for details.
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#
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# Copyright (c) 2009-2014 Broad Institute
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# All rights reserved.
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"""omexml.py read and write OME xml
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"""
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# CellProfiler is distributed under the GNU General Public License.
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# See the accompanying file LICENSE for details.
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#
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# Developed by the Broad Institute
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#
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# Copyright (c) 2003-2009 Massachusetts Institute of Technology
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# Copyright (c) 2003-2013 Broad Institute
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# All rights reserved.
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#
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# Please see the AUTHORS file for credits.
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#
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# Website: http://www.cellprofiler.org
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#
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import xml.etree.ElementTree
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from xml.etree import cElementTree as ElementTree
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from cStringIO import StringIO

‎bioformats/tests/__init__.py

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'''
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CellProfiler is distributed under the GNU General Public License,
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but this file is licensed under the more permissive BSD license.
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See the accompanying file LICENSE for details.
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Copyright (c) 2003-2009 Massachusetts Institute of Technology
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Copyright (c) 2009-2013 Broad Institute
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All rights reserved.
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Please see the AUTHORS file for credits.
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Website: http://www.cellprofiler.org
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'''
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