pyproject.toml

[project]
name = "ga4gh.gks.metaschema"
authors = [
    {name = "Alex Wagner", email = "alex.wagner@nationwidechildrens.org"},
]
readme = "README.md"
description = "GA4GH Genomic Knowledge Standards meta-schema tools"
license = {file = "LICENSE"}
classifiers = [
    "Development Status :: 3 - Alpha",
    "Intended Audience :: Developers",
    "Intended Audience :: Healthcare Industry",
    "Intended Audience :: Science/Research",
    "License :: OSI Approved :: Apache Software License",
    "Operating System :: OS Independent",
    "Programming Language :: Python",
    "Programming Language :: Python :: 3",
    "Programming Language :: Python :: 3.12",
    "Topic :: Scientific/Engineering :: Bio-Informatics",
    "Topic :: Scientific/Engineering :: Medical Science Apps.",
]
keywords = [
    "bioinformatics",
    "ga4gh",
    "genomics",
    "hgvs",
    "spdi",
    "variation"
]
requires-python = ">=3.12"
dependencies = [
    "pyyaml",
    "Jinja2"
]
dynamic = ["version"]

[project.optional-dependencies]
dev = [
    "pytest",
    "ruff==0.7.2"
]

[project.urls]
Homepage = "https://github.com/ga4gh/gks-metaschema"
Documentation = "https://github.com/ga4gh/gks-metaschema"
Changelog = "https://github.com/ga4gh/gks-metaschema/releases"
Source = "https://github.com/ga4gh/gks-metaschema"
"Bug Tracker" = "https://github.com/ga4gh/gks-metaschema/issues"

[tool.setuptools_scm]

[project.scripts]
jsy2js = "ga4gh.gks.metaschema.scripts.jsy2js:cli"
source2jsy = "ga4gh.gks.metaschema.scripts.source2jsy:cli"
y2t = "ga4gh.gks.metaschema.scripts.y2t:cli"
source2mergedjsy = "ga4gh.gks.metaschema.scripts.source2mergedjsy:cli"
source2splitjs = "ga4gh.gks.metaschema.scripts.source2splitjs:cli"
source2classes = "ga4gh.gks.metaschema.scripts.source2classes:cli"

[build-system]
requires = ["setuptools>=65.3", "setuptools_scm>=8"]
build-backend = "setuptools.build_meta"


[tool.ruff]
line-length = 120
target-version = "py312"

[tool.ruff.lint]
select = [
    "C",
    "F",
    "I",
    "E",
    "W"
]
fixable = ["ALL"]
ignore = ["C901"]

[tool.ruff.format]
# Like Black, use double quotes for strings.
quote-style = "double"
# Like Black, indent with spaces, rather than tabs.
indent-style = "space"
# Like Black, respect magic trailing commas.
skip-magic-trailing-comma = false