GDI_Addition_IDTK-Contentathon (#383)

* Added contributors

* Added text to clinical data collection

* Added text to Data linkage

* Added tool to tool_and_resource_list.yml

* Added link for tool ohdsi

* Added contributors

* Added text and links to Sample collection and processing

* Added 'General' to Considerations

* Added text and links to Assessment of data quality and data preprocessing

* Added considerations

* Added Human data removal from pathogen sequencing part

* Added text to Bioinformatics tools for quality control

* Solved conflict and added peddy tool

* Updated qc socioeconomic data

* Added Quality labels

* fixed typo

* added authors

* updated preprocessing general considerations

* Updated preprocessing approaches and softwares

* Added analysis approaches

* Updated postprocessing approaches

* Added bacterial outbreak

* Added viral outbreak analysis

* added contributor

* added references and fixed format

* added missing tools

* updated contributions

* fixed indentation

* Fixed description witg colon

* Fixed tools ids to be in kebab-case

* Added link to GitHub repo instead of instructions

* Fixed some tool URLs

* Deleted duplicated tool (Centrifuge)

* Fixed some more tool URLs

* Fixed some more tool URLs

* Changed name of validate and data.validator tools

* Changed case in soapnuke tool reference

* Modified tool id for validate and data.validator

* Reverted change for IRMA URL. There is no main repo available

* Reverted change for rseqc tool URL. Not an original repo

* Fixed IRMA URL

* Removed capital from dragonflye tool

* Removed capital from amrfinderplus tool

* Fixed tool name for dlookr

* Formatted paper links

* Updated CONTRIBUTORS.yaml

---------

Co-authored-by: jaimeozaez <[email protected]>

Author: svarona

_data/CONTRIBUTORS.yaml

@@ -231,10 +231,10 @@ Francisco Estupiñán-Romero:
   orcid: 0000-0002-6285-8120
   affiliation: IACS
 Marjan Meurisse:
-  git: 
-  email: 
+  git: MarjanMeurisse
+  email: [email protected]
   orcid: 0000-0002-4409-0664
-  affiliation: Sciensano
+  affiliation: UCLouvain
 Enrique Bernal-Delgado:
   git: 
   email: 
@@ -308,3 +308,66 @@ Francesco Messina:
   git: INMIbioinfo
   affiliation: IRCCS (INMI)
   Email: [email protected]
+Andreas Scherer:
+  git: schererFIMM
+  email: [email protected]
+  orcid: 0000-0002-4254-7122
+  affiliation: University of Helsinki, Finland
+Dilza Campos:
+  orcid: 0009-0005-0193-5224  
+  git: dilzacampos
+  email: [email protected]
+  affiliation: Vlaams Instituut voor Biotechnologie (VIB)
+Abeer Fadda:
+  orcid: 0000-0002-8489-1335
+  git: afadda91
+  email: [email protected]
+  affiliation: EGA-CRG
+Sarai Varona:
+  git: svarona
+  email: [email protected]
+  orcid: 0000-0002-2245-210X
+  role: editor
+  affiliation: ISCIII / ELIXIR-ES
+Jaime Ozáez:
+  git: jaimeozaez
+  email: [email protected]
+  orcid: 0009-0006-9314-9921
+  role: editor
+  affiliation: ISCIII / ELIXIR-ES
+Isabel Cuesta:
+  git: icuesta
+  email: [email protected]
+  orcid: 0000-0002-7911-9041
+  role: editor
+  affiliation: ISCIII / ELIXIR-ES
+Sara Monzón:
+  git: saramonzon
+  email: [email protected]
+  orcid: 0000-0002-0740-6324
+  role: editor
+  affiliation: ISCIII / ELIXIR-ES
+Emi Arjona:
+  git: emiarbol
+  email: [email protected]
+  orcid: 0000-0002-0753-3657
+  role: editor
+  affiliation: ISCIII / ELIXIR-ES
+Juan Ledesma:
+  git: juanledesma78
+  email: [email protected]
+  orcid: 0000-0002-0871-5065
+  role: editor
+  affiliation: ISCIII / ELIXIR-ES
+Daniel Valle-Millares:
+  git: Daniel-VM
+  email: [email protected]
+  orcid: 0000-0002-5205-855X
+  role: editor
+  affiliation: CIBERINFEC
+Pablo Mata:
+  git: Shettland
+  email: [email protected]
+  orcid: 0009-0001-6887-0382
+  role: editor
+  affiliation: ISCIII / ELIXIR-ES