Merge pull request #398 from villegar/v6.3.3-dev

Addresses CRAN feedback for submission

Author: villegar

DESCRIPTION

@@ -4,7 +4,7 @@ Description: Base 'DataSHIELD' functions for the server side. 'DataSHIELD' is a
     you to do non-disclosive federated analysis on sensitive data. 'DataSHIELD' analytic functions have
     been designed to only share non disclosive summary statistics, with built in automated output
     checking based on statistical disclosure control. With data sites setting the threshold values for
-    the automated output checks.
+    the automated output checks. For more details, see 'citation("dsBase")'.
 Version: 6.3.3
 Authors@R: c(person(given = "Paul",
                     family = "Burton",

inst/CITATION

@@ -0,0 +1,134 @@
+bibentry("Manual",
+         other = unlist(citation(auto = meta), recursive = FALSE))
+         
+bibentry(
+  bibtype  = "Article",
+  title    = "{DataSHIELD: taking the analysis to the data, not the data to the analysis}",
+  author   = c(
+    person("Amadou", "Gaye"),  
+    person("Yannick", "Marcon"),  
+    person("Julia", "Isaeva"),  
+    person("Philippe", "{LaFlamme}"),  
+    person("Andrew", "Turner"),  
+    person("Elinor M", "Jones"),  
+    person("Joel", "Minion"),  
+    person("Andrew W", "Boyd"),  
+    person("Christopher J", "Newby"),  
+    person("Marja-Liisa", "Nuotio"),  
+    person("Rebecca", "Wilson"),  
+    person("Oliver", "Butters"),  
+    person("Barnaby", "Murtagh"),  
+    person("Ipek", "Demir"),  
+    person("Dany", "Doiron"),  
+    person("Lisette", "Giepmans"),  
+    person("Susan E", "Wallace"),  
+    person("Isabelle", "Budin-Lj{\\o}sne"),  
+    person("Carsten", "{Oliver Schmidt}"),  
+    person("Paolo", "Boffetta"),  
+    person("Mathieu", "Boniol"),  
+    person("Maria", "Bota"),  
+    person("Kim W", "Carter"),  
+    person("Nick", "{deKlerk}"),  
+    person("Chris", "Dibben"),  
+    person("Richard W", "Francis"),  
+    person("Tero", "Hiekkalinna"),  
+    person("Kristian", "Hveem"),  
+    person("Kirsti", "Kval{\\o}y"),  
+    person("Sean", "Millar"),  
+    person("Ivan J", "Perry"),  
+    person("Annette", "Peters"),  
+    person("Catherine M", "Phillips"),  
+    person("Frank", "Popham"),  
+    person("Gillian", "Raab"),  
+    person("Eva", "Reischl"),  
+    person("Nuala", "Sheehan"),  
+    person("Melanie", "Waldenberger"),  
+    person("Markus", "Perola"),  
+    person("Edwin", "{van den Heuvel}"),  
+    person("John", "Macleod"),  
+    person("Bartha M", "Knoppers"),  
+    person("Ronald P", "Stolk"),  
+    person("Isabel", "Fortier"),  
+    person("Jennifer R", "Harris"),  
+    person("Bruce H R", "Woffenbuttel"),  
+    person("Madeleine J", "Murtagh"),  
+    person("Vincent", "Ferretti"),  
+    person("Paul R", "Burton")
+  ),
+  journal  = "International Journal of Epidemiology",
+  year     = "2014",
+  volume   = "43",
+  number   = "6",
+  pages    = "1929--1944",
+  doi      = "10.1093/ije/dyu188",
+)
+
+bibentry(
+  bibtype  = "Article",
+  title    = "{DataSHIELD – New Directions and Dimensions}",
+  author   = c(
+    person("Rebecca C.", "Wilson"), 
+    person("Oliver", "W. Butters"), 
+    person("Demetris", "Avraam"), 
+    person("James", "Baker"), 
+    person("Jonathan A.", "Tedds"), 
+    person("Andrew", "Turner"), 
+    person("Madeleine", "Murtagh"), 
+    person("Paul", "R. Burton")
+  ),
+  journal  = "Data Science Journal",
+  year     = "2017",
+  volume   = "16",
+  number   = "21",
+  pages    = "1--21",
+  doi      = "10.5334/dsj-2017-021"
+)
+
+bibentry(
+  bibtype  = "Article",
+  title    = "{DataSHIELD: mitigating disclosure risk in a multi-site federated analysis platform}",
+  author   = c(
+    person("Demetris", "Avraam"),
+    person("Rebecca C", "Wilson"),
+    person("Noemi", "{Aguirre Chan}"),
+    person("Soumya", "Banerjee"), 
+    person("Tom R P", "Bishop"), 
+    person("Olly", "Butters"), 
+    person("Tim", "Cadman"), 
+    person("Luise", "Cederkvist"), 
+    person("Liesbeth", "Duijts"), 
+    person("Xavier", "{Escrib{\\a`a} Montagut}"), 
+    person("Hugh", "Garner"), 
+    person("Gon{\\c c}alo", "Gon{\\c c}alves"), 
+    person("Juan R", "Gonz{\\a'a}lez"), 
+    person("Sido", "Haakma"), 
+    person("Mette", "Hartlev"), 
+    person("Jan", "Hasenauer"), 
+    person("Manuel", "Huth"), 
+    person("Eleanor", "Hyde"), 
+    person("Vincent W V", "Jaddoe"), 
+    person("Yannick", "Marcon"), 
+    person("Michaela Th", "Mayrhofer"), 
+    person("Fruzsina", "Molnar-Gabor"), 
+    person("Andrei Scott", "Morgan"), 
+    person("Madeleine", "Murtagh"), 
+    person("Marc", "Nestor"), 
+    person("Anne-Marie", "{Nybo Andersen}"), 
+    person("Simon", "Parker"), 
+    person("Angela", "{Pinot de Moira}"), 
+    person("Florian", "Schwarz"), 
+    person("Katrine", "Strandberg-Larsen"), 
+    person("Morris AvSwertz"), 
+    person("Marieke", "Welten"), 
+    person("Stuart", "Wheater"), 
+    person("Paul", "Burton")
+  ),
+  journal  = "Bioinformatics Advances",
+  year     = "2024",
+  volume   = "5",
+  number   = "1",
+  pages    = "1--21",
+  doi      = "10.1093/bioadv/vbaf046",
+  editor   = person("Thomas", "Lengauer"),
+  publisher = "Oxford University Press (OUP)"
+)