Antimicrobial_Peptide_QSAR.ipynb

{
  "nbformat": 4,
  "nbformat_minor": 0,
  "metadata": {
    "colab": {
      "name": "Antimicrobial-Peptide-QSAR.ipynb",
      "provenance": [],
      "collapsed_sections": [],
      "toc_visible": true
    },
    "kernelspec": {
      "name": "python3",
      "display_name": "Python 3"
    }
  },
  "cells": [
    {
      "cell_type": "markdown",
      "metadata": {
        "id": "OyuUpByeMFCW"
      },
      "source": [
        "# **Predicting Activity of Short Antimicrobial Peptides**\n",
        "\n",
        "Jupyter notebook by [Chanin Nantasenamat](https://medium.com/@chanin.nantasenamat) (aka [Data Professor](http://youtube.com/dataprofessor)\n",
        "\n",
        "Dataset:\n",
        "[Paper](https://www.cell.com/molecular-therapy-family/nucleic-acids/fulltext/S2162-2531(20)30132-3) | [Dataset](https://cbbio.online/AxPEP/?action=dataset)"
      ]
    },
    {
      "cell_type": "markdown",
      "metadata": {
        "id": "2E2XwwoUWbtw"
      },
      "source": [
        "# **Install conda**"
      ]
    },
    {
      "cell_type": "code",
      "metadata": {
        "colab": {
          "base_uri": "https://localhost:8080/"
        },
        "id": "jfYwjDE9Wewj",
        "outputId": "6aafec95-a857-4089-9217-27996f80446e"
      },
      "source": [
        "################################################################################\n",
        "# INSTALL CONDA ON GOOGLE COLAB\n",
        "################################################################################\n",
        "! wget https://repo.anaconda.com/miniconda/Miniconda3-py37_4.8.2-Linux-x86_64.sh\n",
        "! chmod +x Miniconda3-py37_4.8.2-Linux-x86_64.sh\n",
        "! bash ./Miniconda3-py37_4.8.2-Linux-x86_64.sh -b -f -p /usr/local\n",
        "import sys\n",
        "sys.path.append('/usr/local/lib/python3.7/site-packages/')"
      ],
      "execution_count": null,
      "outputs": [
        {
          "output_type": "stream",
          "text": [
            "--2021-02-12 17:01:32--  https://repo.anaconda.com/miniconda/Miniconda3-py37_4.8.2-Linux-x86_64.sh\n",
            "Resolving repo.anaconda.com (repo.anaconda.com)... 104.16.130.3, 104.16.131.3, 2606:4700::6810:8203, ...\n",
            "Connecting to repo.anaconda.com (repo.anaconda.com)|104.16.130.3|:443... connected.\n",
            "HTTP request sent, awaiting response... 200 OK\n",
            "Length: 85055499 (81M) [application/x-sh]\n",
            "Saving to: ‘Miniconda3-py37_4.8.2-Linux-x86_64.sh.1’\n",
            "\n",
            "Miniconda3-py37_4.8 100%[===================>]  81.12M   105MB/s    in 0.8s    \n",
            "\n",
            "2021-02-12 17:01:33 (105 MB/s) - ‘Miniconda3-py37_4.8.2-Linux-x86_64.sh.1’ saved [85055499/85055499]\n",
            "\n",
            "PREFIX=/usr/local\n",
            "Unpacking payload ...\n",
            "Collecting package metadata (current_repodata.json): - \b\b\\ \b\bdone\n",
            "Solving environment: / \b\b- \b\b\\ \b\b| \b\bdone\n",
            "\n",
            "## Package Plan ##\n",
            "\n",
            "  environment location: /usr/local\n",
            "\n",
            "  added / updated specs:\n",
            "    - _libgcc_mutex==0.1=main\n",
            "    - asn1crypto==1.3.0=py37_0\n",
            "    - ca-certificates==2020.1.1=0\n",
            "    - certifi==2019.11.28=py37_0\n",
            "    - cffi==1.14.0=py37h2e261b9_0\n",
            "    - chardet==3.0.4=py37_1003\n",
            "    - conda-package-handling==1.6.0=py37h7b6447c_0\n",
            "    - conda==4.8.2=py37_0\n",
            "    - cryptography==2.8=py37h1ba5d50_0\n",
            "    - idna==2.8=py37_0\n",
            "    - ld_impl_linux-64==2.33.1=h53a641e_7\n",
            "    - libedit==3.1.20181209=hc058e9b_0\n",
            "    - libffi==3.2.1=hd88cf55_4\n",
            "    - libgcc-ng==9.1.0=hdf63c60_0\n",
            "    - libstdcxx-ng==9.1.0=hdf63c60_0\n",
            "    - ncurses==6.2=he6710b0_0\n",
            "    - openssl==1.1.1d=h7b6447c_4\n",
            "    - pip==20.0.2=py37_1\n",
            "    - pycosat==0.6.3=py37h7b6447c_0\n",
            "    - pycparser==2.19=py37_0\n",
            "    - pyopenssl==19.1.0=py37_0\n",
            "    - pysocks==1.7.1=py37_0\n",
            "    - python==3.7.6=h0371630_2\n",
            "    - readline==7.0=h7b6447c_5\n",
            "    - requests==2.22.0=py37_1\n",
            "    - ruamel_yaml==0.15.87=py37h7b6447c_0\n",
            "    - setuptools==45.2.0=py37_0\n",
            "    - six==1.14.0=py37_0\n",
            "    - sqlite==3.31.1=h7b6447c_0\n",
            "    - tk==8.6.8=hbc83047_0\n",
            "    - tqdm==4.42.1=py_0\n",
            "    - urllib3==1.25.8=py37_0\n",
            "    - wheel==0.34.2=py37_0\n",
            "    - xz==5.2.4=h14c3975_4\n",
            "    - yaml==0.1.7=had09818_2\n",
            "    - zlib==1.2.11=h7b6447c_3\n",
            "\n",
            "\n",
            "The following packages will be DOWNGRADED:\n",
            "\n",
            "  ca-certificates                      2021.1.19-h06a4308_0 --> 2020.1.1-0\n",
            "  certifi                          2020.12.5-py37h06a4308_0 --> 2019.11.28-py37_0\n",
            "  conda                                4.9.2-py37h06a4308_0 --> 4.8.2-py37_0\n",
            "  openssl                                 1.1.1i-h27cfd23_0 --> 1.1.1d-h7b6447c_4\n",
            "\n",
            "\n",
            "Preparing transaction: - \b\bdone\n",
            "Executing transaction: | \b\b/ \b\bdone\n",
            "installation finished.\n",
            "WARNING:\n",
            "    You currently have a PYTHONPATH environment variable set. This may cause\n",
            "    unexpected behavior when running the Python interpreter in Miniconda3.\n",
            "    For best results, please verify that your PYTHONPATH only points to\n",
            "    directories of packages that are compatible with the Python interpreter\n",
            "    in Miniconda3: /usr/local\n"
          ],
          "name": "stdout"
        }
      ]
    },
    {
      "cell_type": "markdown",
      "metadata": {
        "id": "-XUPajcl5Xug"
      },
      "source": [
        "# **Download and Install Pfeature**"
      ]
    },
    {
      "cell_type": "code",
      "metadata": {
        "colab": {
          "base_uri": "https://localhost:8080/"
        },
        "id": "t5809Cl51Ogn",
        "outputId": "a39ca64d-9c86-41b5-ad8e-99e9c76037ab"
      },
      "source": [
        "! wget https://github.com/raghavagps/Pfeature/raw/master/PyLib/Pfeature.zip"
      ],
      "execution_count": null,
      "outputs": [
        {
          "output_type": "stream",
          "text": [
            "--2021-02-12 17:01:48--  https://github.com/raghavagps/Pfeature/raw/master/PyLib/Pfeature.zip\n",
            "Resolving github.com (github.com)... 140.82.114.4\n",
            "Connecting to github.com (github.com)|140.82.114.4|:443... connected.\n",
            "HTTP request sent, awaiting response... 302 Found\n",
            "Location: https://raw.githubusercontent.com/raghavagps/Pfeature/master/PyLib/Pfeature.zip [following]\n",
            "--2021-02-12 17:01:48--  https://raw.githubusercontent.com/raghavagps/Pfeature/master/PyLib/Pfeature.zip\n",
            "Resolving raw.githubusercontent.com (raw.githubusercontent.com)... 185.199.109.133, 185.199.111.133, 185.199.108.133, ...\n",
            "Connecting to raw.githubusercontent.com (raw.githubusercontent.com)|185.199.109.133|:443... connected.\n",
            "HTTP request sent, awaiting response... 200 OK\n",
            "Length: 511222 (499K) [application/zip]\n",
            "Saving to: ‘Pfeature.zip.1’\n",
            "\n",
            "Pfeature.zip.1      100%[===================>] 499.24K  --.-KB/s    in 0.05s   \n",
            "\n",
            "2021-02-12 17:01:48 (10.7 MB/s) - ‘Pfeature.zip.1’ saved [511222/511222]\n",
            "\n"
          ],
          "name": "stdout"
        }
      ]
    },
    {
      "cell_type": "code",
      "metadata": {
        "colab": {
          "base_uri": "https://localhost:8080/"
        },
        "id": "TzCcA2aJ2MTA",
        "outputId": "6244f68f-45af-4c35-c0b3-5cfbb9d21bc0"
      },
      "source": [
        "! unzip Pfeature.zip"
      ],
      "execution_count": null,
      "outputs": [
        {
          "output_type": "stream",
          "text": [
            "Archive:  Pfeature.zip\n",
            "replace __MACOSX/._Pfeature? [y]es, [n]o, [A]ll, [N]one, [r]ename: no\n",
            "replace Pfeature/PKG-INFO? [y]es, [n]o, [A]ll, [N]one, [r]ename: A\n",
            "  inflating: Pfeature/PKG-INFO       \n",
            "  inflating: __MACOSX/Pfeature/._PKG-INFO  \n",
            "  inflating: Pfeature/.DS_Store      \n",
            "  inflating: __MACOSX/Pfeature/._.DS_Store  \n",
            "  inflating: Pfeature/README         \n",
            "  inflating: __MACOSX/Pfeature/._README  \n",
            "  inflating: Pfeature/setup.py       \n",
            "  inflating: __MACOSX/Pfeature/._setup.py  \n",
            "  inflating: Pfeature/Functions_Tables.pdf  \n",
            "  inflating: __MACOSX/Pfeature/._Functions_Tables.pdf  \n",
            "  inflating: __MACOSX/Pfeature/._build  \n",
            "  inflating: Pfeature/Pfeature_Descriptors.pdf  \n",
            "  inflating: __MACOSX/Pfeature/._Pfeature_Descriptors.pdf  \n",
            "  inflating: __MACOSX/Pfeature/._Pfeature  \n",
            "  inflating: __MACOSX/Pfeature/build/._lib  \n",
            "  inflating: Pfeature/Pfeature/bonds.csv  \n",
            "  inflating: Pfeature/Pfeature/pfeature.py  \n",
            "  inflating: Pfeature/Pfeature/AAIndexNames.csv  \n",
            "  inflating: Pfeature/Pfeature/aaindices.csv  \n",
            "  inflating: Pfeature/Pfeature/atom.csv  \n",
            "  inflating: Pfeature/Pfeature/PhysicoChemical.csv  \n",
            "  inflating: Pfeature/Pfeature/__init__.py  \n",
            "  inflating: __MACOSX/Pfeature/Pfeature/.___init__.py  \n",
            "  inflating: Pfeature/Pfeature/z_aaindex.csv  \n",
            "  inflating: Pfeature/Pfeature/aaindex.csv  \n",
            "  inflating: Pfeature/Pfeature/bin_di.csv  \n",
            "  inflating: Pfeature/Pfeature/Grantham.csv  \n",
            "  inflating: Pfeature/Pfeature/can_pat.csv  \n",
            "  inflating: Pfeature/Pfeature/aa_attr_group.csv  \n",
            "  inflating: Pfeature/Pfeature/Schneider-Wrede.csv  \n",
            "  inflating: Pfeature/Pfeature/data  \n",
            "  inflating: Pfeature/Pfeature/aaind.txt  \n",
            "  inflating: Pfeature/build/lib/Pfeature/bonds.csv  \n",
            "  inflating: Pfeature/build/lib/Pfeature/pfeature.py  \n",
            "  inflating: Pfeature/build/lib/Pfeature/AAIndexNames.csv  \n",
            "  inflating: Pfeature/build/lib/Pfeature/aaindices.csv  \n",
            "  inflating: Pfeature/build/lib/Pfeature/atom.csv  \n",
            "  inflating: Pfeature/build/lib/Pfeature/PhysicoChemical.csv  \n",
            "  inflating: Pfeature/build/lib/Pfeature/__init__.py  \n",
            "  inflating: __MACOSX/Pfeature/build/lib/Pfeature/.___init__.py  \n",
            "  inflating: Pfeature/build/lib/Pfeature/z_aaindex.csv  \n",
            "  inflating: Pfeature/build/lib/Pfeature/aaindex.csv  \n",
            "  inflating: Pfeature/build/lib/Pfeature/bin_di.csv  \n",
            "  inflating: Pfeature/build/lib/Pfeature/Grantham.csv  \n",
            "  inflating: Pfeature/build/lib/Pfeature/can_pat.csv  \n",
            "  inflating: Pfeature/build/lib/Pfeature/aa_attr_group.csv  \n",
            "  inflating: Pfeature/build/lib/Pfeature/Schneider-Wrede.csv  \n",
            "  inflating: Pfeature/build/lib/Pfeature/data  \n",
            "  inflating: Pfeature/build/lib/Pfeature/aaind.txt  \n"
          ],
          "name": "stdout"
        }
      ]
    },
    {
      "cell_type": "code",
      "metadata": {
        "id": "Db0F7cjQ1aZF",
        "colab": {
          "base_uri": "https://localhost:8080/"
        },
        "outputId": "f8820600-79a7-4f6d-93e1-75cc16dd4ae4"
      },
      "source": [
        "% cd Pfeature"
      ],
      "execution_count": null,
      "outputs": [
        {
          "output_type": "stream",
          "text": [
            "/content/Pfeature\n"
          ],
          "name": "stdout"
        }
      ]
    },
    {
      "cell_type": "code",
      "metadata": {
        "id": "Es6GHcJU2ncB",
        "colab": {
          "base_uri": "https://localhost:8080/"
        },
        "outputId": "d5f6313c-e236-4d88-9ae3-c30fb5a1a6ff"
      },
      "source": [
        "! python setup.py install"
      ],
      "execution_count": null,
      "outputs": [
        {
          "output_type": "stream",
          "text": [
            "/usr/local/lib/python3.7/distutils/dist.py:274: UserWarning: Unknown distribution option: 'zip_safe'\n",
            "  warnings.warn(msg)\n",
            "running install\n",
            "running build\n",
            "running build_py\n",
            "copying Pfeature/pfeature.py -> build/lib/Pfeature\n",
            "copying Pfeature/__init__.py -> build/lib/Pfeature\n",
            "running install_lib\n",
            "running install_egg_info\n",
            "Removing /usr/local/lib/python3.7/site-packages/Pfeature-1.0-py3.7.egg-info\n",
            "Writing /usr/local/lib/python3.7/site-packages/Pfeature-1.0-py3.7.egg-info\n"
          ],
          "name": "stdout"
        }
      ]
    },
    {
      "cell_type": "markdown",
      "metadata": {
        "id": "RyAd8gHWP2IB"
      },
      "source": [
        "# **Install CD-HIT**"
      ]
    },
    {
      "cell_type": "code",
      "metadata": {
        "id": "Q3UMOU6yTYwk",
        "colab": {
          "base_uri": "https://localhost:8080/"
        },
        "outputId": "ee9422ff-1282-427b-8715-0b5c594b21ff"
      },
      "source": [
        "! conda install -c bioconda cd-hit -y"
      ],
      "execution_count": null,
      "outputs": [
        {
          "output_type": "stream",
          "text": [
            "Collecting package metadata (current_repodata.json): - \b\b\\ \b\b| \b\b/ \b\b- \b\b\\ \b\b| \b\b/ \b\b- \b\b\\ \b\b| \b\b/ \b\b- \b\b\\ \b\b| \b\b/ \b\b- \b\b\\ \b\b| \b\b/ \b\b- \b\b\\ \b\bdone\n",
            "Solving environment: / \b\b- \b\b\\ \b\bdone\n",
            "\n",
            "## Package Plan ##\n",
            "\n",
            "  environment location: /usr/local\n",
            "\n",
            "  added / updated specs:\n",
            "    - cd-hit\n",
            "\n",
            "\n",
            "The following packages will be UPDATED:\n",
            "\n",
            "  ca-certificates                                2020.1.1-0 --> 2021.1.19-h06a4308_0\n",
            "  certifi                                 2019.11.28-py37_0 --> 2020.12.5-py37h06a4308_0\n",
            "  conda                                        4.8.2-py37_0 --> 4.9.2-py37h06a4308_0\n",
            "  openssl                                 1.1.1d-h7b6447c_4 --> 1.1.1i-h27cfd23_0\n",
            "\n",
            "\n",
            "Preparing transaction: / \b\bdone\n",
            "Verifying transaction: \\ \b\b| \b\bdone\n",
            "Executing transaction: - \b\bdone\n"
          ],
          "name": "stdout"
        }
      ]
    },
    {
      "cell_type": "markdown",
      "metadata": {
        "id": "mZYPeKm97sFk"
      },
      "source": [
        "# **Load peptide dataset**"
      ]
    },
    {
      "cell_type": "code",
      "metadata": {
        "colab": {
          "base_uri": "https://localhost:8080/"
        },
        "id": "XGNZ-_0JB68Z",
        "outputId": "fe7a84e0-eb9d-47b3-9aa2-06ae9417eaf5"
      },
      "source": [
        "! wget https://raw.githubusercontent.com/dataprofessor/AMP/main/train_po.fasta"
      ],
      "execution_count": null,
      "outputs": [
        {
          "output_type": "stream",
          "text": [
            "--2021-02-12 17:02:34--  https://raw.githubusercontent.com/dataprofessor/AMP/main/train_po.fasta\n",
            "Resolving raw.githubusercontent.com (raw.githubusercontent.com)... 185.199.111.133, 185.199.110.133, 185.199.108.133, ...\n",
            "Connecting to raw.githubusercontent.com (raw.githubusercontent.com)|185.199.111.133|:443... connected.\n",
            "HTTP request sent, awaiting response... 200 OK\n",
            "Length: 52619 (51K) [text/plain]\n",
            "Saving to: ‘train_po.fasta.1’\n",
            "\n",
            "train_po.fasta.1    100%[===================>]  51.39K  --.-KB/s    in 0.01s   \n",
            "\n",
            "2021-02-12 17:02:34 (4.13 MB/s) - ‘train_po.fasta.1’ saved [52619/52619]\n",
            "\n"
          ],
          "name": "stdout"
        }
      ]
    },
    {
      "cell_type": "code",
      "metadata": {
        "colab": {
          "base_uri": "https://localhost:8080/"
        },
        "id": "FA6Vue0LD0_t",
        "outputId": "c33479e5-20ac-43d1-c49a-7d96305229c8"
      },
      "source": [
        "! wget https://raw.githubusercontent.com/dataprofessor/AMP/main/train_ne.fasta"
      ],
      "execution_count": null,
      "outputs": [
        {
          "output_type": "stream",
          "text": [
            "--2021-02-12 17:02:34--  https://raw.githubusercontent.com/dataprofessor/AMP/main/train_ne.fasta\n",
            "Resolving raw.githubusercontent.com (raw.githubusercontent.com)... 185.199.108.133, 185.199.109.133, 185.199.110.133, ...\n",
            "Connecting to raw.githubusercontent.com (raw.githubusercontent.com)|185.199.108.133|:443... connected.\n",
            "HTTP request sent, awaiting response... 200 OK\n",
            "Length: 57206 (56K) [text/plain]\n",
            "Saving to: ‘train_ne.fasta.1’\n",
            "\n",
            "train_ne.fasta.1    100%[===================>]  55.87K  --.-KB/s    in 0.01s   \n",
            "\n",
            "2021-02-12 17:02:34 (4.47 MB/s) - ‘train_ne.fasta.1’ saved [57206/57206]\n",
            "\n"
          ],
          "name": "stdout"
        }
      ]
    },
    {
      "cell_type": "code",
      "metadata": {
        "colab": {
          "base_uri": "https://localhost:8080/"
        },
        "id": "685FLTT_AkBB",
        "outputId": "9de02256-edf4-4e13-cb75-af06a4c294af"
      },
      "source": [
        "! cat train_ne.fasta"
      ],
      "execution_count": null,
      "outputs": [
        {
          "output_type": "stream",
          "text": [
            ">nonamp5_30_1\n",
            "FPPWE\n",
            ">nonamp5_30_2\n",
            "FPPWM\n",
            ">nonamp5_30_3\n",
            "IEFFT\n",
            ">nonamp5_30_4\n",
            "RYLPT\n",
            ">nonamp5_30_5\n",
            "EDRTY\n",
            ">nonamp5_30_6\n",
            "FPPWVL\n",
            ">nonamp5_30_7\n",
            "GAPMFV\n",
            ">nonamp5_30_8\n",
            "KPPWRL\n",
            ">nonamp5_30_9\n",
            "NPTNLH\n",
            ">nonamp5_30_10\n",
            "DTVNAA\n",
            ">nonamp5_30_11\n",
            "MERQVL\n",
            ">nonamp5_30_12\n",
            "PIDPGV\n",
            ">nonamp5_30_13\n",
            "KPLWRL\n",
            ">nonamp5_30_14\n",
            "FGVLNFF\n",
            ">nonamp5_30_15\n",
            "GSEIQPR\n",
            ">nonamp5_30_16\n",
            "NNLDEIK\n",
            ">nonamp5_30_17\n",
            "VPPIGWF\n",
            ">nonamp5_30_18\n",
            "EAYAFGL\n",
            ">nonamp5_30_19\n",
            "TNDFMRF\n",
            ">nonamp5_30_20\n",
            "VIYIFAR\n",
            ">nonamp5_30_21\n",
            "DYMGWMDF\n",
            ">nonamp5_30_22\n",
            "GCVLLPWC\n",
            ">nonamp5_30_23\n",
            "MEDEGAGG\n",
            ">nonamp5_30_24\n",
            "SVQFKPRL\n",
            ">nonamp5_30_25\n",
            "DEVKIVLD\n",
            ">nonamp5_30_26\n",
            "SPPFAPRL\n",
            ">nonamp5_30_27\n",
            "TGVAWRIT\n",
            ">nonamp5_30_28\n",
            "PTHIKWGD\n",
            ">nonamp5_30_29\n",
            "MWPFPSDK\n",
            ">nonamp5_30_30\n",
            "EPFKISIHL\n",
            ">nonamp5_30_31\n",
            "GPDSSFLRL\n",
            ">nonamp5_30_32\n",
            "MAQDAITAV\n",
            ">nonamp5_30_33\n",
            "TLTSFGEWR\n",
            ">nonamp5_30_34\n",
            "CYIQNCPRG\n",
            ">nonamp5_30_35\n",
            "SQPSMRLRF\n",
            ">nonamp5_30_36\n",
            "TPTAFYGVR\n",
            ">nonamp5_30_37\n",
            "NPQQDFMRF\n",
            ">nonamp5_30_38\n",
            "MYKLLIINP\n",
            ">nonamp5_30_39\n",
            "AGQDGFMRF\n",
            ">nonamp5_30_40\n",
            "YDRYEVVYR\n",
            ">nonamp5_30_41\n",
            "CLIQDCPEG\n",
            ">nonamp5_30_42\n",
            "NQEGLFHGR\n",
            ">nonamp5_30_43\n",
            "GLVPPADKY\n",
            ">nonamp5_30_44\n",
            "QKKDKKDKF\n",
            ">nonamp5_30_45\n",
            "GYNRSFLRF\n",
            ">nonamp5_30_46\n",
            "PDYLQLARA\n",
            ">nonamp5_30_47\n",
            "TPSQDFMRF\n",
            ">nonamp5_30_48\n",
            "GLGPRPLRF\n",
            ">nonamp5_30_49\n",
            "QGLIPFPRV\n",
            ">nonamp5_30_50\n",
            "SGPGFMGVR\n",
            ">nonamp5_30_51\n",
            "CYINNCPVG\n",
            ">nonamp5_30_52\n",
            "MQNQRIRIR\n",
            ">nonamp5_30_53\n",
            "ARSDNFVRL\n",
            ">nonamp5_30_54\n",
            "DYPKLTFTTS\n",
            ">nonamp5_30_55\n",
            "GPPYQPLVPR\n",
            ">nonamp5_30_56\n",
            "MLVGKKVQTF\n",
            ">nonamp5_30_57\n",
            "SVVDGWTTFR\n",
            ">nonamp5_30_58\n",
            "AYSNLNYLRF\n",
            ">nonamp5_30_59\n",
            "SRDIVSVYDD\n",
            ">nonamp5_30_60\n",
            "TPSDGFMGMR\n",
            ">nonamp5_30_61\n",
            "PSPPGFSPFR\n",
            ">nonamp5_30_62\n",
            "NACSSDLNSK\n",
            ">nonamp5_30_63\n",
            "AIGPVADLHI\n",
            ">nonamp5_30_64\n",
            "WVDADLNGLR\n",
            ">nonamp5_30_65\n",
            "ASLVTSFEEA\n",
            ">nonamp5_30_66\n",
            "QDLDHVFMRF\n",
            ">nonamp5_30_67\n",
            "GPNPGFSPFR\n",
            ">nonamp5_30_68\n",
            "QKKDRFLGLF\n",
            ">nonamp5_30_69\n",
            "IVGGVSVAIE\n",
            ">nonamp5_30_70\n",
            "QFRPSYQIPP\n",
            ">nonamp5_30_71\n",
            "VTIGKEGTLT\n",
            ">nonamp5_30_72\n",
            "GLLSSLGLNL\n",
            ">nonamp5_30_73\n",
            "QHYSLEWKPG\n",
            ">nonamp5_30_74\n",
            "SHYAEGPGKN\n",
            ">nonamp5_30_75\n",
            "AYAQWVIIII\n",
            ">nonamp5_30_76\n",
            "MQTLPKERRY\n",
            ">nonamp5_30_77\n",
            "APPGFTPFRS\n",
            ">nonamp5_30_78\n",
            "DRVYVHPFYL\n",
            ">nonamp5_30_79\n",
            "GLLGLGYGGY\n",
            ">nonamp5_30_80\n",
            "AAGLFQFPRV\n",
            ">nonamp5_30_81\n",
            "GGCDGDRQDM\n",
            ">nonamp5_30_82\n",
            "QNWPRPQIPP\n",
            ">nonamp5_30_83\n",
            "EQGVGGDDGL\n",
            ">nonamp5_30_84\n",
            "HKTDSFVGLM\n",
            ">nonamp5_30_85\n",
            "GRGGSSNYVRL\n",
            ">nonamp5_30_86\n",
            "GSTGLIPFGRT\n",
            ">nonamp5_30_87\n",
            "PAPESGFIRDP\n",
            ">nonamp5_30_88\n",
            "SITKIKAREIL\n",
            ">nonamp5_30_89\n",
            "GASGLIPFPRL\n",
            ">nonamp5_30_90\n",
            "SANTKNDFMRF\n",
            ">nonamp5_30_91\n",
            "SLRKMHALGET\n",
            ">nonamp5_30_92\n",
            "QGGAGWPPIPP\n",
            ">nonamp5_30_93\n",
            "PVPDSSFLRDP\n",
            ">nonamp5_30_94\n",
            "AVPPRYGYTRG\n",
            ">nonamp5_30_95\n",
            "VPPGFTPFRVD\n",
            ">nonamp5_30_96\n",
            "FCTMIPIPRCY\n",
            ">nonamp5_30_97\n",
            "QGGPPRPQIPP\n",
            ">nonamp5_30_98\n",
            "GSSGMIPFPRV\n",
            ">nonamp5_30_99\n",
            "QPHPNEFVGLM\n",
            ">nonamp5_30_100\n",
            "LMRKDVDTLTD\n",
            ">nonamp5_30_101\n",
            "QGPSPRHPIPP\n",
            ">nonamp5_30_102\n",
            "SLLSLIRKLIT\n",
            ">nonamp5_30_103\n",
            "GSSGLISMTRV\n",
            ">nonamp5_30_104\n",
            "QNRHPPIPPAP\n",
            ">nonamp5_30_105\n",
            "RPPGFSPFRIY\n",
            ">nonamp5_30_106\n",
            "FPLPCAYKGTYC\n",
            ">nonamp5_30_107\n",
            "GLLDGLLGGLGL\n",
            ">nonamp5_30_108\n",
            "KDALEHTGFAPK\n",
            ">nonamp5_30_109\n",
            "TPPQPADNFIRF\n",
            ">nonamp5_30_110\n",
            "DVPKSDQFVGLM\n",
            ">nonamp5_30_111\n",
            "SPPAPFVPVPIN\n",
            ">nonamp5_30_112\n",
            "TYKKPPFNGSIF\n",
            ">nonamp5_30_113\n",
            "MDLSFTLSVVTA\n",
            ">nonamp5_30_114\n",
            "LRPAVIVRTKGK\n",
            ">nonamp5_30_115\n",
            "APVPGLSPFRVV\n",
            ">nonamp5_30_116\n",
            "DSPGGASDAQKQ\n",
            ">nonamp5_30_117\n",
            "DHLSHDVYSPRL\n",
            ">nonamp5_30_118\n",
            "VRPYLVAFYESH\n",
            ">nonamp5_30_119\n",
            "GHAKKDKKIQKK\n",
            ">nonamp5_30_120\n",
            "NFSCPPDWYAYD\n",
            ">nonamp5_30_121\n",
            "GSGADCFWKYCV\n",
            ">nonamp5_30_122\n",
            "MEFGNLTNLDVA\n",
            ">nonamp5_30_123\n",
            "SQISLRGSNLTI\n",
            ">nonamp5_30_124\n",
            "GGSSGLISVPRV\n",
            ">nonamp5_30_125\n",
            "MRFCWQKSIHGS\n",
            ">nonamp5_30_126\n",
            "QQWPRDPAPIPP\n",
            ">nonamp5_30_127\n",
            "DSPAGVSDAQKQ\n",
            ">nonamp5_30_128\n",
            "ILGTILGLLKSL\n",
            ">nonamp5_30_129\n",
            "DEGCLPDDSSRT\n",
            ">nonamp5_30_130\n",
            "EIQNAGLYAILR\n",
            ">nonamp5_30_131\n",
            "GGSSGLIAFPRL\n",
            ">nonamp5_30_132\n",
            "AEKLEPVLPLIV\n",
            ">nonamp5_30_133\n",
            "GGNTECFWKYCV\n",
            ">nonamp5_30_134\n",
            "TPVVNPPFLQQT\n",
            ">nonamp5_30_135\n",
            "FRPALIVRTKGK\n",
            ">nonamp5_30_136\n",
            "GLLDGLLGTLGL\n",
            ">nonamp5_30_137\n",
            "GSSGGLITFGRT\n",
            ">nonamp5_30_138\n",
            "QLASDDYGHMRF\n",
            ">nonamp5_30_139\n",
            "DEPKPDQFVGLM\n",
            ">nonamp5_30_140\n",
            "MDFNISGIGNVS\n",
            ">nonamp5_30_141\n",
            "GVQKSEVVITSA\n",
            ">nonamp5_30_142\n",
            "LENGLLRKPPMG\n",
            ">nonamp5_30_143\n",
            "ATPFGGSSYEGH\n",
            ">nonamp5_30_144\n",
            "IGGIISFFKRLF\n",
            ">nonamp5_30_145\n",
            "GAVSGLLTNLGL\n",
            ">nonamp5_30_146\n",
            "KPENENEEALHE\n",
            ">nonamp5_30_147\n",
            "GSLTGLISMPRT\n",
            ">nonamp5_30_148\n",
            "ILGTILGLLKGL\n",
            ">nonamp5_30_149\n",
            "QGWAWPRPQIPP\n",
            ">nonamp5_30_150\n",
            "GLLDALSGILGL\n",
            ">nonamp5_30_151\n",
            "ILCINVAGRRIC\n",
            ">nonamp5_30_152\n",
            "AGLPTEEKPPLL\n",
            ">nonamp5_30_153\n",
            "SITKIKAREILD\n",
            ">nonamp5_30_154\n",
            "FLPFLAKILTGVL\n",
            ">nonamp5_30_155\n",
            "FLPMIAKLLGGLL\n",
            ">nonamp5_30_156\n",
            "LLPIVGNLLNSLL\n",
            ">nonamp5_30_157\n",
            "SDIGISEPNFLRF\n",
            ">nonamp5_30_158\n",
            "EGGGNRGDPSGVC\n",
            ">nonamp5_30_159\n",
            "SAIDPNPDTPDSE\n",
            ">nonamp5_30_160\n",
            "STAGDTHLGGEDF\n",
            ">nonamp5_30_161\n",
            "NEEEKVKWQPDVP\n",
            ">nonamp5_30_162\n",
            "MKLLCWQKSIHGS\n",
            ">nonamp5_30_163\n",
            "ALFEESTVSAEPR\n",
            ">nonamp5_30_164\n",
            "EELRPEVLPDVSE\n",
            ">nonamp5_30_165\n",
            "DAQEKRQPWLPFG\n",
            ">nonamp5_30_166\n",
            "NFDEIDRSGFGFN\n",
            ">nonamp5_30_167\n",
            "FLPLIGRVLSGIL\n",
            ">nonamp5_30_168\n",
            "QAIVSKARRPYIL\n",
            ">nonamp5_30_169\n",
            "GLFDIIKNIFSGL\n",
            ">nonamp5_30_170\n",
            "NGGTSGLFAFPRV\n",
            ">nonamp5_30_171\n",
            "SCLEYGHSCWGAH\n",
            ">nonamp5_30_172\n",
            "FLPLIAGLLGKLF\n",
            ">nonamp5_30_173\n",
            "PYDRISNSAFSDF\n",
            ">nonamp5_30_174\n",
            "QLHVNKARRPYIL\n",
            ">nonamp5_30_175\n",
            "DNLKKRRRCADDD\n",
            ">nonamp5_30_176\n",
            "LLPILGNLLNGLL\n",
            ">nonamp5_30_177\n",
            "ATFFDPQPRLLAD\n",
            ">nonamp5_30_178\n",
            "FIGGIISLIKKLF\n",
            ">nonamp5_30_179\n",
            "FLPIVGKLLSGLL\n",
            ">nonamp5_30_180\n",
            "AEFGPSQPFKGAK\n",
            ">nonamp5_30_181\n",
            "FLPIPRPILLGLL\n",
            ">nonamp5_30_182\n",
            "QDKPFWPPPIYIM\n",
            ">nonamp5_30_183\n",
            "FLPFLASLLTKVL\n",
            ">nonamp5_30_184\n",
            "FVQWFSKFLGRIL\n",
            ">nonamp5_30_185\n",
            "HGVSGHGQHGVHG\n",
            ">nonamp5_30_186\n",
            "FYSAPTRDNVFEL\n",
            ">nonamp5_30_187\n",
            "DAHNEDEEHAEGS\n",
            ">nonamp5_30_188\n",
            "NPVLPCPVGSLYK\n",
            ">nonamp5_30_189\n",
            "IPLDPVAGYKEPA\n",
            ">nonamp5_30_190\n",
            "MYDESTGYSSALK\n",
            ">nonamp5_30_191\n",
            "AQVESVCPGVVSC\n",
            ">nonamp5_30_192\n",
            "KHSLPDLPYDYGA\n",
            ">nonamp5_30_193\n",
            "FLPIIGKLLSGLL\n",
            ">nonamp5_30_194\n",
            "QGRAPHPPIPPAP\n",
            ">nonamp5_30_195\n",
            "GWFDVVKHIASAV\n",
            ">nonamp5_30_196\n",
            "MADAEDIQPLVCD\n",
            ">nonamp5_30_197\n",
            "GDVVANPESVELK\n",
            ">nonamp5_30_198\n",
            "FQFVNPSDIVFGS\n",
            ">nonamp5_30_199\n",
            "YDDGSYKPHIYGF\n",
            ">nonamp5_30_200\n",
            "AELPQGLWVRPRL\n",
            ">nonamp5_30_201\n",
            "FLPLFASLIGKLL\n",
            ">nonamp5_30_202\n",
            "ILPLVGNLLNDLL\n",
            ">nonamp5_30_203\n",
            "QDKPFWSPPIYPV\n",
            ">nonamp5_30_204\n",
            "QRLGHQWAVGHLM\n",
            ">nonamp5_30_205\n",
            "MIYSTEVSNMAGV\n",
            ">nonamp5_30_206\n",
            "FLPIIAKLVSGLL\n",
            ">nonamp5_30_207\n",
            "TDTEFEAAGGGVR\n",
            ">nonamp5_30_208\n",
            "AGPVSKLVSGIGL\n",
            ">nonamp5_30_209\n",
            "APPGFTPFRSKAV\n",
            ">nonamp5_30_210\n",
            "FFGSVLKLIPKIL\n",
            ">nonamp5_30_211\n",
            "VLPLISMALGKLL\n",
            ">nonamp5_30_212\n",
            "GFKNVQLSTARGF\n",
            ">nonamp5_30_213\n",
            "FLPAIAGILSQLF\n",
            ">nonamp5_30_214\n",
            "QDKPFWDPPIYPV\n",
            ">nonamp5_30_215\n",
            "DLAGEIHGLSNVK\n",
            ">nonamp5_30_216\n",
            "FLPFLATLLSKVL\n",
            ">nonamp5_30_217\n",
            "VVSCADILAVAAR\n",
            ">nonamp5_30_218\n",
            "QKNDKKDRFYGLM\n",
            ">nonamp5_30_219\n",
            "QKKDKKDKFYGLM\n",
            ">nonamp5_30_220\n",
            "MTRVQFKHHHHPD\n",
            ">nonamp5_30_221\n",
            "GLFDIIKKIAESF\n",
            ">nonamp5_30_222\n",
            "NRQPSKYGLEETI\n",
            ">nonamp5_30_223\n",
            "ILGKFCDEIKRIV\n",
            ">nonamp5_30_224\n",
            "RLHQNGMPFSPRL\n",
            ">nonamp5_30_225\n",
            "GLLDMVTGLLGNL\n",
            ">nonamp5_30_226\n",
            "KKDGYPVEYDRAY\n",
            ">nonamp5_30_227\n",
            "QEKPYWPPPIYPM\n",
            ">nonamp5_30_228\n",
            "NEEEKVKWEPDVP\n",
            ">nonamp5_30_229\n",
            "GSGASGSMPATTS\n",
            ">nonamp5_30_230\n",
            "GLFDIIKKIAESI\n",
            ">nonamp5_30_231\n",
            "TSSGCPNFESLVR\n",
            ">nonamp5_30_232\n",
            "QKKDKKDRFYGLF\n",
            ">nonamp5_30_233\n",
            "SAIWFWMTPQSPK\n",
            ">nonamp5_30_234\n",
            "FIGGIISFFKRLF\n",
            ">nonamp5_30_235\n",
            "FLPLIGKVLSGIL\n",
            ">nonamp5_30_236\n",
            "TEFGPSQPFKGAK\n",
            ">nonamp5_30_237\n",
            "DAQEKRQPWIPFV\n",
            ">nonamp5_30_238\n",
            "FLPLILRKIVTAL\n",
            ">nonamp5_30_239\n",
            "ARKFFVGRNWPEL\n",
            ">nonamp5_30_240\n",
            "PYDRISGSAFSDF\n",
            ">nonamp5_30_241\n",
            "AIEVQTVTLIPGD\n",
            ">nonamp5_30_242\n",
            "ATTDSPATLTGVI\n",
            ">nonamp5_30_243\n",
            "TGVNYGQLGNNLP\n",
            ">nonamp5_30_244\n",
            "QSHISKARRPYIL\n",
            ">nonamp5_30_245\n",
            "AFCCPSGWSAYDQ\n",
            ">nonamp5_30_246\n",
            "FLPFLASLLSKVL\n",
            ">nonamp5_30_247\n",
            "QGGLPRPGPEIPP\n",
            ">nonamp5_30_248\n",
            "FLPILGKILGGLL\n",
            ">nonamp5_30_249\n",
            "QLYENKSRRPYIL\n",
            ">nonamp5_30_250\n",
            "IVPFLGPLLGLLT\n",
            ">nonamp5_30_251\n",
            "PFDRISNSAFSDF\n",
            ">nonamp5_30_252\n",
            "QGGGPQWAVGHFM\n",
            ">nonamp5_30_253\n",
            "QSFGNQWARGHFM\n",
            ">nonamp5_30_254\n",
            "FISAIASMLGKFL\n",
            ">nonamp5_30_255\n",
            "AYGEAANVFGAPK\n",
            ">nonamp5_30_256\n",
            "ASEDTAEAAAPSA\n",
            ">nonamp5_30_257\n",
            "QKKDKKDRFYGLM\n",
            ">nonamp5_30_258\n",
            "FIGGIISFIKKLF\n",
            ">nonamp5_30_259\n",
            "AQENETNESGSID\n",
            ">nonamp5_30_260\n",
            "AGGTSGLYAFPRV\n",
            ">nonamp5_30_261\n",
            "QGRPPHPPIPPAP\n",
            ">nonamp5_30_262\n",
            "PFDRISSSAFSDF\n",
            ">nonamp5_30_263\n",
            "KHFGKDSNFPFGT\n",
            ">nonamp5_30_264\n",
            "QDKPFWPPPIYPM\n",
            ">nonamp5_30_265\n",
            "VVSCADILTLAAR\n",
            ">nonamp5_30_266\n",
            "GIAEFLNYIKSKA\n",
            ">nonamp5_30_267\n",
            "AYELPELPYAYDA\n",
            ">nonamp5_30_268\n",
            "SGFVLKGYTKTSQ\n",
            ">nonamp5_30_269\n",
            "AAAPDIPIANVNA\n",
            ">nonamp5_30_270\n",
            "ILGLLKGISALLS\n",
            ">nonamp5_30_271\n",
            "AGEPANNEDRFNY\n",
            ">nonamp5_30_272\n",
            "QDKPFWSPPIYPH\n",
            ">nonamp5_30_273\n",
            "ILGLNTLGVSLAR\n",
            ">nonamp5_30_274\n",
            "FLPLLFGAISHLL\n",
            ">nonamp5_30_275\n",
            "AVPAVRKTNETLD\n",
            ">nonamp5_30_276\n",
            "FLNPFRWVINKYR\n",
            ">nonamp5_30_277\n",
            "VSDVPNNDDRFTY\n",
            ">nonamp5_30_278\n",
            "QLHVNKARRVYIL\n",
            ">nonamp5_30_279\n",
            "GLFDIIKNIVSTL\n",
            ">nonamp5_30_280\n",
            "FLPIIAKLLGGLL\n",
            ">nonamp5_30_281\n",
            "FLPIIAKVLSGLL\n",
            ">nonamp5_30_282\n",
            "YDPSPLQDFCVAD\n",
            ">nonamp5_30_283\n",
            "YDPSPLQDFCIAD\n",
            ">nonamp5_30_284\n",
            "PYDRISSSAFSDF\n",
            ">nonamp5_30_285\n",
            "QARPPHPPIPPAP\n",
            ">nonamp5_30_286\n",
            "GFKNVALSTARGF\n",
            ">nonamp5_30_287\n",
            "DGVTDPLEVNVVK\n",
            ">nonamp5_30_288\n",
            "CSKGGVGRGYGIG\n",
            ">nonamp5_30_289\n",
            "QGGWPRPGPEIPP\n",
            ">nonamp5_30_290\n",
            "AQGDNPDKDTDGN\n",
            ">nonamp5_30_291\n",
            "FLPLILGKLVKGLL\n",
            ">nonamp5_30_292\n",
            "GNTKKAVPGFYGTR\n",
            ">nonamp5_30_293\n",
            "LNLKALLAVAKKIL\n",
            ">nonamp5_30_294\n",
            "SVFDEYLEKSKANK\n",
            ">nonamp5_30_295\n",
            "EEQEQEQEQDTKMA\n",
            ">nonamp5_30_296\n",
            "SPLEQFSILMLIPM\n",
            ">nonamp5_30_297\n",
            "VAGKSFVPIAAGRQ\n",
            ">nonamp5_30_298\n",
            "MKYNPRVSSNRRKS\n",
            ">nonamp5_30_299\n",
            "MDTKLGLVEEEAAN\n",
            ">nonamp5_30_300\n",
            "AFVKGSAQRVAHGY\n",
            ">nonamp5_30_301\n",
            "VVKQGLLAGRIPGL\n",
            ">nonamp5_30_302\n",
            "DRVYIHPFHLLVYS\n",
            ">nonamp5_30_303\n",
            "VSDSQNSQDGLDPE\n",
            ">nonamp5_30_304\n",
            "GKPFYPPPIYPEDM\n",
            ">nonamp5_30_305\n",
            "PFNVGGLDKFGTLN\n",
            ">nonamp5_30_306\n",
            "INLKAIAAMAKKLL\n",
            ">nonamp5_30_307\n",
            "MNAAIFRFFFYFST\n",
            ">nonamp5_30_308\n",
            "SPTEQPYSSAAPLI\n",
            ">nonamp5_30_309\n",
            "GGGGTSGLFAFPRV\n",
            ">nonamp5_30_310\n",
            "NLINFMEMIRYTIP\n",
            ">nonamp5_30_311\n",
            "SCNCVCGVCCSCSP\n",
            ">nonamp5_30_312\n",
            "ECCHRQLLCCLRFV\n",
            ">nonamp5_30_313\n",
            "LKLKSIVSWAKKVL\n",
            ">nonamp5_30_314\n",
            "ARARLGVRRFRRKR\n",
            ">nonamp5_30_315\n",
            "FDVMGIIKKIAGAL\n",
            ">nonamp5_30_316\n",
            "GFRDGSADRISHGF\n",
            ">nonamp5_30_317\n",
            "AAQEGETLTVEETV\n",
            ">nonamp5_30_318\n",
            "GFKDGAADRISHGF\n",
            ">nonamp5_30_319\n",
            "PRGSPRTEYEAARR\n",
            ">nonamp5_30_320\n",
            "FRGHAKGDKKNQKK\n",
            ">nonamp5_30_321\n",
            "HSDLPSGVYDPAQA\n",
            ">nonamp5_30_322\n",
            "INWKALLDAAKKVL\n",
            ">nonamp5_30_323\n",
            "SADIVKKLWDNPAL\n",
            ">nonamp5_30_324\n",
            "AVPDKIDRRESGYV\n",
            ">nonamp5_30_325\n",
            "VVNTPGHAVSYHVY\n",
            ">nonamp5_30_326\n",
            "INWLKLGKMVIDAL\n",
            ">nonamp5_30_327\n",
            "MIREPRIREPRSLA\n",
            ">nonamp5_30_328\n",
            "AMAGTATVQGQGTR\n",
            ">nonamp5_30_329\n",
            "LEDNGRTHWAVLVA\n",
            ">nonamp5_30_330\n",
            "GDSEVPGMWFGPRL\n",
            ">nonamp5_30_331\n",
            "QWAQWPRPTPQIPP\n",
            ">nonamp5_30_332\n",
            "RPPGFSPFRVAPAS\n",
            ">nonamp5_30_333\n",
            "WNETSDKDLYTDSR\n",
            ">nonamp5_30_334\n",
            "IAIFNAYTPLPFAD\n",
            ">nonamp5_30_335\n",
            "GYIAYVHQNELVKR\n",
            ">nonamp5_30_336\n",
            "LGIYSDAGTQTCSK\n",
            ">nonamp5_30_337\n",
            "ADEGFSATVRNGAV\n",
            ">nonamp5_30_338\n",
            "GGEEQFDDYGHMRF\n",
            ">nonamp5_30_339\n",
            "INWLKLGKAVIDAL\n",
            ">nonamp5_30_340\n",
            "INWKAIIEAAKQAL\n",
            ">nonamp5_30_341\n",
            "SDPEVPGMWFGPRL\n",
            ">nonamp5_30_342\n",
            "LVSGCADLTALAAR\n",
            ">nonamp5_30_343\n",
            "FRPALIVRTKGTRL\n",
            ">nonamp5_30_344\n",
            "DDASDRAKKFYGLM\n",
            ">nonamp5_30_345\n",
            "AESGFQPVVDRKGD\n",
            ">nonamp5_30_346\n",
            "AGCKNFFWKTFTSC\n",
            ">nonamp5_30_347\n",
            "ELVSNASDALDKLR\n",
            ">nonamp5_30_348\n",
            "NFLGTLINLAKKIM\n",
            ">nonamp5_30_349\n",
            "IDWKKLLDAAKQIL\n",
            ">nonamp5_30_350\n",
            "FKGGGPYGQGVTRG\n",
            ">nonamp5_30_351\n",
            "VSTAPYGAWQSPID\n",
            ">nonamp5_30_352\n",
            "DVHSNTGIFGIHTS\n",
            ">nonamp5_30_353\n",
            "YNFNVYTSCTARRK\n",
            ">nonamp5_30_354\n",
            "VDWKKIGQHILSVL\n",
            ">nonamp5_30_355\n",
            "SLEDIEHEVEELLR\n",
            ">nonamp5_30_356\n",
            "CVTGAPGCVGGGRL\n",
            ">nonamp5_30_357\n",
            "EPVKKKDLKKATVPL\n",
            ">nonamp5_30_358\n",
            "GTQTNAPWGLARLIS\n",
            ">nonamp5_30_359\n",
            "MMIPGHFDYHRPKSV\n",
            ">nonamp5_30_360\n",
            "TQAGSQNPNDLSPGP\n",
            ">nonamp5_30_361\n",
            "DRYERGDVNLDLKGF\n",
            ">nonamp5_30_362\n",
            "TKDEGTFIAEGGGVR\n",
            ">nonamp5_30_363\n",
            "VDKPDYRPRPWPRPN\n",
            ">nonamp5_30_364\n",
            "NYQYSPPPPPKKKYY\n",
            ">nonamp5_30_365\n",
            "NIQIICCKHTPACCT\n",
            ">nonamp5_30_366\n",
            "AIGFDGLNDPDIVAR\n",
            ">nonamp5_30_367\n",
            "VVGGDECNINEHRSL\n",
            ">nonamp5_30_368\n",
            "DDDDDDHTIEHFETF\n",
            ">nonamp5_30_369\n",
            "PSYKLHYFDLRAAGE\n",
            ">nonamp5_30_370\n",
            "GQNFTSDKDLYTDSR\n",
            ">nonamp5_30_371\n",
            "SDNNQQGKSAQQGGY\n",
            ">nonamp5_30_372\n",
            "LDLTPGSHVDSYVEA\n",
            ">nonamp5_30_373\n",
            "QKIQEIDLQTYLQPQ\n",
            ">nonamp5_30_374\n",
            "VSGSGIMAKRVVVDA\n",
            ">nonamp5_30_375\n",
            "GNYYGYCRVHLNTAY\n",
            ">nonamp5_30_376\n",
            "RQRHPDCDKPPDTGN\n",
            ">nonamp5_30_377\n",
            "TEIQSFNFNGFVPEN\n",
            ">nonamp5_30_378\n",
            "DPMPAEDIVDLAYES\n",
            ">nonamp5_30_379\n",
            "MTKDEPLEGNVGVLT\n",
            ">nonamp5_30_380\n",
            "ANLFTSDQDLYTDSR\n",
            ">nonamp5_30_381\n",
            "EDGSGEFLAEGGGVR\n",
            ">nonamp5_30_382\n",
            "GLLGMVGSLLGGLGL\n",
            ">nonamp5_30_383\n",
            "AAKIKKGDNVVVLTG\n",
            ">nonamp5_30_384\n",
            "GLLGFVGSLLGGLGI\n",
            ">nonamp5_30_385\n",
            "SIGFDGLNDPDIVAR\n",
            ">nonamp5_30_386\n",
            "FGTYGHPRPRFYYNP\n",
            ">nonamp5_30_387\n",
            "INWKKIKSLIKAAMS\n",
            ">nonamp5_30_388\n",
            "MDYLITFYHSPQTNS\n",
            ">nonamp5_30_389\n",
            "ISALFDEYEPLNDAD\n",
            ">nonamp5_30_390\n",
            "DASNAQKQHDVNFLL\n",
            ">nonamp5_30_391\n",
            "RKRHPDCDKAADTRI\n",
            ">nonamp5_30_392\n",
            "MLLVIGSKNLSSTNM\n",
            ">nonamp5_30_393\n",
            "VIGGDECDINEHPFL\n",
            ">nonamp5_30_394\n",
            "ALTEQASKVALTADL\n",
            ">nonamp5_30_395\n",
            "NGRRYTTYGCSPPVT\n",
            ">nonamp5_30_396\n",
            "VVGGDECNINEHRFL\n",
            ">nonamp5_30_397\n",
            "QVRFRQCYFNPISCF\n",
            ">nonamp5_30_398\n",
            "MGNISPLTGTNGEIR\n",
            ">nonamp5_30_399\n",
            "VQPPHSHGDNFYIWT\n",
            ">nonamp5_30_400\n",
            "KKIEEEAAAAGATAE\n",
            ">nonamp5_30_401\n",
            "ITKDFDALMKYIKRI\n",
            ">nonamp5_30_402\n",
            "NSVVLGKKQRFHSWG\n",
            ">nonamp5_30_403\n",
            "ADPRNPLEECFRETD\n",
            ">nonamp5_30_404\n",
            "GWINEEKIQKKIDEP\n",
            ">nonamp5_30_405\n",
            "GLFDIIKKVASVIGGL\n",
            ">nonamp5_30_406\n",
            "GRPNPVNTKPTPYPRL\n",
            ">nonamp5_30_407\n",
            "MSIADLKSRLIKASTS\n",
            ">nonamp5_30_408\n",
            "TNSKEGEFIAEGGGVR\n",
            ">nonamp5_30_409\n",
            "FPIDDDDKIVGGYTNR\n",
            ">nonamp5_30_410\n",
            "TETTEGDFIAEGGGVR\n",
            ">nonamp5_30_411\n",
            "VNDGYLDNGLQEGDFE\n",
            ">nonamp5_30_412\n",
            "NSATTAVYSFQDWVSA\n",
            ">nonamp5_30_413\n",
            "MTRVQFKHHHHHHHPD\n",
            ">nonamp5_30_414\n",
            "ALVPLRLLLDHAAENG\n",
            ">nonamp5_30_415\n",
            "FFTTFDKDNDDQQNDN\n",
            ">nonamp5_30_416\n",
            "EITKFPKDQQNLIGQG\n",
            ">nonamp5_30_417\n",
            "NMYLPPVPPPPVVPTF\n",
            ">nonamp5_30_418\n",
            "GLLDIVKKVVGAFGSL\n",
            ">nonamp5_30_419\n",
            "QDSGDGWPQQPFVPRL\n",
            ">nonamp5_30_420\n",
            "IVSYPDDAGEHAHKMG\n",
            ">nonamp5_30_421\n",
            "TKTEEGEFISEGGGVR\n",
            ">nonamp5_30_422\n",
            "TDTKESDFLAEGGGVR\n",
            ">nonamp5_30_423\n",
            "GLFDIVKKVVGTIAGL\n",
            ">nonamp5_30_424\n",
            "NSGGGEGSGMWFGPRL\n",
            ">nonamp5_30_425\n",
            "SGSAKVAFSAIRSTNH\n",
            ">nonamp5_30_426\n",
            "FENEDEGYFQDPEDCS\n",
            ">nonamp5_30_427\n",
            "MAVKAISGCDKDQELI\n",
            ">nonamp5_30_428\n",
            "DDPTSTFTCPGGSNYK\n",
            ">nonamp5_30_429\n",
            "FSGLGSQNPGLLVLAK\n",
            ">nonamp5_30_430\n",
            "GLFDIVKKVVGAFGSL\n",
            ">nonamp5_30_431\n",
            "AATAATPATAATPARA\n",
            ">nonamp5_30_432\n",
            "GLFDIIKKVASVVGGL\n",
            ">nonamp5_30_433\n",
            "SVAALAAQGLLYNAPK\n",
            ">nonamp5_30_434\n",
            "GKTKGVTSGLIAFPRL\n",
            ">nonamp5_30_435\n",
            "TKATEGEFLAEGGGVR\n",
            ">nonamp5_30_436\n",
            "ISAVKEMTVRDALNSA\n",
            ">nonamp5_30_437\n",
            "RAGLKFPVGRVHRLLR\n",
            ">nonamp5_30_438\n",
            "DGDDYKFGHFRWSVPL\n",
            ">nonamp5_30_439\n",
            "MNSVQFKNHHHHHHPD\n",
            ">nonamp5_30_440\n",
            "KIMAKPSKFYEQLRGR\n",
            ">nonamp5_30_441\n",
            "SPTVIALRVVEALSPR\n",
            ">nonamp5_30_442\n",
            "ASNVPKELVEKGQNRV\n",
            ">nonamp5_30_443\n",
            "LEIADLAQYVVDLTAR\n",
            ">nonamp5_30_444\n",
            "SASSGESSGMWFGPRL\n",
            ">nonamp5_30_445\n",
            "MAKFELPNLPTADDAL\n",
            ">nonamp5_30_446\n",
            "GSNIEVMLGLPNSDVK\n",
            ">nonamp5_30_447\n",
            "LGYLGTCPTNIGTGLR\n",
            ">nonamp5_30_448\n",
            "GLFDIVKKVVGALGSL\n",
            ">nonamp5_30_449\n",
            "GLFDIVKKVVGAIGSL\n",
            ">nonamp5_30_450\n",
            "PAGHGARARTRDLFAR\n",
            ">nonamp5_30_451\n",
            "ADTGDGDFITEGGGVR\n",
            ">nonamp5_30_452\n",
            "NLYQFKNMIEEAATGT\n",
            ">nonamp5_30_453\n",
            "VRYADENVRTKEAKKK\n",
            ">nonamp5_30_454\n",
            "GPLQLSWNYNYGAAGK\n",
            ">nonamp5_30_455\n",
            "GECCTDCAQTAAANYC\n",
            ">nonamp5_30_456\n",
            "FLPLLAASFACTVTKKC\n",
            ">nonamp5_30_457\n",
            "GGETSGETKGMWFGPRL\n",
            ">nonamp5_30_458\n",
            "INIKDILAKLVKVLGHV\n",
            ">nonamp5_30_459\n",
            "SKDNYKNYIPLIVPFAT\n",
            ">nonamp5_30_460\n",
            "ESLPLAAFHQVDVYTAK\n",
            ">nonamp5_30_461\n",
            "SGETSGEGNGMWFGPRL\n",
            ">nonamp5_30_462\n",
            "SKITDILAKLGKVLAHV\n",
            ">nonamp5_30_463\n",
            "KIANGSGSEQDIAEAKI\n",
            ">nonamp5_30_464\n",
            "INWKKIAEIGKQVLSAL\n",
            ">nonamp5_30_465\n",
            "ALIFATLSAAYIGEALE\n",
            ">nonamp5_30_466\n",
            "ESGGSGEANGMWFGPRL\n",
            ">nonamp5_30_467\n",
            "EGANSNEAKGMWFGPRL\n",
            ">nonamp5_30_468\n",
            "KDFCHLPPKPGPCRAAI\n",
            ">nonamp5_30_469\n",
            "GGETGNDAKAMWFGPRL\n",
            ">nonamp5_30_470\n",
            "MADAEDIQPLVCDNGTG\n",
            ">nonamp5_30_471\n",
            "GNRPVYIPPPRPPHPRL\n",
            ">nonamp5_30_472\n",
            "TGDMSGEGKGMWFGPRL\n",
            ">nonamp5_30_473\n",
            "SGDTSSQAKGMWFGPRL\n",
            ">nonamp5_30_474\n",
            "GGESSNEAKGMWFGPRL\n",
            ">nonamp5_30_475\n",
            "LAEQAERYEEMVEFMEK\n",
            ">nonamp5_30_476\n",
            "NEVDIVGALNADLTQFL\n",
            ">nonamp5_30_477\n",
            "EGSGSGETSGMWFGPRL\n",
            ">nonamp5_30_478\n",
            "HYQEVPRQIQEKLIKGQ\n",
            ">nonamp5_30_479\n",
            "AVDFSKVPTATAGPCKG\n",
            ">nonamp5_30_480\n",
            "FGETSGETKGMWFGPRL\n",
            ">nonamp5_30_481\n",
            "GFIGWGNNIFGHYSGDF\n",
            ">nonamp5_30_482\n",
            "AEVQDKGEFLAEGGGVR\n",
            ">nonamp5_30_483\n",
            "GFADLFGKAVDFIKSRV\n",
            ">nonamp5_30_484\n",
            "LLGMIPVAISAINLMKL\n",
            ">nonamp5_30_485\n",
            "FLIGMTQGLICLITRKC\n",
            ">nonamp5_30_486\n",
            "GGETSGEGKGMWFGPRL\n",
            ">nonamp5_30_487\n",
            "SGLQLLDLSNNREVEML\n",
            ">nonamp5_30_488\n",
            "MIFVATSLSCRWWWPVM\n",
            ">nonamp5_30_489\n",
            "DLLTAIKRVKESMKRRT\n",
            ">nonamp5_30_490\n",
            "TDPLWQLPGAHLEQYLS\n",
            ">nonamp5_30_491\n",
            "GVGDLIRKAVSVIKNIV\n",
            ">nonamp5_30_492\n",
            "IKIMDILAKLGKVLAHV\n",
            ">nonamp5_30_493\n",
            "ANPTFGFTPLGLSSDAN\n",
            ">nonamp5_30_494\n",
            "GVIDAAKKVVNVLKNLP\n",
            ">nonamp5_30_495\n",
            "FLSLIPGAISAIASLFK\n",
            ">nonamp5_30_496\n",
            "IEMAEGGNDNIGNESIK\n",
            ">nonamp5_30_497\n",
            "GLFDIVKKIAGHIVSSI\n",
            ">nonamp5_30_498\n",
            "GVLDAFKKIATVVKNLV\n",
            ">nonamp5_30_499\n",
            "GGETGSDAKAMWFGPRL\n",
            ">nonamp5_30_500\n",
            "GGETGGEGKGMWFGPRL\n",
            ">nonamp5_30_501\n",
            "LPTGPNNPTTLDNSSII\n",
            ">nonamp5_30_502\n",
            "QQGEGGPYGGLSPLRFS\n",
            ">nonamp5_30_503\n",
            "FVPLLVSKLVCVVTKKC\n",
            ">nonamp5_30_504\n",
            "GLLDFLKAAGKGLVTNL\n",
            ">nonamp5_30_505\n",
            "GLFDIVKKIAGHIAGSI\n",
            ">nonamp5_30_506\n",
            "MNNSCLSQSTQWWWRAN\n",
            ">nonamp5_30_507\n",
            "GVGSFIHKVVSAIKNVA\n",
            ">nonamp5_30_508\n",
            "FLIGMTHGLICLISRKC\n",
            ">nonamp5_30_509\n",
            "MERQVFIRLRHRLEADP\n",
            ">nonamp5_30_510\n",
            "AGESSNEAKGMWFGPRL\n",
            ">nonamp5_30_511\n",
            "TATTRRRGRPPGFSPFR\n",
            ">nonamp5_30_512\n",
            "SLIPHAINAVSAIAKHF\n",
            ">nonamp5_30_513\n",
            "YLGPTADSTMDQTFANN\n",
            ">nonamp5_30_514\n",
            "TNDSAGDGTTTASVLAR\n",
            ">nonamp5_30_515\n",
            "ETLFDPCSTQDIKKVGV\n",
            ">nonamp5_30_516\n",
            "GSGGSGEANGMWFGPRL\n",
            ">nonamp5_30_517\n",
            "DLLTTIKRVKESMKRRT\n",
            ">nonamp5_30_518\n",
            "NLIQFANMIGCANHGSR\n",
            ">nonamp5_30_519\n",
            "EEVQETVNLKYEYSVYR\n",
            ">nonamp5_30_520\n",
            "GAAILTNDNAMDALQDL\n",
            ">nonamp5_30_521\n",
            "AVTSSVADTTTVVRDDF\n",
            ">nonamp5_30_522\n",
            "IVGGMEATPHSWPHQVA\n",
            ">nonamp5_30_523\n",
            "SASGSGESSGMWFGPRL\n",
            ">nonamp5_30_524\n",
            "PAQPFRIKKRQGPFERP\n",
            ">nonamp5_30_525\n",
            "MFTFAILLLCVQGCLIQ\n",
            ">nonamp5_30_526\n",
            "SAPRGCWTKSYPPKPCK\n",
            ">nonamp5_30_527\n",
            "KWCFRVCYRGICYRRCR\n",
            ">nonamp5_30_528\n",
            "GGSGSGETSGMWFGPRL\n",
            ">nonamp5_30_529\n",
            "DGDMSGEGKGMWFGPRL\n",
            ">nonamp5_30_530\n",
            "QGPWMEEEEAAYGWMDF\n",
            ">nonamp5_30_531\n",
            "GFLSALKKYLPIVLKHV\n",
            ">nonamp5_30_532\n",
            "MTLDVFTKVVSQADSRG\n",
            ">nonamp5_30_533\n",
            "GGGGSGETSGMWFGPRL\n",
            ">nonamp5_30_534\n",
            "MKAIMLVNFCDERGSGR\n",
            ">nonamp5_30_535\n",
            "NLFQFGEMILEKTGKEA\n",
            ">nonamp5_30_536\n",
            "GLFDVIKKVASVIGLASP\n",
            ">nonamp5_30_537\n",
            "IFGAILPLALGALKNLIK\n",
            ">nonamp5_30_538\n",
            "NSELINAILGSPTLFGEV\n",
            ">nonamp5_30_539\n",
            "VDTSRLFLTVVNNPPTVV\n",
            ">nonamp5_30_540\n",
            "FGNQQQLKSVADIVINHR\n",
            ">nonamp5_30_541\n",
            "VARSLLIFEVQQPFLFLL\n",
            ">nonamp5_30_542\n",
            "YDGTNCKPGVCWEPKPGY\n",
            ">nonamp5_30_543\n",
            "NSGMINSILGIPRVMTEA\n",
            ">nonamp5_30_544\n",
            "NSELINAILGSPTLMGEV\n",
            ">nonamp5_30_545\n",
            "ATGWSAFFIDGKWTEAKK\n",
            ">nonamp5_30_546\n",
            "FEDGKKVRFFKSNKETIK\n",
            ">nonamp5_30_547\n",
            "EYDDMYTEKRPKVYAFGL\n",
            ">nonamp5_30_548\n",
            "NSELINSILGLPKVMNDA\n",
            ">nonamp5_30_549\n",
            "GLVGEIISRGDFAIDIGR\n",
            ">nonamp5_30_550\n",
            "QNQPPDFANPFIIPQNAA\n",
            ">nonamp5_30_551\n",
            "KPAPEPAPEPAPEAAPEA\n",
            ">nonamp5_30_552\n",
            "VEWSDSERKTLVSVWGKI\n",
            ">nonamp5_30_553\n",
            "TDPDADEGEFLAEGGGVR\n",
            ">nonamp5_30_554\n",
            "GLPGESGAVGPAGPIGSR\n",
            ">nonamp5_30_555\n",
            "NSELINSILGLPKVMNEA\n",
            ">nonamp5_30_556\n",
            "SDTVDIYDAGKILERVII\n",
            ">nonamp5_30_557\n",
            "VDPAQVSGSWRTAAIASD\n",
            ">nonamp5_30_558\n",
            "MKFGLFFQNFLSENQSSE\n",
            ">nonamp5_30_559\n",
            "DEGPYKMEHFRWGSPRKD\n",
            ">nonamp5_30_560\n",
            "VQIFVRDNNVDQALKALK\n",
            ">nonamp5_30_561\n",
            "YLKGCWTKSYPPKPCFSR\n",
            ">nonamp5_30_562\n",
            "AAVSLLQNKLAYDGFLSK\n",
            ">nonamp5_30_563\n",
            "GLFDIIKKVASVVGLASQ\n",
            ">nonamp5_30_564\n",
            "TDPDADKGEFLAEGGGVR\n",
            ">nonamp5_30_565\n",
            "GFVDFLKKVAGTIANVVT\n",
            ">nonamp5_30_566\n",
            "GLVDVLGKVGGLIKKLLP\n",
            ">nonamp5_30_567\n",
            "YEYSVYREIIGSGHIIAR\n",
            ">nonamp5_30_568\n",
            "STRTPEFLGLDNQCGVWA\n",
            ">nonamp5_30_569\n",
            "DGAETPGAAASLWFGPRV\n",
            ">nonamp5_30_570\n",
            "MMKLLIIVVLLVISFPAY\n",
            ">nonamp5_30_571\n",
            "ISGLIYEETRIFLENVIR\n",
            ">nonamp5_30_572\n",
            "LAKTVPLNDGTNFPIFGG\n",
            ">nonamp5_30_573\n",
            "VEVATVKNCGKKLLATPR\n",
            ">nonamp5_30_574\n",
            "YDIPEPFRWDESFKVFYE\n",
            ">nonamp5_30_575\n",
            "GFLSILKKVLPKVMAHMK\n",
            ">nonamp5_30_576\n",
            "TPEHQRYVELFIVVDHGM\n",
            ">nonamp5_30_577\n",
            "TSHGGGKAGKSKLLDVNY\n",
            ">nonamp5_30_578\n",
            "VIEVVYLRTPFSAGNATT\n",
            ">nonamp5_30_579\n",
            "RRWCFRVCYKGFCYRKCR\n",
            ">nonamp5_30_580\n",
            "GLFDIIKKVASVVGLASP\n",
            ">nonamp5_30_581\n",
            "HHDHHAAVGGGGGGGGGA\n",
            ">nonamp5_30_582\n",
            "RRWCFRVCYRGFCYRKCR\n",
            ">nonamp5_30_583\n",
            "WLNALLHHGLNCAKGVLA\n",
            ">nonamp5_30_584\n",
            "SPSNSKCPDGPDCFVGLM\n",
            ">nonamp5_30_585\n",
            "SASGGAGESSGMWFGPRL\n",
            ">nonamp5_30_586\n",
            "SDLTWTYQSPGDPTNSKN\n",
            ">nonamp5_30_587\n",
            "QASTDYDDEDESTVPEAR\n",
            ">nonamp5_30_588\n",
            "SGYLPGKEYVYKYKGKVF\n",
            ">nonamp5_30_589\n",
            "AYVSQSGAPWGLGRISHK\n",
            ">nonamp5_30_590\n",
            "ADVRNPLEEFRETDYEVL\n",
            ">nonamp5_30_591\n",
            "AEYTLPDLGWDYAASGPG\n",
            ">nonamp5_30_592\n",
            "SLVSLNEPKDEIYMESQP\n",
            ">nonamp5_30_593\n",
            "ETDLLLDDSLVSLFGNRR\n",
            ">nonamp5_30_594\n",
            "SGLLINQPKYSWLKELGL\n",
            ">nonamp5_30_595\n",
            "WFDPLRITETTTGSVTLK\n",
            ">nonamp5_30_596\n",
            "GGGGGSGETSGMWFGPRL\n",
            ">nonamp5_30_597\n",
            "AYSYVSEYKRLPVYNFGL\n",
            ">nonamp5_30_598\n",
            "MHIVVCIKQVPDSAQIRV\n",
            ">nonamp5_30_599\n",
            "MDFIIDIIKKIVGLFTGK\n",
            ">nonamp5_30_600\n",
            "ESIVRPPPVEAKVEETPE\n",
            ">nonamp5_30_601\n",
            "AGEGLSSPFWSLAAPQRF\n",
            ">nonamp5_30_602\n",
            "HDRPKFCYLPADPGECMA\n",
            ">nonamp5_30_603\n",
            "DVTFSMLGANGATYYQFF\n",
            ">nonamp5_30_604\n",
            "EDGSDAVSGEFLAEGGGVR\n",
            ">nonamp5_30_605\n",
            "FLSLIPHAINAISAIANHF\n",
            ">nonamp5_30_606\n",
            "GILDVAKTLVGKLRNVLGI\n",
            ">nonamp5_30_607\n",
            "SGLQFAVMDGQGFLPFPRV\n",
            ">nonamp5_30_608\n",
            "CRQSCSFGPLTFVCDGNTK\n",
            ">nonamp5_30_609\n",
            "SGLQFAVLDGQGFIPFSRV\n",
            ">nonamp5_30_610\n",
            "SIVPLGLPVPIGPIVVGPR\n",
            ">nonamp5_30_611\n",
            "LDYDHEEEDGRTKVTFDAR\n",
            ">nonamp5_30_612\n",
            "GIVDFAKKVVGGIRNALGI\n",
            ">nonamp5_30_613\n",
            "ADGSDPAGGEFLEAGGGVR\n",
            ">nonamp5_30_614\n",
            "CPCGRRRCCVRGLNVYCCF\n",
            ">nonamp5_30_615\n",
            "AYDPDPYKRYSAEHTFFLL\n",
            ">nonamp5_30_616\n",
            "KRMLSNRESARRSRMRKQK\n",
            ">nonamp5_30_617\n",
            "FLSLIPAAISAVSALADHF\n",
            ">nonamp5_30_618\n",
            "MGIFSIFVISTVHYQPNKK\n",
            ">nonamp5_30_619\n",
            "FLSLIPHAINAVSALVHHF\n",
            ">nonamp5_30_620\n",
            "VATSEQFNKTFIELVIVVD\n",
            ">nonamp5_30_621\n",
            "SGLQFAVLDGQGFIPFPRV\n",
            ">nonamp5_30_622\n",
            "FIGAILPAIAGLVHGLINR\n",
            ">nonamp5_30_623\n",
            "LNLTKWLGKLGVILSHLNK\n",
            ">nonamp5_30_624\n",
            "NLFQFAEMIVKMTGKEAVH\n",
            ">nonamp5_30_625\n",
            "CKQSCSFGPFTFVCDGNTK\n",
            ">nonamp5_30_626\n",
            "GFVDLAKKVVGGIRNALGI\n",
            ">nonamp5_30_627\n",
            "ADSRNPLEEEFRETNYEEF\n",
            ">nonamp5_30_628\n",
            "DAHGSGNAHKQQDINHLLD\n",
            ">nonamp5_30_629\n",
            "FFSMIPKIATGIASLVKNL\n",
            ">nonamp5_30_630\n",
            "AADDVTVVIGSAAPMSGPQ\n",
            ">nonamp5_30_631\n",
            "FFGDFGNISSAAAITGNPK\n",
            ">nonamp5_30_632\n",
            "LNPFRWMINKYREWKNKKN\n",
            ">nonamp5_30_633\n",
            "DVPASIDWREYGYVTEVKD\n",
            ">nonamp5_30_634\n",
            "FLSLIPHAINAISAIAHHL\n",
            ">nonamp5_30_635\n",
            "SGLQFAVLDGQGFLPFPRV\n",
            ">nonamp5_30_636\n",
            "MMRLVIILIVLLLISFSAY\n",
            ">nonamp5_30_637\n",
            "AQAATPAADGKKKISIDTR\n",
            ">nonamp5_30_638\n",
            "THLFQPSLVLDMAKVLLDN\n",
            ">nonamp5_30_639\n",
            "FLSLIPHIATGIAALAKHL\n",
            ">nonamp5_30_640\n",
            "GILDFAKTVVGGIRNALGI\n",
            ">nonamp5_30_641\n",
            "ADGSDPASSDFLAEGGGVR\n",
            ">nonamp5_30_642\n",
            "GEDEYAEGIREYQLIHGKI\n",
            ">nonamp5_30_643\n",
            "EDGSDPASGDFLAEGGGVR\n",
            ">nonamp5_30_644\n",
            "GIIDIAKKLVGGIRNVLGI\n",
            ">nonamp5_30_645\n",
            "FLSLIPHAINAVSALAKHF\n",
            ">nonamp5_30_646\n",
            "GEPEVAKWAEGLREKAASN\n",
            ">nonamp5_30_647\n",
            "FLSLIPHAINAISAIADHF\n",
            ">nonamp5_30_648\n",
            "FLLSLPHLASGLASLVLSK\n",
            ">nonamp5_30_649\n",
            "LSDYDEEEDERAKATLDAR\n",
            ">nonamp5_30_650\n",
            "RGDKDIFTVHDILKARGEI\n",
            ">nonamp5_30_651\n",
            "EFSPTRKFGGHGDDKKKKK\n",
            ">nonamp5_30_652\n",
            "FLSLIPHAINAVSALANHG\n",
            ">nonamp5_30_653\n",
            "FLSLIPHAINAVSAIAKHN\n",
            ">nonamp5_30_654\n",
            "NGERAPGSKKAPSGFLGTR\n",
            ">nonamp5_30_655\n",
            "FLSLIPKIAGGIASLVKNL\n",
            ">nonamp5_30_656\n",
            "DVLELTDENFESRVSSDTG\n",
            ">nonamp5_30_657\n",
            "MMKHVIILVILLVISFQAY\n",
            ">nonamp5_30_658\n",
            "ADDSDPVGGEFLAEGGGVR\n",
            ">nonamp5_30_659\n",
            "TAGFGVFTNIINGGLECGK\n",
            ">nonamp5_30_660\n",
            "SLSINTNTSEMIALQTLDA\n",
            ">nonamp5_30_661\n",
            "VVGGDECNINEHRSLVAIF\n",
            ">nonamp5_30_662\n",
            "VIGGDECNINEHRSLALVY\n",
            ">nonamp5_30_663\n",
            "CVQSCSFGPLTWSCDGNTK\n",
            ">nonamp5_30_664\n",
            "FLSLIPHAISAISAIADHL\n",
            ">nonamp5_30_665\n",
            "ASGENQAELKLATHNVYML\n",
            ">nonamp5_30_666\n",
            "NQDCRPGWSFYEQNCYKVF\n",
            ">nonamp5_30_667\n",
            "ATDYDEEEDDRVKVRLDAR\n",
            ">nonamp5_30_668\n",
            "EYYDDTDEEERIVSTVDAR\n",
            ">nonamp5_30_669\n",
            "AIDYDEDEDGRPKVHVDAR\n",
            ">nonamp5_30_670\n",
            "KGAAKGLLEVASCKLSKSC\n",
            ">nonamp5_30_671\n",
            "SGGGNVIMNQMNKRNHAKD\n",
            ">nonamp5_30_672\n",
            "FLAKKVGKQLASHLAKKQLE\n",
            ">nonamp5_30_673\n",
            "GSLGEKYAQKAAEVLTSIIP\n",
            ">nonamp5_30_674\n",
            "MINGWTGNILRINLTTGAIS\n",
            ">nonamp5_30_675\n",
            "TVKVTVTGAAGQIGYALLFR\n",
            ">nonamp5_30_676\n",
            "DVNGGGHTLPQPLYQTTVVL\n",
            ">nonamp5_30_677\n",
            "TRTPVNVTVTGAAGQIGYAL\n",
            ">nonamp5_30_678\n",
            "VATFTLPDLPYDYGALEPAV\n",
            ">nonamp5_30_679\n",
            "MNRLKEIFQKEITPALVSKF\n",
            ">nonamp5_30_680\n",
            "MKVFVLNGPNLGRLGKREPA\n",
            ">nonamp5_30_681\n",
            "ALAGTIIAGASLTFKILDEV\n",
            ">nonamp5_30_682\n",
            "VVGGDECNINEHRSLALMYA\n",
            ">nonamp5_30_683\n",
            "DFIGSSTNVIMVASTTLMLF\n",
            ">nonamp5_30_684\n",
            "MPGLDSPAAVRRAAMDLLAR\n",
            ">nonamp5_30_685\n",
            "GPNGKSQSIIVGPWGDRVTN\n",
            ">nonamp5_30_686\n",
            "QQRFPQRYVQLVITVDHVMN\n",
            ">nonamp5_30_687\n",
            "KEEAKVLGTVIGIDLGTQYL\n",
            ">nonamp5_30_688\n",
            "MVPYRNPRHQHVASVLRSGG\n",
            ">nonamp5_30_689\n",
            "TVLKTDAQCNCEAFKALSLP\n",
            ">nonamp5_30_690\n",
            "GLMSVLGHAVGNVLGGLFKS\n",
            ">nonamp5_30_691\n",
            "NVRFDLSGATSSSYKTFIKN\n",
            ">nonamp5_30_692\n",
            "TAANVKIFNTEEVQNFINLL\n",
            ">nonamp5_30_693\n",
            "DSVGSTTAHKQQNINHLLDK\n",
            ">nonamp5_30_694\n",
            "MKCNECNRVQLKEGSVSLTL\n",
            ">nonamp5_30_695\n",
            "AVNVNTNVSAMTAQRYLNQA\n",
            ">nonamp5_30_696\n",
            "FDKNQPWGVIRDLNVVNFKR\n",
            ">nonamp5_30_697\n",
            "GLLGSIGNAIGAFIANKLKP\n",
            ">nonamp5_30_698\n",
            "ADDKNPLEECFCEDDDYCEG\n",
            ">nonamp5_30_699\n",
            "GIFTFEDESTTTVAPAKLYK\n",
            ">nonamp5_30_700\n",
            "RVSNLTIHPLRNIIDLRYVG\n",
            ">nonamp5_30_701\n",
            "FLGKKVLKAVGKQAAKKQME\n",
            ">nonamp5_30_702\n",
            "GYLDYDEVDDNRAKLPLDAR\n",
            ">nonamp5_30_703\n",
            "KVFFEERFEDGWENRWVKKD\n",
            ">nonamp5_30_704\n",
            "IIDYYDEGEEDRDVGVVDAR\n",
            ">nonamp5_30_705\n",
            "DEPPQTPWDRVKDLVTVYVE\n",
            ">nonamp5_30_706\n",
            "NEQSGKSQTVIVGSWGAKVS\n",
            ">nonamp5_30_707\n",
            "MALNLQDKQAIVAEVSEVAK\n",
            ">nonamp5_30_708\n",
            "VIGGDECNINEHPFLVLVYY\n",
            ">nonamp5_30_709\n",
            "ARCENFADSYRQPPISSSQT\n",
            ">nonamp5_30_710\n",
            "MKCNKMNRVQLKEGSVSMTL\n",
            ">nonamp5_30_711\n",
            "TKQTLKVLITGAAGQIGYSL\n",
            ">nonamp5_30_712\n",
            "SPVAASYRATAGLAGKALDF\n",
            ">nonamp5_30_713\n",
            "KVPVDDQFRRVNNGGATDTR\n",
            ">nonamp5_30_714\n",
            "MKVTFQGNEVTLQGKEVKVG\n",
            ">nonamp5_30_715\n",
            "ITCPQVTQSLAPCVPYLISG\n",
            ">nonamp5_30_716\n",
            "TVAACNSPKVGLDSDAELVR\n",
            ">nonamp5_30_717\n",
            "VLLDGNGEVVQNGGTYYLLP\n",
            ">nonamp5_30_718\n",
            "AEELVKPYNGDPFVGHLSTP\n",
            ">nonamp5_30_719\n",
            "VDKGSYLPRPTPPRPIYNRN\n",
            ">nonamp5_30_720\n",
            "MDLIPDLAVETWLLLAVTLV\n",
            ">nonamp5_30_721\n",
            "LHSNLEYQYRYSGRVASGIP\n",
            ">nonamp5_30_722\n",
            "GLTQKDLVALSGAHTIGKAR\n",
            ">nonamp5_30_723\n",
            "MLTYTGTVINVQTFAAKPDP\n",
            ">nonamp5_30_724\n",
            "GADFQECMKEHSQKQHQHQG\n",
            ">nonamp5_30_725\n",
            "DGDALLKPCKLGDMQKLSSA\n",
            ">nonamp5_30_726\n",
            "AKLDFDRSKEHVNVGTIGVH\n",
            ">nonamp5_30_727\n",
            "ANNPGARKAIRKIEARTEVN\n",
            ">nonamp5_30_728\n",
            "EQSAGFREYIDFFDGYSLTY\n",
            ">nonamp5_30_729\n",
            "SATAAREEYQRKRSQFIEIG\n",
            ">nonamp5_30_730\n",
            "KCGVSIPYKISPSTDCSSVK\n",
            ">nonamp5_30_731\n",
            "FLGGLMKAFPAIICAVTKKC\n",
            ">nonamp5_30_732\n",
            "MLLHRLSKFCKIERDIVYIS\n",
            ">nonamp5_30_733\n",
            "VIGGDICNINEHNFLVALYE\n",
            ">nonamp5_30_734\n",
            "FLSLALAALPKFLCLVFKKC\n",
            ">nonamp5_30_735\n",
            "ELPVNFYALNLTADNINIGY\n",
            ">nonamp5_30_736\n",
            "SIFAFQDESPSAIAQAKLFK\n",
            ">nonamp5_30_737\n",
            "DFKCPSEWYAYDQHCYRIIN\n",
            ">nonamp5_30_738\n",
            "FLSLIPHAINAVSTLVHHSG\n",
            ">nonamp5_30_739\n",
            "KTGVNKPELLPKEETTVIDV\n",
            ">nonamp5_30_740\n",
            "QKVAVRLKEVVYTLSPHQQN\n",
            ">nonamp5_30_741\n",
            "MELSLLLFLALLLGLLLLLF\n",
            ">nonamp5_30_742\n",
            "EDSLSDWERVYLPIDPGVVL\n",
            ">nonamp5_30_743\n",
            "LNPFRWVINKYREWKNKKDS\n",
            ">nonamp5_30_744\n",
            "SRLPPATRDKLADEITFFPA\n",
            ">nonamp5_30_745\n",
            "DVVASSTAHKQQDINHLLDK\n",
            ">nonamp5_30_746\n",
            "TDMLAVSVSSTDAIGHKYGT\n",
            ">nonamp5_30_747\n",
            "MAIVGTIIKIIKAIIDIFAK\n",
            ">nonamp5_30_748\n",
            "LLSTLTDTSIKEAVATDKAP\n",
            ">nonamp5_30_749\n",
            "EVEMLGDELRTLNQNLGLMR\n",
            ">nonamp5_30_750\n",
            "KAVVLGKAGGTAELPCQASQ\n",
            ">nonamp5_30_751\n",
            "RGSNLTHPLRNIGDLFYVGN\n",
            ">nonamp5_30_752\n",
            "FIQYLAPLIPHAVKAISDLI\n",
            ">nonamp5_30_753\n",
            "GVLFASGQNLARTLIEFLLR\n",
            ">nonamp5_30_754\n",
            "VVGGEVARAHSWPWQISLQY\n",
            ">nonamp5_30_755\n",
            "DINGGGATLPQALYQTSGVL\n",
            ">nonamp5_30_756\n",
            "ILGPVLGLVGNALGGLIKNE\n",
            ">nonamp5_30_757\n",
            "VVGGDECNINEHRFLVALYY\n",
            ">nonamp5_30_758\n",
            "GVFTFEDESTSTVAPAKLYK\n",
            ">nonamp5_30_759\n",
            "ANNAGARKAIRKIEARTEVN\n",
            ">nonamp5_30_760\n",
            "CKPASIKIRLNSTADTGFYV\n",
            ">nonamp5_30_761\n",
            "QELASFHSVSKGFMGECGFR\n",
            ">nonamp5_30_762\n",
            "AYERQFYPGATSVAENNIGH\n",
            ">nonamp5_30_763\n",
            "AFELPALPYAKDALEPHISA\n",
            ">nonamp5_30_764\n",
            "SNTSHQDFHLFYGDNGMPVH\n",
            ">nonamp5_30_765\n",
            "IVGGTEVTPGEIPYQLSFQD\n",
            ">nonamp5_30_766\n",
            "MKLIAKTRILNTLVFSAAGK\n",
            ">nonamp5_30_767\n",
            "GVGYKVVVTTTAAADDDDVV\n",
            ">nonamp5_30_768\n",
            "NAAVAGAVIEGATLTFEVLQ\n",
            ">nonamp5_30_769\n",
            "NEQSGISQTVIVGPWGAQVT\n",
            ">nonamp5_30_770\n",
            "VNPIILGVLPKFVCLITKKC\n",
            ">nonamp5_30_771\n",
            "FLNPFRWVINKYREWKNKKDS\n",
            ">nonamp5_30_772\n",
            "GLLASLGKVLGGYLAEKLKPK\n",
            ">nonamp5_30_773\n",
            "LDEFRVYSDDANKYKISIPQD\n",
            ">nonamp5_30_774\n",
            "QHSTDYDEVEDDRAKLHLDAR\n",
            ">nonamp5_30_775\n",
            "ENFKIKHTEPGLLSMANAGKN\n",
            ">nonamp5_30_776\n",
            "QHLADYDEVEDDRAKLHLDAR\n",
            ">nonamp5_30_777\n",
            "QPSYDYDEEEDDRAKLRLDAR\n",
            ">nonamp5_30_778\n",
            "MAKINELLRESTTTNSNSIGR\n",
            ">nonamp5_30_779\n",
            "LIGPVLGLVGSALGGLLKKIG\n",
            ">nonamp5_30_780\n",
            "AMASSLLSGWGGPTTLLVAPM\n",
            ">nonamp5_30_781\n",
            "TRICCGCYWNGSKDVCSQSCC\n",
            ">nonamp5_30_782\n",
            "DQPGDVKTHKQYDVNYLFFKI\n",
            ">nonamp5_30_783\n",
            "MADENTPVMPEEVPAVEGVGM\n",
            ">nonamp5_30_784\n",
            "GIFGKILGVGKKVLCGLSGMC\n",
            ">nonamp5_30_785\n",
            "MGIIAGIIKFIKGLIEKFTGK\n",
            ">nonamp5_30_786\n",
            "GLLSKVLGVGKKVLCGVSGLC\n",
            ">nonamp5_30_787\n",
            "VIGGDECNINEHRFLVALYDF\n",
            ">nonamp5_30_788\n",
            "QFPTDYDEGEDDRPKSGLGAR\n",
            ">nonamp5_30_789\n",
            "GGPSQKQKQHKVNLVNIKVYI\n",
            ">nonamp5_30_790\n",
            "MDAVLSVQGASAPVKKKSFFS\n",
            ">nonamp5_30_791\n",
            "MSKVIETKQQVVTEIADKLRA\n",
            ">nonamp5_30_792\n",
            "EDHPVHNRGEYSVCDSVNVWV\n",
            ">nonamp5_30_793\n",
            "ISAEAPLYAEVGMPALSPTMT\n",
            ">nonamp5_30_794\n",
            "CLGVGSCNNFAGCGYAIVCFW\n",
            ">nonamp5_30_795\n",
            "FANTIRLLINKVREWKNKQSS\n",
            ">nonamp5_30_796\n",
            "GEEEYQKMLENLREAEVKKNA\n",
            ">nonamp5_30_797\n",
            "AGEDVSHELEEKEKALANHSE\n",
            ">nonamp5_30_798\n",
            "FVNTIRLLINKAREWNNKQSS\n",
            ">nonamp5_30_799\n",
            "NRTFKTNTKCHVKNQCNFLCQ\n",
            ">nonamp5_30_800\n",
            "FLISIPYSASIGGTATLTGTA\n",
            ">nonamp5_30_801\n",
            "GLFGVLAKVAAHVVPAIAEHF\n",
            ">nonamp5_30_802\n",
            "QHLADYDEVDDDRAKLHLDAR\n",
            ">nonamp5_30_803\n",
            "MKRISTTITTTITITTGNGAG\n",
            ">nonamp5_30_804\n",
            "DKNKKPIRVGGRRPPGFTPFR\n",
            ">nonamp5_30_805\n",
            "VIGGDECNINEHRSLVAIFDS\n",
            ">nonamp5_30_806\n",
            "GVLDIFKDAAKQILAHAAEQI\n",
            ">nonamp5_30_807\n",
            "ISDFDEYEPLNDADNNEVLDF\n",
            ">nonamp5_30_808\n",
            "APSQSTVTALLTSCVSYIDDQ\n",
            ">nonamp5_30_809\n",
            "GVTGFGFDLVRYLFAGVVDGR\n",
            ">nonamp5_30_810\n",
            "FLNALKNFAKTAGKRLKSLLN\n",
            ">nonamp5_30_811\n",
            "IIGPVLGMVGSALGGLLKKIG\n",
            ">nonamp5_30_812\n",
            "GLLGSIGKVLGGYLAEKLKPK\n",
            ">nonamp5_30_813\n",
            "MALNLQDKQAIVAEVSEVAKG\n",
            ">nonamp5_30_814\n",
            "GIFGKILGAGKKVLCGLSGLC\n",
            ">nonamp5_30_815\n",
            "GFMKYIGPLIPHAVKAISDLI\n",
            ">nonamp5_30_816\n",
            "MFFKIDLKNHPYLIRLKKQEE\n",
            ">nonamp5_30_817\n",
            "MNRISTTTITTITITTGNGAG\n",
            ">nonamp5_30_818\n",
            "SINNTGGSGNRRLDKNGFAGQ\n",
            ">nonamp5_30_819\n",
            "MAAACRCLSLLLLSTCVALLL\n",
            ">nonamp5_30_820\n",
            "VLDIYEQKLGQTRVLDIYEQK\n",
            ">nonamp5_30_821\n",
            "MKVKVDADACIGCGVCVELCP\n",
            ">nonamp5_30_822\n",
            "GSKKPVPIIYCNRRTGKCQRM\n",
            ">nonamp5_30_823\n",
            "FGLPMLSILPKALCILLKRKC\n",
            ">nonamp5_30_824\n",
            "DINGGGATLPQKLYQTSGVLT\n",
            ">nonamp5_30_825\n",
            "AKPAKRVAVTGAAGQIAYSLL\n",
            ">nonamp5_30_826\n",
            "ALCNCNRIIIPHMCWKKCGKK\n",
            ">nonamp5_30_827\n",
            "DLWSWGQMIQETGLLPSYTTY\n",
            ">nonamp5_30_828\n",
            "FINTIKLLIEKYREWKNKQSS\n",
            ">nonamp5_30_829\n",
            "MLNERFSILVLLLILLTFSLG\n",
            ">nonamp5_30_830\n",
            "NGPNGKSQSIIVGPWGDRVTN\n",
            ">nonamp5_30_831\n",
            "GLLGSIFGAGKKIACALSGLC\n",
            ">nonamp5_30_832\n",
            "IIGGVESRPHSRPYMATLEIT\n",
            ">nonamp5_30_833\n",
            "EFPTDYDEGEDDRPKVGLGAR\n",
            ">nonamp5_30_834\n",
            "MGIIAGIIKVIKSLIEQFTGK\n",
            ">nonamp5_30_835\n",
            "NEQSGKSQTVIVGPWGAQVST\n",
            ">nonamp5_30_836\n",
            "CLGIGSCNNFAGCGYAVVCFW\n",
            ">nonamp5_30_837\n",
            "MKPALRDFIAIVQERLASVTA\n",
            ">nonamp5_30_838\n",
            "VSYNSKFLAATVQAEPVVLDA\n",
            ">nonamp5_30_839\n",
            "AILELPQSPNVFHPEKPSAVG\n",
            ">nonamp5_30_840\n",
            "QFPTDYDEGQDDRPKLGLGAR\n",
            ">nonamp5_30_841\n",
            "DGPAQKQNTVNQLLVLIYLYK\n",
            ">nonamp5_30_842\n",
            "KLSGCFGFKLDRIGTMSGLGC\n",
            ">nonamp5_30_843\n",
            "MVKTPITEAIAAADTQGRFLS\n",
            ">nonamp5_30_844\n",
            "NPLFGIAGEDGPTGPSGIVGQ\n",
            ">nonamp5_30_845\n",
            "GLLGSLFGAGKKVACALSGLC\n",
            ">nonamp5_30_846\n",
            "FINTIRLLINKYREWKNKKDS\n",
            ">nonamp5_30_847\n",
            "SVTADNASETKVREIGQEKSS\n",
            ">nonamp5_30_848\n",
            "SEKITVFQKNFQVTENSSHFV\n",
            ">nonamp5_30_849\n",
            "RQRVEELSKFSKKGAAARRRK\n",
            ">nonamp5_30_850\n",
            "LDTDLQGTMPEVYASERAAFL\n",
            ">nonamp5_30_851\n",
            "MEWYPEAAANAERYTQIVWYK\n",
            ">nonamp5_30_852\n",
            "DNWWPKPPHQGPRPPRPRPKP\n",
            ">nonamp5_30_853\n",
            "ATVVAPKYTAIKPLGDRVLVK\n",
            ">nonamp5_30_854\n",
            "APGDLLWSDEFDGAAGSAPNP\n",
            ">nonamp5_30_855\n",
            "GVLDILKNAAKNILAHAAEQI\n",
            ">nonamp5_30_856\n",
            "IIGGDECNINEHPFLVALYDA\n",
            ">nonamp5_30_857\n",
            "GLLGSIGNAIGAFIANKLKPK\n",
            ">nonamp5_30_858\n",
            "KNGTVKWFNAEKGFGFITSED\n",
            ">nonamp5_30_859\n",
            "GLLASLGKVFGGYLAEKLKPK\n",
            ">nonamp5_30_860\n",
            "QHSTDYDEEEEDRAKLHLDAR\n",
            ">nonamp5_30_861\n",
            "IVGGTAADISQFPHQLSLQTT\n",
            ">nonamp5_30_862\n",
            "ADETCTDLTILTTQYIAGDFD\n",
            ">nonamp5_30_863\n",
            "MLISGTAFLRLRTNRKAFPTP\n",
            ">nonamp5_30_864\n",
            "EQQCTPGQTKKEDCNNCTSGD\n",
            ">nonamp5_30_865\n",
            "GLLDFVTGVGKDIFAQLIKQI\n",
            ">nonamp5_30_866\n",
            "MIPAAFDYVAPSTVDEAVQAL\n",
            ">nonamp5_30_867\n",
            "FKGGGPYGQGVTRGQDLSGKDF\n",
            ">nonamp5_30_868\n",
            "GAYGQGQNIGQLFVNILIFLFY\n",
            ">nonamp5_30_869\n",
            "IVGGYECEAYSKPYQVSINLGY\n",
            ">nonamp5_30_870\n",
            "SGGGKEAAETFNRVESHPRPDA\n",
            ">nonamp5_30_871\n",
            "ESQKVQGDVIGVDLGTTYSCVA\n",
            ">nonamp5_30_872\n",
            "SAALAGTIIDGASLGFDILNKV\n",
            ">nonamp5_30_873\n",
            "TQLEAACPNVVSCADILALAAR\n",
            ">nonamp5_30_874\n",
            "LKCEWDGLVGTRGEIAKETIER\n",
            ">nonamp5_30_875\n",
            "KNWAVLVAGSDGLPNYRHHADV\n",
            ">nonamp5_30_876\n",
            "AGDDETLLKPVLNSLDNLVSGL\n",
            ">nonamp5_30_877\n",
            "EQLIELVGPWKTVYIVHFNGET\n",
            ">nonamp5_30_878\n",
            "CPAIQRCCQQLRNIQPPCRCCQ\n",
            ">nonamp5_30_879\n",
            "SIKEKICKIIEAKIGKKPPFCP\n",
            ">nonamp5_30_880\n",
            "FVGAALKVLANVLPPVISWIKQ\n",
            ">nonamp5_30_881\n",
            "MEFVAKLFKFFKDLLGKFLGNY\n",
            ">nonamp5_30_882\n",
            "GLSRSCFGVKLDRIGSMSGLGC\n",
            ">nonamp5_30_883\n",
            "VTFVEGGPMKYSLIEGDALANK\n",
            ">nonamp5_30_884\n",
            "MSKRAMKKIIPLITLFVVTLVG\n",
            ">nonamp5_30_885\n",
            "FKSWSFCTPGCAKTGSFNSYCC\n",
            ">nonamp5_30_886\n",
            "QRFIHPTYRPPPQPRRPVIMRA\n",
            ">nonamp5_30_887\n",
            "MNRIGMITTIITTTITTGNGAG\n",
            ">nonamp5_30_888\n",
            "SNVCFNACMKISSSQKTCQILC\n",
            ">nonamp5_30_889\n",
            "GLWEKVKEKANELVSGIVEGVK\n",
            ">nonamp5_30_890\n",
            "ALPKKLKYLNLFNDGFNYMGVV\n",
            ">nonamp5_30_891\n",
            "SASPGLPKGEKEQQEAIEHIDE\n",
            ">nonamp5_30_892\n",
            "FIHHIFRGIVHAGRSIGRFLTG\n",
            ">nonamp5_30_893\n",
            "AAPGALEVLETSPDSFEDGSET\n",
            ">nonamp5_30_894\n",
            "FIGSALKVLAGVLPSIVSWVKQ\n",
            ">nonamp5_30_895\n",
            "IILELAAVDSASGKLLINGNFK\n",
            ">nonamp5_30_896\n",
            "TNTPEQQCYLQAKCYIEFYVVV\n",
            ">nonamp5_30_897\n",
            "MSIADLKSRLIKASTSKMTAEL\n",
            ">nonamp5_30_898\n",
            "FVPIFTHSELQKIREKERNKGQ\n",
            ">nonamp5_30_899\n",
            "VVSQYHELVVQARLSEQELEFR\n",
            ">nonamp5_30_900\n",
            "ANIVFDVESATTGTYSTFLTSF\n",
            ">nonamp5_30_901\n",
            "GLWEKIKEKASELVSGIVEGVK\n",
            ">nonamp5_30_902\n",
            "MSPLKAVAVLTGADVKGVVQFT\n",
            ">nonamp5_30_903\n",
            "MVPVPVHHMADELLRNGPDTVI\n",
            ">nonamp5_30_904\n",
            "SNKKNYQKEIVDKHNALRRSVK\n",
            ">nonamp5_30_905\n",
            "IDAFQDTLYTHTLRTYLGRPWK\n",
            ">nonamp5_30_906\n",
            "MLHHMTSRANLLLLRRGGSQRS\n",
            ">nonamp5_30_907\n",
            "FYAGLILTLVNTFPYNISPASS\n",
            ">nonamp5_30_908\n",
            "ITACLDPDGWKEPGPLPGISTK\n",
            ">nonamp5_30_909\n",
            "QGYGFNEPEQTRNQGGSSWEAP\n",
            ">nonamp5_30_910\n",
            "FALESFWDGKGNASAHAMEMTK\n",
            ">nonamp5_30_911\n",
            "LGALGCVFPELLSGNGVKFGYA\n",
            ">nonamp5_30_912\n",
            "MRYISLNTTIITTTETTGYGAG\n",
            ">nonamp5_30_913\n",
            "PVLQVVRDIHGDILTPDSRYIL\n",
            ">nonamp5_30_914\n",
            "MRNISLTTTIITTTDTTGNGAG\n",
            ">nonamp5_30_915\n",
            "MEFVAKLFKFFKDLLGKFLGNN\n",
            ">nonamp5_30_916\n",
            "GLLGGLLGPLLGGGGGGGGGLL\n",
            ">nonamp5_30_917\n",
            "AVWQFREMIKCTIPPSDDLLDF\n",
            ">nonamp5_30_918\n",
            "GLIQTIKEKLKELAGGLVTGIQS\n",
            ">nonamp5_30_919\n",
            "GPSTDLVIGNKGFDGGIDSAILR\n",
            ">nonamp5_30_920\n",
            "MTPPENKNLVQENKELIQEVLKA\n",
            ">nonamp5_30_921\n",
            "SLLQFNKMIKFETRKNAIPFYAF\n",
            ">nonamp5_30_922\n",
            "GCRQCGGGCNKHGKCINGKCKCY\n",
            ">nonamp5_30_923\n",
            "SIQVIVVTDGERGLIYPPLSNIR\n",
            ">nonamp5_30_924\n",
            "SLVELGKMILQETGKNPVTYGAY\n",
            ">nonamp5_30_925\n",
            "MWTKPAYTDLRIGFEVTMYFANR\n",
            ">nonamp5_30_926\n",
            "MVTMVKKWLLLMTFMAGCRGMIY\n",
            ">nonamp5_30_927\n",
            "DDLFNINAGIVKLFGVTTLDVVR\n",
            ">nonamp5_30_928\n",
            "FLPLVRGAAKLIPSVVCAISKRC\n",
            ">nonamp5_30_929\n",
            "ENFVGGCTPGYQRTADGRCKPTF\n",
            ">nonamp5_30_930\n",
            "MWTKPAFEDIRLGFEITMYAAVE\n",
            ">nonamp5_30_931\n",
            "GLWQLIKDKFKDAATGFVTGIQS\n",
            ">nonamp5_30_932\n",
            "MWTKPSYTDLRIGFEVTLYFANR\n",
            ">nonamp5_30_933\n",
            "KAEEEVEKNKEEAEEKAEKKIAE\n",
            ">nonamp5_30_934\n",
            "MWKKPAFIDLRLGLEVTLYISNR\n",
            ">nonamp5_30_935\n",
            "RLKVIPEKLKDVKLVCTDVFGDN\n",
            ">nonamp5_30_936\n",
            "GLWQKIKNAAGDLASGIVEGIKS\n",
            ">nonamp5_30_937\n",
            "MWTKPAYTDLRIGFEVTMYFASR\n",
            ">nonamp5_30_938\n",
            "NLMQFETLIMKVAGRSGVWYYGS\n",
            ">nonamp5_30_939\n",
            "EQCGRQAGGATCPNNLCCSQYGY\n",
            ">nonamp5_30_940\n",
            "MDKLAAGGLYLLFLLLAGIIVTH\n",
            ">nonamp5_30_941\n",
            "ENFAGGCATGYLRTADGRCKPTF\n",
            ">nonamp5_30_942\n",
            "VAIIIYSMYGHIAKYGNFPGQWK\n",
            ">nonamp5_30_943\n",
            "GLLQTIKEKLKELATGLVIGVQS\n",
            ">nonamp5_30_944\n",
            "ALWKDILKNAGKAALNEINQIVQ\n",
            ">nonamp5_30_945\n",
            "GLLQTIKEKLKEFAGGVVTGVQS\n",
            ">nonamp5_30_946\n",
            "SVLEIGLMLQEETEKNPKTSYSI\n",
            ">nonamp5_30_947\n",
            "GINTLKKVIQGLHEVIKLVSNHE\n",
            ">nonamp5_30_948\n",
            "GLWQKIKSAAGDLASGIVEGIKS\n",
            ">nonamp5_30_949\n",
            "HLLQFNKMIKFETRKNAIPFYAF\n",
            ">nonamp5_30_950\n",
            "NEESDLIADKFTNYNKLIRPAKH\n",
            ">nonamp5_30_951\n",
            "ENFAGGCTPGYQRTADGRCKPTF\n",
            ">nonamp5_30_952\n",
            "MLYANPNTESSPVGFRKKYDNFI\n",
            ">nonamp5_30_953\n",
            "SIPASQKANLGNQMIMAVACYQN\n",
            ">nonamp5_30_954\n",
            "NLVQLGKMIFQETGKNPATSYGL\n",
            ">nonamp5_30_955\n",
            "DVNGGWSCATTVDAKFRPNGCTD\n",
            ">nonamp5_30_956\n",
            "KHTLPDLPYDFGALQPHISAEIM\n",
            ">nonamp5_30_957\n",
            "NLLQFENMIRNVAGRSGIWWYSD\n",
            ">nonamp5_30_958\n",
            "LWTRDYAGVYEAIRGFDWSQDAK\n",
            ">nonamp5_30_959\n",
            "YMVIQGEPGAVIRLGDYLIDQGL\n",
            ">nonamp5_30_960\n",
            "SENTGAIGKVFPRGNHWAVGHLM\n",
            ">nonamp5_30_961\n",
            "QYVKDPDKQVVARIFLDLQLVQR\n",
            ">nonamp5_30_962\n",
            "NLMQFELLIMKVAGRSGIVWYSD\n",
            ">nonamp5_30_963\n",
            "KAEEEVEKNKEEAEEEAEKKIAE\n",
            ">nonamp5_30_964\n",
            "ALWKNMLKGIGKLAGKAALGAVK\n",
            ">nonamp5_30_965\n",
            "SVIELGKMILQETGKNPVTHYGA\n",
            ">nonamp5_30_966\n",
            "GLWQLIKDKLKDAATGFVTGIQS\n",
            ">nonamp5_30_967\n",
            "SLIQFETLIMKVAGQSGMFSYSA\n",
            ">nonamp5_30_968\n",
            "GINTLKKVIQGLHEVIKLVSNHA\n",
            ">nonamp5_30_969\n",
            "NCPYCVVYCCPPAYCEASGCRPP\n",
            ">nonamp5_30_970\n",
            "PAKQVAFAEHAREKMLRGVNVLA\n",
            ">nonamp5_30_971\n",
            "ENFAGGCTPGYQRTADGRCKATF\n",
            ">nonamp5_30_972\n",
            "ANQRLPPLSNDPDRCERAFVGNT\n",
            ">nonamp5_30_973\n",
            "ARCEQCPSYCCQSDSPPECDGCE\n",
            ">nonamp5_30_974\n",
            "ENFAVGCTPGYQRTADGRCKPTF\n",
            ">nonamp5_30_975\n",
            "GFGEDIAMKQHQVNSLLDILFVF\n",
            ">nonamp5_30_976\n",
            "GLFGVLAKVASHVVPAIAEHFQA\n",
            ">nonamp5_30_977\n",
            "VFQFLGRIIHHVGNFVHGFSHVF\n",
            ">nonamp5_30_978\n",
            "MVKIGINEFGRIGRLAFRRIYEL\n",
            ">nonamp5_30_979\n",
            "ENFAGGCIPGYMRTADGRCKPTY\n",
            ">nonamp5_30_980\n",
            "VIPFVASVAAEMQHVYCAASRKC\n",
            ">nonamp5_30_981\n",
            "MSILPLVHAMANVRGDIEYLTEA\n",
            ">nonamp5_30_982\n",
            "HDRPKFCYLPADPGECLAHMRSF\n",
            ">nonamp5_30_983\n",
            "ENFAGGCATGFLRTADGRCKPTF\n",
            ">nonamp5_30_984\n",
            "ENFSGGCIPGYMRTADGRCKPTY\n",
            ">nonamp5_30_985\n",
            "GFRDVLKGAAKAFVKTVAGHIAN\n",
            ">nonamp5_30_986\n",
            "PNIQTKIIEQIWKEHIFQGTVVK\n",
            ">nonamp5_30_987\n",
            "LPASVDWRKEGAVLPIRHQGQCG\n",
            ">nonamp5_30_988\n",
            "NLVQFELLIMKVAKRSGLLSYSA\n",
            ">nonamp5_30_989\n",
            "FLPLLAGLAANFFPKIFCKITRKC\n",
            ">nonamp5_30_990\n",
            "GFKDWIKGAAKKLIKTVASSIANE\n",
            ">nonamp5_30_991\n",
            "MALNLQDKQAIVAEVSEVAKGALS\n",
            ">nonamp5_30_992\n",
            "SGGKKIKVDKPLGLGGGLTVDIDA\n",
            ">nonamp5_30_993\n",
            "FLPFIAGMAANFLPKIFCAISKKC\n",
            ">nonamp5_30_994\n",
            "SAKDVKFGDSARSMMIAGVNVIAD\n",
            ">nonamp5_30_995\n",
            "SLGGKPDLRPCYPPCHYIPRPKPR\n",
            ">nonamp5_30_996\n",
            "MAWTKPAYTDLRIGFEVTMYFASR\n",
            ">nonamp5_30_997\n",
            "MARRGFSCLLLSTTATDLPVKRRT\n",
            ">nonamp5_30_998\n",
            "ATIEVYNILPYYYYVSKAWSWNGN\n",
            ">nonamp5_30_999\n",
            "VTSWSLCTPGCTSPGGGSNCSFCC\n",
            ">nonamp5_30_1000\n",
            "FLPAVIRVAANVLPTVFCAISKKC\n",
            ">nonamp5_30_1001\n",
            "MDTQGFSCLLLLISEIDLSVKRRI\n",
            ">nonamp5_30_1002\n",
            "GFKDWIKGAAKKLIKTVAANIANQ\n",
            ">nonamp5_30_1003\n",
            "MNPCSSNCSCGASCTCSGCSSHKK\n",
            ">nonamp5_30_1004\n",
            "GLNTLKKVFQGLHEAIKLINNHVQ\n",
            ">nonamp5_30_1005\n",
            "MKKAERGASPKQIKPHRYYLLAVH\n",
            ">nonamp5_30_1006\n",
            "SEAENDLMNKLFTAYNPKVRPAEK\n",
            ">nonamp5_30_1007\n",
            "FQPSLVLDMAQVLLDNYTFPENLM\n",
            ">nonamp5_30_1008\n",
            "MNGRPSVFTSQDYLSDHLWRALNA\n",
            ">nonamp5_30_1009\n",
            "MTWTTPAYTELRLGFEITMYIANR\n",
            ">nonamp5_30_1010\n",
            "FLPAVLRVAAQVVPTVFCAISKKC\n",
            ">nonamp5_30_1011\n",
            "LTNKTARFLVNGTSIPEVDFDVGE\n",
            ">nonamp5_30_1012\n",
            "FFPAIFRLVAKVVPSIICSVTKKC\n",
            ">nonamp5_30_1013\n",
            "FLPIIASVAAKVFPKIFCAISKKC\n",
            ">nonamp5_30_1014\n",
            "FMGGLIKAATKIVPAAYCAITKKC\n",
            ">nonamp5_30_1015\n",
            "AEEQSFSSTKFSTDQPNLILQGDA\n",
            ">nonamp5_30_1016\n",
            "FMGGLIKAATKALPAAFCAITKKC\n",
            ">nonamp5_30_1017\n",
            "MNVQFTVNGRAASIDVPPNTLLVQ\n",
            ">nonamp5_30_1018\n",
            "FLPLLAGLAANFLPKIFCKITRKC\n",
            ">nonamp5_30_1019\n",
            "GFRDVLKGAAKAFVKTVAGHIANI\n",
            ">nonamp5_30_1020\n",
            "GVTSNPAIFQKAISTSNAYNDQFR\n",
            ">nonamp5_30_1021\n",
            "GFRDVLKGAAKQFVKTVAGHIANI\n",
            ">nonamp5_30_1022\n",
            "FLPAIVGAAGKFLPKIFCAISKKC\n",
            ">nonamp5_30_1023\n",
            "SNGSNIDVAGAVNTLVETAGKLFQ\n",
            ">nonamp5_30_1024\n",
            "LEEQSFSFTKFSTDQQNLILQAHY\n",
            ">nonamp5_30_1025\n",
            "MATGGFGCLLLLIREIDLSVKRQI\n",
            ">nonamp5_30_1026\n",
            "DLFQVIKEKLKELTGGVIEGIQGV\n",
            ">nonamp5_30_1027\n",
            "LLKELWTKMKGAGKAVLGKIKGLL\n",
            ">nonamp5_30_1028\n",
            "FLPVVAGLAAKVLPSIICAVTKKC\n",
            ">nonamp5_30_1029\n",
            "MRWKWIKKRIRRLKRQRKKERGLI\n",
            ">nonamp5_30_1030\n",
            "GNAPAADMVLKAPGDAKMTKTAVP\n",
            ">nonamp5_30_1031\n",
            "MAKEQQVQANDLQEKLIAVNRVAK\n",
            ">nonamp5_30_1032\n",
            "MTPRGFSCLLLPTSETDLPVKRRT\n",
            ">nonamp5_30_1033\n",
            "GFLDKLKKGASDFANALVNSIKGT\n",
            ">nonamp5_30_1034\n",
            "LSAMLEDTENWLYEELSLTQDPVV\n",
            ">nonamp5_30_1035\n",
            "AFANTGVEIVSIDTYLFSLYDEDK\n",
            ">nonamp5_30_1036\n",
            "FNALGLSTRDLVALSGAHTIGQAR\n",
            ">nonamp5_30_1037\n",
            "KFKVVTTFTVIQDIAQNVAGDAAT\n",
            ">nonamp5_30_1038\n",
            "MPGKVQDFFLCSLLLRIVSAGWCD\n",
            ">nonamp5_30_1039\n",
            "NLMQFELLIMKVAGRSGIVWYSDY\n",
            ">nonamp5_30_1040\n",
            "MPGKVQDFFLCSLLLCIVSAGWCG\n",
            ">nonamp5_30_1041\n",
            "FLPMLAGLAASMVPKFVCLITKKC\n",
            ">nonamp5_30_1042\n",
            "FLPAIVGAAGQFLPKIFCAISKKC\n",
            ">nonamp5_30_1043\n",
            "AQTPVKVTVTGAAGQIGYALLFRI\n",
            ">nonamp5_30_1044\n",
            "AVITGACERDVQCGGGTCCAVSLI\n",
            ">nonamp5_30_1045\n",
            "THPSVLPFIKQLIGTMDSVRGLPR\n",
            ">nonamp5_30_1046\n",
            "PEEVHHGEEEVETFAFQAEIAQLM\n",
            ">nonamp5_30_1047\n",
            "GIKDWIKGAAKKLIKTVASHIANQ\n",
            ">nonamp5_30_1048\n",
            "FLPILASLAAKFGPKLFCLVTKKC\n",
            ">nonamp5_30_1049\n",
            "MRITVNVDGTSYTDEVEPRTLLVH\n",
            ">nonamp5_30_1050\n",
            "FLPAVLRVAAKIVPTVFCAISKKC\n",
            ">nonamp5_30_1051\n",
            "YTATRDNCCILDERFGSYCPTTCG\n",
            ">nonamp5_30_1052\n",
            "FLPFIAGMAAKFLPKIFCAISKKC\n",
            ">nonamp5_30_1053\n",
            "YIELAVVADHGIFTKYNSNLNTIR\n",
            ">nonamp5_30_1054\n",
            "FLPAIVGAAAKFLPKIFCVISKKC\n",
            ">nonamp5_30_1055\n",
            "MAPRGFSCLLLLTSEIDLPVKRRA\n",
            ">nonamp5_30_1056\n",
            "GLFKVLGSVAKHLLPHVAPVIAEK\n",
            ">nonamp5_30_1057\n",
            "VGGLIAYDNIEISQIPVGDGVTLC\n",
            ">nonamp5_30_1058\n",
            "MLKLHGFSVSNYYNMVKLALLEKG\n",
            ">nonamp5_30_1059\n",
            "FLPAVLRVAAKVVPTVFCLISKKC\n",
            ">nonamp5_30_1060\n",
            "GLFSVLGAVAKHVLPHVVPVIAEK\n",
            ">nonamp5_30_1061\n",
            "LFGFLIPLLPHIIGAIPQVIGAIR\n",
            ">nonamp5_30_1062\n",
            "MAPRGFSCLLLSTSEIDLPVKRRA\n",
            ">nonamp5_30_1063\n",
            "FLPIIASVAANVFSKIFCAISKKC\n",
            ">nonamp5_30_1064\n",
            "GLLNGLALRLGKRALKKIIKRLCR\n",
            ">nonamp5_30_1065\n",
            "MAPRGFSCLLLSTSEIDLPVKRRT\n",
            ">nonamp5_30_1066\n",
            "RHHRKRIGHTVKQLAKLVKHIHEY\n",
            ">nonamp5_30_1067\n",
            "GFKDWIKGAAKKLIKTVASAIANQ\n",
            ">nonamp5_30_1068\n",
            "GLNALKKVFQGIHEAIKLINNHVQ\n",
            ">nonamp5_30_1069\n",
            "MATRGFSCLLLVISEIDLSVKRWV\n",
            ">nonamp5_30_1070\n",
            "MATPGFSCLLLSTSEIDLPMKRRV\n",
            ">nonamp5_30_1071\n",
            "KQFTKCELSQVLKDMDGYGGIALP\n",
            ">nonamp5_30_1072\n",
            "RHHRKRIGHTIKQLAKLVKHIHEY\n",
            ">nonamp5_30_1073\n",
            "GLVSSIGRALGGLLADVVKSKQPA\n",
            ">nonamp5_30_1074\n",
            "DQAAGVAAIIEIDNIFSESEVISK\n",
            ">nonamp5_30_1075\n",
            "FLPMLAGLAASMVPKLVCLITKKC\n",
            ">nonamp5_30_1076\n",
            "ASGPCFPNPCQNDGECHVIDDSHR\n",
            ">nonamp5_30_1077\n",
            "FENKVPEKQKLFQEDNGIPVHLKG\n",
            ">nonamp5_30_1078\n",
            "TPDHREVPSFSSRWEPNFGLTFSK\n",
            ">nonamp5_30_1079\n",
            "EDDHHHHHHHHHGVGGGGGGGGGG\n",
            ">nonamp5_30_1080\n",
            "AKDVRFGADVRALMLQGVDVLADA\n",
            ">nonamp5_30_1081\n",
            "MMWTKPEVTEMRFGFEVTMYVCNR\n",
            ">nonamp5_30_1082\n",
            "GLFKVLGSVAKHLLPHVVPVIAEK\n",
            ">nonamp5_30_1083\n",
            "FLPLLAGLAANFLPTIICKISYKC\n",
            ">nonamp5_30_1084\n",
            "VGTRVVRIEDQQLITQGGTYVEDL\n",
            ">nonamp5_30_1085\n",
            "MSWTKPAYTDLRIGFEVTMYFASR\n",
            ">nonamp5_30_1086\n",
            "MSMGIAARPPRAALLPPPSVPRSR\n",
            ">nonamp5_30_1087\n",
            "MNNTEFYDRLGVSKDASQDEIKKA\n",
            ">nonamp5_30_1088\n",
            "SHGKQETDEEFDARWVTYFNKSDI\n",
            ">nonamp5_30_1089\n",
            "FLPFIARLAAKVFPSIICSVTKKC\n",
            ">nonamp5_30_1090\n",
            "REVCELNPDCDELADHIGFQEAYR\n",
            ">nonamp5_30_1091\n",
            "MRWEKPSYNDMRFGFEVTMYIYNR\n",
            ">nonamp5_30_1092\n",
            "GLFGVLGSIAKHVLPHVVPVIAEK\n",
            ">nonamp5_30_1093\n",
            "MTRSLKKNPFVANHLLNKIDKLNT\n",
            ">nonamp5_30_1094\n",
            "RRRRRRRRHRRRRGRRGRRSRGRR\n",
            ">nonamp5_30_1095\n",
            "AQITLTNKASYTVTPPAQANAADA\n",
            ">nonamp5_30_1096\n",
            "FLPAIAGVAAKFLPKIFCAISKKC\n",
            ">nonamp5_30_1097\n",
            "VEQDPYEIVIKQLERAAQYMEISE\n",
            ">nonamp5_30_1098\n",
            "FWGALAKGALKLIPSLFSSFSKKD\n",
            ">nonamp5_30_1099\n",
            "FLPILASLAATLGPKLLCLITKKC\n",
            ">nonamp5_30_1100\n",
            "KFGKVLKFLAKTLAKHLAKKQAQS\n",
            ">nonamp5_30_1101\n",
            "KDALEHTGFAPKKDGEEHVEWNYN\n",
            ">nonamp5_30_1102\n",
            "GIGALSAKGALKGLAKGLAEHFAN\n",
            ">nonamp5_30_1103\n",
            "APKNIVLFGATGMTGQVTLGQALE\n",
            ">nonamp5_30_1104\n",
            "ADNKNPLEECFRETNYEEFLEIAR\n",
            ">nonamp5_30_1105\n",
            "MTKKAVVVLWGISQVEGVVNLLQE\n",
            ">nonamp5_30_1106\n",
            "MNILHICVTSKWFNIDNKIVDHRP\n",
            ">nonamp5_30_1107\n",
            "FLPIIASVAAKVFSKIFCAISKKC\n",
            ">nonamp5_30_1108\n",
            "FLPAIAGMAAKFLPKIFCAISKKC\n",
            ">nonamp5_30_1109\n",
            "MKKARRSPSRRKGARLWYVGGSQF\n",
            ">nonamp5_30_1110\n",
            "VVNGKPTRTNVGRMVSLKYRNKHI\n",
            ">nonamp5_30_1111\n",
            "FLPVLAGIAAKVVPALFCKITKKC\n",
            ">nonamp5_30_1112\n",
            "SLGGKPDLRPCHPPCHYIPRPKPR\n",
            ">nonamp5_30_1113\n",
            "FFPIVAGVAGQVLKKIYCTISKKC\n",
            ">nonamp5_30_1114\n",
            "MATRRFSCLLLSTSEIDLSVKRRI\n",
            ">nonamp5_30_1115\n",
            "AVLDTALSGIDKVLHGSIDAHKAD\n",
            ">nonamp5_30_1116\n",
            "FLPILASLAAKLGPKLFCLVTKKC\n",
            ">nonamp5_30_1117\n",
            "FLPIIAGVAAKVFPKIFCAISKKC\n",
            ">nonamp5_30_1118\n",
            "FLPAIFRMAAKVVPTIICSITKKC\n",
            ">nonamp5_30_1119\n",
            "SEDETRLVKNLFSGYNKVVRPVNH\n",
            ">nonamp5_30_1120\n",
            "NNYCKIKCRSGIHTLCKYGTSSKP\n",
            ">nonamp5_30_1121\n",
            "MKWETPTATDLRFGFEITMYVSAR\n",
            ">nonamp5_30_1122\n",
            "FWGALIKGAAKLIPSVVGLFKKKQ\n",
            ">nonamp5_30_1123\n",
            "SPCTCSTCNCAGACNSCSCTSCSH\n",
            ">nonamp5_30_1124\n",
            "LLKELWTKIKGAGKAVLGKIKGLL\n",
            ">nonamp5_30_1125\n",
            "MTWSKPAYTDLRIGFEVTMYFASR\n",
            ">nonamp5_30_1126\n",
            "VVAAGANPVLITRDLVNVLEDAIR\n",
            ">nonamp5_30_1127\n",
            "MQWTKPAFTDLRIGFEVTMYFEAR\n",
            ">nonamp5_30_1128\n",
            "VIPFVASVAAEMMQHVYCAASRRC\n",
            ">nonamp5_30_1129\n",
            "KLGEFSPTRTYRGHNKKDKKMQKK\n",
            ">nonamp5_30_1130\n",
            "FLPFIAGVAAKFLPKIFCAISKKC\n",
            ">nonamp5_30_1131\n",
            "GLLSSLSSVAKHVLPHVVPVIAEHL\n",
            ">nonamp5_30_1132\n",
            "GLWSKIKEAAKTAGLMAMGFVNDMV\n",
            ">nonamp5_30_1133\n",
            "MADAAVHGHGDHHDTRGFFTRWFMS\n",
            ">nonamp5_30_1134\n",
            "SMLSVLKNLGKVGLGLVACKINKQC\n",
            ">nonamp5_30_1135\n",
            "GHKLGEFAPTRTFRGHKKEDKKVKR\n",
            ">nonamp5_30_1136\n",
            "SKTPIRVAVTGAAGNIGYHLLFRIA\n",
            ">nonamp5_30_1137\n",
            "SVYYGSIEAGGTKFVLAIADEHFNI\n",
            ">nonamp5_30_1138\n",
            "MIINNNISALNANRQLNLTGNSMTK\n",
            ">nonamp5_30_1139\n",
            "MENGKVHVASMSGLSMPHMNEMLEK\n",
            ">nonamp5_30_1140\n",
            "APVENQGSFPKMFPRGSHWAVGHLM\n",
            ">nonamp5_30_1141\n",
            "GGPAGKQNAVNQLLVLIYDPKSYKD\n",
            ">nonamp5_30_1142\n",
            "FQPSLVLDTAKILLDNYTFPESLMG\n",
            ">nonamp5_30_1143\n",
            "VIGGTNASPGEIPWQLSQQRQSGSW\n",
            ">nonamp5_30_1144\n",
            "GLVSSIGRALGGLLADVVKSKGQPA\n",
            ">nonamp5_30_1145\n",
            "MRAKWKKKRMRRLKRKRRKMRQRSK\n",
            ">nonamp5_30_1146\n",
            "HSDAVFTDNYSRFRKQMAAKKYLNS\n",
            ">nonamp5_30_1147\n",
            "MKKSIRRSGGKSKGARLWYVGGTQY\n",
            ">nonamp5_30_1148\n",
            "VTIGPVCELPKEVGGPCRGHIIPRY\n",
            ">nonamp5_30_1149\n",
            "GLVSSIGKALGGLLADVVKSKGQPA\n",
            ">nonamp5_30_1150\n",
            "MNEQSMKPYVIGLDLGGTNSVFGIV\n",
            ">nonamp5_30_1151\n",
            "NWRKILGQIASVGAGLLGSLLAGYE\n",
            ">nonamp5_30_1152\n",
            "GDCGCSGASSCTCASGQCTCSGCGK\n",
            ">nonamp5_30_1153\n",
            "LLEGFLVGGGVPGPGTACLTKALKD\n",
            ">nonamp5_30_1154\n",
            "ENFSGGCVAGYMRTPDGRCKPTFYQ\n",
            ">nonamp5_30_1155\n",
            "GIGAAILSAGKSIIKGLANGLAEHF\n",
            ">nonamp5_30_1156\n",
            "GLMSSIGKALGGLIVDVLKPKTPAS\n",
            ">nonamp5_30_1157\n",
            "AEIDFSGIPEDIIKEIKETNAKPPA\n",
            ">nonamp5_30_1158\n",
            "GLLSVLGSVVKHVIPHVVPVIAEHL\n",
            ">nonamp5_30_1159\n",
            "MNRLLQRQLFLENLLVGVNSTFHQM\n",
            ">nonamp5_30_1160\n",
            "GLLGVLGSVAKHVLPHVVPVIAEHL\n",
            ">nonamp5_30_1161\n",
            "GLWSKIKEAAKTAGKAAMGFVNEMV\n",
            ">nonamp5_30_1162\n",
            "HVGGDECNINEHRSLVAIFVFTEFF\n",
            ">nonamp5_30_1163\n",
            "MREKWKKKRSRRLRRKRRKMRARSK\n",
            ">nonamp5_30_1164\n",
            "FKVDEEFQGPIVSQNRRYFLFRPRN\n",
            ">nonamp5_30_1165\n",
            "MFSLSNSQYTCQDYISDHIWKTSSH\n",
            ">nonamp5_30_1166\n",
            "ITAGFISSSANTVYVKKGDVMVFPR\n",
            ">nonamp5_30_1167\n",
            "WLGSALKIGAKLLPSVVGLFQKKKK\n",
            ">nonamp5_30_1168\n",
            "DCPSDWSNHEGHCYRVFNEWMNWAD\n",
            ">nonamp5_30_1169\n",
            "KLKNFAKGVAQSLLNKASCKLSGQC\n",
            ">nonamp5_30_1170\n",
            "GLLSVLGSVAKHVLPHVVPVIAEKL\n",
            ">nonamp5_30_1171\n",
            "LVLPEVYDQDGHPLRIGQRYIINNP\n",
            ">nonamp5_30_1172\n",
            "SMLSVLKNLGKVGLGFVACKINKQC\n",
            ">nonamp5_30_1173\n",
            "LFGFLIKLIPSLFGALSNIGRNRNQ\n",
            ">nonamp5_30_1174\n",
            "MRDKWRKKRVRRLKRKRRKMRARSK\n",
            ">nonamp5_30_1175\n",
            "GLVSSIGRALGGLLADVVKSKEQPA\n",
            ">nonamp5_30_1176\n",
            "KLQELRMWSMLKKWILMFILDFPTR\n",
            ">nonamp5_30_1177\n",
            "RSVCRQIKICRRRGGCYYKCTNRPY\n",
            ">nonamp5_30_1178\n",
            "MVSEAIAALKEREGSSEFAIGKKKE\n",
            ">nonamp5_30_1179\n",
            "MREAICIHIGQAGYQIGNACSQLFC\n",
            ">nonamp5_30_1180\n",
            "HAKDVVFGGEARARMVEGVNILANA\n",
            ">nonamp5_30_1181\n",
            "WLGSALKIGAKLLPSVVGLFKKKKQ\n",
            ">nonamp5_30_1182\n",
            "MKLLILFLAALGAASARIRGHTIKG\n",
            ">nonamp5_30_1183\n",
            "GLLDIVTGLLGNLIVDVLKPKTPAS\n",
            ">nonamp5_30_1184\n",
            "MRAKWRKKRVRRLKRKRRKVRARSK\n",
            ">nonamp5_30_1185\n",
            "ANFPTVSLNTVGITRQIPQDFMNAV\n",
            ">nonamp5_30_1186\n",
            "ANIVGGIEYSINNASICSVGFSVTR\n",
            ">nonamp5_30_1187\n",
            "FRLDEEFQGPIASQVRRQFLFRPRN\n",
            ">nonamp5_30_1188\n",
            "MESIEQRVKKIVAEQLGVAEAEIKA\n",
            ">nonamp5_30_1189\n",
            "GLWDDLKAAAKKVVSSLASAAIEKL\n",
            ">nonamp5_30_1190\n",
            "QEDIEAGKQKSATCTACHGQEGNST\n",
            ">nonamp5_30_1191\n",
            "ISCQDVKQSLAPCLPYVTGRAPKPA\n",
            ">nonamp5_30_1192\n",
            "FNAGGHINHSLFWQNLAPASSNEAK\n",
            ">nonamp5_30_1193\n",
            "GLFSVLGAVAKHVLPHVVPVIAEKL\n",
            ">nonamp5_30_1194\n",
            "TKSQTHVPIRPNKLVLKVQKDRATN\n",
            ">nonamp5_30_1195\n",
            "GLVASIGRALGGLLADVVKSKEQPA\n",
            ">nonamp5_30_1196\n",
            "FFGWLIKGAIHAGKAIHGLIHRRRH\n",
            ">nonamp5_30_1197\n",
            "MRAKWRKKRMRGLKRKRRKMRQRSK\n",
            ">nonamp5_30_1198\n",
            "LKPDEELQGPGGVLSRGYFVFRPRN\n",
            ">nonamp5_30_1199\n",
            "AKKRAGNGCFGLKLDRIGSMSGLGC\n",
            ">nonamp5_30_1200\n",
            "GVLDILKGAAKDLAGHVATKVINKI\n",
            ">nonamp5_30_1201\n",
            "VATSEPNRYFNPYSYVELIITVDHS\n",
            ">nonamp5_30_1202\n",
            "MKRIGVLTSGGDSPGMNAAIRAVVR\n",
            ">nonamp5_30_1203\n",
            "MNERVKQVASALVDAIQKTLTEQRV\n",
            ">nonamp5_30_1204\n",
            "MDLSRIPPQPKAGILNVLIEIPAGS\n",
            ">nonamp5_30_1205\n",
            "VVVTLASGLEMCDTTTDGGGWTIFQ\n",
            ">nonamp5_30_1206\n",
            "IEHNAEEIRKTAIRTAVQNTAQQTK\n",
            ">nonamp5_30_1207\n",
            "MKNPRVHEIATAMIDAVRKVLVDHQ\n",
            ">nonamp5_30_1208\n",
            "MRAKWRKKRVRRLKRKRRKTRARSK\n",
            ">nonamp5_30_1209\n",
            "GLLSVLGSVAQHVLPHVVPVIAEHL\n",
            ">nonamp5_30_1210\n",
            "HVDKKVADKVLLLKQLRIMRLLTRL\n",
            ">nonamp5_30_1211\n",
            "FPVDEEFQSPFGSRSRGYFLFRPRN\n",
            ">nonamp5_30_1212\n",
            "MEFSPRAAELTTLLESRISNFYTNI\n",
            ">nonamp5_30_1213\n",
            "GVVDILKGAGKDLLAHLVGKISEKV\n",
            ">nonamp5_30_1214\n",
            "EQATLIDFGKLNADIVPDKNGGMTQ\n",
            ">nonamp5_30_1215\n",
            "SVINTQIKPFKTQAFKNGKFIEVTE\n",
            ">nonamp5_30_1216\n",
            "ATRVVYCNRRSGSVVGGDDTVYYEG\n",
            ">nonamp5_30_1217\n",
            "GLFKVLGSVAKHLLPHVAPIIAEKL\n",
            ">nonamp5_30_1218\n",
            "MGGVGKTKRMRRLKRKRRKMRQRSK\n",
            ">nonamp5_30_1219\n",
            "MRAKWRKKRMRRLKRKRRKMRARSK\n",
            ">nonamp5_30_1220\n",
            "MRAKWRKKRMRRLKRKRRKMRQRSK\n",
            ">nonamp5_30_1221\n",
            "MRAKWRKKRTRRLKRKRRKVRARSK\n",
            ">nonamp5_30_1222\n",
            "AEIDFSGIPEDIIKQIKETNAKPPA\n",
            ">nonamp5_30_1223\n",
            "LRNVEQQCRADALVERAQELIHGQQ\n",
            ">nonamp5_30_1224\n",
            "IISPPVCGNELLEEGEECDCGTPEN\n",
            ">nonamp5_30_1225\n",
            "GLLQTIKEKLESLESLAKGIVSGIQA\n",
            ">nonamp5_30_1226\n",
            "LLCISCCVSITECCQLMSGCAVEIKS\n",
            ">nonamp5_30_1227\n",
            "MIAPIFAELAKTVGADKDGLPTLVAK\n",
            ">nonamp5_30_1228\n",
            "RWAEIVCRSPSCNECCEWHTCFAPED\n",
            ">nonamp5_30_1229\n",
            "GIGAILKVLATGLPTLISWIKNKRKQ\n",
            ">nonamp5_30_1230\n",
            "RELLMGIFEKNGTGKTAAFVIPLLQK\n",
            ">nonamp5_30_1231\n",
            "RNEEERLINHLFKERGYNKELRPAQT\n",
            ">nonamp5_30_1232\n",
            "MKFYTIKLPKFLGGIVRAMLGSFRKD\n",
            ">nonamp5_30_1233\n",
            "VIDDLKKVAKKVRRELLCKKHHKKLN\n",
            ">nonamp5_30_1234\n",
            "ALWKNMLSGIGKLAGQAALGAVKTLV\n",
            ">nonamp5_30_1235\n",
            "FWGHIWNAVKRVGANALHGAVTGALS\n",
            ">nonamp5_30_1236\n",
            "FKAVRGERLVYSVKWEGGGKITTRIL\n",
            ">nonamp5_30_1237\n",
            "VGTALGSLAEELNGYNRKKGGFSFRF\n",
            ">nonamp5_30_1238\n",
            "GLWNKIKEAASKAAGKAALGFVNEMV\n",
            ">nonamp5_30_1239\n",
            "MLMPKRVKYRREHRGRMKGRAKAVRI\n",
            ">nonamp5_30_1240\n",
            "LTCLTKMVECIQLPLDVEDSSDTLCC\n",
            ">nonamp5_30_1241\n",
            "MGTTTMGVKLDDATRERIKSAASRID\n",
            ">nonamp5_30_1242\n",
            "MTATILVADDDAAIRTVLNQALSRAG\n",
            ">nonamp5_30_1243\n",
            "GLWKNMLSGIGKLAGEAALGAVKTLV\n",
            ">nonamp5_30_1244\n",
            "RALATQLPVIPRSQVTFLAPVTRPEK\n",
            ">nonamp5_30_1245\n",
            "MPSQKSPTKRSPTKRSPQKGGKGAKR\n",
            ">nonamp5_30_1246\n",
            "SPAPPACDPRLLNKLLRDDHVLHGRL\n",
            ">nonamp5_30_1247\n",
            "MAQDIISTISDLVKWIIDTVNKFTKK\n",
            ">nonamp5_30_1248\n",
            "DAAEPWQLGFQDAATPIMQGIIDLHH\n",
            ">nonamp5_30_1249\n",
            "RFRLPFRRPPIRIHPPPFYPPFRRFL\n",
            ">nonamp5_30_1250\n",
            "GLIGSIGKALGGLLVDVLKPKLQAAS\n",
            ">nonamp5_30_1251\n",
            "AAVPSGASTGVYEALELRFRAPVEPY\n",
            ">nonamp5_30_1252\n",
            "GIWGTLAKIGIKAVPRVISMLKKKKQ\n",
            ">nonamp5_30_1253\n",
            "MAWTAPKITEVPLGAEINSYVCGQKK\n",
            ">nonamp5_30_1254\n",
            "VDSEDLIEAFKIYVEDDNEHLQGSVD\n",
            ">nonamp5_30_1255\n",
            "VSCADILTMATRQFDNVYYKNLQQGK\n",
            ">nonamp5_30_1256\n",
            "GTGITEEFEEVPVQSRGFGILDVGYR\n",
            ">nonamp5_30_1257\n",
            "MTDCRYLIKRVIKIIIAVLQLILLFL\n",
            ">nonamp5_30_1258\n",
            "DGVCSNRRQCNKEVCGSSYDVAIVGA\n",
            ">nonamp5_30_1259\n",
            "MALKAVCVLKGAGETSGTVHFEQEDN\n",
            ">nonamp5_30_1260\n",
            "MGDCGCSGASSCNCGSGCSCSNCGSK\n",
            ">nonamp5_30_1261\n",
            "VKKEDELKELRTKTNEELNEEILQLK\n",
            ">nonamp5_30_1262\n",
            "FAVGTESIAKTFSEALDTTKISDVLSK\n",
            ">nonamp5_30_1263\n",
            "GFGSLFKFLGKKLAKTVAKQAAKKQME\n",
            ">nonamp5_30_1264\n",
            "HVVAAITALKERGGSSHQALKKYKAAN\n",
            ">nonamp5_30_1265\n",
            "QTCVSCVNFGNGFCGDNCGNSWACSGC\n",
            ">nonamp5_30_1266\n",
            "CYIQNCPRGGKRSYPDTAVPQCIPCGP\n",
            ">nonamp5_30_1267\n",
            "MVKTVAVMVGSLRKDSLAHKLMKVLQK\n",
            ">nonamp5_30_1268\n",
            "PVLAAASWALFNIGRLALQQFNKIASR\n",
            ">nonamp5_30_1269\n",
            "IPQDLSGKMLTFPKEEDDDDVKLMTPK\n",
            ">nonamp5_30_1270\n",
            "VPPVYADLGKGARDLFSKGYNYGFSKL\n",
            ">nonamp5_30_1271\n",
            "ALSILKGLEKLAKMGIALTNCKATKKC\n",
            ">nonamp5_30_1272\n",
            "CPRILMKCKLDTDCFPTCTCRPSGFCG\n",
            ">nonamp5_30_1273\n",
            "ARRRRRSSRPQRRRRRRRHGRRRRGRR\n",
            ">nonamp5_30_1274\n",
            "IEPERQEEEEEETRQRVRRGQVRQQQQ\n",
            ">nonamp5_30_1275\n",
            "GAGEALNAKRQQDVNHLLDLIYDHLHY\n",
            ">nonamp5_30_1276\n",
            "MAPCSCKSCGTSCAGSCTSCSCGSCSH\n",
            ">nonamp5_30_1277\n",
            "GFGSLFKFLGKKLLKTVAKQAAKKQME\n",
            ">nonamp5_30_1278\n",
            "HSDGTLTSELSRLRDRARLQRLLQGLL\n",
            ">nonamp5_30_1279\n",
            "MLVFQMRNVDKTSTVLKQTKNSDYADK\n",
            ">nonamp5_30_1280\n",
            "FMKVIDPGTKWCGPGNKAADDTDNGKN\n",
            ">nonamp5_30_1281\n",
            "VAPFPHGKLVTYKYIADVKAGVDPSLV\n",
            ">nonamp5_30_1282\n",
            "MDLIFPLVGSLLLVICVMVGVAFLTLL\n",
            ">nonamp5_30_1283\n",
            "SIFVLPDLPYAKDALPKISAKTFDFGK\n",
            ">nonamp5_30_1284\n",
            "GKAFDDGAFTGIREINLSINKETAIGD\n",
            ">nonamp5_30_1285\n",
            "APLQPGGSPALTKIYPRGSHWAVGHLM\n",
            ">nonamp5_30_1286\n",
            "NLYQFKNMIQCTTKRSVLEFMEYGCYC\n",
            ">nonamp5_30_1287\n",
            "DVPSANANANNQRTAAAKPQANAEASS\n",
            ">nonamp5_30_1288\n",
            "ADDKNPLEEAFREADYEVFLEIAKNGL\n",
            ">nonamp5_30_1289\n",
            "DVAGLVPAKDSPAFQKRAAAAVNTTAD\n",
            ">nonamp5_30_1290\n",
            "HSDGTFTSELSRLRDSARLQRLLQGLV\n",
            ">nonamp5_30_1291\n",
            "SKSSSPCFGGKLDRIGSYSGLGCNSRK\n",
            ">nonamp5_30_1292\n",
            "VYGMLFKFLAKKVAKKLISHVAKKQLQ\n",
            ">nonamp5_30_1293\n",
            "MQLFHLCLVISCSCPTVQASKLCLGWL\n",
            ">nonamp5_30_1294\n",
            "EVHNFACLGKPDPGGCAHYIYRRYYYV\n",
            ">nonamp5_30_1295\n",
            "APVPGGQGTVLDKMYPRGNHWAVGHLM\n",
            ">nonamp5_30_1296\n",
            "GFGSLFKFLGKKVLKTVAKQAAKKQME\n",
            ">nonamp5_30_1297\n",
            "HSDGTFTSELSRLRESARLQRLLQGLV\n",
            ">nonamp5_30_1298\n",
            "GFGMLFKFLAKKVAKKLVSHVAQKQLE\n",
            ">nonamp5_30_1299\n",
            "SFREQCVPGREITYECLNACAEYAVRQ\n",
            ">nonamp5_30_1300\n",
            "GLRDFNVAVRASNGKYWTRRPESGTLV\n",
            ">nonamp5_30_1301\n",
            "MAPRGFSCLLLSTSEIDLPMAPVKRRA\n",
            ">nonamp5_30_1302\n",
            "GAVGEIQILLNNIASQLNGDQKKADKV\n",
            ">nonamp5_30_1303\n",
            "MSKGYVWVVDDDSSIRWVMEKTSPLPT\n",
            ">nonamp5_30_1304\n",
            "MKRISTTITTTITTTITITITTGNGAG\n",
            ">nonamp5_30_1305\n",
            "MIKPDGVQRGLVGEIISRGDFAIDIGR\n",
            ">nonamp5_30_1306\n",
            "GYEDEDEDRPFYALGLGKRPRTYSFGL\n",
            ">nonamp5_30_1307\n",
            "VRDICKKEAERQDLSSCENYITQRRGY\n",
            ">nonamp5_30_1308\n",
            "KKMKDTDSEEEIREAFRVFDKDGNGFI\n",
            ">nonamp5_30_1309\n",
            "MHPVLRQMRPQQQAPSQQQPQKALLAP\n",
            ">nonamp5_30_1310\n",
            "DLWNSIKDMAAAAGRAALNAVTGMVNQ\n",
            ">nonamp5_30_1311\n",
            "MQLFHLCLIIFCSCPTVQASKLCLGWL\n",
            ">nonamp5_30_1312\n",
            "APVSVGGGTVLAKMYPRGNHWAVGHLM\n",
            ">nonamp5_30_1313\n",
            "GFGALFKFLAKKVAKTVAKQVAKKQME\n",
            ">nonamp5_30_1314\n",
            "HSDGLFTSEYSKMRGNAQVQKFIQNLM\n",
            ">nonamp5_30_1315\n",
            "MGKGDRRTRRGKIWRGTYGKYRPRKKK\n",
            ">nonamp5_30_1316\n",
            "FRLSPAARNILEKHSLDASQGTATGPR\n",
            ">nonamp5_30_1317\n",
            "AGETHTVMINHAGRGAPKLVVGGKKLS\n",
            ">nonamp5_30_1318\n",
            "RDWERREFERRQNELRREQEQRREELL\n",
            ">nonamp5_30_1319\n",
            "ALWMTLLKKVLKAAAKALNAVLVGANA\n",
            ">nonamp5_30_1320\n",
            "MIIGAVEAGGTKFVDGVGNEKGEIFER\n",
            ">nonamp5_30_1321\n",
            "ALPCPYGCPLRCCHMTDGVCLRNKQGC\n",
            ">nonamp5_30_1322\n",
            "MQLFHLCLIISCSCPTVQASKLCLGWL\n",
            ">nonamp5_30_1323\n",
            "EVVRSNNFDPSKLSGKWYSILLASDRKE\n",
            ">nonamp5_30_1324\n",
            "GLMDMVKGAAKNLFASALDTLKCKITGC\n",
            ">nonamp5_30_1325\n",
            "LDVELTVEERNLLSVGYKDSTLIMQLLR\n",
            ">nonamp5_30_1326\n",
            "RRRRRRRGHRGRRGRGGRRSRGRRRRAA\n",
            ">nonamp5_30_1327\n",
            "AVWKDFLKNIGKAAGKAVLNSVTDMVNE\n",
            ">nonamp5_30_1328\n",
            "RICPRIWMECKRDSDCMAQCICVDGHCG\n",
            ">nonamp5_30_1329\n",
            "TTKPVPSGSPWYGPDRVKNRELEVIHSR\n",
            ">nonamp5_30_1330\n",
            "MCICKNGKPLPGFIGKICRKICMMQQTH\n",
            ">nonamp5_30_1331\n",
            "LGEFAPTRTYRGHDKKDNKKDNKKGQKK\n",
            ">nonamp5_30_1332\n",
            "ALFSILRGLKKLGNMGQAFVNCKIYKKC\n",
            ">nonamp5_30_1333\n",
            "ASDVTLNSFAEDVTVGECCDCVDLTTVY\n",
            ">nonamp5_30_1334\n",
            "ARQLNPSDQELQSPQQLYPQQPYPQQPY\n",
            ">nonamp5_30_1335\n",
            "MAPRGFSCLLLSTSEIDLPVKRLLSSVF\n",
            ">nonamp5_30_1336\n",
            "GIMDSVKGLAKNLAGKLLDSLKCKITGC\n",
            ">nonamp5_30_1337\n",
            "MDVAEYAAHDATGLAELIREGQVSACEV\n",
            ">nonamp5_30_1338\n",
            "GSLCGDTCFVLGCNDSSCSCNYPICVKD\n",
            ">nonamp5_30_1339\n",
            "SADQPNSIPPRERKAGCKNFYWKGLTSC\n",
            ">nonamp5_30_1340\n",
            "NLQYLKNMIKCTNTRHWLSFTNYGCYCG\n",
            ">nonamp5_30_1341\n",
            "FLAKKVAKTVAKQAAKQGAKYVANKHME\n",
            ">nonamp5_30_1342\n",
            "MATQGFSCLLLSVSEIDLSMKRQYKQIR\n",
            ">nonamp5_30_1343\n",
            "MSHIVRFTGLLLLNAFIVRGRPVGGIQH\n",
            ">nonamp5_30_1344\n",
            "RQLNPSSQELQSPQQSYLQQPYPQNPYL\n",
            ">nonamp5_30_1345\n",
            "HSDAVFTDNYTRLRKQMAVKKYLNSILN\n",
            ">nonamp5_30_1346\n",
            "ALWKDLLKNVGIAAGKAVLNKVTDMVNQ\n",
            ">nonamp5_30_1347\n",
            "SLQAATEWLKANNQRGFLGEMGAGSNAD\n",
            ">nonamp5_30_1348\n",
            "WWRELLKKLAFTAAGHLGSVLAAKQSGW\n",
            ">nonamp5_30_1349\n",
            "ACEVTQLAVCASAILGGTKPSGECCGNL\n",
            ">nonamp5_30_1350\n",
            "ELISNSSDALDKTNNSLTIIDSGIGMTK\n",
            ">nonamp5_30_1351\n",
            "NLYQFKNMIKCTNTRMWWSFTNAGCYDG\n",
            ">nonamp5_30_1352\n",
            "DLARNLGLVDIDDEYDEDSDKEKPIFNV\n",
            ">nonamp5_30_1353\n",
            "FLAKKVAKTVAKQAAKQGAKYVVNKQME\n",
            ">nonamp5_30_1354\n",
            "VTVVQYRSTNASSGYLNLRVYLLDTGLR\n",
            ">nonamp5_30_1355\n",
            "NLIQLSNMIKCAIPGSRPLFQYTDYGCY\n",
            ">nonamp5_30_1356\n",
            "ALWKNMLKGIGKLAGQAALGAVKTLVGA\n",
            ">nonamp5_30_1357\n",
            "HSDAVFTDSYTRLLKQMAMRKYLDSILN\n",
            ">nonamp5_30_1358\n",
            "GLWKSLLKNVGVAAGKAALNAVTDMVNQ\n",
            ">nonamp5_30_1359\n",
            "HSDAIFTDNYSRFRKQMAVKKYLNSVLT\n",
            ">nonamp5_30_1360\n",
            "RSCPRIWMECTRDSDCMAKCICVAGHCG\n",
            ">nonamp5_30_1361\n",
            "VGCEEDPMHCKGKQAKPTCCNGVCNCNV\n",
            ">nonamp5_30_1362\n",
            "DDNGKPYVLPSVRTCGFDFTGAVEDISK\n",
            ">nonamp5_30_1363\n",
            "PNYKLTYFNLRGRAEISRYLFAYAGIKY\n",
            ">nonamp5_30_1364\n",
            "RDPTGCEVDQVIMVKRHGERYPSPSAGK\n",
            ">nonamp5_30_1365\n",
            "SLFELGKMILQETGKNPAQSYGAYGCNC\n",
            ">nonamp5_30_1366\n",
            "MIRIISRANSVTSSNEVNRLVTGQIPHD\n",
            ">nonamp5_30_1367\n",
            "EASGETFVAENDACKCGSDCKCNPCTCK\n",
            ">nonamp5_30_1368\n",
            "GLLDTIKGVAKTVAASMLDKLKCKISGC\n",
            ">nonamp5_30_1369\n",
            "MRNLQPNMSRWAFFAKSVGTWNKSSCRS\n",
            ">nonamp5_30_1370\n",
            "TRRTAFLFDELSLWHSASQYALILPVGG\n",
            ">nonamp5_30_1371\n",
            "MVEYLVILSGMFGLALACFFGLRSIKLI\n",
            ">nonamp5_30_1372\n",
            "MRVNKESLQMNTYISLHGWWRTSLLRAV\n",
            ">nonamp5_30_1373\n",
            "MSEARNLFTTFGILAILLFFLYLIYAVL\n",
            ">nonamp5_30_1374\n",
            "MDPTVGWIALLAFFVVSIALVVWGRNGF\n",
            ">nonamp5_30_1375\n",
            "MSYIVRFTGLLLLNAFIVRGRPVGGIQH\n",
            ">nonamp5_30_1376\n",
            "GLPVCGETCVGGTCNTPGCTCSWPVCTRD\n",
            ">nonamp5_30_1377\n",
            "GWTLNSAGYLLGPHAIDNHRSFNEKHGIA\n",
            ">nonamp5_30_1378\n",
            "MDILSLGWAALMAMFTFSIAMVVWGRNGF\n",
            ">nonamp5_30_1379\n",
            "NYTIGNDNVLTEPLSEIKTAGLMYKMGVQ\n",
            ">nonamp5_30_1380\n",
            "GLPTCGETCFKGKCYTPGCSCSYPICKKN\n",
            ">nonamp5_30_1381\n",
            "MTTKFVFDLLAPDDILHPSNHVNLIIRPI\n",
            ">nonamp5_30_1382\n",
            "RICPRILMECKADSDCLAQCICEESGFCG\n",
            ">nonamp5_30_1383\n",
            "MDIVNIAWAALMVVSTSSLSPVAWGRSGL\n",
            ">nonamp5_30_1384\n",
            "MDILTLGWVSVLTLFTYSIAMVVWGRHGM\n",
            ">nonamp5_30_1385\n",
            "ELIGAANRDTKSFSINRKDAKERVAKAAR\n",
            ">nonamp5_30_1386\n",
            "GLPTCGETCFKGKCYTPGCSCSYPICKKD\n",
            ">nonamp5_30_1387\n",
            "GLPICGETCFKTKCYTKGCSCSYPVCKRN\n",
            ">nonamp5_30_1388\n",
            "SGSIIHSMEANVGYSPDKSQNMVLMGGLK\n",
            ">nonamp5_30_1389\n",
            "GVPICGETCVGGTCNTPGCSCSWPVCTRN\n",
            ">nonamp5_30_1390\n",
            "MDIVSLTWAALMVVFTFSLSLVVWGRSGL\n",
            ">nonamp5_30_1391\n",
            "HSQGTFTSDYSKYLDTRRAQDFVQWLMST\n",
            ">nonamp5_30_1392\n",
            "MDIVSIAWAALMVVFSFSLSLVVWGRSGL\n",
            ">nonamp5_30_1393\n",
            "TPEHQRYIELFLVVDSGMFMKYNGNSDKI\n",
            ">nonamp5_30_1394\n",
            "GSAFCGETCVLGTCYTPDCSCTALVCLKN\n",
            ">nonamp5_30_1395\n",
            "MDIVSLAWASLMVVFTFSLSLVVWGRSGL\n",
            ">nonamp5_30_1396\n",
            "MNIVDIAWAALMVVFTFSLSLVVWGRSGL\n",
            ">nonamp5_30_1397\n",
            "GLPICGETCVGGTCNTPGCTCSWPVCTRN\n",
            ">nonamp5_30_1398\n",
            "TPNSYILQQFENPANPKLIVAIFPSFGER\n",
            ">nonamp5_30_1399\n",
            "GILDSLKNLAKNAGQILLNKASCKLSGQC\n",
            ">nonamp5_30_1400\n",
            "GLPVCGETCFGGRCNTPGCTCSYPICTRN\n",
            ">nonamp5_30_1401\n",
            "GLWSTIKQKGKEAAIAAAKAAGQAALGAL\n",
            ">nonamp5_30_1402\n",
            "DCLPGWSVYEGRCYKVFNQKTWKAAEKFC\n",
            ">nonamp5_30_1403\n",
            "GLWSKIKTAGKSVAKAAAKAAVKAVTNAV\n",
            ">nonamp5_30_1404\n",
            "MDMVSLAWAALMVVFTFSLSLVVWGRSGL\n",
            ">nonamp5_30_1405\n",
            "GLWETIKNFGKKFTLNILHKLKCKIGGGC\n",
            ">nonamp5_30_1406\n",
            "HEPCGESCVFIPCITTVVGCSCKNKVCYN\n",
            ">nonamp5_30_1407\n",
            "LENRVAEKQKLFQEDNGLPVHLKGGATDN\n",
            ">nonamp5_30_1408\n",
            "MNEAKSLFTTFLILAFLLFLLYAFYEAAF\n",
            ">nonamp5_30_1409\n",
            "GLMSTLKGAATNVAVTLLNKLQCKLTGTC\n",
            ">nonamp5_30_1410\n",
            "MDIVSIGWAALMVVFTFSLSLVVWGRSGL\n",
            ">nonamp5_30_1411\n",
            "MDIISLGWSSLLVVFTFSLSLVVWGRNGF\n",
            ">nonamp5_30_1412\n",
            "MDIVGITWAALMVVFTFSLSLVVWGRSGL\n",
            ">nonamp5_30_1413\n",
            "GICPRILMECKRDSDCLAQCVCKRQGYCG\n",
            ">nonamp5_30_1414\n",
            "MDILSISWAFLMVVFTFSLSLVVWGRSGL\n",
            ">nonamp5_30_1415\n",
            "GLWSKIKETGKEAAKAAGKAALNKIAEAV\n",
            ">nonamp5_30_1416\n",
            "MKIKFVFDLLTPDDILHPSNHVNLIIRPI\n",
            ">nonamp5_30_1417\n",
            "MMYLMPLLIVIVGCLALHCSDDDMPDGHA\n",
            ">nonamp5_30_1418\n",
            "MDILTLGWVGLLGLFTYSIAMVVWGRHGM\n",
            ">nonamp5_30_1419\n",
            "HSEGTFSSDYSKYLDSRRAKDFVQWLMST\n",
            ">nonamp5_30_1420\n",
            "HEPCGESCVFIPCITTVVGCSCKNKVCYD\n",
            ">nonamp5_30_1421\n",
            "MDILSLGWAALMTMFTFSLALTVWARNGF\n",
            ">nonamp5_30_1422\n",
            "DFKDWMKTAGEWLKKKGPGILKAAMAAAT\n",
            ">nonamp5_30_1423\n",
            "GVPICGETCTLGTCYTAGCSCSWPVCTRN\n",
            ">nonamp5_30_1424\n",
            "MDIISLGWAGVMTMFTFSLALVVWGRNGF\n",
            ">nonamp5_30_1425\n",
            "MAILTLGWVSLLVVFTWSIAMVVWGRNGL\n",
            ">nonamp5_30_1426\n",
            "GRKKGVQFDEGAPDDFDPNNPYKKDVAFL\n",
            ">nonamp5_30_1427\n",
            "SCSSGCSDCNSDSCQCTLNQFTNSDSCCC\n",
            ">nonamp5_30_1428\n",
            "GLWSKIKEAGKAAVKAAGKAALGAVADSV\n",
            ">nonamp5_30_1429\n",
            "GLPICGETCFTGTCYTPGCTCSYPVCKKN\n",
            ">nonamp5_30_1430\n",
            "EDFDSQCVPTADPGPCKAYIPMWWYNVLS\n",
            ">nonamp5_30_1431\n",
            "FENKVPEKQKLFQEDNGIPVVLKGGVADA\n",
            ">nonamp5_30_1432\n",
            "GLPTCGETCTLGKCNTPKCTCNWPICYKN\n",
            ">nonamp5_30_1433\n",
            "MDLLSLGWSSLMVMFSFSLALVVWGRNGF\n",
            ">nonamp5_30_1434\n",
            "HSQGTFTSDYSKHLDSRYAQEFVQWLMNT\n",
            ">nonamp5_30_1435\n",
            "VSCEDCPDHCSTQKARAKCDNDKCVCEPI\n",
            ">nonamp5_30_1436\n",
            "MEIDVLGWVALLVVFTWSIAMVVWGRNGL\n",
            ">nonamp5_30_1437\n",
            "SVALQVTVDAVSGSAKEKITAAGTVTELV\n",
            ">nonamp5_30_1438\n",
            "GLWKSLLKNVGKAAGKAALNAVTDMVNQA\n",
            ">nonamp5_30_1439\n",
            "MDIVSLAWAALMIVFTFSLSLVVWGRSGL\n",
            ">nonamp5_30_1440\n",
            "HSEGTFSNDYSKYLETRRAQDFVQWLKNS\n",
            ">nonamp5_30_1441\n",
            "GLPCGETCFTGKCYTPGCSCSYPICKKIN\n",
            ">nonamp5_30_1442\n",
            "MDIVNIAWAALMVVSTFSLTLVVWGRSGL\n",
            ">nonamp5_30_1443\n",
            "KFLSGGFKEIVCHRYCAKGIAKEFCNCPD\n",
            ">nonamp5_30_1444\n",
            "MDIVSLAWAALMVVFTFSLSLVVWGRSGL\n",
            ">nonamp5_30_1445\n",
            "MDIISLGWAGLMTMFTFSLALVVWARNGF\n",
            ">nonamp5_30_1446\n",
            "TALPQLRLPATSRILCAGVLEGGIDTCNR\n",
            ">nonamp5_30_1447\n",
            "MEILTLGWVSLLVVFTWSIAMVVWGRNGL\n",
            ">nonamp5_30_1448\n",
            "MDILSLGWSALMVVFTFSLALVVWGRNGF\n",
            ">nonamp5_30_1449\n",
            "RVCPRILMECKKDSDCLAECVCLEHGYCG\n",
            ">nonamp5_30_1450\n",
            "GLPVCGETCVTGSCYTPGCTCSWPVCTRN\n",
            ">nonamp5_30_1451\n",
            "GADVAHKQQSVNHLLYLVTSHYPSLDYSLL\n",
            ">nonamp5_30_1452\n",
            "GIPCGESCVFIPCITSVAGCSCKSKVCYRN\n",
            ">nonamp5_30_1453\n",
            "GSAIRCGESCLLGKCYTPGCTCDRPICKKN\n",
            ">nonamp5_30_1454\n",
            "NVDFNSESTRRKKKQNEIVDLHNSLRRTVN\n",
            ">nonamp5_30_1455\n",
            "DCPSDWSPYEGHCYRVFTEPQNWADAEKFC\n",
            ">nonamp5_30_1456\n",
            "MWYLLWFVGILLMCSLSTLVLVWLDPRLKS\n",
            ">nonamp5_30_1457\n",
            "QDYCAQEGQQEVQRKDLSDLERYLRQSRQR\n",
            ">nonamp5_30_1458\n",
            "HAEGTYTSDVSSYLQDQAAKEFVSWLKTGR\n",
            ">nonamp5_30_1459\n",
            "GVIPCGESCVFIPCINKKKCSCKNKVCYRD\n",
            ">nonamp5_30_1460\n",
            "AKLDETLTMLKALTDAKGVPGNEREARDVM\n",
            ">nonamp5_30_1461\n",
            "DCPSDWSPYEGHCYKHFIKWMNNEDAERFC\n",
            ">nonamp5_30_1462\n",
            "AYGEGANVFGKRKETDQFFEISGDGWSGKL\n",
            ">nonamp5_30_1463\n",
            "ILQKAVLDCLKAAGSSLSKAAITAIYNKIT\n",
            ">nonamp5_30_1464\n",
            "GIPCGESCVFIPCISTVIGCSCKNKVCYRN\n",
            ">nonamp5_30_1465\n",
            "MIDDSQIFVALLFALVSAVLAIRLGKELYQ\n",
            ">nonamp5_30_1466\n",
            "GKITFYEDRNFQGRCYECSTDCPDLSPYFS\n",
            ">nonamp5_30_1467\n",
            "KAWFVLSMRAVGGLFVDLWTSVAKTVKGWL\n",
            ">nonamp5_30_1468\n",
            "NLYQFKNMIHCTVPSRPWWHFADYGCYCGR\n",
            ">nonamp5_30_1469\n",
            "GIPCAESCVYIPCTVTALLGCSCSNRVCYN\n",
            ">nonamp5_30_1470\n",
            "MDPAGPDNDERFTYDYYRLRVVGLIVAAVL\n",
            ">nonamp5_30_1471\n",
            "MPIIGVPRCLENPFCAPAKFPLSVKKKIRI\n",
            ">nonamp5_30_1472\n",
            "DCLPGWSSHEGHCYKVFNQEMYWADAEKFC\n",
            ">nonamp5_30_1473\n",
            "GSAIACGESCFKFKCYTPGCSCSYPICKKD\n",
            ">nonamp5_30_1474\n",
            "APLEDEDDLELLEKVKRDRKKRLERQGAIN\n",
            ">nonamp5_30_1475\n",
            "EDDHDHHHHHHHHHHHHGVGGGGGGGGGGA\n",
            ">nonamp5_30_1476\n",
            "GIPCAESCVYIPCTITALLGCKCQDKVCYD\n",
            ">nonamp5_30_1477\n",
            "ADDRNPLEECFRETDYEEFLEIARNGLKKT\n",
            ">nonamp5_30_1478\n",
            "GIPCAESCVYIPCTITALLGCKCKDQVCYN\n",
            ">nonamp5_30_1479\n",
            "MISDSQIFVALLFALVSAVLAIRLGTDLYQ\n",
            ">nonamp5_30_1480\n",
            "GCPRILMRCKQDSDCLAGCVCGPNGFCGSP\n",
            ">nonamp5_30_1481\n",
            "GIPCGESCVWIPCISAALGCSCKNKVCYRN\n",
            ">nonamp5_30_1482\n",
            "GLPCGESCVFIPCITTVVGCSCKNKVCYND\n",
            ">nonamp5_30_1483\n",
            "GIPCGESCVWIPCISSAIGCSCKNKVCYRN\n",
            ">nonamp5_30_1484\n",
            "ASEALVEIKPGEIGMVSGIPDEHLRRFVVI\n",
            ">nonamp5_30_1485\n",
            "KIPCGESCVWIPCLTSVFNCKCENKVCYHD\n",
            ">nonamp5_30_1486\n",
            "GLPVCGETCFGGTCNTPGCICDPWPVCTRN\n",
            ">nonamp5_30_1487\n",
            "GWKDWAKKAGGWLKKKGPGMAKAALKAAMQ\n",
            ">nonamp5_30_1488\n",
            "ALWKNMLKGIGKLAGQAALGAVKTLVGAES\n",
            ">nonamp5_30_1489\n",
            "GRADYNFGYGLGRGTRKFFNGIGRWVRKTF\n",
            ">nonamp5_30_1490\n",
            "GIPCAESCVWIPCTVTALLGCSCSNKVCYN\n",
            ">nonamp5_30_1491\n",
            "MKTISRQAYADMFGPTTGDRLRLADTELFL\n",
            ">nonamp5_30_1492\n",
            "GLKDWVKIAGGWLKKKGPGILKAAMAAATQ\n",
            ">nonamp5_30_1493\n",
            "GSVIGCGETCLRGRCYTPGCTCDHGICKKN\n",
            ">nonamp5_30_1494\n",
            "GIPCGESCVWIPCISSAIGCSCKSKVCYRN\n",
            ">nonamp5_30_1495\n",
            "GIPCGESCVWIPCISAAIGCSCKNKVCYRN\n",
            ">nonamp5_30_1496\n",
            "VIGGDECNINEHRFLVALYDPDGFLSGGIL\n",
            ">nonamp5_30_1497\n",
            "ADLIQRRQRSEFQSDIKGILYTVIKKNPDL\n",
            ">nonamp5_30_1498\n",
            "GIPCAESCVYIPCTITALLGCSCKNKVCYN\n",
            ">nonamp5_30_1499\n",
            "GLPVCGESCFGGTCNTPGCACDPWPVCTRD\n",
            ">nonamp5_30_1500\n",
            "MITDSQVFIGLVIALVPAILAFKLGLSLYE\n",
            ">nonamp5_30_1501\n",
            "MTDAQVFTILAIALVPAVMAALLGSALARS\n",
            ">nonamp5_30_1502\n",
            "GTPCGESCVWIPCISSAVGCSCKNKVCYKN\n",
            ">nonamp5_30_1503\n",
            "GFPCGESCVFIPCISAAIGCSCKNKVCYRN\n",
            ">nonamp5_30_1504\n",
            "QRRCPRIYMECKHDSDCLADCVCLEHGICG\n",
            ">nonamp5_30_1505\n",
            "AEVPMPLRQLTMTLPDGREESVMERTTLVA\n",
            ">nonamp5_30_1506\n",
            "AKSILLGEEGRHSMQAGVDKLANTVKVTLG\n",
            ">nonamp5_30_1507\n",
            "DSAAGAVRAGDDETLLKPVLNSLDNLVSGL\n",
            ">nonamp5_30_1508\n",
            "SGSGVRSAKKGGKAQGGQAGVGYKGSTEPG\n",
            ">nonamp5_30_1509\n",
            "GIPCGESCVWIPCLTSAIGCSCKSKVCYRN\n",
            ">nonamp5_30_1510\n",
            "FVYGNGVTSILVQAQFLVNGQRRFFYTPDK\n",
            ">nonamp5_30_1511\n",
            "MISDIQIMVALFAALFTGILALRLGTELYK\n",
            ">nonamp5_30_1512\n",
            "DCLPDWFHYEGHCYRVFDEPKKWADAEKFC\n",
            ">nonamp5_30_1513\n",
            "GDDVKSACCDTCLCTKSNPPICRCVDIRET\n",
            ">nonamp5_30_1514\n",
            "TQACRINSGNVPSELDLRSLRTVTPIRMQG\n",
            ">nonamp5_30_1515\n",
            "MNPNCARCGKIVYPTEKVNCLDKFWHKACF\n",
            ">nonamp5_30_1516\n",
            "MLRYLSLFAVGLATGYAWGWIDGLAASLTV\n",
            ">nonamp5_30_1517\n",
            "GVPVCGETCFGGTCNTPGCSCDPWPVCSRN\n",
            ">nonamp5_30_1518\n",
            "GIPCGESCVYIPCLTSAVGCSCKSKVCYRN\n",
            ">nonamp5_30_1519\n",
            "KIPCGESCVWIPCVTSIFNCKCENKVCYHD\n",
            ">nonamp5_30_1520\n",
            "GLPCGESCVFIPCITTVVGCSCKNKVCYNN\n",
            ">nonamp5_30_1521\n",
            "MVKAVTVLNSSEGPHGIVYFAQEGDGPTTV\n",
            ">nonamp5_30_1522\n",
            "GLAGAISSVLDKLKQSQLIKNYAKKLGYPR\n",
            ">nonamp5_30_1523\n",
            "GRRCPRIYMECKRDADCLADCVCLQHGICG\n",
            ">nonamp5_30_1524\n",
            "MIYDSQIYTVLCIALLAGILAIRLGSTLYE\n",
            ">nonamp5_30_1525\n",
            "GWKDWLNKGKEWLKKKGPGIMKAALKAATQ\n",
            ">nonamp5_30_1526\n",
            "GLFKTLIKGAGKMLGHVAKQFLGSQGQPES\n",
            ">nonamp5_30_1527\n",
            "GIPCGESCVYIPCTVTALAGCKCKSKVCYN\n",
            ">nonamp5_30_1528\n",
            "SFSVNPAVDILQHRYMEKVAQNNRNFLNRV\n",
            ">nonamp5_30_1529\n",
            "MMCPRILMKCKHDSDCLPGCVCLEHIEYCG\n"
          ],
          "name": "stdout"
        }
      ]
    },
    {
      "cell_type": "markdown",
      "metadata": {
        "id": "Djpac1bjQvRp"
      },
      "source": [
        "# **Remove redundant sequences using CD-HIT**"
      ]
    },
    {
      "cell_type": "code",
      "metadata": {
        "id": "Y5fRRDbNQ0Ov",
        "colab": {
          "base_uri": "https://localhost:8080/"
        },
        "outputId": "0c3c2dd4-2673-4f4c-b0bb-e79bd93b6f91"
      },
      "source": [
        "! cd-hit -i train_po.fasta -o train_po_cdhit.txt -c 0.99"
      ],
      "execution_count": null,
      "outputs": [
        {
          "output_type": "stream",
          "text": [
            "================================================================\n",
            "Program: CD-HIT, V4.8.1, Mar 01 2019, 14:14:47\n",
            "Command: cd-hit -i train_po.fasta -o train_po_cdhit.txt -c\n",
            "         0.99\n",
            "\n",
            "Started: Fri Feb 12 17:02:34 2021\n",
            "================================================================\n",
            "                            Output                              \n",
            "----------------------------------------------------------------\n",
            "total seq: 1445\n",
            "longest and shortest : 30 and 11\n",
            "Total letters: 30071\n",
            "Sequences have been sorted\n",
            "\n",
            "Approximated minimal memory consumption:\n",
            "Sequence        : 0M\n",
            "Buffer          : 1 X 10M = 10M\n",
            "Table           : 1 X 65M = 65M\n",
            "Miscellaneous   : 0M\n",
            "Total           : 76M\n",
            "\n",
            "Table limit with the given memory limit:\n",
            "Max number of representatives: 4000000\n",
            "Max number of word counting entries: 90485873\n",
            "\n",
            "\rcomparing sequences from          0  to       1445\n",
            ".\n",
            "     1445  finished       1337  clusters\n",
            "\n",
            "Approximated maximum memory consumption: 76M\n",
            "writing new database\n",
            "writing clustering information\n",
            "program completed !\n",
            "\n",
            "Total CPU time 0.08\n"
          ],
          "name": "stdout"
        }
      ]
    },
    {
      "cell_type": "code",
      "metadata": {
        "colab": {
          "base_uri": "https://localhost:8080/"
        },
        "id": "vh-yduYRFJhX",
        "outputId": "1bd504e4-bcf2-4f23-b25d-2a6a84d3c8dc"
      },
      "source": [
        "! cd-hit -i train_ne.fasta -o train_ne_cdhit.txt -c 0.99"
      ],
      "execution_count": null,
      "outputs": [
        {
          "output_type": "stream",
          "text": [
            "================================================================\n",
            "Program: CD-HIT, V4.8.1, Mar 01 2019, 14:14:47\n",
            "Command: cd-hit -i train_ne.fasta -o train_ne_cdhit.txt -c\n",
            "         0.99\n",
            "\n",
            "Started: Fri Feb 12 17:02:35 2021\n",
            "================================================================\n",
            "                            Output                              \n",
            "----------------------------------------------------------------\n",
            "total seq: 1445\n",
            "longest and shortest : 30 and 11\n",
            "Total letters: 30071\n",
            "Sequences have been sorted\n",
            "\n",
            "Approximated minimal memory consumption:\n",
            "Sequence        : 0M\n",
            "Buffer          : 1 X 10M = 10M\n",
            "Table           : 1 X 65M = 65M\n",
            "Miscellaneous   : 0M\n",
            "Total           : 76M\n",
            "\n",
            "Table limit with the given memory limit:\n",
            "Max number of representatives: 4000000\n",
            "Max number of word counting entries: 90485331\n",
            "\n",
            "\rcomparing sequences from          0  to       1445\n",
            ".\n",
            "     1445  finished       1422  clusters\n",
            "\n",
            "Approximated maximum memory consumption: 76M\n",
            "writing new database\n",
            "writing clustering information\n",
            "program completed !\n",
            "\n",
            "Total CPU time 0.07\n"
          ],
          "name": "stdout"
        }
      ]
    },
    {
      "cell_type": "code",
      "metadata": {
        "id": "tWnEDNohYpF1",
        "colab": {
          "base_uri": "https://localhost:8080/"
        },
        "outputId": "8c870e99-ed0c-4357-d735-ce6465cd6fb3"
      },
      "source": [
        "! ls -l"
      ],
      "execution_count": null,
      "outputs": [
        {
          "output_type": "stream",
          "text": [
            "total 1012\n",
            "drwxr-xr-x 3 root root   4096 Oct 23  2019 build\n",
            "-rw-r--r-- 1 root root  86079 Sep 29 07:38 Functions_Tables.pdf\n",
            "-rw-r--r-- 1 root root    326 Feb 12 16:57 model_report.txt\n",
            "drwxr-xr-x 3 root root   4096 Feb 12 17:02 Pfeature\n",
            "-rw-r--r-- 1 root root 221146 Sep 29 07:39 Pfeature_Descriptors.pdf\n",
            "-rw-r--r-- 1 root root    971 Sep 28 10:26 PKG-INFO\n",
            "-rw-r--r-- 1 root root   1265 Sep 29 05:15 README\n",
            "-rw-r--r-- 1 root root   1267 Sep 29 04:15 setup.py\n",
            "-rw-r--r-- 1 root root 130978 Feb 12 16:38 train_ne_cdhit.aac.csv\n",
            "-rw-r--r-- 1 root root  54341 Feb 12 17:02 train_ne_cdhit.txt\n",
            "-rw-r--r-- 1 root root  61425 Feb 12 17:02 train_ne_cdhit.txt.clstr\n",
            "-rw-r--r-- 1 root root  57206 Feb 12 16:07 train_ne.fasta\n",
            "-rw-r--r-- 1 root root  57206 Feb 12 17:02 train_ne.fasta.1\n",
            "-rw-r--r-- 1 root root 122465 Feb 12 16:38 train_po_cdhit.aac.csv\n",
            "-rw-r--r-- 1 root root  47229 Feb 12 17:02 train_po_cdhit.txt\n",
            "-rw-r--r-- 1 root root  56665 Feb 12 17:02 train_po_cdhit.txt.clstr\n",
            "-rw-r--r-- 1 root root  52619 Feb 12 16:07 train_po.fasta\n",
            "-rw-r--r-- 1 root root  52619 Feb 12 17:02 train_po.fasta.1\n"
          ],
          "name": "stdout"
        }
      ]
    },
    {
      "cell_type": "code",
      "metadata": {
        "id": "CvjECuCMeUs7",
        "colab": {
          "base_uri": "https://localhost:8080/"
        },
        "outputId": "ee919d61-d349-456a-d8c7-f65a642f0530"
      },
      "source": [
        "! grep \">\" train_po_cdhit.txt | wc -l"
      ],
      "execution_count": null,
      "outputs": [
        {
          "output_type": "stream",
          "text": [
            "1337\n"
          ],
          "name": "stdout"
        }
      ]
    },
    {
      "cell_type": "code",
      "metadata": {
        "colab": {
          "base_uri": "https://localhost:8080/"
        },
        "id": "eepRGc0sEcpQ",
        "outputId": "6acd4d9b-a3f1-493e-8242-fdd48119de3b"
      },
      "source": [
        "! grep \">\" train_po.fasta | wc -l"
      ],
      "execution_count": null,
      "outputs": [
        {
          "output_type": "stream",
          "text": [
            "1529\n"
          ],
          "name": "stdout"
        }
      ]
    },
    {
      "cell_type": "code",
      "metadata": {
        "id": "jLqHmYNeGLHM",
        "colab": {
          "base_uri": "https://localhost:8080/"
        },
        "outputId": "acf43e02-f607-4d84-8590-29281d17df34"
      },
      "source": [
        "! grep \">\" train_ne.fasta | wc -l"
      ],
      "execution_count": null,
      "outputs": [
        {
          "output_type": "stream",
          "text": [
            "1529\n"
          ],
          "name": "stdout"
        }
      ]
    },
    {
      "cell_type": "code",
      "metadata": {
        "colab": {
          "base_uri": "https://localhost:8080/"
        },
        "id": "A9iPIi9cFRxW",
        "outputId": "2909d58d-b7ea-438a-e8e0-fad9953b15f5"
      },
      "source": [
        "! grep \">\" train_ne_cdhit.txt | wc -l"
      ],
      "execution_count": null,
      "outputs": [
        {
          "output_type": "stream",
          "text": [
            "1422\n"
          ],
          "name": "stdout"
        }
      ]
    },
    {
      "cell_type": "markdown",
      "metadata": {
        "id": "BQHwqXaV5eTe"
      },
      "source": [
        "# **Calculate features using the Pfeature library**\n",
        "\n",
        "Feature classes provided by Pfeature is summarized in the tables below.\n",
        "\n",
        "**Composition Based Features**\n",
        "\n",
        "Feature claass | Description | Function\n",
        "---|---|---\n",
        "AAC | Amino acid composition | aac_wp\n",
        "DPC | Dipeptide composition | dpc_wp\n",
        "TPC | Tripeptide composition | tpc_wp\n",
        "ABC | Atom and bond composition | atc_wp, btc_wp\n",
        "PCP | Physico-chemical properties | pcp_wp\n",
        "AAI | Amino acid index composition | aai_wp\n",
        "RRI | Repetitive Residue Information | rri_wp\n",
        "DDR | Distance distribution of residues |ddr_wp\n",
        "PRI | Physico-chemical properties repeat composition | pri_wp\n",
        "SEP | Shannon entropy | sep_wp\n",
        "SER | Shannon entropy of residue level | ser_wp\n",
        "SPC | Shannon entropy of physicochemical property | spc_wp\n",
        "ACR | Autocorrelation | acr_wp\n",
        "CTC | Conjoint Triad Calculation | ctc_wp\n",
        "CTD | Composition enhanced transition distribution | ctd_wp\n",
        "PAAC | Pseudo amino acid composition | paac_wp\n",
        "APAAC | Amphiphilic pseudo amino acid composition | apaac_wp\n",
        "QSO | Quasi sequence order | qos_wp\n",
        "SOC | Sequence order coupling | soc_wp\n",
        "\n",
        "[Pfeature Manual](https://webs.iiitd.edu.in/raghava/pfeature/Pfeature_Manual.pdf)"
      ]
    },
    {
      "cell_type": "markdown",
      "metadata": {
        "id": "2uMB1M0-tJNx"
      },
      "source": [
        "### **Define functions for calculating the different features**"
      ]
    },
    {
      "cell_type": "code",
      "metadata": {
        "id": "upc65MklPhS7"
      },
      "source": [
        "import pandas as pd"
      ],
      "execution_count": null,
      "outputs": []
    },
    {
      "cell_type": "code",
      "metadata": {
        "colab": {
          "base_uri": "https://localhost:8080/",
          "height": 419
        },
        "id": "fKGeLJAmbaWV",
        "outputId": "4e77f25c-60e8-435d-cb94-3520ba7a4a14"
      },
      "source": [
        "# Amino acid composition (AAC)\n",
        "\n",
        "from Pfeature.pfeature import aac_wp\n",
        "\n",
        "def aac(input):\n",
        "  a = input.rstrip('txt')\n",
        "  output = a + 'aac.csv'\n",
        "  df_out = aac_wp(input, output)\n",
        "  df_in = pd.read_csv(output)\n",
        "  return df_in\n",
        "\n",
        "aac('train_po_cdhit.txt')"
      ],
      "execution_count": null,
      "outputs": [
        {
          "output_type": "execute_result",
          "data": {
            "text/html": [
              "<div>\n",
              "<style scoped>\n",
              "    .dataframe tbody tr th:only-of-type {\n",
              "        vertical-align: middle;\n",
              "    }\n",
              "\n",
              "    .dataframe tbody tr th {\n",
              "        vertical-align: top;\n",
              "    }\n",
              "\n",
              "    .dataframe thead th {\n",
              "        text-align: right;\n",
              "    }\n",
              "</style>\n",
              "<table border=\"1\" class=\"dataframe\">\n",
              "  <thead>\n",
              "    <tr style=\"text-align: right;\">\n",
              "      <th></th>\n",
              "      <th>AAC_A</th>\n",
              "      <th>AAC_C</th>\n",
              "      <th>AAC_D</th>\n",
              "      <th>AAC_E</th>\n",
              "      <th>AAC_F</th>\n",
              "      <th>AAC_G</th>\n",
              "      <th>AAC_H</th>\n",
              "      <th>AAC_I</th>\n",
              "      <th>AAC_K</th>\n",
              "      <th>AAC_L</th>\n",
              "      <th>AAC_M</th>\n",
              "      <th>AAC_N</th>\n",
              "      <th>AAC_P</th>\n",
              "      <th>AAC_Q</th>\n",
              "      <th>AAC_R</th>\n",
              "      <th>AAC_S</th>\n",
              "      <th>AAC_T</th>\n",
              "      <th>AAC_V</th>\n",
              "      <th>AAC_W</th>\n",
              "      <th>AAC_Y</th>\n",
              "    </tr>\n",
              "  </thead>\n",
              "  <tbody>\n",
              "    <tr>\n",
              "      <th>0</th>\n",
              "      <td>27.27</td>\n",
              "      <td>0.00</td>\n",
              "      <td>9.09</td>\n",
              "      <td>0.00</td>\n",
              "      <td>9.09</td>\n",
              "      <td>9.09</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>9.09</td>\n",
              "      <td>9.09</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>18.18</td>\n",
              "      <td>0.00</td>\n",
              "      <td>9.09</td>\n",
              "    </tr>\n",
              "    <tr>\n",
              "      <th>1</th>\n",
              "      <td>0.00</td>\n",
              "      <td>54.55</td>\n",
              "      <td>0.00</td>\n",
              "      <td>9.09</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>18.18</td>\n",
              "      <td>18.18</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "    </tr>\n",
              "    <tr>\n",
              "      <th>2</th>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>9.09</td>\n",
              "      <td>18.18</td>\n",
              "      <td>9.09</td>\n",
              "      <td>9.09</td>\n",
              "      <td>9.09</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>9.09</td>\n",
              "      <td>9.09</td>\n",
              "      <td>0.00</td>\n",
              "      <td>18.18</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>9.09</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "    </tr>\n",
              "    <tr>\n",
              "      <th>3</th>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>18.18</td>\n",
              "      <td>9.09</td>\n",
              "      <td>9.09</td>\n",
              "      <td>9.09</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>9.09</td>\n",
              "      <td>9.09</td>\n",
              "      <td>9.09</td>\n",
              "      <td>18.18</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>9.09</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "    </tr>\n",
              "    <tr>\n",
              "      <th>4</th>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>9.09</td>\n",
              "      <td>18.18</td>\n",
              "      <td>18.18</td>\n",
              "      <td>9.09</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>9.09</td>\n",
              "      <td>9.09</td>\n",
              "      <td>9.09</td>\n",
              "      <td>18.18</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "    </tr>\n",
              "    <tr>\n",
              "      <th>...</th>\n",
              "      <td>...</td>\n",
              "      <td>...</td>\n",
              "      <td>...</td>\n",
              "      <td>...</td>\n",
              "      <td>...</td>\n",
              "      <td>...</td>\n",
              "      <td>...</td>\n",
              "      <td>...</td>\n",
              "      <td>...</td>\n",
              "      <td>...</td>\n",
              "      <td>...</td>\n",
              "      <td>...</td>\n",
              "      <td>...</td>\n",
              "      <td>...</td>\n",
              "      <td>...</td>\n",
              "      <td>...</td>\n",
              "      <td>...</td>\n",
              "      <td>...</td>\n",
              "      <td>...</td>\n",
              "      <td>...</td>\n",
              "    </tr>\n",
              "    <tr>\n",
              "      <th>1332</th>\n",
              "      <td>10.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>3.33</td>\n",
              "      <td>3.33</td>\n",
              "      <td>6.67</td>\n",
              "      <td>20.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>3.33</td>\n",
              "      <td>13.33</td>\n",
              "      <td>13.33</td>\n",
              "      <td>3.33</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>3.33</td>\n",
              "      <td>0.00</td>\n",
              "      <td>6.67</td>\n",
              "      <td>3.33</td>\n",
              "      <td>10.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "    </tr>\n",
              "    <tr>\n",
              "      <th>1333</th>\n",
              "      <td>6.67</td>\n",
              "      <td>3.33</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>3.33</td>\n",
              "      <td>20.00</td>\n",
              "      <td>6.67</td>\n",
              "      <td>3.33</td>\n",
              "      <td>3.33</td>\n",
              "      <td>6.67</td>\n",
              "      <td>0.00</td>\n",
              "      <td>6.67</td>\n",
              "      <td>0.00</td>\n",
              "      <td>3.33</td>\n",
              "      <td>6.67</td>\n",
              "      <td>10.00</td>\n",
              "      <td>3.33</td>\n",
              "      <td>13.33</td>\n",
              "      <td>3.33</td>\n",
              "      <td>0.00</td>\n",
              "    </tr>\n",
              "    <tr>\n",
              "      <th>1334</th>\n",
              "      <td>13.33</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>3.33</td>\n",
              "      <td>0.00</td>\n",
              "      <td>3.33</td>\n",
              "      <td>13.33</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>10.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>16.67</td>\n",
              "      <td>6.67</td>\n",
              "      <td>16.67</td>\n",
              "      <td>6.67</td>\n",
              "      <td>3.33</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>6.67</td>\n",
              "    </tr>\n",
              "    <tr>\n",
              "      <th>1335</th>\n",
              "      <td>6.67</td>\n",
              "      <td>0.00</td>\n",
              "      <td>6.67</td>\n",
              "      <td>6.67</td>\n",
              "      <td>0.00</td>\n",
              "      <td>6.67</td>\n",
              "      <td>3.33</td>\n",
              "      <td>6.67</td>\n",
              "      <td>6.67</td>\n",
              "      <td>26.67</td>\n",
              "      <td>0.00</td>\n",
              "      <td>3.33</td>\n",
              "      <td>0.00</td>\n",
              "      <td>10.00</td>\n",
              "      <td>10.00</td>\n",
              "      <td>3.33</td>\n",
              "      <td>3.33</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "    </tr>\n",
              "    <tr>\n",
              "      <th>1336</th>\n",
              "      <td>0.00</td>\n",
              "      <td>20.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>3.33</td>\n",
              "      <td>3.33</td>\n",
              "      <td>23.33</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>6.67</td>\n",
              "      <td>0.00</td>\n",
              "      <td>3.33</td>\n",
              "      <td>0.00</td>\n",
              "      <td>6.67</td>\n",
              "      <td>3.33</td>\n",
              "      <td>10.00</td>\n",
              "      <td>6.67</td>\n",
              "      <td>0.00</td>\n",
              "      <td>6.67</td>\n",
              "      <td>0.00</td>\n",
              "      <td>6.67</td>\n",
              "    </tr>\n",
              "  </tbody>\n",
              "</table>\n",
              "<p>1337 rows × 20 columns</p>\n",
              "</div>"
            ],
            "text/plain": [
              "      AAC_A  AAC_C  AAC_D  AAC_E  AAC_F  ...  AAC_S  AAC_T  AAC_V  AAC_W  AAC_Y\n",
              "0     27.27   0.00   9.09   0.00   9.09  ...   0.00   0.00  18.18   0.00   9.09\n",
              "1      0.00  54.55   0.00   9.09   0.00  ...  18.18  18.18   0.00   0.00   0.00\n",
              "2      0.00   0.00   9.09  18.18   9.09  ...   0.00   0.00   9.09   0.00   0.00\n",
              "3      0.00   0.00   0.00  18.18   9.09  ...   0.00   0.00   9.09   0.00   0.00\n",
              "4      0.00   0.00   9.09  18.18  18.18  ...   0.00   0.00   0.00   0.00   0.00\n",
              "...     ...    ...    ...    ...    ...  ...    ...    ...    ...    ...    ...\n",
              "1332  10.00   0.00   3.33   3.33   6.67  ...   6.67   3.33  10.00   0.00   0.00\n",
              "1333   6.67   3.33   0.00   0.00   3.33  ...  10.00   3.33  13.33   3.33   0.00\n",
              "1334  13.33   0.00   0.00   3.33   0.00  ...   6.67   3.33   0.00   0.00   6.67\n",
              "1335   6.67   0.00   6.67   6.67   0.00  ...   3.33   3.33   0.00   0.00   0.00\n",
              "1336   0.00  20.00   0.00   3.33   3.33  ...   6.67   0.00   6.67   0.00   6.67\n",
              "\n",
              "[1337 rows x 20 columns]"
            ]
          },
          "metadata": {
            "tags": []
          },
          "execution_count": 18
        }
      ]
    },
    {
      "cell_type": "code",
      "metadata": {
        "colab": {
          "base_uri": "https://localhost:8080/",
          "height": 358
        },
        "id": "4TRL0i6vSooe",
        "outputId": "aade7b78-c276-4ddd-b1e3-706b59944cae"
      },
      "source": [
        "# Dipeptide composition (DPC)\n",
        "\n",
        "from Pfeature.pfeature import dpc_wp\n",
        "\n",
        "def dpc(input):\n",
        "  a = input.rstrip('txt')\n",
        "  output = a + 'dpc.csv'\n",
        "  df_out = dpc_wp(input, output, 1)\n",
        "  df_in = pd.read_csv(output)\n",
        "  return df_in\n",
        "\n",
        "feature = dpc('train_po_cdhit.txt')\n",
        "feature"
      ],
      "execution_count": null,
      "outputs": [
        {
          "output_type": "error",
          "ename": "KeyboardInterrupt",
          "evalue": "ignored",
          "traceback": [
            "\u001b[0;31m---------------------------------------------------------------------------\u001b[0m",
            "\u001b[0;31mKeyboardInterrupt\u001b[0m                         Traceback (most recent call last)",
            "\u001b[0;32m<ipython-input-19-cb1f2383e617>\u001b[0m in \u001b[0;36m<module>\u001b[0;34m()\u001b[0m\n\u001b[1;32m     10\u001b[0m   \u001b[0;32mreturn\u001b[0m \u001b[0mdf_in\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m     11\u001b[0m \u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0;32m---> 12\u001b[0;31m \u001b[0mfeature\u001b[0m \u001b[0;34m=\u001b[0m \u001b[0mdpc\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0;34m'train_po_cdhit.txt'\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m     13\u001b[0m \u001b[0mfeature\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n",
            "\u001b[0;32m<ipython-input-19-cb1f2383e617>\u001b[0m in \u001b[0;36mdpc\u001b[0;34m(input)\u001b[0m\n\u001b[1;32m      6\u001b[0m   \u001b[0ma\u001b[0m \u001b[0;34m=\u001b[0m \u001b[0minput\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mrstrip\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0;34m'txt'\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m      7\u001b[0m   \u001b[0moutput\u001b[0m \u001b[0;34m=\u001b[0m \u001b[0ma\u001b[0m \u001b[0;34m+\u001b[0m \u001b[0;34m'dpc.csv'\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0;32m----> 8\u001b[0;31m   \u001b[0mdf_out\u001b[0m \u001b[0;34m=\u001b[0m \u001b[0mdpc_wp\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0minput\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0moutput\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0;36m1\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m      9\u001b[0m   \u001b[0mdf_in\u001b[0m \u001b[0;34m=\u001b[0m \u001b[0mpd\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mread_csv\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0moutput\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m     10\u001b[0m   \u001b[0;32mreturn\u001b[0m \u001b[0mdf_in\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n",
            "\u001b[0;32m/content/Pfeature/Pfeature/pfeature.py\u001b[0m in \u001b[0;36mdpc_wp\u001b[0;34m(seq, result_filename, lg)\u001b[0m\n\u001b[1;32m    154\u001b[0m \u001b[0;32mdef\u001b[0m \u001b[0mdpc_wp\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mseq\u001b[0m\u001b[0;34m,\u001b[0m\u001b[0mresult_filename\u001b[0m\u001b[0;34m,\u001b[0m\u001b[0mlg\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m:\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m    155\u001b[0m     \u001b[0mreadseq\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mseq\u001b[0m\u001b[0;34m,\u001b[0m\u001b[0;34m'input_sam.csv'\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0;32m--> 156\u001b[0;31m     \u001b[0mdpc_comp\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0;34m'input_sam.csv'\u001b[0m\u001b[0;34m,\u001b[0m\u001b[0mlg\u001b[0m\u001b[0;34m,\u001b[0m\u001b[0;34m'tempfile_out'\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m    157\u001b[0m     \u001b[0mdf\u001b[0m \u001b[0;34m=\u001b[0m \u001b[0mpd\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mread_csv\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0;34m'tempfile_out'\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m    158\u001b[0m     \u001b[0mdf\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0miloc\u001b[0m\u001b[0;34m[\u001b[0m\u001b[0;34m:\u001b[0m\u001b[0;34m,\u001b[0m\u001b[0;34m:\u001b[0m\u001b[0;34m-\u001b[0m\u001b[0;36m1\u001b[0m\u001b[0;34m]\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mto_csv\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mresult_filename\u001b[0m\u001b[0;34m,\u001b[0m\u001b[0mindex\u001b[0m\u001b[0;34m=\u001b[0m\u001b[0;32mNone\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n",
            "\u001b[0;32m/content/Pfeature/Pfeature/pfeature.py\u001b[0m in \u001b[0;36mdpc_comp\u001b[0;34m(file, q, out)\u001b[0m\n\u001b[1;32m    143\u001b[0m                 \u001b[0mtemp\u001b[0m \u001b[0;34m=\u001b[0m \u001b[0mj\u001b[0m\u001b[0;34m+\u001b[0m\u001b[0mk\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m    144\u001b[0m                 \u001b[0;32mfor\u001b[0m \u001b[0mm3\u001b[0m \u001b[0;32min\u001b[0m \u001b[0mrange\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0;36m0\u001b[0m\u001b[0;34m,\u001b[0m\u001b[0mlen\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mzz\u001b[0m\u001b[0;34m[\u001b[0m\u001b[0mi\u001b[0m\u001b[0;34m]\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m-\u001b[0m\u001b[0mq\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m:\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0;32m--> 145\u001b[0;31m                     \u001b[0mb\u001b[0m \u001b[0;34m=\u001b[0m \u001b[0mzz\u001b[0m\u001b[0;34m[\u001b[0m\u001b[0mi\u001b[0m\u001b[0;34m]\u001b[0m\u001b[0;34m[\u001b[0m\u001b[0mm3\u001b[0m\u001b[0;34m:\u001b[0m\u001b[0mm3\u001b[0m\u001b[0;34m+\u001b[0m\u001b[0mq\u001b[0m\u001b[0;34m+\u001b[0m\u001b[0;36m1\u001b[0m\u001b[0;34m:\u001b[0m\u001b[0mq\u001b[0m\u001b[0;34m]\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m    146\u001b[0m                    \u001b[0;31m# b.upper()\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m    147\u001b[0m \u001b[0;34m\u001b[0m\u001b[0m\n",
            "\u001b[0;32m/usr/local/lib/python3.6/dist-packages/pandas/core/series.py\u001b[0m in \u001b[0;36m__getitem__\u001b[0;34m(self, key)\u001b[0m\n\u001b[1;32m    876\u001b[0m             \u001b[0mkey\u001b[0m \u001b[0;34m=\u001b[0m \u001b[0munpack_1tuple\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mkey\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m    877\u001b[0m \u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0;32m--> 878\u001b[0;31m         \u001b[0;32mif\u001b[0m \u001b[0mis_integer\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mkey\u001b[0m\u001b[0;34m)\u001b[0m \u001b[0;32mand\u001b[0m \u001b[0mself\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mindex\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0m_should_fallback_to_positional\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m:\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m    879\u001b[0m             \u001b[0;32mreturn\u001b[0m \u001b[0mself\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0m_values\u001b[0m\u001b[0;34m[\u001b[0m\u001b[0mkey\u001b[0m\u001b[0;34m]\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m    880\u001b[0m \u001b[0;34m\u001b[0m\u001b[0m\n",
            "\u001b[0;32m/usr/local/lib/python3.6/dist-packages/pandas/core/indexes/base.py\u001b[0m in \u001b[0;36m_should_fallback_to_positional\u001b[0;34m(self)\u001b[0m\n\u001b[1;32m   4620\u001b[0m         \u001b[0mShould\u001b[0m \u001b[0man\u001b[0m \u001b[0minteger\u001b[0m \u001b[0mkey\u001b[0m \u001b[0mbe\u001b[0m \u001b[0mtreated\u001b[0m \u001b[0;32mas\u001b[0m \u001b[0mpositional\u001b[0m\u001b[0;31m?\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m   4621\u001b[0m         \"\"\"\n\u001b[0;32m-> 4622\u001b[0;31m         \u001b[0;32mif\u001b[0m \u001b[0mself\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mholds_integer\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0;34m)\u001b[0m \u001b[0;32mor\u001b[0m \u001b[0mself\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mis_boolean\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m:\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m   4623\u001b[0m             \u001b[0;32mreturn\u001b[0m \u001b[0;32mFalse\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m   4624\u001b[0m         \u001b[0;32mreturn\u001b[0m \u001b[0;32mTrue\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n",
            "\u001b[0;31mKeyboardInterrupt\u001b[0m: "
          ]
        }
      ]
    },
    {
      "cell_type": "markdown",
      "metadata": {
        "id": "-LFnEW2P8HJ_"
      },
      "source": [
        "### **Calculate feature for both positive and negative classes + combines the two classes + merge with class labels**"
      ]
    },
    {
      "cell_type": "code",
      "metadata": {
        "colab": {
          "base_uri": "https://localhost:8080/",
          "height": 419
        },
        "id": "byXTW1Zi42S4",
        "outputId": "903a2c90-d8d0-4019-ab8a-e88e836f5232"
      },
      "source": [
        "pos = 'train_po_cdhit.txt'\n",
        "neg = 'train_ne_cdhit.txt'\n",
        "\n",
        "def feature_calc(po, ne, feature_name):\n",
        "  # Calculate feature\n",
        "  po_feature = feature_name(po)\n",
        "  ne_feature = feature_name(ne)\n",
        "  # Create class labels\n",
        "  po_class = pd.Series(['positive' for i in range(len(po_feature))])\n",
        "  ne_class = pd.Series(['negative' for i in range(len(ne_feature))])\n",
        "  # Combine po and ne\n",
        "  po_ne_class = pd.concat([po_class, ne_class], axis=0)\n",
        "  po_ne_class.name = 'class'\n",
        "  po_ne_feature = pd.concat([po_feature, ne_feature], axis=0)\n",
        "  # Combine feature and class\n",
        "  df = pd.concat([po_ne_feature, po_ne_class], axis=1)\n",
        "  return df\n",
        "\n",
        "feature = feature_calc(pos, neg, aac) # AAC\n",
        "#feature = feature_calc(pos, neg, dpc) # DPC\n",
        "feature"
      ],
      "execution_count": null,
      "outputs": [
        {
          "output_type": "execute_result",
          "data": {
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              "  <thead>\n",
              "    <tr style=\"text-align: right;\">\n",
              "      <th></th>\n",
              "      <th>AAC_A</th>\n",
              "      <th>AAC_C</th>\n",
              "      <th>AAC_D</th>\n",
              "      <th>AAC_E</th>\n",
              "      <th>AAC_F</th>\n",
              "      <th>AAC_G</th>\n",
              "      <th>AAC_H</th>\n",
              "      <th>AAC_I</th>\n",
              "      <th>AAC_K</th>\n",
              "      <th>AAC_L</th>\n",
              "      <th>AAC_M</th>\n",
              "      <th>AAC_N</th>\n",
              "      <th>AAC_P</th>\n",
              "      <th>AAC_Q</th>\n",
              "      <th>AAC_R</th>\n",
              "      <th>AAC_S</th>\n",
              "      <th>AAC_T</th>\n",
              "      <th>AAC_V</th>\n",
              "      <th>AAC_W</th>\n",
              "      <th>AAC_Y</th>\n",
              "      <th>class</th>\n",
              "    </tr>\n",
              "  </thead>\n",
              "  <tbody>\n",
              "    <tr>\n",
              "      <th>0</th>\n",
              "      <td>27.27</td>\n",
              "      <td>0.00</td>\n",
              "      <td>9.09</td>\n",
              "      <td>0.00</td>\n",
              "      <td>9.09</td>\n",
              "      <td>9.09</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>9.09</td>\n",
              "      <td>9.09</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>18.18</td>\n",
              "      <td>0.0</td>\n",
              "      <td>9.09</td>\n",
              "      <td>positive</td>\n",
              "    </tr>\n",
              "    <tr>\n",
              "      <th>1</th>\n",
              "      <td>0.00</td>\n",
              "      <td>54.55</td>\n",
              "      <td>0.00</td>\n",
              "      <td>9.09</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>18.18</td>\n",
              "      <td>18.18</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.0</td>\n",
              "      <td>0.00</td>\n",
              "      <td>positive</td>\n",
              "    </tr>\n",
              "    <tr>\n",
              "      <th>2</th>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>9.09</td>\n",
              "      <td>18.18</td>\n",
              "      <td>9.09</td>\n",
              "      <td>9.09</td>\n",
              "      <td>9.09</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>9.09</td>\n",
              "      <td>9.09</td>\n",
              "      <td>0.00</td>\n",
              "      <td>18.18</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>9.09</td>\n",
              "      <td>0.0</td>\n",
              "      <td>0.00</td>\n",
              "      <td>positive</td>\n",
              "    </tr>\n",
              "    <tr>\n",
              "      <th>3</th>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>18.18</td>\n",
              "      <td>9.09</td>\n",
              "      <td>9.09</td>\n",
              "      <td>9.09</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>9.09</td>\n",
              "      <td>9.09</td>\n",
              "      <td>9.09</td>\n",
              "      <td>18.18</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>9.09</td>\n",
              "      <td>0.0</td>\n",
              "      <td>0.00</td>\n",
              "      <td>positive</td>\n",
              "    </tr>\n",
              "    <tr>\n",
              "      <th>4</th>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>9.09</td>\n",
              "      <td>18.18</td>\n",
              "      <td>18.18</td>\n",
              "      <td>9.09</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>9.09</td>\n",
              "      <td>9.09</td>\n",
              "      <td>9.09</td>\n",
              "      <td>18.18</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.0</td>\n",
              "      <td>0.00</td>\n",
              "      <td>positive</td>\n",
              "    </tr>\n",
              "    <tr>\n",
              "      <th>...</th>\n",
              "      <td>...</td>\n",
              "      <td>...</td>\n",
              "      <td>...</td>\n",
              "      <td>...</td>\n",
              "      <td>...</td>\n",
              "      <td>...</td>\n",
              "      <td>...</td>\n",
              "      <td>...</td>\n",
              "      <td>...</td>\n",
              "      <td>...</td>\n",
              "      <td>...</td>\n",
              "      <td>...</td>\n",
              "      <td>...</td>\n",
              "      <td>...</td>\n",
              "      <td>...</td>\n",
              "      <td>...</td>\n",
              "      <td>...</td>\n",
              "      <td>...</td>\n",
              "      <td>...</td>\n",
              "      <td>...</td>\n",
              "      <td>...</td>\n",
              "    </tr>\n",
              "    <tr>\n",
              "      <th>1417</th>\n",
              "      <td>13.33</td>\n",
              "      <td>0.00</td>\n",
              "      <td>3.33</td>\n",
              "      <td>3.33</td>\n",
              "      <td>0.00</td>\n",
              "      <td>13.33</td>\n",
              "      <td>0.00</td>\n",
              "      <td>3.33</td>\n",
              "      <td>26.67</td>\n",
              "      <td>10.00</td>\n",
              "      <td>3.33</td>\n",
              "      <td>3.33</td>\n",
              "      <td>3.33</td>\n",
              "      <td>3.33</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>3.33</td>\n",
              "      <td>0.00</td>\n",
              "      <td>10.0</td>\n",
              "      <td>0.00</td>\n",
              "      <td>negative</td>\n",
              "    </tr>\n",
              "    <tr>\n",
              "      <th>1418</th>\n",
              "      <td>6.67</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>3.33</td>\n",
              "      <td>6.67</td>\n",
              "      <td>20.00</td>\n",
              "      <td>3.33</td>\n",
              "      <td>3.33</td>\n",
              "      <td>13.33</td>\n",
              "      <td>13.33</td>\n",
              "      <td>3.33</td>\n",
              "      <td>0.00</td>\n",
              "      <td>3.33</td>\n",
              "      <td>10.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>6.67</td>\n",
              "      <td>3.33</td>\n",
              "      <td>3.33</td>\n",
              "      <td>0.0</td>\n",
              "      <td>0.00</td>\n",
              "      <td>negative</td>\n",
              "    </tr>\n",
              "    <tr>\n",
              "      <th>1419</th>\n",
              "      <td>6.67</td>\n",
              "      <td>20.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>3.33</td>\n",
              "      <td>0.00</td>\n",
              "      <td>10.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>6.67</td>\n",
              "      <td>10.00</td>\n",
              "      <td>3.33</td>\n",
              "      <td>0.00</td>\n",
              "      <td>3.33</td>\n",
              "      <td>6.67</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>6.67</td>\n",
              "      <td>6.67</td>\n",
              "      <td>10.00</td>\n",
              "      <td>0.0</td>\n",
              "      <td>6.67</td>\n",
              "      <td>negative</td>\n",
              "    </tr>\n",
              "    <tr>\n",
              "      <th>1420</th>\n",
              "      <td>6.67</td>\n",
              "      <td>0.00</td>\n",
              "      <td>3.33</td>\n",
              "      <td>3.33</td>\n",
              "      <td>6.67</td>\n",
              "      <td>0.00</td>\n",
              "      <td>3.33</td>\n",
              "      <td>3.33</td>\n",
              "      <td>3.33</td>\n",
              "      <td>6.67</td>\n",
              "      <td>3.33</td>\n",
              "      <td>16.67</td>\n",
              "      <td>3.33</td>\n",
              "      <td>6.67</td>\n",
              "      <td>10.00</td>\n",
              "      <td>6.67</td>\n",
              "      <td>0.00</td>\n",
              "      <td>13.33</td>\n",
              "      <td>0.0</td>\n",
              "      <td>3.33</td>\n",
              "      <td>negative</td>\n",
              "    </tr>\n",
              "    <tr>\n",
              "      <th>1421</th>\n",
              "      <td>0.00</td>\n",
              "      <td>20.00</td>\n",
              "      <td>6.67</td>\n",
              "      <td>6.67</td>\n",
              "      <td>0.00</td>\n",
              "      <td>6.67</td>\n",
              "      <td>6.67</td>\n",
              "      <td>6.67</td>\n",
              "      <td>6.67</td>\n",
              "      <td>10.00</td>\n",
              "      <td>10.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>6.67</td>\n",
              "      <td>0.00</td>\n",
              "      <td>3.33</td>\n",
              "      <td>3.33</td>\n",
              "      <td>0.00</td>\n",
              "      <td>3.33</td>\n",
              "      <td>0.0</td>\n",
              "      <td>3.33</td>\n",
              "      <td>negative</td>\n",
              "    </tr>\n",
              "  </tbody>\n",
              "</table>\n",
              "<p>2759 rows × 21 columns</p>\n",
              "</div>"
            ],
            "text/plain": [
              "      AAC_A  AAC_C  AAC_D  AAC_E  AAC_F  ...  AAC_T  AAC_V  AAC_W  AAC_Y     class\n",
              "0     27.27   0.00   9.09   0.00   9.09  ...   0.00  18.18    0.0   9.09  positive\n",
              "1      0.00  54.55   0.00   9.09   0.00  ...  18.18   0.00    0.0   0.00  positive\n",
              "2      0.00   0.00   9.09  18.18   9.09  ...   0.00   9.09    0.0   0.00  positive\n",
              "3      0.00   0.00   0.00  18.18   9.09  ...   0.00   9.09    0.0   0.00  positive\n",
              "4      0.00   0.00   9.09  18.18  18.18  ...   0.00   0.00    0.0   0.00  positive\n",
              "...     ...    ...    ...    ...    ...  ...    ...    ...    ...    ...       ...\n",
              "1417  13.33   0.00   3.33   3.33   0.00  ...   3.33   0.00   10.0   0.00  negative\n",
              "1418   6.67   0.00   0.00   3.33   6.67  ...   3.33   3.33    0.0   0.00  negative\n",
              "1419   6.67  20.00   0.00   3.33   0.00  ...   6.67  10.00    0.0   6.67  negative\n",
              "1420   6.67   0.00   3.33   3.33   6.67  ...   0.00  13.33    0.0   3.33  negative\n",
              "1421   0.00  20.00   6.67   6.67   0.00  ...   0.00   3.33    0.0   3.33  negative\n",
              "\n",
              "[2759 rows x 21 columns]"
            ]
          },
          "metadata": {
            "tags": []
          },
          "execution_count": 20
        }
      ]
    },
    {
      "cell_type": "markdown",
      "metadata": {
        "id": "H9MRC7xR8eJi"
      },
      "source": [
        "# **Data pre-processing**"
      ]
    },
    {
      "cell_type": "code",
      "metadata": {
        "colab": {
          "base_uri": "https://localhost:8080/",
          "height": 419
        },
        "id": "qtMfXpCzFyWC",
        "outputId": "c207d3b5-8a27-4afd-af5d-f0a05c5189bf"
      },
      "source": [
        "feature"
      ],
      "execution_count": null,
      "outputs": [
        {
          "output_type": "execute_result",
          "data": {
            "text/html": [
              "<div>\n",
              "<style scoped>\n",
              "    .dataframe tbody tr th:only-of-type {\n",
              "        vertical-align: middle;\n",
              "    }\n",
              "\n",
              "    .dataframe tbody tr th {\n",
              "        vertical-align: top;\n",
              "    }\n",
              "\n",
              "    .dataframe thead th {\n",
              "        text-align: right;\n",
              "    }\n",
              "</style>\n",
              "<table border=\"1\" class=\"dataframe\">\n",
              "  <thead>\n",
              "    <tr style=\"text-align: right;\">\n",
              "      <th></th>\n",
              "      <th>AAC_A</th>\n",
              "      <th>AAC_C</th>\n",
              "      <th>AAC_D</th>\n",
              "      <th>AAC_E</th>\n",
              "      <th>AAC_F</th>\n",
              "      <th>AAC_G</th>\n",
              "      <th>AAC_H</th>\n",
              "      <th>AAC_I</th>\n",
              "      <th>AAC_K</th>\n",
              "      <th>AAC_L</th>\n",
              "      <th>AAC_M</th>\n",
              "      <th>AAC_N</th>\n",
              "      <th>AAC_P</th>\n",
              "      <th>AAC_Q</th>\n",
              "      <th>AAC_R</th>\n",
              "      <th>AAC_S</th>\n",
              "      <th>AAC_T</th>\n",
              "      <th>AAC_V</th>\n",
              "      <th>AAC_W</th>\n",
              "      <th>AAC_Y</th>\n",
              "      <th>class</th>\n",
              "    </tr>\n",
              "  </thead>\n",
              "  <tbody>\n",
              "    <tr>\n",
              "      <th>0</th>\n",
              "      <td>27.27</td>\n",
              "      <td>0.00</td>\n",
              "      <td>9.09</td>\n",
              "      <td>0.00</td>\n",
              "      <td>9.09</td>\n",
              "      <td>9.09</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>9.09</td>\n",
              "      <td>9.09</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>18.18</td>\n",
              "      <td>0.0</td>\n",
              "      <td>9.09</td>\n",
              "      <td>positive</td>\n",
              "    </tr>\n",
              "    <tr>\n",
              "      <th>1</th>\n",
              "      <td>0.00</td>\n",
              "      <td>54.55</td>\n",
              "      <td>0.00</td>\n",
              "      <td>9.09</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>18.18</td>\n",
              "      <td>18.18</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.0</td>\n",
              "      <td>0.00</td>\n",
              "      <td>positive</td>\n",
              "    </tr>\n",
              "    <tr>\n",
              "      <th>2</th>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>9.09</td>\n",
              "      <td>18.18</td>\n",
              "      <td>9.09</td>\n",
              "      <td>9.09</td>\n",
              "      <td>9.09</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>9.09</td>\n",
              "      <td>9.09</td>\n",
              "      <td>0.00</td>\n",
              "      <td>18.18</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>9.09</td>\n",
              "      <td>0.0</td>\n",
              "      <td>0.00</td>\n",
              "      <td>positive</td>\n",
              "    </tr>\n",
              "    <tr>\n",
              "      <th>3</th>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>18.18</td>\n",
              "      <td>9.09</td>\n",
              "      <td>9.09</td>\n",
              "      <td>9.09</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>9.09</td>\n",
              "      <td>9.09</td>\n",
              "      <td>9.09</td>\n",
              "      <td>18.18</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>9.09</td>\n",
              "      <td>0.0</td>\n",
              "      <td>0.00</td>\n",
              "      <td>positive</td>\n",
              "    </tr>\n",
              "    <tr>\n",
              "      <th>4</th>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>9.09</td>\n",
              "      <td>18.18</td>\n",
              "      <td>18.18</td>\n",
              "      <td>9.09</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>9.09</td>\n",
              "      <td>9.09</td>\n",
              "      <td>9.09</td>\n",
              "      <td>18.18</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.0</td>\n",
              "      <td>0.00</td>\n",
              "      <td>positive</td>\n",
              "    </tr>\n",
              "    <tr>\n",
              "      <th>...</th>\n",
              "      <td>...</td>\n",
              "      <td>...</td>\n",
              "      <td>...</td>\n",
              "      <td>...</td>\n",
              "      <td>...</td>\n",
              "      <td>...</td>\n",
              "      <td>...</td>\n",
              "      <td>...</td>\n",
              "      <td>...</td>\n",
              "      <td>...</td>\n",
              "      <td>...</td>\n",
              "      <td>...</td>\n",
              "      <td>...</td>\n",
              "      <td>...</td>\n",
              "      <td>...</td>\n",
              "      <td>...</td>\n",
              "      <td>...</td>\n",
              "      <td>...</td>\n",
              "      <td>...</td>\n",
              "      <td>...</td>\n",
              "      <td>...</td>\n",
              "    </tr>\n",
              "    <tr>\n",
              "      <th>1417</th>\n",
              "      <td>13.33</td>\n",
              "      <td>0.00</td>\n",
              "      <td>3.33</td>\n",
              "      <td>3.33</td>\n",
              "      <td>0.00</td>\n",
              "      <td>13.33</td>\n",
              "      <td>0.00</td>\n",
              "      <td>3.33</td>\n",
              "      <td>26.67</td>\n",
              "      <td>10.00</td>\n",
              "      <td>3.33</td>\n",
              "      <td>3.33</td>\n",
              "      <td>3.33</td>\n",
              "      <td>3.33</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>3.33</td>\n",
              "      <td>0.00</td>\n",
              "      <td>10.0</td>\n",
              "      <td>0.00</td>\n",
              "      <td>negative</td>\n",
              "    </tr>\n",
              "    <tr>\n",
              "      <th>1418</th>\n",
              "      <td>6.67</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>3.33</td>\n",
              "      <td>6.67</td>\n",
              "      <td>20.00</td>\n",
              "      <td>3.33</td>\n",
              "      <td>3.33</td>\n",
              "      <td>13.33</td>\n",
              "      <td>13.33</td>\n",
              "      <td>3.33</td>\n",
              "      <td>0.00</td>\n",
              "      <td>3.33</td>\n",
              "      <td>10.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>6.67</td>\n",
              "      <td>3.33</td>\n",
              "      <td>3.33</td>\n",
              "      <td>0.0</td>\n",
              "      <td>0.00</td>\n",
              "      <td>negative</td>\n",
              "    </tr>\n",
              "    <tr>\n",
              "      <th>1419</th>\n",
              "      <td>6.67</td>\n",
              "      <td>20.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>3.33</td>\n",
              "      <td>0.00</td>\n",
              "      <td>10.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>6.67</td>\n",
              "      <td>10.00</td>\n",
              "      <td>3.33</td>\n",
              "      <td>0.00</td>\n",
              "      <td>3.33</td>\n",
              "      <td>6.67</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>6.67</td>\n",
              "      <td>6.67</td>\n",
              "      <td>10.00</td>\n",
              "      <td>0.0</td>\n",
              "      <td>6.67</td>\n",
              "      <td>negative</td>\n",
              "    </tr>\n",
              "    <tr>\n",
              "      <th>1420</th>\n",
              "      <td>6.67</td>\n",
              "      <td>0.00</td>\n",
              "      <td>3.33</td>\n",
              "      <td>3.33</td>\n",
              "      <td>6.67</td>\n",
              "      <td>0.00</td>\n",
              "      <td>3.33</td>\n",
              "      <td>3.33</td>\n",
              "      <td>3.33</td>\n",
              "      <td>6.67</td>\n",
              "      <td>3.33</td>\n",
              "      <td>16.67</td>\n",
              "      <td>3.33</td>\n",
              "      <td>6.67</td>\n",
              "      <td>10.00</td>\n",
              "      <td>6.67</td>\n",
              "      <td>0.00</td>\n",
              "      <td>13.33</td>\n",
              "      <td>0.0</td>\n",
              "      <td>3.33</td>\n",
              "      <td>negative</td>\n",
              "    </tr>\n",
              "    <tr>\n",
              "      <th>1421</th>\n",
              "      <td>0.00</td>\n",
              "      <td>20.00</td>\n",
              "      <td>6.67</td>\n",
              "      <td>6.67</td>\n",
              "      <td>0.00</td>\n",
              "      <td>6.67</td>\n",
              "      <td>6.67</td>\n",
              "      <td>6.67</td>\n",
              "      <td>6.67</td>\n",
              "      <td>10.00</td>\n",
              "      <td>10.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>6.67</td>\n",
              "      <td>0.00</td>\n",
              "      <td>3.33</td>\n",
              "      <td>3.33</td>\n",
              "      <td>0.00</td>\n",
              "      <td>3.33</td>\n",
              "      <td>0.0</td>\n",
              "      <td>3.33</td>\n",
              "      <td>negative</td>\n",
              "    </tr>\n",
              "  </tbody>\n",
              "</table>\n",
              "<p>2759 rows × 21 columns</p>\n",
              "</div>"
            ],
            "text/plain": [
              "      AAC_A  AAC_C  AAC_D  AAC_E  AAC_F  ...  AAC_T  AAC_V  AAC_W  AAC_Y     class\n",
              "0     27.27   0.00   9.09   0.00   9.09  ...   0.00  18.18    0.0   9.09  positive\n",
              "1      0.00  54.55   0.00   9.09   0.00  ...  18.18   0.00    0.0   0.00  positive\n",
              "2      0.00   0.00   9.09  18.18   9.09  ...   0.00   9.09    0.0   0.00  positive\n",
              "3      0.00   0.00   0.00  18.18   9.09  ...   0.00   9.09    0.0   0.00  positive\n",
              "4      0.00   0.00   9.09  18.18  18.18  ...   0.00   0.00    0.0   0.00  positive\n",
              "...     ...    ...    ...    ...    ...  ...    ...    ...    ...    ...       ...\n",
              "1417  13.33   0.00   3.33   3.33   0.00  ...   3.33   0.00   10.0   0.00  negative\n",
              "1418   6.67   0.00   0.00   3.33   6.67  ...   3.33   3.33    0.0   0.00  negative\n",
              "1419   6.67  20.00   0.00   3.33   0.00  ...   6.67  10.00    0.0   6.67  negative\n",
              "1420   6.67   0.00   3.33   3.33   6.67  ...   0.00  13.33    0.0   3.33  negative\n",
              "1421   0.00  20.00   6.67   6.67   0.00  ...   0.00   3.33    0.0   3.33  negative\n",
              "\n",
              "[2759 rows x 21 columns]"
            ]
          },
          "metadata": {
            "tags": []
          },
          "execution_count": 21
        }
      ]
    },
    {
      "cell_type": "code",
      "metadata": {
        "id": "rJXKLewidNOx"
      },
      "source": [
        "# Assigns the features to X and class label to Y\n",
        "X = feature.drop('class', axis=1)\n",
        "y = feature['class'].copy()"
      ],
      "execution_count": null,
      "outputs": []
    },
    {
      "cell_type": "code",
      "metadata": {
        "id": "F6vgehkJDNNq"
      },
      "source": [
        "# Encoding the Y class label\n",
        "y = y.map({\"positive\": 1, \"negative\": 0})  "
      ],
      "execution_count": null,
      "outputs": []
    },
    {
      "cell_type": "code",
      "metadata": {
        "colab": {
          "base_uri": "https://localhost:8080/"
        },
        "id": "e-stJs6tp_xQ",
        "outputId": "58ea1059-7743-4c7e-cc4f-542e505b3475"
      },
      "source": [
        "X.shape"
      ],
      "execution_count": null,
      "outputs": [
        {
          "output_type": "execute_result",
          "data": {
            "text/plain": [
              "(2759, 20)"
            ]
          },
          "metadata": {
            "tags": []
          },
          "execution_count": 24
        }
      ]
    },
    {
      "cell_type": "code",
      "metadata": {
        "colab": {
          "base_uri": "https://localhost:8080/",
          "height": 419
        },
        "id": "4fhK1P57w64J",
        "outputId": "8f128e8e-36e9-4f1e-9a0d-dceb9adf6e0d"
      },
      "source": [
        "# Feature selection (Variance threshold)\n",
        "from sklearn.feature_selection import VarianceThreshold\n",
        "\n",
        "fs = VarianceThreshold(threshold=0.1)\n",
        "fs.fit_transform(X)\n",
        "#X2.shape\n",
        "X2 = X.loc[:, fs.get_support()]\n",
        "X2"
      ],
      "execution_count": null,
      "outputs": [
        {
          "output_type": "execute_result",
          "data": {
            "text/html": [
              "<div>\n",
              "<style scoped>\n",
              "    .dataframe tbody tr th:only-of-type {\n",
              "        vertical-align: middle;\n",
              "    }\n",
              "\n",
              "    .dataframe tbody tr th {\n",
              "        vertical-align: top;\n",
              "    }\n",
              "\n",
              "    .dataframe thead th {\n",
              "        text-align: right;\n",
              "    }\n",
              "</style>\n",
              "<table border=\"1\" class=\"dataframe\">\n",
              "  <thead>\n",
              "    <tr style=\"text-align: right;\">\n",
              "      <th></th>\n",
              "      <th>AAC_A</th>\n",
              "      <th>AAC_C</th>\n",
              "      <th>AAC_D</th>\n",
              "      <th>AAC_E</th>\n",
              "      <th>AAC_F</th>\n",
              "      <th>AAC_G</th>\n",
              "      <th>AAC_H</th>\n",
              "      <th>AAC_I</th>\n",
              "      <th>AAC_K</th>\n",
              "      <th>AAC_L</th>\n",
              "      <th>AAC_M</th>\n",
              "      <th>AAC_N</th>\n",
              "      <th>AAC_P</th>\n",
              "      <th>AAC_Q</th>\n",
              "      <th>AAC_R</th>\n",
              "      <th>AAC_S</th>\n",
              "      <th>AAC_T</th>\n",
              "      <th>AAC_V</th>\n",
              "      <th>AAC_W</th>\n",
              "      <th>AAC_Y</th>\n",
              "    </tr>\n",
              "  </thead>\n",
              "  <tbody>\n",
              "    <tr>\n",
              "      <th>0</th>\n",
              "      <td>27.27</td>\n",
              "      <td>0.00</td>\n",
              "      <td>9.09</td>\n",
              "      <td>0.00</td>\n",
              "      <td>9.09</td>\n",
              "      <td>9.09</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>9.09</td>\n",
              "      <td>9.09</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>18.18</td>\n",
              "      <td>0.0</td>\n",
              "      <td>9.09</td>\n",
              "    </tr>\n",
              "    <tr>\n",
              "      <th>1</th>\n",
              "      <td>0.00</td>\n",
              "      <td>54.55</td>\n",
              "      <td>0.00</td>\n",
              "      <td>9.09</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>18.18</td>\n",
              "      <td>18.18</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.0</td>\n",
              "      <td>0.00</td>\n",
              "    </tr>\n",
              "    <tr>\n",
              "      <th>2</th>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>9.09</td>\n",
              "      <td>18.18</td>\n",
              "      <td>9.09</td>\n",
              "      <td>9.09</td>\n",
              "      <td>9.09</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>9.09</td>\n",
              "      <td>9.09</td>\n",
              "      <td>0.00</td>\n",
              "      <td>18.18</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>9.09</td>\n",
              "      <td>0.0</td>\n",
              "      <td>0.00</td>\n",
              "    </tr>\n",
              "    <tr>\n",
              "      <th>3</th>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>18.18</td>\n",
              "      <td>9.09</td>\n",
              "      <td>9.09</td>\n",
              "      <td>9.09</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>9.09</td>\n",
              "      <td>9.09</td>\n",
              "      <td>9.09</td>\n",
              "      <td>18.18</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>9.09</td>\n",
              "      <td>0.0</td>\n",
              "      <td>0.00</td>\n",
              "    </tr>\n",
              "    <tr>\n",
              "      <th>4</th>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>9.09</td>\n",
              "      <td>18.18</td>\n",
              "      <td>18.18</td>\n",
              "      <td>9.09</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>9.09</td>\n",
              "      <td>9.09</td>\n",
              "      <td>9.09</td>\n",
              "      <td>18.18</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.0</td>\n",
              "      <td>0.00</td>\n",
              "    </tr>\n",
              "    <tr>\n",
              "      <th>...</th>\n",
              "      <td>...</td>\n",
              "      <td>...</td>\n",
              "      <td>...</td>\n",
              "      <td>...</td>\n",
              "      <td>...</td>\n",
              "      <td>...</td>\n",
              "      <td>...</td>\n",
              "      <td>...</td>\n",
              "      <td>...</td>\n",
              "      <td>...</td>\n",
              "      <td>...</td>\n",
              "      <td>...</td>\n",
              "      <td>...</td>\n",
              "      <td>...</td>\n",
              "      <td>...</td>\n",
              "      <td>...</td>\n",
              "      <td>...</td>\n",
              "      <td>...</td>\n",
              "      <td>...</td>\n",
              "      <td>...</td>\n",
              "    </tr>\n",
              "    <tr>\n",
              "      <th>1417</th>\n",
              "      <td>13.33</td>\n",
              "      <td>0.00</td>\n",
              "      <td>3.33</td>\n",
              "      <td>3.33</td>\n",
              "      <td>0.00</td>\n",
              "      <td>13.33</td>\n",
              "      <td>0.00</td>\n",
              "      <td>3.33</td>\n",
              "      <td>26.67</td>\n",
              "      <td>10.00</td>\n",
              "      <td>3.33</td>\n",
              "      <td>3.33</td>\n",
              "      <td>3.33</td>\n",
              "      <td>3.33</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>3.33</td>\n",
              "      <td>0.00</td>\n",
              "      <td>10.0</td>\n",
              "      <td>0.00</td>\n",
              "    </tr>\n",
              "    <tr>\n",
              "      <th>1418</th>\n",
              "      <td>6.67</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>3.33</td>\n",
              "      <td>6.67</td>\n",
              "      <td>20.00</td>\n",
              "      <td>3.33</td>\n",
              "      <td>3.33</td>\n",
              "      <td>13.33</td>\n",
              "      <td>13.33</td>\n",
              "      <td>3.33</td>\n",
              "      <td>0.00</td>\n",
              "      <td>3.33</td>\n",
              "      <td>10.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>6.67</td>\n",
              "      <td>3.33</td>\n",
              "      <td>3.33</td>\n",
              "      <td>0.0</td>\n",
              "      <td>0.00</td>\n",
              "    </tr>\n",
              "    <tr>\n",
              "      <th>1419</th>\n",
              "      <td>6.67</td>\n",
              "      <td>20.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>3.33</td>\n",
              "      <td>0.00</td>\n",
              "      <td>10.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>6.67</td>\n",
              "      <td>10.00</td>\n",
              "      <td>3.33</td>\n",
              "      <td>0.00</td>\n",
              "      <td>3.33</td>\n",
              "      <td>6.67</td>\n",
              "      <td>0.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>6.67</td>\n",
              "      <td>6.67</td>\n",
              "      <td>10.00</td>\n",
              "      <td>0.0</td>\n",
              "      <td>6.67</td>\n",
              "    </tr>\n",
              "    <tr>\n",
              "      <th>1420</th>\n",
              "      <td>6.67</td>\n",
              "      <td>0.00</td>\n",
              "      <td>3.33</td>\n",
              "      <td>3.33</td>\n",
              "      <td>6.67</td>\n",
              "      <td>0.00</td>\n",
              "      <td>3.33</td>\n",
              "      <td>3.33</td>\n",
              "      <td>3.33</td>\n",
              "      <td>6.67</td>\n",
              "      <td>3.33</td>\n",
              "      <td>16.67</td>\n",
              "      <td>3.33</td>\n",
              "      <td>6.67</td>\n",
              "      <td>10.00</td>\n",
              "      <td>6.67</td>\n",
              "      <td>0.00</td>\n",
              "      <td>13.33</td>\n",
              "      <td>0.0</td>\n",
              "      <td>3.33</td>\n",
              "    </tr>\n",
              "    <tr>\n",
              "      <th>1421</th>\n",
              "      <td>0.00</td>\n",
              "      <td>20.00</td>\n",
              "      <td>6.67</td>\n",
              "      <td>6.67</td>\n",
              "      <td>0.00</td>\n",
              "      <td>6.67</td>\n",
              "      <td>6.67</td>\n",
              "      <td>6.67</td>\n",
              "      <td>6.67</td>\n",
              "      <td>10.00</td>\n",
              "      <td>10.00</td>\n",
              "      <td>0.00</td>\n",
              "      <td>6.67</td>\n",
              "      <td>0.00</td>\n",
              "      <td>3.33</td>\n",
              "      <td>3.33</td>\n",
              "      <td>0.00</td>\n",
              "      <td>3.33</td>\n",
              "      <td>0.0</td>\n",
              "      <td>3.33</td>\n",
              "    </tr>\n",
              "  </tbody>\n",
              "</table>\n",
              "<p>2759 rows × 20 columns</p>\n",
              "</div>"
            ],
            "text/plain": [
              "      AAC_A  AAC_C  AAC_D  AAC_E  AAC_F  ...  AAC_S  AAC_T  AAC_V  AAC_W  AAC_Y\n",
              "0     27.27   0.00   9.09   0.00   9.09  ...   0.00   0.00  18.18    0.0   9.09\n",
              "1      0.00  54.55   0.00   9.09   0.00  ...  18.18  18.18   0.00    0.0   0.00\n",
              "2      0.00   0.00   9.09  18.18   9.09  ...   0.00   0.00   9.09    0.0   0.00\n",
              "3      0.00   0.00   0.00  18.18   9.09  ...   0.00   0.00   9.09    0.0   0.00\n",
              "4      0.00   0.00   9.09  18.18  18.18  ...   0.00   0.00   0.00    0.0   0.00\n",
              "...     ...    ...    ...    ...    ...  ...    ...    ...    ...    ...    ...\n",
              "1417  13.33   0.00   3.33   3.33   0.00  ...   0.00   3.33   0.00   10.0   0.00\n",
              "1418   6.67   0.00   0.00   3.33   6.67  ...   6.67   3.33   3.33    0.0   0.00\n",
              "1419   6.67  20.00   0.00   3.33   0.00  ...   6.67   6.67  10.00    0.0   6.67\n",
              "1420   6.67   0.00   3.33   3.33   6.67  ...   6.67   0.00  13.33    0.0   3.33\n",
              "1421   0.00  20.00   6.67   6.67   0.00  ...   3.33   0.00   3.33    0.0   3.33\n",
              "\n",
              "[2759 rows x 20 columns]"
            ]
          },
          "metadata": {
            "tags": []
          },
          "execution_count": 25
        }
      ]
    },
    {
      "cell_type": "code",
      "metadata": {
        "id": "k6DyYgenBRML"
      },
      "source": [
        "# Data split\n",
        "from sklearn.model_selection import train_test_split\n",
        "\n",
        "X_train, X_test, y_train, y_test = train_test_split(X2, y, test_size=0.2, random_state =42, stratify=y)"
      ],
      "execution_count": null,
      "outputs": []
    },
    {
      "cell_type": "markdown",
      "metadata": {
        "id": "yMZ7SIQPbSkl"
      },
      "source": [
        "---"
      ]
    },
    {
      "cell_type": "markdown",
      "metadata": {
        "id": "RewWucDQbTo3"
      },
      "source": [
        "# **Quickly compare >30 ML algorithms**"
      ]
    },
    {
      "cell_type": "code",
      "metadata": {
        "id": "kh-nDFnTbT-J"
      },
      "source": [
        "! pip install lazypredict"
      ],
      "execution_count": null,
      "outputs": []
    },
    {
      "cell_type": "code",
      "metadata": {
        "colab": {
          "base_uri": "https://localhost:8080/"
        },
        "id": "01B14Lz2bdMn",
        "outputId": "ca454ef2-f31c-44e3-9405-23cadf91cb80"
      },
      "source": [
        "# Import libraries\n",
        "import lazypredict\n",
        "from lazypredict.Supervised import LazyClassifier\n",
        "from sklearn.model_selection import train_test_split\n",
        "from sklearn.metrics import matthews_corrcoef\n",
        "\n",
        "# Load dataset\n",
        "X = feature.drop('class', axis=1)\n",
        "y = feature['class'].copy()\n",
        "\n",
        "# Data split\n",
        "X_train, X_test, y_train, y_test = train_test_split(X, y, test_size=0.2, random_state =42, stratify=y)\n",
        "\n",
        "# Defines and builds the lazyclassifier\n",
        "clf = LazyClassifier(verbose=0,ignore_warnings=True, custom_metric=matthews_corrcoef)\n",
        "models_train,predictions_train = clf.fit(X_train, X_train, y_train, y_train)\n",
        "#models_test,predictions_test = clf.fit(X_train, X_test, y_train, y_test)"
      ],
      "execution_count": null,
      "outputs": [
        {
          "output_type": "stream",
          "text": [
            "100%|██████████| 29/29 [00:07<00:00,  4.10it/s]\n"
          ],
          "name": "stderr"
        }
      ]
    },
    {
      "cell_type": "code",
      "metadata": {
        "colab": {
          "base_uri": "https://localhost:8080/",
          "height": 917
        },
        "id": "jlu6rioMb5pM",
        "outputId": "6c8f37d3-5a12-420a-b4ce-b10f801ad9cf"
      },
      "source": [
        "# Prints the model performance (Training set)\n",
        "models_train"
      ],
      "execution_count": null,
      "outputs": [
        {
          "output_type": "execute_result",
          "data": {
            "text/html": [
              "<div>\n",
              "<style scoped>\n",
              "    .dataframe tbody tr th:only-of-type {\n",
              "        vertical-align: middle;\n",
              "    }\n",
              "\n",
              "    .dataframe tbody tr th {\n",
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              "    }\n",
              "\n",
              "    .dataframe thead th {\n",
              "        text-align: right;\n",
              "    }\n",
              "</style>\n",
              "<table border=\"1\" class=\"dataframe\">\n",
              "  <thead>\n",
              "    <tr style=\"text-align: right;\">\n",
              "      <th></th>\n",
              "      <th>Accuracy</th>\n",
              "      <th>Balanced Accuracy</th>\n",
              "      <th>ROC AUC</th>\n",
              "      <th>F1 Score</th>\n",
              "      <th>matthews_corrcoef</th>\n",
              "      <th>Time Taken</th>\n",
              "    </tr>\n",
              "    <tr>\n",
              "      <th>Model</th>\n",
              "      <th></th>\n",
              "      <th></th>\n",
              "      <th></th>\n",
              "      <th></th>\n",
              "      <th></th>\n",
              "      <th></th>\n",
              "    </tr>\n",
              "  </thead>\n",
              "  <tbody>\n",
              "    <tr>\n",
              "      <th>RandomForestClassifier</th>\n",
              "      <td>0.93</td>\n",
              "      <td>0.93</td>\n",
              "      <td>None</td>\n",
              "      <td>0.93</td>\n",
              "      <td>0.86</td>\n",
              "      <td>0.59</td>\n",
              "    </tr>\n",
              "    <tr>\n",
              "      <th>LabelSpreading</th>\n",
              "      <td>0.93</td>\n",
              "      <td>0.93</td>\n",
              "      <td>None</td>\n",
              "      <td>0.93</td>\n",
              "      <td>0.86</td>\n",
              "      <td>0.68</td>\n",
              "    </tr>\n",
              "    <tr>\n",
              "      <th>LabelPropagation</th>\n",
              "      <td>0.93</td>\n",
              "      <td>0.93</td>\n",
              "      <td>None</td>\n",
              "      <td>0.93</td>\n",
              "      <td>0.86</td>\n",
              "      <td>0.58</td>\n",
              "    </tr>\n",
              "    <tr>\n",
              "      <th>DecisionTreeClassifier</th>\n",
              "      <td>0.93</td>\n",
              "      <td>0.93</td>\n",
              "      <td>None</td>\n",
              "      <td>0.93</td>\n",
              "      <td>0.86</td>\n",
              "      <td>0.07</td>\n",
              "    </tr>\n",
              "    <tr>\n",
              "      <th>ExtraTreeClassifier</th>\n",
              "      <td>0.93</td>\n",
              "      <td>0.93</td>\n",
              "      <td>None</td>\n",
              "      <td>0.93</td>\n",
              "      <td>0.86</td>\n",
              "      <td>0.05</td>\n",
              "    </tr>\n",
              "    <tr>\n",
              "      <th>ExtraTreesClassifier</th>\n",
              "      <td>0.93</td>\n",
              "      <td>0.93</td>\n",
              "      <td>None</td>\n",
              "      <td>0.93</td>\n",
              "      <td>0.86</td>\n",
              "      <td>0.41</td>\n",
              "    </tr>\n",
              "    <tr>\n",
              "      <th>LGBMClassifier</th>\n",
              "      <td>0.92</td>\n",
              "      <td>0.92</td>\n",
              "      <td>None</td>\n",
              "      <td>0.92</td>\n",
              "      <td>0.84</td>\n",
              "      <td>0.21</td>\n",
              "    </tr>\n",
              "    <tr>\n",
              "      <th>BaggingClassifier</th>\n",
              "      <td>0.92</td>\n",
              "      <td>0.92</td>\n",
              "      <td>None</td>\n",
              "      <td>0.92</td>\n",
              "      <td>0.83</td>\n",
              "      <td>0.20</td>\n",
              "    </tr>\n",
              "    <tr>\n",
              "      <th>NuSVC</th>\n",
              "      <td>0.86</td>\n",
              "      <td>0.86</td>\n",
              "      <td>None</td>\n",
              "      <td>0.86</td>\n",
              "      <td>0.72</td>\n",
              "      <td>0.51</td>\n",
              "    </tr>\n",
              "    <tr>\n",
              "      <th>SVC</th>\n",
              "      <td>0.82</td>\n",
              "      <td>0.82</td>\n",
              "      <td>None</td>\n",
              "      <td>0.82</td>\n",
              "      <td>0.65</td>\n",
              "      <td>0.44</td>\n",
              "    </tr>\n",
              "    <tr>\n",
              "      <th>KNeighborsClassifier</th>\n",
              "      <td>0.82</td>\n",
              "      <td>0.82</td>\n",
              "      <td>None</td>\n",
              "      <td>0.82</td>\n",
              "      <td>0.64</td>\n",
              "      <td>0.29</td>\n",
              "    </tr>\n",
              "    <tr>\n",
              "      <th>XGBClassifier</th>\n",
              "      <td>0.80</td>\n",
              "      <td>0.80</td>\n",
              "      <td>None</td>\n",
              "      <td>0.80</td>\n",
              "      <td>0.61</td>\n",
              "      <td>0.22</td>\n",
              "    </tr>\n",
              "    <tr>\n",
              "      <th>AdaBoostClassifier</th>\n",
              "      <td>0.76</td>\n",
              "      <td>0.76</td>\n",
              "      <td>None</td>\n",
              "      <td>0.76</td>\n",
              "      <td>0.51</td>\n",
              "      <td>0.34</td>\n",
              "    </tr>\n",
              "    <tr>\n",
              "      <th>QuadraticDiscriminantAnalysis</th>\n",
              "      <td>0.75</td>\n",
              "      <td>0.75</td>\n",
              "      <td>None</td>\n",
              "      <td>0.75</td>\n",
              "      <td>0.51</td>\n",
              "      <td>0.08</td>\n",
              "    </tr>\n",
              "    <tr>\n",
              "      <th>RidgeClassifier</th>\n",
              "      <td>0.74</td>\n",
              "      <td>0.74</td>\n",
              "      <td>None</td>\n",
              "      <td>0.74</td>\n",
              "      <td>0.48</td>\n",
              "      <td>0.08</td>\n",
              "    </tr>\n",
              "    <tr>\n",
              "      <th>RidgeClassifierCV</th>\n",
              "      <td>0.74</td>\n",
              "      <td>0.74</td>\n",
              "      <td>None</td>\n",
              "      <td>0.74</td>\n",
              "      <td>0.48</td>\n",
              "      <td>0.10</td>\n",
              "    </tr>\n",
              "    <tr>\n",
              "      <th>LinearSVC</th>\n",
              "      <td>0.74</td>\n",
              "      <td>0.74</td>\n",
              "      <td>None</td>\n",
              "      <td>0.74</td>\n",
              "      <td>0.47</td>\n",
              "      <td>0.31</td>\n",
              "    </tr>\n",
              "    <tr>\n",
              "      <th>LinearDiscriminantAnalysis</th>\n",
              "      <td>0.73</td>\n",
              "      <td>0.74</td>\n",
              "      <td>None</td>\n",
              "      <td>0.73</td>\n",
              "      <td>0.47</td>\n",
              "      <td>0.09</td>\n",
              "    </tr>\n",
              "    <tr>\n",
              "      <th>LogisticRegression</th>\n",
              "      <td>0.73</td>\n",
              "      <td>0.73</td>\n",
              "      <td>None</td>\n",
              "      <td>0.73</td>\n",
              "      <td>0.47</td>\n",
              "      <td>0.09</td>\n",
              "    </tr>\n",
              "    <tr>\n",
              "      <th>CalibratedClassifierCV</th>\n",
              "      <td>0.73</td>\n",
              "      <td>0.73</td>\n",
              "      <td>None</td>\n",
              "      <td>0.73</td>\n",
              "      <td>0.46</td>\n",
              "      <td>0.96</td>\n",
              "    </tr>\n",
              "    <tr>\n",
              "      <th>NearestCentroid</th>\n",
              "      <td>0.72</td>\n",
              "      <td>0.72</td>\n",
              "      <td>None</td>\n",
              "      <td>0.72</td>\n",
              "      <td>0.45</td>\n",
              "      <td>0.06</td>\n",
              "    </tr>\n",
              "    <tr>\n",
              "      <th>GaussianNB</th>\n",
              "      <td>0.71</td>\n",
              "      <td>0.71</td>\n",
              "      <td>None</td>\n",
              "      <td>0.71</td>\n",
              "      <td>0.43</td>\n",
              "      <td>0.04</td>\n",
              "    </tr>\n",
              "    <tr>\n",
              "      <th>BernoulliNB</th>\n",
              "      <td>0.71</td>\n",
              "      <td>0.71</td>\n",
              "      <td>None</td>\n",
              "      <td>0.71</td>\n",
              "      <td>0.42</td>\n",
              "      <td>0.06</td>\n",
              "    </tr>\n",
              "    <tr>\n",
              "      <th>SGDClassifier</th>\n",
              "      <td>0.67</td>\n",
              "      <td>0.66</td>\n",
              "      <td>None</td>\n",
              "      <td>0.66</td>\n",
              "      <td>0.33</td>\n",
              "      <td>0.09</td>\n",
              "    </tr>\n",
              "    <tr>\n",
              "      <th>Perceptron</th>\n",
              "      <td>0.65</td>\n",
              "      <td>0.65</td>\n",
              "      <td>None</td>\n",
              "      <td>0.65</td>\n",
              "      <td>0.29</td>\n",
              "      <td>0.08</td>\n",
              "    </tr>\n",
              "    <tr>\n",
              "      <th>PassiveAggressiveClassifier</th>\n",
              "      <td>0.64</td>\n",
              "      <td>0.64</td>\n",
              "      <td>None</td>\n",
              "      <td>0.63</td>\n",
              "      <td>0.30</td>\n",
              "      <td>0.07</td>\n",
              "    </tr>\n",
              "    <tr>\n",
              "      <th>DummyClassifier</th>\n",
              "      <td>0.49</td>\n",
              "      <td>0.49</td>\n",
              "      <td>None</td>\n",
              "      <td>0.49</td>\n",
              "      <td>-0.01</td>\n",
              "      <td>0.05</td>\n",
              "    </tr>\n",
              "  </tbody>\n",
              "</table>\n",
              "</div>"
            ],
            "text/plain": [
              "                               Accuracy  ...  Time Taken\n",
              "Model                                    ...            \n",
              "RandomForestClassifier             0.93  ...        0.59\n",
              "LabelSpreading                     0.93  ...        0.68\n",
              "LabelPropagation                   0.93  ...        0.58\n",
              "DecisionTreeClassifier             0.93  ...        0.07\n",
              "ExtraTreeClassifier                0.93  ...        0.05\n",
              "ExtraTreesClassifier               0.93  ...        0.41\n",
              "LGBMClassifier                     0.92  ...        0.21\n",
              "BaggingClassifier                  0.92  ...        0.20\n",
              "NuSVC                              0.86  ...        0.51\n",
              "SVC                                0.82  ...        0.44\n",
              "KNeighborsClassifier               0.82  ...        0.29\n",
              "XGBClassifier                      0.80  ...        0.22\n",
              "AdaBoostClassifier                 0.76  ...        0.34\n",
              "QuadraticDiscriminantAnalysis      0.75  ...        0.08\n",
              "RidgeClassifier                    0.74  ...        0.08\n",
              "RidgeClassifierCV                  0.74  ...        0.10\n",
              "LinearSVC                          0.74  ...        0.31\n",
              "LinearDiscriminantAnalysis         0.73  ...        0.09\n",
              "LogisticRegression                 0.73  ...        0.09\n",
              "CalibratedClassifierCV             0.73  ...        0.96\n",
              "NearestCentroid                    0.72  ...        0.06\n",
              "GaussianNB                         0.71  ...        0.04\n",
              "BernoulliNB                        0.71  ...        0.06\n",
              "SGDClassifier                      0.67  ...        0.09\n",
              "Perceptron                         0.65  ...        0.08\n",
              "PassiveAggressiveClassifier        0.64  ...        0.07\n",
              "DummyClassifier                    0.49  ...        0.05\n",
              "\n",
              "[27 rows x 6 columns]"
            ]
          },
          "metadata": {
            "tags": []
          },
          "execution_count": 32
        }
      ]
    },
    {
      "cell_type": "code",
      "metadata": {
        "colab": {
          "base_uri": "https://localhost:8080/",
          "height": 917
        },
        "id": "MFuuVXtQb8bi",
        "outputId": "c8d423dc-33af-4ef6-9593-a11cf891ce93"
      },
      "source": [
        "# Prints the model performance (Test set)\n",
        "models_test"
      ],
      "execution_count": null,
      "outputs": [
        {
          "output_type": "execute_result",
          "data": {
            "text/html": [
              "<div>\n",
              "<style scoped>\n",
              "    .dataframe tbody tr th:only-of-type {\n",
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              "\n",
              "    .dataframe tbody tr th {\n",
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              "    }\n",
              "\n",
              "    .dataframe thead th {\n",
              "        text-align: right;\n",
              "    }\n",
              "</style>\n",
              "<table border=\"1\" class=\"dataframe\">\n",
              "  <thead>\n",
              "    <tr style=\"text-align: right;\">\n",
              "      <th></th>\n",
              "      <th>Accuracy</th>\n",
              "      <th>Balanced Accuracy</th>\n",
              "      <th>ROC AUC</th>\n",
              "      <th>F1 Score</th>\n",
              "      <th>matthews_corrcoef</th>\n",
              "      <th>Time Taken</th>\n",
              "    </tr>\n",
              "    <tr>\n",
              "      <th>Model</th>\n",
              "      <th></th>\n",
              "      <th></th>\n",
              "      <th></th>\n",
              "      <th></th>\n",
              "      <th></th>\n",
              "      <th></th>\n",
              "    </tr>\n",
              "  </thead>\n",
              "  <tbody>\n",
              "    <tr>\n",
              "      <th>NuSVC</th>\n",
              "      <td>0.75</td>\n",
              "      <td>0.76</td>\n",
              "      <td>None</td>\n",
              "      <td>0.75</td>\n",
              "      <td>0.52</td>\n",
              "      <td>0.38</td>\n",
              "    </tr>\n",
              "    <tr>\n",
              "      <th>SVC</th>\n",
              "      <td>0.75</td>\n",
              "      <td>0.75</td>\n",
              "      <td>None</td>\n",
              "      <td>0.75</td>\n",
              "      <td>0.50</td>\n",
              "      <td>0.32</td>\n",
              "    </tr>\n",
              "    <tr>\n",
              "      <th>XGBClassifier</th>\n",
              "      <td>0.73</td>\n",
              "      <td>0.73</td>\n",
              "      <td>None</td>\n",
              "      <td>0.73</td>\n",
              "      <td>0.47</td>\n",
              "      <td>0.19</td>\n",
              "    </tr>\n",
              "    <tr>\n",
              "      <th>KNeighborsClassifier</th>\n",
              "      <td>0.73</td>\n",
              "      <td>0.73</td>\n",
              "      <td>None</td>\n",
              "      <td>0.73</td>\n",
              "      <td>0.46</td>\n",
              "      <td>0.08</td>\n",
              "    </tr>\n",
              "    <tr>\n",
              "      <th>QuadraticDiscriminantAnalysis</th>\n",
              "      <td>0.72</td>\n",
              "      <td>0.72</td>\n",
              "      <td>None</td>\n",
              "      <td>0.72</td>\n",
              "      <td>0.44</td>\n",
              "      <td>0.04</td>\n",
              "    </tr>\n",
              "    <tr>\n",
              "      <th>AdaBoostClassifier</th>\n",
              "      <td>0.71</td>\n",
              "      <td>0.71</td>\n",
              "      <td>None</td>\n",
              "      <td>0.71</td>\n",
              "      <td>0.43</td>\n",
              "      <td>0.31</td>\n",
              "    </tr>\n",
              "    <tr>\n",
              "      <th>LogisticRegression</th>\n",
              "      <td>0.71</td>\n",
              "      <td>0.71</td>\n",
              "      <td>None</td>\n",
              "      <td>0.71</td>\n",
              "      <td>0.42</td>\n",
              "      <td>0.04</td>\n",
              "    </tr>\n",
              "    <tr>\n",
              "      <th>CalibratedClassifierCV</th>\n",
              "      <td>0.71</td>\n",
              "      <td>0.71</td>\n",
              "      <td>None</td>\n",
              "      <td>0.71</td>\n",
              "      <td>0.42</td>\n",
              "      <td>0.93</td>\n",
              "    </tr>\n",
              "    <tr>\n",
              "      <th>LGBMClassifier</th>\n",
              "      <td>0.71</td>\n",
              "      <td>0.71</td>\n",
              "      <td>None</td>\n",
              "      <td>0.71</td>\n",
              "      <td>0.42</td>\n",
              "      <td>0.17</td>\n",
              "    </tr>\n",
              "    <tr>\n",
              "      <th>LinearSVC</th>\n",
              "      <td>0.70</td>\n",
              "      <td>0.71</td>\n",
              "      <td>None</td>\n",
              "      <td>0.70</td>\n",
              "      <td>0.41</td>\n",
              "      <td>0.29</td>\n",
              "    </tr>\n",
              "    <tr>\n",
              "      <th>LinearDiscriminantAnalysis</th>\n",
              "      <td>0.70</td>\n",
              "      <td>0.70</td>\n",
              "      <td>None</td>\n",
              "      <td>0.70</td>\n",
              "      <td>0.41</td>\n",
              "      <td>0.07</td>\n",
              "    </tr>\n",
              "    <tr>\n",
              "      <th>RidgeClassifierCV</th>\n",
              "      <td>0.70</td>\n",
              "      <td>0.70</td>\n",
              "      <td>None</td>\n",
              "      <td>0.70</td>\n",
              "      <td>0.41</td>\n",
              "      <td>0.07</td>\n",
              "    </tr>\n",
              "    <tr>\n",
              "      <th>RidgeClassifier</th>\n",
              "      <td>0.70</td>\n",
              "      <td>0.70</td>\n",
              "      <td>None</td>\n",
              "      <td>0.70</td>\n",
              "      <td>0.41</td>\n",
              "      <td>0.03</td>\n",
              "    </tr>\n",
              "    <tr>\n",
              "      <th>RandomForestClassifier</th>\n",
              "      <td>0.70</td>\n",
              "      <td>0.70</td>\n",
              "      <td>None</td>\n",
              "      <td>0.70</td>\n",
              "      <td>0.41</td>\n",
              "      <td>0.54</td>\n",
              "    </tr>\n",
              "    <tr>\n",
              "      <th>ExtraTreesClassifier</th>\n",
              "      <td>0.70</td>\n",
              "      <td>0.70</td>\n",
              "      <td>None</td>\n",
              "      <td>0.70</td>\n",
              "      <td>0.40</td>\n",
              "      <td>0.35</td>\n",
              "    </tr>\n",
              "    <tr>\n",
              "      <th>NearestCentroid</th>\n",
              "      <td>0.69</td>\n",
              "      <td>0.69</td>\n",
              "      <td>None</td>\n",
              "      <td>0.69</td>\n",
              "      <td>0.39</td>\n",
              "      <td>0.03</td>\n",
              "    </tr>\n",
              "    <tr>\n",
              "      <th>BernoulliNB</th>\n",
              "      <td>0.68</td>\n",
              "      <td>0.68</td>\n",
              "      <td>None</td>\n",
              "      <td>0.68</td>\n",
              "      <td>0.37</td>\n",
              "      <td>0.03</td>\n",
              "    </tr>\n",
              "    <tr>\n",
              "      <th>BaggingClassifier</th>\n",
              "      <td>0.67</td>\n",
              "      <td>0.67</td>\n",
              "      <td>None</td>\n",
              "      <td>0.67</td>\n",
              "      <td>0.35</td>\n",
              "      <td>0.17</td>\n",
              "    </tr>\n",
              "    <tr>\n",
              "      <th>GaussianNB</th>\n",
              "      <td>0.67</td>\n",
              "      <td>0.67</td>\n",
              "      <td>None</td>\n",
              "      <td>0.66</td>\n",
              "      <td>0.34</td>\n",
              "      <td>0.02</td>\n",
              "    </tr>\n",
              "    <tr>\n",
              "      <th>LabelSpreading</th>\n",
              "      <td>0.66</td>\n",
              "      <td>0.66</td>\n",
              "      <td>None</td>\n",
              "      <td>0.66</td>\n",
              "      <td>0.33</td>\n",
              "      <td>0.44</td>\n",
              "    </tr>\n",
              "    <tr>\n",
              "      <th>LabelPropagation</th>\n",
              "      <td>0.66</td>\n",
              "      <td>0.66</td>\n",
              "      <td>None</td>\n",
              "      <td>0.66</td>\n",
              "      <td>0.33</td>\n",
              "      <td>0.34</td>\n",
              "    </tr>\n",
              "    <tr>\n",
              "      <th>SGDClassifier</th>\n",
              "      <td>0.64</td>\n",
              "      <td>0.63</td>\n",
              "      <td>None</td>\n",
              "      <td>0.63</td>\n",
              "      <td>0.28</td>\n",
              "      <td>0.08</td>\n",
              "    </tr>\n",
              "    <tr>\n",
              "      <th>PassiveAggressiveClassifier</th>\n",
              "      <td>0.62</td>\n",
              "      <td>0.63</td>\n",
              "      <td>None</td>\n",
              "      <td>0.62</td>\n",
              "      <td>0.27</td>\n",
              "      <td>0.03</td>\n",
              "    </tr>\n",
              "    <tr>\n",
              "      <th>DecisionTreeClassifier</th>\n",
              "      <td>0.61</td>\n",
              "      <td>0.61</td>\n",
              "      <td>None</td>\n",
              "      <td>0.61</td>\n",
              "      <td>0.22</td>\n",
              "      <td>0.06</td>\n",
              "    </tr>\n",
              "    <tr>\n",
              "      <th>Perceptron</th>\n",
              "      <td>0.60</td>\n",
              "      <td>0.60</td>\n",
              "      <td>None</td>\n",
              "      <td>0.60</td>\n",
              "      <td>0.20</td>\n",
              "      <td>0.03</td>\n",
              "    </tr>\n",
              "    <tr>\n",
              "      <th>ExtraTreeClassifier</th>\n",
              "      <td>0.58</td>\n",
              "      <td>0.57</td>\n",
              "      <td>None</td>\n",
              "      <td>0.57</td>\n",
              "      <td>0.15</td>\n",
              "      <td>0.02</td>\n",
              "    </tr>\n",
              "    <tr>\n",
              "      <th>DummyClassifier</th>\n",
              "      <td>0.48</td>\n",
              "      <td>0.48</td>\n",
              "      <td>None</td>\n",
              "      <td>0.48</td>\n",
              "      <td>-0.04</td>\n",
              "      <td>0.03</td>\n",
              "    </tr>\n",
              "  </tbody>\n",
              "</table>\n",
              "</div>"
            ],
            "text/plain": [
              "                               Accuracy  ...  Time Taken\n",
              "Model                                    ...            \n",
              "NuSVC                              0.75  ...        0.38\n",
              "SVC                                0.75  ...        0.32\n",
              "XGBClassifier                      0.73  ...        0.19\n",
              "KNeighborsClassifier               0.73  ...        0.08\n",
              "QuadraticDiscriminantAnalysis      0.72  ...        0.04\n",
              "AdaBoostClassifier                 0.71  ...        0.31\n",
              "LogisticRegression                 0.71  ...        0.04\n",
              "CalibratedClassifierCV             0.71  ...        0.93\n",
              "LGBMClassifier                     0.71  ...        0.17\n",
              "LinearSVC                          0.70  ...        0.29\n",
              "LinearDiscriminantAnalysis         0.70  ...        0.07\n",
              "RidgeClassifierCV                  0.70  ...        0.07\n",
              "RidgeClassifier                    0.70  ...        0.03\n",
              "RandomForestClassifier             0.70  ...        0.54\n",
              "ExtraTreesClassifier               0.70  ...        0.35\n",
              "NearestCentroid                    0.69  ...        0.03\n",
              "BernoulliNB                        0.68  ...        0.03\n",
              "BaggingClassifier                  0.67  ...        0.17\n",
              "GaussianNB                         0.67  ...        0.02\n",
              "LabelSpreading                     0.66  ...        0.44\n",
              "LabelPropagation                   0.66  ...        0.34\n",
              "SGDClassifier                      0.64  ...        0.08\n",
              "PassiveAggressiveClassifier        0.62  ...        0.03\n",
              "DecisionTreeClassifier             0.61  ...        0.06\n",
              "Perceptron                         0.60  ...        0.03\n",
              "ExtraTreeClassifier                0.58  ...        0.02\n",
              "DummyClassifier                    0.48  ...        0.03\n",
              "\n",
              "[27 rows x 6 columns]"
            ]
          },
          "metadata": {
            "tags": []
          },
          "execution_count": 30
        }
      ]
    },
    {
      "cell_type": "code",
      "metadata": {
        "id": "n551PNfGJo9Q"
      },
      "source": [
        "y_test"
      ],
      "execution_count": null,
      "outputs": []
    },
    {
      "cell_type": "code",
      "metadata": {
        "id": "4ONmPLKdcKP4"
      },
      "source": [
        "# Plot of Accuracy\n",
        "import matplotlib.pyplot as plt\n",
        "import seaborn as sns\n",
        "\n",
        "plt.figure(figsize=(5, 10))\n",
        "sns.set_theme(style=\"whitegrid\")\n",
        "ax = sns.barplot(y=models_train.index, x=\"Accuracy\", data=models_train)\n",
        "ax.set(xlim=(0, 1))"
      ],
      "execution_count": null,
      "outputs": []
    },
    {
      "cell_type": "code",
      "metadata": {
        "id": "Bse08KSUW1FJ"
      },
      "source": [
        "# Plot of MCC\n",
        "import matplotlib.pyplot as plt\n",
        "import seaborn as sns\n",
        "\n",
        "plt.figure(figsize=(5, 10))\n",
        "sns.set_theme(style=\"whitegrid\")\n",
        "ax = sns.barplot(y=models_train.index, x=\"matthews_corrcoef\", data=models_train)\n",
        "ax.set(xlim=(0, 1))"
      ],
      "execution_count": null,
      "outputs": []
    },
    {
      "cell_type": "markdown",
      "metadata": {
        "id": "CvITCk5anJ96"
      },
      "source": [
        "---"
      ]
    },
    {
      "cell_type": "markdown",
      "metadata": {
        "id": "TOViHgf40APL"
      },
      "source": [
        "# **Random Forest**"
      ]
    },
    {
      "cell_type": "code",
      "metadata": {
        "id": "XdUSfIuzjBhR"
      },
      "source": [
        "# Build random forest model\n",
        "\n",
        "from sklearn.ensemble import RandomForestClassifier\n",
        "\n",
        "rf = RandomForestClassifier(n_estimators=500)\n",
        "\n",
        "rf.fit(X_train, y_train)"
      ],
      "execution_count": null,
      "outputs": []
    },
    {
      "cell_type": "markdown",
      "metadata": {
        "id": "ZK0-qLC2EfYh"
      },
      "source": [
        "### **Apply the model to make predictions**"
      ]
    },
    {
      "cell_type": "code",
      "metadata": {
        "id": "dKaPjMqPCAIn"
      },
      "source": [
        "y_train_pred = rf.predict(X_train)\n",
        "y_test_pred = rf.predict(X_test)"
      ],
      "execution_count": null,
      "outputs": []
    },
    {
      "cell_type": "markdown",
      "metadata": {
        "id": "kgQJf77qESEY"
      },
      "source": [
        "### **Model performance**"
      ]
    },
    {
      "cell_type": "code",
      "metadata": {
        "id": "UeyTuwVgJ04u"
      },
      "source": [
        "feature['class']"
      ],
      "execution_count": null,
      "outputs": []
    },
    {
      "cell_type": "code",
      "metadata": {
        "id": "FUnTxl_IdE4h"
      },
      "source": [
        "# Simplest and quickest way to obtain the model performance (Accuracy)\n",
        "rf.score(X_test,y_test)"
      ],
      "execution_count": null,
      "outputs": []
    },
    {
      "cell_type": "code",
      "metadata": {
        "id": "NM6v2tmNCOxI"
      },
      "source": [
        "# Accuracy\n",
        "from sklearn.metrics import accuracy_score\n",
        "\n",
        "accuracy_score(y_test, y_test_pred)"
      ],
      "execution_count": null,
      "outputs": []
    },
    {
      "cell_type": "code",
      "metadata": {
        "id": "WVM2CLaCerwd"
      },
      "source": [
        "# Matthew Correlation Coefficient\n",
        "from sklearn.metrics import matthews_corrcoef\n",
        "\n",
        "matthews_corrcoef(y_test, y_test_pred)"
      ],
      "execution_count": null,
      "outputs": []
    },
    {
      "cell_type": "code",
      "metadata": {
        "id": "9TYgRG7_Jl_y"
      },
      "source": [
        "# Confusion matrix\n",
        "from sklearn.metrics import confusion_matrix\n",
        "\n",
        "confusion_matrix(y_test, y_test_pred)"
      ],
      "execution_count": null,
      "outputs": []
    },
    {
      "cell_type": "code",
      "metadata": {
        "id": "Dy-_js-7E8Ag"
      },
      "source": [
        "# Classification report\n",
        "from sklearn.metrics import classification_report\n",
        "\n",
        "model_report = classification_report(y_train, y_train_pred, target_names=['positive','negative'])\n",
        "\n",
        "f = open('model_report.txt','w')\n",
        "f.writelines(model_report) \n",
        "f.close()"
      ],
      "execution_count": null,
      "outputs": []
    },
    {
      "cell_type": "code",
      "metadata": {
        "id": "TR625VQXH0WP"
      },
      "source": [
        "# ROC curve\n",
        "import matplotlib.pyplot as plt\n",
        "from sklearn.metrics import plot_roc_curve\n",
        "\n",
        "plot_roc_curve(rf, X_test, y_test)  \n",
        "plt.show()"
      ],
      "execution_count": null,
      "outputs": []
    },
    {
      "cell_type": "code",
      "metadata": {
        "id": "ImazzUEwLhjE"
      },
      "source": [
        "plot_roc_curve(rf, X_train, y_train)  \n",
        "plt.show()"
      ],
      "execution_count": null,
      "outputs": []
    },
    {
      "cell_type": "markdown",
      "metadata": {
        "id": "y-EaFk3SnLvc"
      },
      "source": [
        "### **Feature importance**"
      ]
    },
    {
      "cell_type": "code",
      "metadata": {
        "id": "ak50KFHNxmYo"
      },
      "source": [
        "# Display Dataframe of the dataset after feature selection (variance threshold)\n",
        "X2"
      ],
      "execution_count": null,
      "outputs": []
    },
    {
      "cell_type": "code",
      "metadata": {
        "id": "ZFdeHIRXuqo_"
      },
      "source": [
        "# Retrieve feature importance from the RF model\n",
        "importance = pd.Series(rf.feature_importances_, name = 'Gini')\n",
        "\n",
        "# Retrieve feature names\n",
        "feature_names = pd.Series(X2.columns, name = 'Feature')"
      ],
      "execution_count": null,
      "outputs": []
    },
    {
      "cell_type": "code",
      "metadata": {
        "id": "Cq4r6KsC_tb5"
      },
      "source": [
        "# Combine feature names and Gini values into a Dataframe\n",
        "df = pd.concat([feature_names, importance], axis=1, names=['Feature', 'Gini'])\n",
        "df"
      ],
      "execution_count": null,
      "outputs": []
    },
    {
      "cell_type": "code",
      "metadata": {
        "id": "xWHo58SIu1RU"
      },
      "source": [
        "# Plot of feature importance\n",
        "import matplotlib.pyplot as plt\n",
        "import seaborn as sns\n",
        "\n",
        "df_sorted = df.sort_values('Gini', ascending=False)[:20] # Sort by Gini in descending order; Showing only the top 20 results\n",
        "\n",
        "plt.figure(figsize=(5, 10))\n",
        "sns.set_theme(style=\"whitegrid\")\n",
        "ax = sns.barplot(x = 'Gini', y = 'Feature', data = df_sorted)\n",
        "plt.xlabel(\"Feature Importance\")"
      ],
      "execution_count": null,
      "outputs": []
    },
    {
      "cell_type": "markdown",
      "metadata": {
        "id": "TuPnx5mWeizm"
      },
      "source": [
        "---"
      ]
    }
  ]
}