Error in xml2::xml_find_all(sbgn.xml, ".//map")[[1]] : subscript out of bounds

[tangwei1129]

I tried to plot the reactome pathway R-HSA-212165, and I downloaded sbml file from https://reactome.org/content/detail/R-HSA-212165, and run the code as below, and gave me the error. how can I fix it? Thank you.

SBGNview.obj <- SBGNview(
gene.data = log2(datafoldchange),
gene.id.type = "SYMBOL",
sbgn.gene.id.type ="uniprot",
input.sbgn = "R-HSA-212165.sbml",
sbgn.dir = ".",
output.file = "quick.start",
output.formats = c("png")
)

Processing pathway: R-HSA-212165.sbml

R-HSA-212165.sbml looks like a local file. Using it directly.

Using user defined pathway SBGN-ML file!!

Generating mapping using Pathview

ID mapping not pre-generated
Mapping: SYMBOL, uniprot

'select()' returned 1:many mapping between keys and columns
[1] "Note: 190 of 5889 unique input IDs unmapped."
Changing data IDs
Finished changing data IDs
reading SBGN-ML file for arcs info: ./R-HSA-212165.sbml
Rendering SBGN graph
checking graph size and create margin for color panel
parsing ports
parsing glyphs
Error in xml2::xml_find_all(sbgn.xml, ".//map")[[1]] :
subscript out of bounds
In addition: Warning messages:
1: In max(x + w) : no non-missing arguments to max; returning -Inf
2: In max(y + h) : no non-missing arguments to max; returning -Inf
3: In min(y) : no non-missing arguments to min; returning Inf
4: In min(x) : no non-missing arguments to min; returning Inf