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Suggestion: multi-thread collapsePathways #84

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Horokhovskyi opened this issue Nov 2, 2020 · 1 comment
Open

Suggestion: multi-thread collapsePathways #84

Horokhovskyi opened this issue Nov 2, 2020 · 1 comment

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@Horokhovskyi
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Hello, I am an active user of the package. Sometimes running the collapsePathways function takes very long even with default number of permutations. Have you considered implementing a multi-thread version, for example via MulticoreParam ?

@assaron
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assaron commented Nov 3, 2020

Can you attach (or send me by e-mail) the example when it takes too long? I believe that adding the multicore support is not that trivial to be effective for this function. So I need an example to understand trade-offs better.

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