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.gitignore
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old_repo
.DS_Store
.idea/.name
.idea/ant.xml
.idea/artifacts/dgdweb_war_exploded.xml
.idea/compiler.xml
.idea/copyright/profiles_settings.xml
.idea/encodings.xml
.idea/libraries/lib.xml
.idea/libraries/lib1.xml
.idea/misc.xml
.idea/modules.xml
.idea/scopes/scope_settings.xml
.idea/uiDesigner.xml
.idea/vcs.xml
.idea/workspace.xml
classes/edu/chop/dgd/primer/AmpliconXomAnalyzer.class
classes/edu/chop/dgd/primer/PrimerCreateController.class
classes/edu/chop/dgd/primer/PrimerHomeController.class
classes/edu/chop/dgd/utils/Chromosome.class
classes/edu/chop/dgd/web/DGDHandlerInterceptor.class
classes/edu/chop/dgd/web/DisplayMapper.class
classes/edu/chop/dgd/web/HttpRequestFacade.class
dist/dgdweb_war_exploded/META-INF/MANIFEST.MF
dist/dgdweb_war_exploded/META-INF/context.xml/MANIFEST.MF
dist/dgdweb_war_exploded/WEB-INF/applicationContext.xml
dist/dgdweb_war_exploded/WEB-INF/classes/PrimerProcess.sh
dist/dgdweb_war_exploded/WEB-INF/classes/edu/chop/dgd/primer/AmpliconXomAnalyzer.class
dist/dgdweb_war_exploded/WEB-INF/classes/edu/chop/dgd/primer/PrimerCreateController.class
dist/dgdweb_war_exploded/WEB-INF/classes/edu/chop/dgd/primer/PrimerHomeController.class
dist/dgdweb_war_exploded/WEB-INF/classes/edu/chop/dgd/utils/Chromosome.class
dist/dgdweb_war_exploded/WEB-INF/classes/edu/chop/dgd/web/DGDHandlerInterceptor.class
dist/dgdweb_war_exploded/WEB-INF/classes/edu/chop/dgd/web/DisplayMapper.class
dist/dgdweb_war_exploded/WEB-INF/classes/edu/chop/dgd/web/HttpRequestFacade.class
dist/dgdweb_war_exploded/WEB-INF/lib/commons-collections-3.0.jar
dist/dgdweb_war_exploded/WEB-INF/lib/commons-dbcp.jar
dist/dgdweb_war_exploded/WEB-INF/lib/commons-logging-1.0.4.jar
dist/dgdweb_war_exploded/WEB-INF/lib/commons-net-2.2.jar
dist/dgdweb_war_exploded/WEB-INF/lib/commons-pool.jar
dist/dgdweb_war_exploded/WEB-INF/lib/dgdcore_1.1.3.jar
dist/dgdweb_war_exploded/WEB-INF/lib/dgdweb.jar
dist/dgdweb_war_exploded/WEB-INF/lib/hamcrest-core-1.3.jar
dist/dgdweb_war_exploded/WEB-INF/lib/httpclient-4.2.3.jar
dist/dgdweb_war_exploded/WEB-INF/lib/httpcore-4.2.2.jar
dist/dgdweb_war_exploded/WEB-INF/lib/jaxen-1.1.1.jar
dist/dgdweb_war_exploded/WEB-INF/lib/jsp-api.jar
dist/dgdweb_war_exploded/WEB-INF/lib/junit-4.11.jar
dist/dgdweb_war_exploded/WEB-INF/lib/mysql-connector-java-5.1.28-bin.jar
dist/dgdweb_war_exploded/WEB-INF/lib/servlet-api.jar
dist/dgdweb_war_exploded/WEB-INF/lib/spring-aop-4.0.0.RELEASE.jar
dist/dgdweb_war_exploded/WEB-INF/lib/spring-aspects-4.0.0.RELEASE.jar
dist/dgdweb_war_exploded/WEB-INF/lib/spring-beans-4.0.0.RELEASE.jar
dist/dgdweb_war_exploded/WEB-INF/lib/spring-context-4.0.0.RELEASE.jar
dist/dgdweb_war_exploded/WEB-INF/lib/spring-context-support-4.0.0.RELEASE.jar
dist/dgdweb_war_exploded/WEB-INF/lib/spring-core-4.0.0.RELEASE.jar
dist/dgdweb_war_exploded/WEB-INF/lib/spring-expression-4.0.0.RELEASE.jar
dist/dgdweb_war_exploded/WEB-INF/lib/spring-framework-bom-4.0.0.RELEASE.jar
dist/dgdweb_war_exploded/WEB-INF/lib/spring-instrument-4.0.0.RELEASE.jar
dist/dgdweb_war_exploded/WEB-INF/lib/spring-instrument-tomcat-4.0.0.RELEASE.jar
dist/dgdweb_war_exploded/WEB-INF/lib/spring-jdbc-4.0.0.RELEASE.jar
dist/dgdweb_war_exploded/WEB-INF/lib/spring-orm-4.0.0.RELEASE.jar
dist/dgdweb_war_exploded/WEB-INF/lib/spring-oxm-4.0.0.RELEASE.jar
dist/dgdweb_war_exploded/WEB-INF/lib/spring-test-4.0.0.RELEASE.jar
dist/dgdweb_war_exploded/WEB-INF/lib/spring-tx-4.0.0.RELEASE.jar
dist/dgdweb_war_exploded/WEB-INF/lib/spring-web-4.0.0.RELEASE.jar
dist/dgdweb_war_exploded/WEB-INF/lib/spring-webmvc-4.0.0.RELEASE.jar
dist/dgdweb_war_exploded/WEB-INF/lib/spring-webmvc-portlet-4.0.0.RELEASE.jar
dist/dgdweb_war_exploded/WEB-INF/lib/spring-websocket-4.0.0.RELEASE.jar
dist/dgdweb_war_exploded/WEB-INF/lib/xom-1.2.4.jar
dist/dgdweb_war_exploded/WEB-INF/log4j.properties
dist/dgdweb_war_exploded/WEB-INF/mvc-dispatcher-servlet.xml
dist/dgdweb_war_exploded/WEB-INF/mvc-dispatcher-servlet.xml.prod
dist/dgdweb_war_exploded/WEB-INF/pages/hello.jsp
dist/dgdweb_war_exploded/WEB-INF/pages/primer/home.jsp
dist/dgdweb_war_exploded/WEB-INF/pages/primer/primerReport.jsp
dist/dgdweb_war_exploded/WEB-INF/web.xml
dist/production/PrimerProcess.sh
dist/production/edu/chop/dgd/primer/AmpliconXomAnalyzer.class
dist/production/edu/chop/dgd/primer/PrimerCreateController.class
dist/production/edu/chop/dgd/primer/PrimerHomeController.class
dist/production/edu/chop/dgd/utils/Chromosome.class
dist/production/edu/chop/dgd/web/DGDHandlerInterceptor.class
dist/production/edu/chop/dgd/web/DisplayMapper.class
dist/production/edu/chop/dgd/web/HttpRequestFacade.class