diff --git a/Changes b/Changes index 4a86e78..1c4057d 100644 --- a/Changes +++ b/Changes @@ -1,25 +1,55 @@ Revision history for Bio::BPWrappers +1.12 2016-07-01: +---------------- + +bioaln: + + - Allow BLAST input in bioaln + +biotree: + - make biotree -m more efficent by avoiding pair-wise + OTU distances + - Add options: + --label-selected-nodes + --del-low-boot + --mid-point + --as-text + - change option --distance to --dist + +Bio::BPWrapper::SeqManipulations: + - Added support for IUPAC codes + - Added support for multimple sequence files + when performing restriction analyses + +Correct and expand documentation, add PDF reference + + 1.11 2016-07-01: +---------------- - Another attempt to mollify smokers 1.10 2016-07-01: +---------------- - Adjust testing for MSWin yet again - More doc improvements 1.08 2016-06-30: +---------------- - Canonicalize biotree -llt output - More doc updates 1.07 2016-06-30: +---------------- - More complete documentation - Address GNUMakefile testing issues on CPANTesters 1.06 2016-06-29: +---------------- - Canonicalize bioaln --avpid floating point values - Convert links from rocky to bioperl github namespace @@ -28,6 +58,7 @@ Revision history for Bio::BPWrappers - misc doc changes 1.05 2016-06-28: +---------------- - Try to addess OSX testing problems: test using long options @@ -41,6 +72,7 @@ Revision history for Bio::BPWrappers - force at least Perl 5.10 on CPAN install 1.03 2016-06-01: +---------------- - Make behavior the same across more Platforms: use a bundled Getopt::Long. This addresses @@ -48,9 +80,11 @@ Revision history for Bio::BPWrappers - Revise bioseq doc 1.01 2016-05-26: +---------------- - First CPAN release. 1.0 2015-02-10: +---------------- - First release. contains two utilities with tests: bioseq & bioaln.