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Update ADAM dependency version to 0.34.0.
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-9
lines changed

2 files changed

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-9
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pom.xml

Lines changed: 5 additions & 5 deletions
Original file line numberDiff line numberDiff line change
@@ -61,16 +61,16 @@
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</license>
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</licenses>
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<properties>
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<adam.version>0.33.0</adam.version>
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<adam.version>0.34.0</adam.version>
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<bdg-convert.version>0.10.0</bdg-convert.version>
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<biojava.version>5.4.0</biojava.version>
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<jdk.version>1.8</jdk.version>
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<junit.version>4.13.1</junit.version>
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<junit.version>4.13.2</junit.version>
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<maven.enforcer.jdk-version>[1.8,)</maven.enforcer.jdk-version>
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<project.build.sourceEncoding>UTF-8</project.build.sourceEncoding>
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<project.build.targetEncoding>UTF-8</project.build.targetEncoding>
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<scala-guice.version>4.2.6</scala-guice.version>
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<scala.version>2.12.8</scala.version>
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<scala.version>2.12.10</scala.version>
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<scala.version.prefix>2.12</scala.version.prefix>
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<slf4j.version>1.7.30</slf4j.version>
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<spark.version>3.0.2</spark.version>
@@ -332,7 +332,7 @@
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</dependency>
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<dependency>
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<groupId>org.bdgenomics.adam</groupId>
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<artifactId>adam-assembly-spark2_${scala.version.prefix}</artifactId>
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<artifactId>adam-assembly-spark3_${scala.version.prefix}</artifactId>
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<version>${adam.version}</version>
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</dependency>
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<dependency>
@@ -413,7 +413,7 @@
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</dependency>
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<dependency>
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<groupId>org.bdgenomics.adam</groupId>
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<artifactId>adam-assembly-spark2_${scala.version.prefix}</artifactId>
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<artifactId>adam-assembly-spark3_${scala.version.prefix}</artifactId>
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<scope>provided</scope>
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</dependency>
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<dependency>

src/main/scala/org/biojava/nbio/adam/BiojavaAdamContext.scala

Lines changed: 4 additions & 4 deletions
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@@ -35,13 +35,13 @@ import org.apache.hadoop.fs.Path
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import org.apache.hadoop.io.compress.CompressionCodecFactory
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import org.bdgenomics.adam.rdd.ADAMContext
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import org.bdgenomics.adam.ds.ADAMContext
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import org.bdgenomics.adam.rdd.feature.FeatureDataset
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import org.bdgenomics.adam.ds.feature.FeatureDataset
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import org.bdgenomics.adam.rdd.read.ReadDataset
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import org.bdgenomics.adam.ds.read.ReadDataset
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import org.bdgenomics.adam.rdd.sequence.SequenceDataset
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import org.bdgenomics.adam.ds.sequence.SequenceDataset
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import org.bdgenomics.convert.Converter
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import org.bdgenomics.convert.ConversionException

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