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lines changed Original file line number Diff line number Diff line change 6161 </license >
6262 </licenses >
6363 <properties >
64- <adam .version>0.33 .0</adam .version>
64+ <adam .version>0.34 .0</adam .version>
6565 <bdg-convert .version>0.10.0</bdg-convert .version>
6666 <biojava .version>5.4.0</biojava .version>
6767 <jdk .version>1.8</jdk .version>
68- <junit .version>4.13.1 </junit .version>
68+ <junit .version>4.13.2 </junit .version>
6969 <maven .enforcer.jdk-version>[1.8,)</maven .enforcer.jdk-version>
7070 <project .build.sourceEncoding>UTF-8</project .build.sourceEncoding>
7171 <project .build.targetEncoding>UTF-8</project .build.targetEncoding>
7272 <scala-guice .version>4.2.6</scala-guice .version>
73- <scala .version>2.12.8 </scala .version>
73+ <scala .version>2.12.10 </scala .version>
7474 <scala .version.prefix>2.12</scala .version.prefix>
7575 <slf4j .version>1.7.30</slf4j .version>
7676 <spark .version>3.0.2</spark .version>
332332 </dependency >
333333 <dependency >
334334 <groupId >org.bdgenomics.adam</groupId >
335- <artifactId >adam-assembly-spark2_ ${scala.version.prefix}</artifactId >
335+ <artifactId >adam-assembly-spark3_ ${scala.version.prefix}</artifactId >
336336 <version >${adam.version} </version >
337337 </dependency >
338338 <dependency >
413413 </dependency >
414414 <dependency >
415415 <groupId >org.bdgenomics.adam</groupId >
416- <artifactId >adam-assembly-spark2_ ${scala.version.prefix}</artifactId >
416+ <artifactId >adam-assembly-spark3_ ${scala.version.prefix}</artifactId >
417417 <scope >provided</scope >
418418 </dependency >
419419 <dependency >
Original file line number Diff line number Diff line change @@ -35,13 +35,13 @@ import org.apache.hadoop.fs.Path
3535
3636import org .apache .hadoop .io .compress .CompressionCodecFactory
3737
38- import org .bdgenomics .adam .rdd .ADAMContext
38+ import org .bdgenomics .adam .ds .ADAMContext
3939
40- import org .bdgenomics .adam .rdd .feature .FeatureDataset
40+ import org .bdgenomics .adam .ds .feature .FeatureDataset
4141
42- import org .bdgenomics .adam .rdd .read .ReadDataset
42+ import org .bdgenomics .adam .ds .read .ReadDataset
4343
44- import org .bdgenomics .adam .rdd .sequence .SequenceDataset
44+ import org .bdgenomics .adam .ds .sequence .SequenceDataset
4545
4646import org .bdgenomics .convert .Converter
4747import org .bdgenomics .convert .ConversionException
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