diff --git a/run.py b/run.py
index 8ae453a..3937fb1 100644
--- a/run.py
+++ b/run.py
@@ -111,7 +111,8 @@ def run(command, env={}):
                 "*","*","*.nii*"))
     else:
         file_paths=glob(os.path.join(args.bids_dir,"*","*.nii*"))+\
-                   glob(os.path.join(args.bids_dir,"*","*","*.nii*"))
+                   glob(os.path.join(args.bids_dir,"*","*","*.nii*"))+\
+                   glob(os.path.join(args.bids_dir,"*","*","*","*.nii*"))
 
     sub_list = extract_bids_data(file_paths)