No BAM output file from STAR alignReads and no error

[pauesquivias]

Hi,

I am running STAR --runMode alignReads and despite I have no error, it didn´t produce any BAM file.

Any clue??

Here is the Log.final.out

                             Started job on |       May 03 08:15:55
                         Started mapping on |       May 03 08:16:33
                                Finished on |       May 03 08:17:11
   Mapping speed, Million of reads per hour |       308.88

                      Number of input reads |       3260437
                  Average input read length |       48
                                UNIQUE READS:
               Uniquely mapped reads number |       482885
                    Uniquely mapped reads % |       14.81%
                      Average mapped length |       46.68
                   Number of splices: Total |       15710
        Number of splices: Annotated (sjdb) |       3736
                   Number of splices: GT/AG |       14047
                   Number of splices: GC/AG |       954
                   Number of splices: AT/AC |       0
           Number of splices: Non-canonical |       709
                  Mismatch rate per base, % |       3.35%
                     Deletion rate per base |       0.04%
                    Deletion average length |       1.93
                    Insertion rate per base |       0.02%
                   Insertion average length |       1.60
                         MULTI-MAPPING READS:
    Number of reads mapped to multiple loci |       1095162
         % of reads mapped to multiple loci |       33.59%
    Number of reads mapped to too many loci |       710126
         % of reads mapped to too many loci |       21.78%
                              UNMAPPED READS:

Number of reads unmapped: too many mismatches | 0
% of reads unmapped: too many mismatches | 0.00%
Number of reads unmapped: too short | 919980
% of reads unmapped: too short | 28.22%
Number of reads unmapped: other | 52284
% of reads unmapped: other | 1.60%
CHIMERIC READS:
Number of chimeric reads | 0
% of chimeric reads | 0.00%

Thanks!