From ebcb788c9a0430ddda1a06202d422bdfb8bd11bb Mon Sep 17 00:00:00 2001 From: YasinEl Date: Fri, 13 Jun 2025 12:49:35 -0700 Subject: [PATCH 1/3] using gnps2 chache for metadatafiles --- config.py | 3 ++- 1 file changed, 2 insertions(+), 1 deletion(-) diff --git a/config.py b/config.py index 818c1d5..e586f16 100644 --- a/config.py +++ b/config.py @@ -1 +1,2 @@ -PATH_TO_ORIGINAL_MAPPING_FILE = "/app/workflows/PublicDataset_ReDU_Metadata_Workflow/nf_output/merged_metadata.tsv" #global ReDU metadata +#PATH_TO_ORIGINAL_MAPPING_FILE = "/app/workflows/PublicDataset_ReDU_Metadata_Workflow/nf_output/merged_metadata.tsv" #global ReDU metadata +PATH_TO_ORIGINAL_MAPPING_FILE = "/home/yasin/projects/ReDU-MS2-GNPS2/workflows/PublicDataset_ReDU_Metadata_Workflow/nf_output/merged_metadata.tsv" \ No newline at end of file From 521d2d1fd5c1aba27a383959eb9c14fd2359700c Mon Sep 17 00:00:00 2001 From: YasinEl Date: Fri, 13 Jun 2025 12:52:02 -0700 Subject: [PATCH 2/3] undo --- config.py | 3 +-- 1 file changed, 1 insertion(+), 2 deletions(-) diff --git a/config.py b/config.py index e586f16..f9f73e0 100644 --- a/config.py +++ b/config.py @@ -1,2 +1 @@ -#PATH_TO_ORIGINAL_MAPPING_FILE = "/app/workflows/PublicDataset_ReDU_Metadata_Workflow/nf_output/merged_metadata.tsv" #global ReDU metadata -PATH_TO_ORIGINAL_MAPPING_FILE = "/home/yasin/projects/ReDU-MS2-GNPS2/workflows/PublicDataset_ReDU_Metadata_Workflow/nf_output/merged_metadata.tsv" \ No newline at end of file +PATH_TO_ORIGINAL_MAPPING_FILE = "/app/workflows/PublicDataset_ReDU_Metadata_Workflow/nf_output/merged_metadata.tsv" From 9c7689b7c25ed14d68c6d7f9eb98b711f0144530 Mon Sep 17 00:00:00 2001 From: YasinEl Date: Fri, 13 Jun 2025 13:03:09 -0700 Subject: [PATCH 3/3] Update submodule PublicDataset_ReDU_Metadata_Workflow to 4761c0c --- workflows/PublicDataset_ReDU_Metadata_Workflow | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/workflows/PublicDataset_ReDU_Metadata_Workflow b/workflows/PublicDataset_ReDU_Metadata_Workflow index 560f448..4761c0c 160000 --- a/workflows/PublicDataset_ReDU_Metadata_Workflow +++ b/workflows/PublicDataset_ReDU_Metadata_Workflow @@ -1 +1 @@ -Subproject commit 560f44868f33f039a964985a2c6bfc36483e6d86 +Subproject commit 4761c0cf2099235513a13d684dd8c80fef38c721