[MolNetEnhancer] Expects a zip file

[Sam-Will]

I've been trying to use MolNetEnhancer on GNPS2 but it seems to fail as it expects a zip file

I tried the workflow with both a feature based and classical network gnps_id but both failed:
Feature_based_taskID: d2f4cabe47bb4299a35ac056e767fda5
Classical_task_ID: e33c34466bf64730a4a4d52cd43b9738

Error message below:

Thanks for all the hard work!

[04/f2d800] process > processData [100%] 1 of 1, failed: 1
Error executing process > 'processData'

Caused by:
  Process `processData` terminated with an error exit status (1)

Command executed:

  mkdir output_network
  python /app/workflows_user/molnetenhancer_nextflow_workflow/bin/molnetenhancer.py     b0f7e7442fbe4e6582a6ddd1bf520755     output_network     --nap None     --derep None     --varquest None     --ms2lda None

Command exit status:
  1

Command output:
  GNPS request success: False

Command error:
  Traceback (most recent call last):
    File "/app/workflows_user/molnetenhancer_nextflow_workflow/bin/molnetenhancer.py", line 75, in <module>
      main()
    File "/app/workflows_user/molnetenhancer_nextflow_workflow/bin/molnetenhancer.py", line 35, in main
      ms2lda_gnps_job_id=args.gnps_ms2lda_job, nap_job_id=args.nap)
    File "/app/workflows_user/molnetenhancer_nextflow_workflow/bin/molnetenhancer.py", line 46, in process
      GNPS_file = request_GNPS_file(GNPS_job_ID, output_directory) + '/'
    File "/app/workflows_user/molnetenhancer_nextflow_workflow/bin/chemClass2Network.py", line 30, in request_GNPS_file
      zf = ZipFile(BytesIO(result.content))
    File "/app/launchserver/env/conda_envs/conda_env-01940cd7e1114399b86401f527eecef5/lib/python3.7/zipfile.py", line 1258, in __init__
      self._RealGetContents()
    File "/app/launchserver/env/conda_envs/conda_env-01940cd7e1114399b86401f527eecef5/lib/python3.7/zipfile.py", line 1325, in _RealGetContents
      raise BadZipFile("File is not a zip file")
  zipfile.BadZipFile: File is not a zip file

Work dir:
  /data/nf_data/server/nf_work/d2f4cabe47bb4299a35ac056e767fda5/04/f2d80051dde5dd7cd6dddf7e2cb6a5

Tip: view the complete command output by changing to the process work dir and entering the command `cat .command.out`