Please make sure that the following files are present in the "inputs" folder:

1. flux_results.xlsx				
2. Bile_acids_Corrected_table.xlsx
3. MARS_species.csv
4. KNN_imputed_metabolon_data_3rdMarch.xlsx
5. metadata.csv
6. microbiome_abundances_and_taxonomy.csv
7. microbiome_annotations.csv