Scibot can't pull pmid/doi on bio-protocol.org

[anp055]

Scibot doesn't seem to pull page note on bio-protocol.org

https://bio-protocol.org/e2400#biaoti15399

Side note, Scibot can't seem to pull PMID if run directly on pubmed? I figure we won't need to run scibot on pubmed very often, but it's strange that it can't pull the info on the very same page.

https://www.ncbi.nlm.nih.gov/pubmed/28139828

[tgbugs]

In theory I can pull the doi out from bio-protocol using this pattern

<div class="float-left doclink" style="margin-right: 100px;">
     <span>DOI:</span>&nbsp;&nbsp;
     <a href="https://doi.org/10.21769/BioProtoc.2400">10.21769/BioProtoc.2400</a>
</div>

For pubmed I could use this to crawl, but it is sort of pointless, because you are already crawling the pubmed id. I could add a page note, but I actually don't think that crawling pubmed pages is the right thing to do at all. @bandrow thoughts?

<div class="resc">
<dl class="rprtid">
 <dt>PMID:</dt> <dd>28139828</dd> 
 <dt>DOI:</dt> <dd><a href="//doi.org/10.1002/cne.24179" ref="aid_type=doi" target="_blank">10.1002/cne.24179</a></dd> 
</dl>
</div>

[bandrow]

Crawling PubMed is not a good thing to do. It lives in our systems, so you just have to query our systems if you don't want to query PubMed itself.

…

On Fri, Sep 14, 2018 at 1:32 PM Tom Gillespie ***@***.***> wrote: In theory I can pull the doi out from bio-protocol using this pattern <div class="float-left doclink" style="margin-right: 100px;"> <span>DOI:</span>&nbsp;&nbsp; <a href="https://doi.org/10.21769/BioProtoc.2400">10.21769/BioProtoc.2400</a> </div> For pubmed I could use this to crawl, but it is sort of pointless, because you are already crawling the pubmed id. I could add a page note, but I actually don't think that crawling pubmed pages is the right thing to do at all. @bandrow <https://github.com/bandrow> thoughts? <div class="resc"> <dl class="rprtid"> <dt>PMID:</dt> <dd>28139828</dd> <dt>DOI:</dt> <dd><a href="//doi.org/10.1002/cne.24179" ref="aid_type=doi" target="_blank">10.1002/cne.24179</a></dd> </dl> </div> — You are receiving this because you were mentioned. Reply to this email directly, view it on GitHub <#26 (comment)>, or mute the thread <https://github.com/notifications/unsubscribe-auth/AFsrNcUnbd_aTTr7-1BXXIQT43540MJ7ks5ubBJvgaJpZM4Wp4gn> .

-- All key biological entities deserve an #RRID! orcid.org/0000-0002-5497-0243