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Refactor scripts starting with T/U/V/W characters
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‎tmalign.py renamed to ‎scripts/tmalign.py

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‎transformations.py renamed to ‎scripts/transformations.py

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‎uniprot_features.py renamed to ‎scripts/uniprot_features.py

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‎wfmesh.py renamed to ‎scripts/wfmesh.py

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