log_network_1.txt

:: Fetch protein network::
-- databases: [IntAct ToToRo]
-- ref-organism: #ppi_query.organism.Organism{:common-name nil, :taxon-id 6239, :scientific-name Caenorhabditis elegans}
-- proteins: [#ppi_query.protein.Protein{:organism #ppi_query.organism.Organism{:common-name nil, :taxon-id 6239, :scientific-name Caenorhabditis elegans}, :uniprotid Q18688} #ppi_query.protein.Protein{:organism #ppi_query.organism.Organism{:common-name nil, :taxon-id 6239, :scientific-name Caenorhabditis elegans}, :uniprotid Q20646}]
-- other-organisms: [#ppi_query.organism.Organism{:common-name Mouse, :taxon-id 10090, :scientific-name Mus musculus} #ppi_query.organism.Organism{:common-name Fission yeast, :taxon-id 284812, :scientific-name Schizosaccharomyces pombe (strain 972 / ATCC 24843)}]
/!\ Warning: No Psicquic client found for database ToToRo
== orthologs-direct-interactions finished. Fetched : 
=== Mus musculus : 1 orthologs and 18 interactions found.
=== Schizosaccharomyces pombe (strain 972 / ATCC 24843) : 1 orthologs and 0 interactions found.
== 31 direct interactions fetched
Mus musculus : 38 secondary interactions found.
Schizosaccharomyces pombe (strain 972 / ATCC 24843) : 0 secondary interactions found.
== 38 orthologs secondary interactions in total
== Orthologs interactions brought back to reference organism.
== 30 proteins to display in total
== 47 secondary interactions in reference organism
== 38 interactions to display in total
#########################################
###     END FETCH PROTEIN NETWORK     ###
#########################################
nodes
[{"label":"Q20646", "id":"Q20646"}, {"label":"P20792", "id":"P20792"},
 {"label":"Q20655", "id":"Q20655"}, {"label":"O76840", "id":"O76840"},
 {"label":"O17218", "id":"O17218"}, {"label":"P45897", "id":"P45897"},
 {"label":"O17972", "id":"O17972"}, {"label":"Q20308", "id":"Q20308"},
 {"label":"Q18688", "id":"Q18688"}, {"label":"P50488", "id":"P50488"},
 {"label":"G5EG62", "id":"G5EG62"}, {"label":"O02108", "id":"O02108"},
 {"label":"P02566", "id":"P02566"}, {"label":"P90978", "id":"P90978"},
 {"label":"Q03563", "id":"Q03563"}, {"label":"Q9UAQ6", "id":"Q9UAQ6"},
 {"label":"Q11184", "id":"Q11184"}, {"label":"G5EFL5", "id":"G5EFL5"},
 {"label":"Q20365", "id":"Q20365"}, {"label":"O17927", "id":"O17927"},
 {"label":"Q9XVV3", "id":"Q9XVV3"}, {"label":"Q9XWG3", "id":"Q9XWG3"},
 {"label":"Q9TVL3", "id":"Q9TVL3"}, {"label":"G5EBJ4", "id":"G5EBJ4"},
 {"label":"G5ECP0", "id":"G5ECP0"}, {"label":"Q7JP67", "id":"Q7JP67"},
 {"label":"Q20234", "id":"Q20234"}, {"label":"Q27535", "id":"Q27535"},
 {"label":"Q9GYS1", "id":"Q9GYS1"}]
edges
[{"from":"Q9TVL3",
  "to":"Q18688",
  "color":"orange",
  "label":"Q99J95 (1.0)<->P11499 (1.0)",
  "desc":"Mus musculus"},
 {"from":"O17972",
  "to":"G5EBJ4",
  "color":"orange",
  "label":"Q9QY53 (1.0)<->O89019 (1.0)",
  "desc":"Mus musculus"},
 {"from":"Q18688",
  "to":"Q20234",
  "color":"red",
  "label":"",
  "desc":"Caenorhabditis elegans"},
 {"from":"Q20365",
  "to":"Q18688",
  "color":"orange",
  "label":"O35963 (1.0)<->P11499 (1.0)",
  "desc":"Mus musculus"},
 {"from":"G5EG62",
  "to":"Q18688",
  "color":"red",
  "label":"",
  "desc":"Caenorhabditis elegans"},
 {"from":"Q18688",
  "to":"Q18688",
  "color":"red",
  "label":"",
  "desc":"Caenorhabditis elegans"},
 {"from":"P02566",
  "to":"G5EG62",
  "color":"red",
  "label":"",
  "desc":"Caenorhabditis elegans"},
 {"from":"G5ECP0",
  "to":"G5ECP0",
  "color":"orange",
  "label":"P59240 (1.0)<->P59240 (1.0)",
  "desc":"Mus musculus"},
 {"from":"Q18688",
  "to":"O02108",
  "color":"red",
  "label":"",
  "desc":"Caenorhabditis elegans"},
 {"from":"Q18688",
  "to":"Q9XWG3",
  "color":"red",
  "label":"",
  "desc":"Caenorhabditis elegans"},
 {"from":"Q18688",
  "to":"Q03563",
  "color":"red",
  "label":"",
  "desc":"Caenorhabditis elegans"},
 {"from":"P45897",
  "to":"Q18688",
  "color":"red",
  "label":"",
  "desc":"Caenorhabditis elegans"},
 {"from":"Q18688",
  "to":"O17927",
  "color":"red",
  "label":"",
  "desc":"Caenorhabditis elegans"},
 {"from":"Q9UAQ6",
  "to":"Q18688",
  "color":"orange",
  "label":"P62821 (1.0)<->P11499 (1.0)",
  "desc":"Mus musculus"},
 {"from":"O17972",
  "to":"G5ECP0",
  "color":"orange",
  "label":"Q9QY53 (1.0)<->P59240 (1.0)",
  "desc":"Mus musculus"},
 {"from":"Q18688",
  "to":"Q11184",
  "color":"red",
  "label":"",
  "desc":"Caenorhabditis elegans"},
 {"from":"Q18688",
  "to":"P50488",
  "color":"red",
  "label":"",
  "desc":"Caenorhabditis elegans"},
 {"from":"G5EBJ4",
  "to":"Q18688",
  "color":"orange",
  "label":"O89019 (1.0)<->P11499 (1.0)",
  "desc":"Mus musculus"},
 {"from":"G5EFL5",
  "to":"G5EFL5",
  "color":"red",
  "label":"",
  "desc":"Caenorhabditis elegans"},
 {"from":"G5EG62",
  "to":"G5EG62",
  "color":"red",
  "label":"",
  "desc":"Caenorhabditis elegans"},
 {"from":"Q20655",
  "to":"Q18688",
  "color":"orange",
  "label":"P63101 (1.0)<->P11499 (1.0)",
  "desc":"Mus musculus"},
 {"from":"Q18688",
  "to":"O17218",
  "color":"red",
  "label":"",
  "desc":"Caenorhabditis elegans"},
 {"from":"Q11184",
  "to":"Q11184",
  "color":"red",
  "label":"",
  "desc":"Caenorhabditis elegans"},
 {"from":"Q18688",
  "to":"P20792",
  "color":"red",
  "label":"",
  "desc":"Caenorhabditis elegans"},
 {"from":"Q18688",
  "to":"G5EFL5",
  "color":"red",
  "label":"",
  "desc":"Caenorhabditis elegans"},
 {"from":"Q18688",
  "to":"O76840",
  "color":"red",
  "label":"",
  "desc":"Caenorhabditis elegans"},
 {"from":"G5ECP0",
  "to":"Q18688",
  "color":"orange",
  "label":"P59240 (1.0)<->P11499 (1.0)",
  "desc":"Mus musculus"},
 {"from":"O17972",
  "to":"Q18688",
  "color":"orange",
  "label":"Q9QY53 (1.0)<->P11499 (1.0)",
  "desc":"Mus musculus"},
 {"from":"Q18688",
  "to":"P90978",
  "color":"red",
  "label":"",
  "desc":"Caenorhabditis elegans"},
 {"from":"Q18688",
  "to":"P02566",
  "color":"red",
  "label":"",
  "desc":"Caenorhabditis elegans"},
 {"from":"Q11184",
  "to":"Q20655",
  "color":"red",
  "label":"",
  "desc":"Caenorhabditis elegans"},
 {"from":"Q18688",
  "to":"Q20308",
  "color":"red",
  "label":"",
  "desc":"Caenorhabditis elegans"},
 {"from":"Q9GYS1",
  "to":"Q18688",
  "color":"orange",
  "label":"Q921E6 (1.0)<->P11499 (1.0)",
  "desc":"Mus musculus"},
 {"from":"Q18688",
  "to":"Q9XVV3",
  "color":"red",
  "label":"",
  "desc":"Caenorhabditis elegans"},
 {"from":"G5EFL5",
  "to":"Q9XWG3",
  "color":"red",
  "label":"",
  "desc":"Caenorhabditis elegans"},
 {"from":"Q18688",
  "to":"Q27535",
  "color":"red",
  "label":"",
  "desc":"Caenorhabditis elegans"},
 {"from":"O02108",
  "to":"Q9TVL3",
  "color":"red",
  "label":"",
  "desc":"Caenorhabditis elegans"},
 {"from":"Q7JP67",
  "to":"Q18688",
  "color":"orange",
  "label":"Q923S6 (1.0)<->P11499 (1.0)",
  "desc":"Mus musculus"}]
ppi-query.network-graph-test=>
[:proto-repl-code-execution-extension
 "proto-repl-charts"
 {:name "Psicquic interactions",
  :type "graph",
  :data {:nodes ({:label "Q20646", :id "Q20646"}
                 {:label "P20792", :id "P20792"}
                 {:label "Q20655", :id "Q20655"}
                 {:label "O76840", :id "O76840"}
                 {:label "O17218", :id "O17218"}
                 {:label "P45897", :id "P45897"}
                 {:label "O17972", :id "O17972"}
                 {:label "Q20308", :id "Q20308"}
                 {:label "Q18688", :id "Q18688"}
                 {:label "P50488", :id "P50488"}
                 {:label "G5EG62", :id "G5EG62"}
                 {:label "O02108", :id "O02108"}
                 {:label "P02566", :id "P02566"}
                 {:label "P90978", :id "P90978"}
                 {:label "Q03563", :id "Q03563"}
                 {:label "Q9UAQ6", :id "Q9UAQ6"}
                 {:label "Q11184", :id "Q11184"}
                 {:label "G5EFL5", :id "G5EFL5"}
                 {:label "Q20365", :id "Q20365"}
                 {:label "O17927", :id "O17927"}
                 {:label "Q9XVV3", :id "Q9XVV3"}
                 {:label "Q9XWG3", :id "Q9XWG3"}
                 {:label "Q9TVL3", :id "Q9TVL3"}
                 {:label "G5EBJ4", :id "G5EBJ4"}
                 {:label "G5ECP0", :id "G5ECP0"}
                 {:label "Q7JP67", :id "Q7JP67"}
                 {:label "Q20234", :id "Q20234"}
                 {:label "Q27535", :id "Q27535"}
                 {:label "Q9GYS1", :id "Q9GYS1"}),
         :options nil,
         :edges ({:desc "Mus musculus",
                  :color "orange",
                  :from "Q9TVL3",
                  :label "Q99J95 (1.0)<->P11499 (1.0)",
                  :to "Q18688"}
                 {:desc "Mus musculus",
                  :color "orange",
                  :from "O17972",
                  :label "Q9QY53 (1.0)<->O89019 (1.0)",
                  :to "G5EBJ4"}
                 {:desc "Caenorhabditis elegans",
                  :color "red",
                  :from "Q18688",
                  :label "",
                  :to "Q20234"}
                 {:desc "Mus musculus",
                  :color "orange",
                  :from "Q20365",
                  :label "O35963 (1.0)<->P11499 (1.0)",
                  :to "Q18688"}
                 {:desc "Caenorhabditis elegans",
                  :color "red",
                  :from "G5EG62",
                  :label "",
                  :to "Q18688"}
                 {:desc "Caenorhabditis elegans",
                  :color "red",
                  :from "Q18688",
                  :label "",
                  :to "Q18688"}
                 {:desc "Caenorhabditis elegans",
                  :color "red",
                  :from "P02566",
                  :label "",
                  :to "G5EG62"}
                 {:desc "Mus musculus",
                  :color "orange",
                  :from "G5ECP0",
                  :label "P59240 (1.0)<->P59240 (1.0)",
                  :to "G5ECP0"}
                 {:desc "Caenorhabditis elegans",
                  :color "red",
                  :from "Q18688",
                  :label "",
                  :to "O02108"}
                 {:desc "Caenorhabditis elegans",
                  :color "red",
                  :from "Q18688",
                  :label "",
                  :to "Q9XWG3"}
                 {:desc "Caenorhabditis elegans",
                  :color "red",
                  :from "Q18688",
                  :label "",
                  :to "Q03563"}
                 {:desc "Caenorhabditis elegans",
                  :color "red",
                  :from "P45897",
                  :label "",
                  :to "Q18688"}
                 {:desc "Caenorhabditis elegans",
                  :color "red",
                  :from "Q18688",
                  :label "",
                  :to "O17927"}
                 {:desc "Mus musculus",
                  :color "orange",
                  :from "Q9UAQ6",
                  :label "P62821 (1.0)<->P11499 (1.0)",
                  :to "Q18688"}
                 {:desc "Mus musculus",
                  :color "orange",
                  :from "O17972",
                  :label "Q9QY53 (1.0)<->P59240 (1.0)",
                  :to "G5ECP0"}
                 {:desc "Caenorhabditis elegans",
                  :color "red",
                  :from "Q18688",
                  :label "",
                  :to "Q11184"}
                 {:desc "Caenorhabditis elegans",
                  :color "red",
                  :from "Q18688",
                  :label "",
                  :to "P50488"}
                 {:desc "Mus musculus",
                  :color "orange",
                  :from "G5EBJ4",
                  :label "O89019 (1.0)<->P11499 (1.0)",
                  :to "Q18688"}
                 {:desc "Caenorhabditis elegans",
                  :color "red",
                  :from "G5EFL5",
                  :label "",
                  :to "G5EFL5"}
                 {:desc "Caenorhabditis elegans",
                  :color "red",
                  :from "G5EG62",
                  :label "",
                  :to "G5EG62"}
                 {:desc "Mus musculus",
                  :color "orange",
                  :from "Q20655",
                  :label "P63101 (1.0)<->P11499 (1.0)",
                  :to "Q18688"}
                 {:desc "Caenorhabditis elegans",
                  :color "red",
                  :from "Q18688",
                  :label "",
                  :to "O17218"}
                 {:desc "Caenorhabditis elegans",
                  :color "red",
                  :from "Q11184",
                  :label "",
                  :to "Q11184"}
                 {:desc "Caenorhabditis elegans",
                  :color "red",
                  :from "Q18688",
                  :label "",
                  :to "P20792"}
                 {:desc "Caenorhabditis elegans",
                  :color "red",
                  :from "Q18688",
                  :label "",
                  :to "G5EFL5"}
                 {:desc "Caenorhabditis elegans",
                  :color "red",
                  :from "Q18688",
                  :label "",
                  :to "O76840"}
                 {:desc "Mus musculus",
                  :color "orange",
                  :from "G5ECP0",
                  :label "P59240 (1.0)<->P11499 (1.0)",
                  :to "Q18688"}
                 {:desc "Mus musculus",
                  :color "orange",
                  :from "O17972",
                  :label "Q9QY53 (1.0)<->P11499 (1.0)",
                  :to "Q18688"}
                 {:desc "Caenorhabditis elegans",
                  :color "red",
                  :from "Q18688",
                  :label "",
                  :to "P90978"}
                 {:desc "Caenorhabditis elegans",
                  :color "red",
                  :from "Q18688",
                  :label "",
                  :to "P02566"}
                 {:desc "Caenorhabditis elegans",
                  :color "red",
                  :from "Q11184",
                  :label "",
                  :to "Q20655"}
                 {:desc "Caenorhabditis elegans",
                  :color "red",
                  :from "Q18688",
                  :label "",
                  :to "Q20308"}
                 {:desc "Mus musculus",
                  :color "orange",
                  :from "Q9GYS1",
                  :label "Q921E6 (1.0)<->P11499 (1.0)",
                  :to "Q18688"}
                 {:desc "Caenorhabditis elegans",
                  :color "red",
                  :from "Q18688",
                  :label "",
                  :to "Q9XVV3"}
                 {:desc "Caenorhabditis elegans",
                  :color "red",
                  :from "G5EFL5",
                  :label "",
                  :to "Q9XWG3"}
                 {:desc "Caenorhabditis elegans",
                  :color "red",
                  :from "Q18688",
                  :label "",
                  :to "Q27535"}
                 {:desc "Caenorhabditis elegans",
                  :color "red",
                  :from "O02108",
                  :label "",
                  :to "Q9TVL3"}
                 {:desc "Mus musculus",
                  :color "orange",
                  :from "Q7JP67",
                  :label "Q923S6 (1.0)<->P11499 (1.0)",
                  :to "Q18688"})}}]