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dockerpublish.yml
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180 lines (158 loc) · 5.74 KB
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name: build-and-publish
on:
release:
types: [published]
permissions:
contents: write # upload assets to the release
packages: write
id-token: write
env:
IMAGE_OWNER: openswath
IMAGE_NAME: openswath
REGISTRY: ghcr.io
OPENMS_TAG: 3.4.1
MAKE_JOBS: 8
PYPROPHET_VERSION: 3.0.2
EASYPQP_VERSION: 0.1.53
jobs:
docker:
runs-on: ubuntu-latest
outputs:
tag_sha: ${{ steps.meta.outputs.TAG_SHA }}
tag_release: ${{ steps.meta.outputs.TAG_RELEASE }}
tag_latest: ${{ steps.meta.outputs.TAG_LATEST }}
joined_tags: ${{ steps.tags.outputs.JOINED_TAGS }}
steps:
- uses: actions/checkout@v4
- name: Compute tags
id: meta
run: |
SHORT_SHA="${GITHUB_SHA::7}"
{
echo "TAG_SHA=sha-${SHORT_SHA}"
echo "TAG_RELEASE=${GITHUB_REF_NAME}" # e.g. v0.3.0
if [ "${{ github.event.release.prerelease }}" = "false" ]; then
echo "TAG_LATEST=latest"
else
echo "TAG_LATEST="
fi
} >> "$GITHUB_OUTPUT"
- name: Build tag list (avoid empty lines)
id: tags
run: |
T1="${{ env.REGISTRY }}/${{ env.IMAGE_OWNER }}/${{ env.IMAGE_NAME }}:${{ steps.meta.outputs.TAG_SHA }}"
T2="${{ env.REGISTRY }}/${{ env.IMAGE_OWNER }}/${{ env.IMAGE_NAME }}:${{ steps.meta.outputs.TAG_RELEASE }}"
TAGS="$T1,$T2"
if [ -n "${{ steps.meta.outputs.TAG_LATEST }}" ]; then
T3="${{ env.REGISTRY }}/${{ env.IMAGE_OWNER }}/${{ env.IMAGE_NAME }}:${{ steps.meta.outputs.TAG_LATEST }}"
TAGS="$TAGS,$T3"
fi
echo "JOINED_TAGS=$TAGS" >> "$GITHUB_OUTPUT"
- name: Login to GHCR
uses: docker/login-action@v3
with:
registry: ${{ env.REGISTRY }}
username: ${{ github.actor }}
password: ${{ secrets.GITHUB_TOKEN }}
- name: Set up Buildx
uses: docker/setup-buildx-action@v3
- name: Build and push
uses: docker/build-push-action@v6
with:
context: .
push: true
# pass a CSV list to avoid empty tag entries
tags: ${{ steps.tags.outputs.JOINED_TAGS }}
build-args: |
OPENMS_TAG=${{ env.OPENMS_TAG }}
MAKE_JOBS=${{ env.MAKE_JOBS }}
PYPROPHET_VERSION=${{ env.PYPROPHET_VERSION }}
EASYPQP_VERSION=${{ env.EASYPQP_VERSION }}
ARYCAL_URL=${{ vars.ARYCAL_URL }}
SAGE_URL=${{ vars.SAGE_URL }}
singularity:
runs-on: ubuntu-latest
needs: docker
env:
REGISTRY: ghcr.io
IMAGE_OWNER: openswath
IMAGE_NAME: openswath
TAG_RELEASE: ${{ needs.docker.outputs.tag_release }}
TAG_LATEST: ${{ needs.docker.outputs.tag_latest }}
steps:
- uses: actions/checkout@v4
- name: Set up Apptainer
uses: eWaterCycle/setup-apptainer@v2
with:
apptainer-version: '1.3.4'
- name: Pull SIF for release tag
id: pull_release
run: |
SRC="docker://${{ env.REGISTRY }}/${{ env.IMAGE_OWNER }}/${{ env.IMAGE_NAME }}:${{ env.TAG_RELEASE }}"
SIF="openswath-${{ env.TAG_RELEASE }}.sif"
echo "SIF_RELEASE=${SIF}" >> "$GITHUB_ENV"
echo "Pulling ${SIF} from ${SRC}"
for i in {1..6}; do
if apptainer pull --force "${SIF}" "${SRC}"; then
break
fi
echo "Retry ${i}/6: waiting for image to be available..."
sleep 10
done
ls -lh "${SIF}"
- name: Upload SIF (release tag) as workflow artifact
uses: actions/upload-artifact@v4
with:
name: ${{ env.SIF_RELEASE }}
path: ${{ env.SIF_RELEASE }}
if-no-files-found: error
retention-days: 7
- name: Upload SIF (release tag) to GitHub Release
uses: softprops/action-gh-release@v2
with:
tag_name: ${{ env.TAG_RELEASE }}
files: ${{ env.SIF_RELEASE }}
- name: Pull SIF for latest (only if non-prerelease)
if: ${{ env.TAG_LATEST != '' }}
run: |
SRC="docker://${{ env.REGISTRY }}/${{ env.IMAGE_OWNER }}/${{ env.IMAGE_NAME }}:${{ env.TAG_LATEST }}"
SIF="openswath-${{ env.TAG_LATEST }}.sif"
echo "SIF_LATEST=${SIF}" >> "$GITHUB_ENV"
echo "Pulling ${SIF} from ${SRC}"
for i in {1..6}; do
if apptainer pull --force "${SIF}" "${SRC}"; then
break
fi
echo "Retry ${i}/6: waiting for image to be available..."
sleep 10
done
ls -lh "${SIF}"
- name: Upload SIF (latest) as workflow artifact
if: ${{ env.TAG_LATEST != '' }}
uses: actions/upload-artifact@v4
with:
name: ${{ env.SIF_LATEST }}
path: ${{ env.SIF_LATEST }}
if-no-files-found: error
retention-days: 7
- name: Set up ORAS
uses: oras-project/setup-oras@v1
- name: Login to GHCR (for ORAS)
run: |
echo "${{ secrets.GITHUB_TOKEN }}" | oras login ghcr.io \
--username "${{ github.actor }}" --password-stdin
- name: Push SIF to GHCR (release tag)
env:
REPO_SIF: ghcr.io/openswath/openswath-sif
run: |
oras push "${REPO_SIF}:${{ env.TAG_RELEASE }}" \
--artifact-type application/vnd.apptainer.sif \
"${{ env.SIF_RELEASE }}:application/vnd.apptainer.sif"
- name: Push SIF to GHCR (latest)
if: ${{ env.TAG_LATEST != '' }}
env:
REPO_SIF: ghcr.io/openswath/openswath-sif
run: |
oras push "${REPO_SIF}:${{ env.TAG_LATEST }}" \
--artifact-type application/vnd.apptainer.sif \
"${{ env.SIF_LATEST }}:application/vnd.apptainer.sif"