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[Feature]: Specify core namespace when creating the NamespaceCatalog #2064

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Closed
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stephprince opened this issue Apr 9, 2025 · 0 comments · Fixed by #2077
Closed
3 tasks done

[Feature]: Specify core namespace when creating the NamespaceCatalog #2064

stephprince opened this issue Apr 9, 2025 · 0 comments · Fixed by #2077
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category: enhancement improvements of code or code behavior priority: medium non-critical problem and/or affecting only a small set of NWB users topic: HDMF issues related to the use, depending on, or affecting HDMF

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What would you like to see added to PyNWB?

Once hdmf-dev/hdmf#1258 is merged and released, the pynwb init file should be updated here to include "core" as a core_namespace:

pynwb/src/pynwb/__init__.py

Line 90 in 1b613aa

__ns_catalog = NamespaceCatalog(NWBGroupSpec, NWBDatasetSpec, NWBNamespace)
.

Is your feature request related to a problem?

No response

What solution would you like?

Update the code to:

__ns_catalog = NamespaceCatalog(NWBGroupSpec, NWBDatasetSpec, NWBNamespace, core_namespace=CORE_NAMESPACE)

This update will limit the number of warnings about "ignoring cached namespace(s)" for core spec versions that should be back-compatible.

Do you have any interest in helping implement the feature?

Yes.

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@stephprince stephprince self-assigned this Apr 9, 2025
@stephprince stephprince added category: enhancement improvements of code or code behavior priority: medium non-critical problem and/or affecting only a small set of NWB users topic: HDMF issues related to the use, depending on, or affecting HDMF labels Apr 9, 2025
@stephprince stephprince mentioned this issue Apr 9, 2025
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@stephprince stephprince mentioned this issue May 7, 2025
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@rly rly closed this as completed in #2077 Jun 5, 2025
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category: enhancement improvements of code or code behavior priority: medium non-critical problem and/or affecting only a small set of NWB users topic: HDMF issues related to the use, depending on, or affecting HDMF
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Add core namespace to NamespaceCatalog NeurodataWithoutBorders/pynwb
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