From 5cda039f55338eb9c16ca2edf5aaee0763f0f8be Mon Sep 17 00:00:00 2001 From: Cory Martin Date: Thu, 20 Nov 2025 20:16:09 +0000 Subject: [PATCH 1/2] move pointer to workflow jobs --- test/aero/global-workflow/jjob_var_final.sh | 4 ++-- test/aero/global-workflow/jjob_var_init.sh | 4 ++-- test/aero/global-workflow/jjob_var_run.sh | 4 ++-- test/atm/global-workflow/jjob_ens_final.sh | 4 ++-- test/atm/global-workflow/jjob_ens_inc.sh | 4 ++-- test/atm/global-workflow/jjob_ens_init.sh | 4 ++-- test/atm/global-workflow/jjob_ens_init_split.sh | 4 ++-- test/atm/global-workflow/jjob_ens_letkf.sh | 4 ++-- test/atm/global-workflow/jjob_ens_obs.sh | 4 ++-- test/atm/global-workflow/jjob_ens_sol.sh | 4 ++-- test/atm/global-workflow/jjob_var_final.sh | 4 ++-- test/atm/global-workflow/jjob_var_inc.sh | 4 ++-- test/atm/global-workflow/jjob_var_init.sh | 4 ++-- test/atm/global-workflow/jjob_var_run.sh | 4 ++-- 14 files changed, 28 insertions(+), 28 deletions(-) diff --git a/test/aero/global-workflow/jjob_var_final.sh b/test/aero/global-workflow/jjob_var_final.sh index 3684d3aad..7ea51849c 100755 --- a/test/aero/global-workflow/jjob_var_final.sh +++ b/test/aero/global-workflow/jjob_var_final.sh @@ -53,7 +53,7 @@ nodes: 1 ntasks_per_node: 1 threads_per_task: 1 memory: ${memory} -command: ${HOMEgfs}/jobs/JGLOBAL_AERO_ANALYSIS_FINALIZE +command: ${HOMEgfs}/dev/jobs/JGLOBAL_AERO_ANALYSIS_FINALIZE filename: submit_${type}.sh EOF @@ -67,5 +67,5 @@ if [[ $SCHEDULER = 'slurm' ]]; then elif [[ $SCHEDULER = 'pbspro' ]]; then qsub -V -W block=true submit_${type}.sh else - ${HOMEgfs}/jobs/JGLOBAL_AERO_ANALYSIS_FINALIZE + ${HOMEgfs}/dev/jobs/JGLOBAL_AERO_ANALYSIS_FINALIZE fi diff --git a/test/aero/global-workflow/jjob_var_init.sh b/test/aero/global-workflow/jjob_var_init.sh index 6220f1c8e..1a1a7b4ae 100755 --- a/test/aero/global-workflow/jjob_var_init.sh +++ b/test/aero/global-workflow/jjob_var_init.sh @@ -96,7 +96,7 @@ nodes: 1 ntasks_per_node: 1 threads_per_task: 1 memory: ${memory} -command: ${HOMEgfs}/jobs/JGLOBAL_AERO_ANALYSIS_INITIALIZE +command: ${HOMEgfs}/dev/jobs/JGLOBAL_AERO_ANALYSIS_INITIALIZE filename: submit_${type}.sh EOF @@ -110,5 +110,5 @@ if [[ $SCHEDULER = 'slurm' ]]; then elif [[ $SCHEDULER = 'pbspro' ]]; then qsub -V -W block=true submit_${type}.sh else - ${HOMEgfs}/jobs/JGLOBAL_AERO_ANALYSIS_INITIALIZE + ${HOMEgfs}/dev/jobs/JGLOBAL_AERO_ANALYSIS_INITIALIZE fi diff --git a/test/aero/global-workflow/jjob_var_run.sh b/test/aero/global-workflow/jjob_var_run.sh index ff55dab3e..9fbf09267 100755 --- a/test/aero/global-workflow/jjob_var_run.sh +++ b/test/aero/global-workflow/jjob_var_run.sh @@ -55,7 +55,7 @@ nodes: 1 ntasks_per_node: 6 threads_per_task: 1 memory: ${memory} -command: ${HOMEgfs}/jobs/JGLOBAL_AERO_ANALYSIS_RUN +command: ${HOMEgfs}/dev/jobs/JGLOBAL_AERO_ANALYSIS_RUN filename: submit_${type}.sh EOF @@ -69,6 +69,6 @@ if [[ $SCHEDULER = 'slurm' ]]; then elif [[ $SCHEDULER = 'pbspro' ]]; then qsub -V -W block=true submit_${type}.sh else - ${HOMEgfs}/jobs/JGLOBAL_AERO_ANALYSIS_RUN + ${HOMEgfs}/dev/jobs/JGLOBAL_AERO_ANALYSIS_RUN fi diff --git a/test/atm/global-workflow/jjob_ens_final.sh b/test/atm/global-workflow/jjob_ens_final.sh index 7f3ee1071..21c4c37dd 100755 --- a/test/atm/global-workflow/jjob_ens_final.sh +++ b/test/atm/global-workflow/jjob_ens_final.sh @@ -57,7 +57,7 @@ nodes: 1 ntasks_per_node: 1 threads_per_task: 1 memory: ${memory} -command: ${HOMEgfs}/jobs/JGLOBAL_ATMENS_ANALYSIS_FINALIZE +command: ${HOMEgfs}/dev/jobs/JGLOBAL_ATMENS_ANALYSIS_FINALIZE filename: submit_${type}.sh EOF @@ -71,5 +71,5 @@ if [[ $SCHEDULER = 'slurm' ]]; then elif [[ $SCHEDULER = 'pbspro' ]]; then qsub -V -W block=true submit_${type}.sh else - ${HOMEgfs}/jobs/JGLOBAL_ATMENS_ANALYSIS_FINALIZE + ${HOMEgfs}/dev/jobs/JGLOBAL_ATMENS_ANALYSIS_FINALIZE fi diff --git a/test/atm/global-workflow/jjob_ens_inc.sh b/test/atm/global-workflow/jjob_ens_inc.sh index 59f917617..5bd56019f 100755 --- a/test/atm/global-workflow/jjob_ens_inc.sh +++ b/test/atm/global-workflow/jjob_ens_inc.sh @@ -57,7 +57,7 @@ nodes: 1 ntasks_per_node: 6 threads_per_task: 1 memory: ${memory} -command: ${HOMEgfs}/jobs/JGLOBAL_ATMENS_ANALYSIS_FV3_INCREMENT +command: ${HOMEgfs}/dev/jobs/JGLOBAL_ATMENS_ANALYSIS_FV3_INCREMENT filename: submit_${type}.sh EOF @@ -71,5 +71,5 @@ if [[ $SCHEDULER = 'slurm' ]]; then elif [[ $SCHEDULER = 'pbspro' ]]; then qsub -V -W block=true submit_${type}.sh else - ${HOMEgfs}/jobs/JGLOBAL_ATMENS_ANALYSIS_FV3_INCREMENT + ${HOMEgfs}/dev/jobs/JGLOBAL_ATMENS_ANALYSIS_FV3_INCREMENT fi diff --git a/test/atm/global-workflow/jjob_ens_init.sh b/test/atm/global-workflow/jjob_ens_init.sh index c9cf1cbf2..04732c8b0 100755 --- a/test/atm/global-workflow/jjob_ens_init.sh +++ b/test/atm/global-workflow/jjob_ens_init.sh @@ -121,7 +121,7 @@ nodes: 1 ntasks_per_node: 1 threads_per_task: 1 memory: ${memory} -command: ${HOMEgfs}/jobs/JGLOBAL_ATMENS_ANALYSIS_INITIALIZE +command: ${HOMEgfs}/dev/jobs/JGLOBAL_ATMENS_ANALYSIS_INITIALIZE filename: submit_${type}.sh EOF @@ -135,5 +135,5 @@ if [[ $SCHEDULER = 'slurm' ]]; then elif [[ $SCHEDULER = 'pbspro' ]]; then qsub -V -W block=true submit_${type}.sh else - ${HOMEgfs}/jobs/JGLOBAL_ATM_ANALYSIS_INITIALIZE + ${HOMEgfs}/dev/jobs/JGLOBAL_ATM_ANALYSIS_INITIALIZE fi diff --git a/test/atm/global-workflow/jjob_ens_init_split.sh b/test/atm/global-workflow/jjob_ens_init_split.sh index 3eb4260e8..7ffda9309 100755 --- a/test/atm/global-workflow/jjob_ens_init_split.sh +++ b/test/atm/global-workflow/jjob_ens_init_split.sh @@ -124,7 +124,7 @@ nodes: 1 ntasks_per_node: 1 threads_per_task: 1 memory: ${memory} -command: ${HOMEgfs}/jobs/JGLOBAL_ATMENS_ANALYSIS_INITIALIZE +command: ${HOMEgfs}/dev/jobs/JGLOBAL_ATMENS_ANALYSIS_INITIALIZE filename: submit_${type}.sh EOF @@ -138,5 +138,5 @@ if [[ $SCHEDULER = 'slurm' ]]; then elif [[ $SCHEDULER = 'pbspro' ]]; then qsub -V -W block=true submit_${type}.sh else - ${HOMEgfs}/jobs/JGLOBAL_ATM_ANALYSIS_INITIALIZE + ${HOMEgfs}/dev/jobs/JGLOBAL_ATM_ANALYSIS_INITIALIZE fi diff --git a/test/atm/global-workflow/jjob_ens_letkf.sh b/test/atm/global-workflow/jjob_ens_letkf.sh index 7bc590670..094714d98 100755 --- a/test/atm/global-workflow/jjob_ens_letkf.sh +++ b/test/atm/global-workflow/jjob_ens_letkf.sh @@ -62,7 +62,7 @@ nodes: 1 ntasks_per_node: 6 threads_per_task: 1 memory: ${memory} -command: ${HOMEgfs}/jobs/JGLOBAL_ATMENS_ANALYSIS_LETKF +command: ${HOMEgfs}/dev/jobs/JGLOBAL_ATMENS_ANALYSIS_LETKF filename: submit_${type}.sh EOF @@ -76,5 +76,5 @@ if [[ $SCHEDULER = 'slurm' ]]; then elif [[ $SCHEDULER = 'pbspro' ]]; then qsub -V -W block=true submit_${type}.sh else - ${HOMEgfs}/jobs/JGLOBAL_ATMENS_ANALYSIS_LETKF + ${HOMEgfs}/dev/jobs/JGLOBAL_ATMENS_ANALYSIS_LETKF fi diff --git a/test/atm/global-workflow/jjob_ens_obs.sh b/test/atm/global-workflow/jjob_ens_obs.sh index 6b192caf3..da324acbf 100755 --- a/test/atm/global-workflow/jjob_ens_obs.sh +++ b/test/atm/global-workflow/jjob_ens_obs.sh @@ -62,7 +62,7 @@ nodes: 1 ntasks_per_node: 6 threads_per_task: 1 memory: ${memory} -command: ${HOMEgfs}/jobs/JGLOBAL_ATMENS_ANALYSIS_OBS +command: ${HOMEgfs}/dev/jobs/JGLOBAL_ATMENS_ANALYSIS_OBS filename: submit_${type}.sh EOF @@ -76,5 +76,5 @@ if [[ $SCHEDULER = 'slurm' ]]; then elif [[ $SCHEDULER = 'pbspro' ]]; then qsub -V -W block=true submit_${type}.sh else - ${HOMEgfs}/jobs/JGLOBAL_ATMENS_ANALYSIS_OBS + ${HOMEgfs}/dev/jobs/JGLOBAL_ATMENS_ANALYSIS_OBS fi diff --git a/test/atm/global-workflow/jjob_ens_sol.sh b/test/atm/global-workflow/jjob_ens_sol.sh index d8ba91d8a..964de9fc7 100755 --- a/test/atm/global-workflow/jjob_ens_sol.sh +++ b/test/atm/global-workflow/jjob_ens_sol.sh @@ -62,7 +62,7 @@ nodes: 1 ntasks_per_node: 6 threads_per_task: 1 memory: ${memory} -command: ${HOMEgfs}/jobs/JGLOBAL_ATMENS_ANALYSIS_SOL +command: ${HOMEgfs}/dev/jobs/JGLOBAL_ATMENS_ANALYSIS_SOL filename: submit_${type}.sh EOF @@ -76,5 +76,5 @@ if [[ $SCHEDULER = 'slurm' ]]; then elif [[ $SCHEDULER = 'pbspro' ]]; then qsub -V -W block=true submit_${type}.sh else - ${HOMEgfs}/jobs/JGLOBAL_ATMENS_ANALYSIS_SOL + ${HOMEgfs}/dev/jobs/JGLOBAL_ATMENS_ANALYSIS_SOL fi diff --git a/test/atm/global-workflow/jjob_var_final.sh b/test/atm/global-workflow/jjob_var_final.sh index bafc98e67..6ac5b193a 100755 --- a/test/atm/global-workflow/jjob_var_final.sh +++ b/test/atm/global-workflow/jjob_var_final.sh @@ -57,7 +57,7 @@ nodes: 1 ntasks_per_node: 1 threads_per_task: 1 memory: ${memory} -command: ${HOMEgfs}/jobs/JGLOBAL_ATM_ANALYSIS_FINALIZE +command: ${HOMEgfs}/dev/jobs/JGLOBAL_ATM_ANALYSIS_FINALIZE filename: submit_${type}.sh EOF @@ -71,5 +71,5 @@ if [[ $SCHEDULER = 'slurm' ]]; then elif [[ $SCHEDULER = 'pbspro' ]]; then qsub -V -W block=true submit_${type}.sh else - ${HOMEgfs}/jobs/JGLOBAL_ATM_ANALYSIS_FINALIZE + ${HOMEgfs}/dev/jobs/JGLOBAL_ATM_ANALYSIS_FINALIZE fi diff --git a/test/atm/global-workflow/jjob_var_inc.sh b/test/atm/global-workflow/jjob_var_inc.sh index 449ebd676..e9a5acb48 100755 --- a/test/atm/global-workflow/jjob_var_inc.sh +++ b/test/atm/global-workflow/jjob_var_inc.sh @@ -57,7 +57,7 @@ nodes: 1 ntasks_per_node: 6 threads_per_task: 1 memory: ${memory} -command: ${HOMEgfs}/jobs/JGLOBAL_ATM_ANALYSIS_FV3_INCREMENT +command: ${HOMEgfs}/dev/jobs/JGLOBAL_ATM_ANALYSIS_FV3_INCREMENT filename: submit_${type}.sh EOF @@ -71,5 +71,5 @@ if [[ $SCHEDULER = 'slurm' ]]; then elif [[ $SCHEDULER = 'pbspro' ]]; then qsub -V -W block=true submit_${type}.sh else - ${HOMEgfs}/jobs/JGLOBAL_ATM_ANALYSIS_FV3_INCREMENT + ${HOMEgfs}/dev/jobs/JGLOBAL_ATM_ANALYSIS_FV3_INCREMENT fi diff --git a/test/atm/global-workflow/jjob_var_init.sh b/test/atm/global-workflow/jjob_var_init.sh index 4c1032b18..57cde5219 100755 --- a/test/atm/global-workflow/jjob_var_init.sh +++ b/test/atm/global-workflow/jjob_var_init.sh @@ -130,7 +130,7 @@ nodes: 1 ntasks_per_node: 1 threads_per_task: 1 memory: ${memory} -command: ${HOMEgfs}/jobs/JGLOBAL_ATM_ANALYSIS_INITIALIZE +command: ${HOMEgfs}/dev/jobs/JGLOBAL_ATM_ANALYSIS_INITIALIZE filename: submit_${type}.sh EOF @@ -144,5 +144,5 @@ if [[ $SCHEDULER = 'slurm' ]]; then elif [[ $SCHEDULER = 'pbspro' ]]; then qsub -V -W block=true submit_${type}.sh else - ${HOMEgfs}/jobs/JGLOBAL_ATM_ANALYSIS_INITIALIZE + ${HOMEgfs}/dev/jobs/JGLOBAL_ATM_ANALYSIS_INITIALIZE fi diff --git a/test/atm/global-workflow/jjob_var_run.sh b/test/atm/global-workflow/jjob_var_run.sh index 45bb70fc3..114aab3e9 100755 --- a/test/atm/global-workflow/jjob_var_run.sh +++ b/test/atm/global-workflow/jjob_var_run.sh @@ -60,7 +60,7 @@ nodes: 1 ntasks_per_node: 6 threads_per_task: 1 memory: ${memory} -command: ${HOMEgfs}/jobs/JGLOBAL_ATM_ANALYSIS_VARIATIONAL +command: ${HOMEgfs}/dev/jobs/JGLOBAL_ATM_ANALYSIS_VARIATIONAL filename: submit_${type}.sh EOF @@ -74,5 +74,5 @@ if [[ $SCHEDULER = 'slurm' ]]; then elif [[ $SCHEDULER = 'pbspro' ]]; then qsub -V -W block=true submit_${type}.sh else - ${HOMEgfs}/jobs/JGLOBAL_ATM_ANALYSIS_VARIATIONAL + ${HOMEgfs}/dev/jobs/JGLOBAL_ATM_ANALYSIS_VARIATIONAL fi From ab1481c44ac1eb47c8ac601ee36fd643699b0a37 Mon Sep 17 00:00:00 2001 From: Cory Martin Date: Thu, 20 Nov 2025 15:28:11 -0500 Subject: [PATCH 2/2] Apply suggestions from code review Co-authored-by: Copilot <175728472+Copilot@users.noreply.github.com> --- test/atm/global-workflow/jjob_ens_init.sh | 2 +- test/atm/global-workflow/jjob_ens_init_split.sh | 2 +- 2 files changed, 2 insertions(+), 2 deletions(-) diff --git a/test/atm/global-workflow/jjob_ens_init.sh b/test/atm/global-workflow/jjob_ens_init.sh index 04732c8b0..8c0932339 100755 --- a/test/atm/global-workflow/jjob_ens_init.sh +++ b/test/atm/global-workflow/jjob_ens_init.sh @@ -135,5 +135,5 @@ if [[ $SCHEDULER = 'slurm' ]]; then elif [[ $SCHEDULER = 'pbspro' ]]; then qsub -V -W block=true submit_${type}.sh else - ${HOMEgfs}/dev/jobs/JGLOBAL_ATM_ANALYSIS_INITIALIZE + ${HOMEgfs}/dev/jobs/JGLOBAL_ATMENS_ANALYSIS_INITIALIZE fi diff --git a/test/atm/global-workflow/jjob_ens_init_split.sh b/test/atm/global-workflow/jjob_ens_init_split.sh index 7ffda9309..b3a22c80f 100755 --- a/test/atm/global-workflow/jjob_ens_init_split.sh +++ b/test/atm/global-workflow/jjob_ens_init_split.sh @@ -138,5 +138,5 @@ if [[ $SCHEDULER = 'slurm' ]]; then elif [[ $SCHEDULER = 'pbspro' ]]; then qsub -V -W block=true submit_${type}.sh else - ${HOMEgfs}/dev/jobs/JGLOBAL_ATM_ANALYSIS_INITIALIZE + ${HOMEgfs}/dev/jobs/JGLOBAL_ATMENS_ANALYSIS_INITIALIZE fi