|
| 1 | +# Search path for model and obs for JCB |
| 2 | +# ------------------------------------- |
| 3 | +algorithm_path: "{{PARMgdas}}/jcb-algorithms" |
| 4 | +app_path_algorithm: "{{PARMgdas}}/jcb-gdas/algorithm/soil" |
| 5 | +app_path_model: "{{PARMgdas}}/jcb-gdas/model/soil" |
| 6 | +app_path_observations: "{{PARMgdas}}/jcb-gdas/observations/soil" |
| 7 | +app_path_observation_chronicle: "{{PARMgdas}}/jcb-gdas/observation_chronicle/soil" |
| 8 | + |
| 9 | + |
| 10 | +# Places where we deviate from the generic file name of a yaml |
| 11 | +# ------------------------------------------------------------ |
| 12 | +final_increment_file: soil_final_increment_fms |
| 13 | +model_file: model_pseudo |
| 14 | +initial_condition_file: background # Initial conditions for 4D apps is background |
| 15 | +output_file: soil_output |
| 16 | + |
| 17 | +# Assimilation window |
| 18 | +# ------------------- |
| 19 | +window_begin: "{{ WINDOW_BEGIN | to_isotime }}" |
| 20 | +window_length: "{{ WINDOW_LENGTH }}" |
| 21 | +bound_to_include: begin |
| 22 | + |
| 23 | +# Default background time is for 3D applications |
| 24 | +{% set bkg_time_iso = current_cycle | to_isotime %} |
| 25 | +{% set bkg_time_fv3 = current_cycle | to_fv3time %} |
| 26 | +{% set bkg_time_julian = current_cycle | to_julian %} |
| 27 | +soil_background_time_iso: "{{ bkg_time_iso }}" |
| 28 | +soil_background_time_fv3: "{{ bkg_time_fv3 }}" |
| 29 | +soil_background_time_julian: "{{ bkg_time_julian }}" |
| 30 | +soil_increment_time_iso: "{{ bkg_time_iso }}" |
| 31 | +soil_increment_time_fv3: "{{ bkg_time_fv3 }}" |
| 32 | + |
| 33 | + |
| 34 | +# Analysis standard things |
| 35 | +# ------------------------ |
| 36 | +analysis_variables: [soilMoistureVolumetric] |
| 37 | +minimizer: DRPCG |
| 38 | +final_diagnostics_departures: anlmob |
| 39 | +final_prints_frequency: PT3H |
| 40 | +cost_type: 3D-Var |
| 41 | +number_of_outer_loops: 1 |
| 42 | + |
| 43 | +# Model things |
| 44 | +# ------------ |
| 45 | +# Geometry |
| 46 | +soil_layout_x: {{ layout_x | default(1, true) }} |
| 47 | +soil_layout_y: {{ layout_y | default(1, true) }} |
| 48 | +soil_npx_ges: {{ npx_ges | default(49, true) }} |
| 49 | +soil_npy_ges: {{ npy_ges | default(49, true) }} |
| 50 | +soil_npz_ges: {{ npz_ges | default(127, true) }} |
| 51 | +soil_npx_anl: {{ npx_ges | default(49, true) }} |
| 52 | +soil_npy_anl: {{ npy_ges | default(49, true) }} |
| 53 | +soil_npz_anl: {{ npz_ges | default(127, true) }} |
| 54 | + |
| 55 | +soil_variational_history_prefix: "{{ GPREFIX }}" |
| 56 | + |
| 57 | +soil_fv3jedi_files_path: ./fv3jedi # Ideally this would be {{DATA}}/fv3jedi but FMS |
| 58 | +soil_orog_files_path: "{{ soil_bkg_path }}" |
| 59 | +soil_orog_prefix: "{{ CASE }}.mx{{ OCNRES }}" |
| 60 | + |
| 61 | +# Background |
| 62 | +soil_background_path: {{ soil_bkg_path }} |
| 63 | +background_ensemble_path: ./ens/mem%mem% |
| 64 | + |
| 65 | +# Background error |
| 66 | +soil_bump_data_directory: "{{ DATA }}/berror" |
| 67 | +number_ensemble_members: {{ NMEM_ENS | default(1, true) }} |
| 68 | + |
| 69 | +soil_background_error_file: "{{BERROR_YAML}}" |
| 70 | + |
| 71 | +# Forecasting |
| 72 | +soil_forecast_length: "{{ SNOW_WINDOW_LENGTH }}" |
| 73 | +soil_forecast_timestep: "{{ BKG_TSTEP }}" |
| 74 | + |
| 75 | + |
| 76 | +# Observation things |
| 77 | +# ------------------ |
| 78 | +observations: all_observations |
| 79 | + |
| 80 | +crtm_coefficient_path: "{{ DATA }}/crtm/" |
| 81 | + |
| 82 | +# Naming conventions for observational files |
| 83 | +soil_obsdataroot_path: "{{COMIN_OBS}}" |
| 84 | +soil_obsdatain_path: "{{DATA}}/obs" |
| 85 | +soil_obsdatain_prefix: "{{OPREFIX}}" |
| 86 | +soil_obsdatain_suffix: "" #.tm00.bufr_d" |
| 87 | +soil_obsdataout_path: "{{DATA}}/diags" |
| 88 | +soil_prepobs_path: "{{DATA}}/prep" |
| 89 | +soil_obsdataout_prefix: diag_ |
| 90 | +soil_obsdataout_suffix: "_{{ current_cycle | to_YMDH }}.nc" |
| 91 | + |
| 92 | +# Naming conventions for bias correction files |
| 93 | +soil_obsbiasin_path: "{{DATA}}/obs/" |
| 94 | +soil_obsbiasin_prefix: "{{GPREFIX}}" |
| 95 | +soil_obsbiasin_suffix: ".satbias.nc" |
| 96 | +soil_obstlapsein_prefix: "{{GPREFIX}}" |
| 97 | +soil_obstlapsein_suffix: ".tlapse.txt" |
| 98 | +soil_obsbiascovin_prefix: "{{GPREFIX}}" |
| 99 | +soil_obsbiascovin_suffix: ".satbias_cov.nc" |
| 100 | + |
| 101 | +soil_obsbiasout_path: "{{DATA}}/bc/" |
| 102 | +soil_obsbiasout_prefix: "{{APREFIX}}" |
| 103 | +soil_obsbiasout_suffix: ".satbias.nc" |
| 104 | +soil_obsbiascovout_prefix: "{{APREFIX}}" |
| 105 | +soil_obsbiascovout_suffix: ".satbias_cov.nc" |
| 106 | + |
| 107 | +# Ensemble mean things |
| 108 | +soil_number_ensemble_members: {{NMEM_ENS}} |
| 109 | + |
| 110 | +# Local Ensemble DA (LETKF) |
| 111 | +# ------------------------- |
| 112 | +local_ensemble_da_solver: Deterministic GETKF |
| 113 | + |
| 114 | +increment_variables: [ua,va,DZ,delp,t,ps,sphum,ice_wat,liq_wat,o3mr] |
| 115 | + |
| 116 | +# Veritcal localization for GETKF |
| 117 | +vl_fraction_of_retained_variance: 0.750 |
| 118 | +vl_lengthscale: 2.1 |
| 119 | +vl_lengthscale_units: logp |
| 120 | +inflation_rtps: 0.85 |
| 121 | +inflation_rtpp: 0.0 |
| 122 | +inflation_mult: 1.0 |
| 123 | + |
| 124 | +# Driver |
| 125 | +driver_update_obs_config_with_geometry_info: true |
| 126 | +driver_save_posterior_mean: false |
| 127 | +driver_save_posterior_ensemble: false |
| 128 | +driver_save_prior_mean: false |
| 129 | +driver_save_posterior_mean_increment: false |
| 130 | +driver_save_posterior_ensemble_increments: true |
| 131 | + |
| 132 | +# Diagnostics |
| 133 | +ensemble_increment_prefix: "./anl/mem%{member}%/soilinc." |
| 134 | +#posterior_output_gaussian: "./mem%{member}%/soilanl." |
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