From e0e6df8421f227bcf1060b18ef52a54993dd2065 Mon Sep 17 00:00:00 2001 From: Sam Gurr Date: Sat, 21 Dec 2024 20:24:38 -0500 Subject: [PATCH] parentage script and outputs BootPed --- .../Data/Popgen/Parentages/F3_parentage.csv | 90 +- .../parentage_sequoia/F0BF1O/F0BF1O_final.csv | 103 ++ .../parentage_sequoia/F0BF1O/F0BF1O_raw.csv | 671 +++++++++++ .../F0BF1O/F0BF1O_summary.csv | 529 +++++++++ .../F1BF2O/High/F1BF2O_High_final.csv | 34 + .../F1BF2O/High/F1BF2O_High_raw.csv | 461 ++++++++ .../F1BF2O/High/F1BF2O_High_summary.csv | 461 ++++++++ .../F1BF2O/Low/F1BF2O_Low_final.csv | 33 + .../F1BF2O/Low/F1BF2O_Low_raw.csv | 221 ++++ .../F1BF2O/Low/F1BF2O_Low_summary.csv | 221 ++++ .../F1BF2O/Moderate/F1BF2O_Mod_final.csv | 48 + .../F1BF2O/Moderate/F1BF2O_Mod_raw.csv | 291 +++++ .../F1BF2O/Moderate/F1BF2O_Mod_summary.csv | 291 +++++ RAnalysis/Scripts/Popgen/.Rhistory | 1002 ++++++++--------- RAnalysis/Scripts/Popgen/05_parentage.Rmd | 854 +++++++++++++- 15 files changed, 4709 insertions(+), 601 deletions(-) create mode 100644 RAnalysis/Output/Popgen/parentage_sequoia/F0BF1O/F0BF1O_final.csv create mode 100644 RAnalysis/Output/Popgen/parentage_sequoia/F0BF1O/F0BF1O_raw.csv create mode 100644 RAnalysis/Output/Popgen/parentage_sequoia/F0BF1O/F0BF1O_summary.csv create mode 100644 RAnalysis/Output/Popgen/parentage_sequoia/F1BF2O/High/F1BF2O_High_final.csv create mode 100644 RAnalysis/Output/Popgen/parentage_sequoia/F1BF2O/High/F1BF2O_High_raw.csv create mode 100644 RAnalysis/Output/Popgen/parentage_sequoia/F1BF2O/High/F1BF2O_High_summary.csv create mode 100644 RAnalysis/Output/Popgen/parentage_sequoia/F1BF2O/Low/F1BF2O_Low_final.csv create mode 100644 RAnalysis/Output/Popgen/parentage_sequoia/F1BF2O/Low/F1BF2O_Low_raw.csv create mode 100644 RAnalysis/Output/Popgen/parentage_sequoia/F1BF2O/Low/F1BF2O_Low_summary.csv create mode 100644 RAnalysis/Output/Popgen/parentage_sequoia/F1BF2O/Moderate/F1BF2O_Mod_final.csv create mode 100644 RAnalysis/Output/Popgen/parentage_sequoia/F1BF2O/Moderate/F1BF2O_Mod_raw.csv create mode 100644 RAnalysis/Output/Popgen/parentage_sequoia/F1BF2O/Moderate/F1BF2O_Mod_summary.csv diff --git a/RAnalysis/Data/Popgen/Parentages/F3_parentage.csv b/RAnalysis/Data/Popgen/Parentages/F3_parentage.csv index d1d88a2..0c47c56 100644 --- a/RAnalysis/Data/Popgen/Parentages/F3_parentage.csv +++ b/RAnalysis/Data/Popgen/Parentages/F3_parentage.csv @@ -1,46 +1,46 @@ Broodstock_ID,Treatment,vcf_ID_raw,ID,Batch_1,Batch_2,Batch_3,Batch_4,key,Ped -1,High,adapter_trim.F3-B1-pH7.bam,F3-B1-pH7,F,M,NA,NA,Pa,Both -2,High,adapter_trim.F3-B2-pH7.bam,F3-B2-pH7,F,M,NA,NA,Pa,Both -3,High,adapter_trim.F3-B3-pH7.bam,F3-B3-pH7,M,NA,NA,NA,Fa,Sire -4,High,adapter_trim.F3-B4-pH7.bam,F3-B4-pH7,M,F,NA,NA,Pa,Both -5,High,adapter_trim.F3-B5-pH7.bam,F3-B5-pH7,NA,NA,M,NA,Fa,Sire -6,High,adapter_trim.F3-B6-pH7.bam,F3-B6-pH7,NA,F,NA,NA,Mo,Dam -7,High,adapter_trim.F3-B7-pH7.bam,F3-B7-pH7,NA,NA,F,NA,Mo,Dam -8,High,adapter_trim.F3-B8-pH7.bam,F3-B8-pH7,NA,NA,NA,M,Fa,Sire -9,High,adapter_trim.F3-B9-pH7.bam,F3-B9-pH7,NA,F,NA,NA,Mo,Dam -10,High,adapter_trim.F3-B10-pH7.bam,F3-B10-pH7,F,NA,M,NA,Pa,Both -12,High,adapter_trim.F3-B12-pH7.bam,F3-B12-pH7,NA,NA,F,NA,Mo,Dam -15,High,adapter_trim.F3-B15-pH7.bam,F3-B15-pH7,NA,NA,NA,F,Mo,Dam -16,High,adapter_trim.F3-B16-pH7.bam,F3-B16-pH7,NA,NA,NA,F,Mo,Dam -18,High,adapter_trim.F3-B18-pH7.bam,F3-B18-pH7,NA,NA,F,NA,Mo,Dam -19,High,adapter_trim.F3-B19-pH7.bam,F3-B19-pH7,NA,NA,NA,F,Mo,Dam -25,High,adapter_trim.F3-B25-pH7.bam,F3-B25-pH7,NA,NA,NA,M,Fa,Sire -1,Moderate,adapter_trim.F3-B1-pH75.bam,F3-B1-pH75,NA,F,M,NA,Pa,Both -2,Moderate,adapter_trim.F3-B2-pH75.bam,F3-B2-pH75,F,NA,NA,NA,Mo,Dam -3,Moderate,adapter_trim.F3-B3-pH75.bam,F3-B3-pH75,NA,NA,NA,F,Mo,Dam -5,Moderate,adapter_trim.F3-B5-pH75.bam,F3-B5-pH75,NA,F,NA,NA,Mo,Dam -6,Moderate,adapter_trim.F3-B6-pH75.bam,F3-B6-pH75,NA,NA,F,NA,Mo,Dam -10,Moderate,adapter_trim.F3-B10-pH75.bam,F3-B10-pH75,NA,NA,M,NA,Fa,Sire -11,Moderate,adapter_trim.F3-B11-pH75.bam,F3-B11-pH75,F,M,NA,NA,Pa,Both -14,Moderate,adapter_trim.F3-B14-pH75.bam,F3-B14-pH75,M,F,NA,NA,Pa,Both -16,Moderate,adapter_trim.F3-B16-pH75.bam,F3-B16-pH75,M,NA,NA,NA,Fa,Sire -17,Moderate,adapter_trim.F3-B17-pH75.bam,F3-B17-pH75,NA,M,F,NA,Pa,Both -19,Moderate,adapter_trim.F3-B19-pH75.bam,F3-B19-pH75,F,NA,NA,M,Pa,Both -21,Moderate,adapter_trim.F3-B21-pH75.bam,F3-B21-pH75,NA,NA,F,NA,Mo,Dam -22,Moderate,adapter_trim.F3-B22-pH75.bam,F3-B22-pH75,NA,NA,NA,M,Fa,Sire -24,Moderate,adapter_trim.F3-B24-pH75.bam,F3-B24-pH75,NA,NA,NA,F,Mo,Dam -25,Moderate,adapter_trim.F3-B25-pH75.bam,F3-B25-pH75,NA,NA,NA,F,Mo,Dam -1,Low,adapter_trim.F3-B1-pH8.bam,F3-B1-pH8,F,NA,NA,NA,Mo,Dam -2,Low,adapter_trim.F3-B2-pH8.bam,F3-B2-pH8,F,NA,NA,M,Pa,Both -3,Low,adapter_trim.F3-B3-pH8.bam,F3-B3-pH8,NA,NA,NA,M,Pa,Both -5,Low,adapter_trim.F3-B5-pH8.bam,F3-B5-pH8,F,NA,NA,NA,Mo,Dam -6,Low,adapter_trim.F3-B6-pH8.bam,F3-B6-pH8,NA,M,NA,F,Pa,Both -7,Low,adapter_trim.F3-B7-pH8.bam,F3-B7-pH8,NA,M,F,NA,Pa,Both -8,Low,adapter_trim.F3-B8-pH8.bam,F3-B8-pH8,NA,NA,M,F,Pa,Both -10,Low,adapter_trim.F3-B10-pH8.bam,F3-B10-pH8,NA,F,NA,NA,Mo,Dam -11,Low,adapter_trim.F3-B11-pH8.bam,F3-B11-pH8,M,NA,NA,NA,Fa,Sire -12,Low,adapter_trim.F3-B12-pH8.bam,F3-B12-pH8,M,NA,F,NA,Pa,Both -13,Low,adapter_trim.F3-B13-pH8.bam,F3-B13-pH8,NA,NA,F,NA,Mo,Dam -15,Low,adapter_trim.F3-B15-pH8.bam,F3-B15-pH8,NA,F,NA,NA,Mo,Dam -16,Low,adapter_trim.F3-B16-pH8.bam,F3-B16-pH8,NA,NA,M,F,Pa,Both -23,Low,adapter_trim.F3-B23-pH8.bam,F3-B23-pH8,NA,F,NA,NA,Mo,Dam +1,High,adapter_trim.F2-B1-pH7.bam,F2-B1-pH7,F,M,NA,NA,Pa,Both +2,High,adapter_trim.F2-B2-pH7.bam,F2-B2-pH7,F,M,NA,NA,Pa,Both +3,High,adapter_trim.F2-B3-pH7.bam,F2-B3-pH7,M,NA,NA,NA,Fa,Sire +4,High,adapter_trim.F2-B4-pH7.bam,F2-B4-pH7,M,F,NA,NA,Pa,Both +5,High,adapter_trim.F2-B5-pH7.bam,F2-B5-pH7,NA,NA,M,NA,Fa,Sire +6,High,adapter_trim.F2-B6-pH7.bam,F2-B6-pH7,NA,F,NA,NA,Mo,Dam +7,High,adapter_trim.F2-B7-pH7.bam,F2-B7-pH7,NA,NA,F,NA,Mo,Dam +8,High,adapter_trim.F2-B8-pH7.bam,F2-B8-pH7,NA,NA,NA,M,Fa,Sire +9,High,adapter_trim.F2-B9-pH7.bam,F2-B9-pH7,NA,F,NA,NA,Mo,Dam +10,High,adapter_trim.F2-B10-pH7.bam,F2-B10-pH7,F,NA,M,NA,Pa,Both +12,High,adapter_trim.F2-B12-pH7.bam,F2-B12-pH7,NA,NA,F,NA,Mo,Dam +15,High,adapter_trim.F2-B15-pH7.bam,F2-B15-pH7,NA,NA,NA,F,Mo,Dam +16,High,adapter_trim.F2-B16-pH7.bam,F2-B16-pH7,NA,NA,NA,F,Mo,Dam +18,High,adapter_trim.F2-B18-pH7.bam,F2-B18-pH7,NA,NA,F,NA,Mo,Dam +19,High,adapter_trim.F2-B19-pH7.bam,F2-B19-pH7,NA,NA,NA,F,Mo,Dam +25,High,adapter_trim.F2-B25-pH7.bam,F2-B25-pH7,NA,NA,NA,M,Fa,Sire +1,Moderate,adapter_trim.F2-B1-pH75.bam,F2-B1-pH75,NA,F,M,NA,Pa,Both +2,Moderate,adapter_trim.F2-B2-pH75.bam,F2-B2-pH75,F,NA,NA,NA,Mo,Dam +3,Moderate,adapter_trim.F2-B3-pH75.bam,F2-B3-pH75,NA,NA,NA,F,Mo,Dam +5,Moderate,adapter_trim.F2-B5-pH75.bam,F2-B5-pH75,NA,F,NA,NA,Mo,Dam +6,Moderate,adapter_trim.F2-B6-pH75.bam,F2-B6-pH75,NA,NA,F,NA,Mo,Dam +10,Moderate,adapter_trim.F2-B10-pH75.bam,F2-B10-pH75,NA,NA,M,NA,Fa,Sire +11,Moderate,adapter_trim.F2-B11-pH75.bam,F2-B11-pH75,F,M,NA,NA,Pa,Both +14,Moderate,adapter_trim.F2-B14-pH75.bam,F2-B14-pH75,M,F,NA,NA,Pa,Both +16,Moderate,adapter_trim.F2-B16-pH75.bam,F2-B16-pH75,M,NA,NA,NA,Fa,Sire +17,Moderate,adapter_trim.F2-B17-pH75.bam,F2-B17-pH75,NA,M,F,NA,Pa,Both +19,Moderate,adapter_trim.F2-B19-pH75.bam,F2-B19-pH75,F,NA,NA,M,Pa,Both +21,Moderate,adapter_trim.F2-B21-pH75.bam,F2-B21-pH75,NA,NA,F,NA,Mo,Dam +22,Moderate,adapter_trim.F2-B22-pH75.bam,F2-B22-pH75,NA,NA,NA,M,Fa,Sire +24,Moderate,adapter_trim.F2-B24-pH75.bam,F2-B24-pH75,NA,NA,NA,F,Mo,Dam +25,Moderate,adapter_trim.F2-B25-pH75.bam,F2-B25-pH75,NA,NA,NA,F,Mo,Dam +1,Low,adapter_trim.F2-B1-pH8.bam,F2-B1-pH8,F,NA,NA,NA,Mo,Dam +2,Low,adapter_trim.F2-B2-pH8.bam,F2-B2-pH8,F,NA,NA,M,Pa,Both +3,Low,adapter_trim.F2-B3-pH8.bam,F2-B3-pH8,NA,NA,NA,M,Pa,Both +5,Low,adapter_trim.F2-B5-pH8.bam,F2-B5-pH8,F,NA,NA,NA,Mo,Dam +6,Low,adapter_trim.F2-B6-pH8.bam,F2-B6-pH8,NA,M,NA,F,Pa,Both +7,Low,adapter_trim.F2-B7-pH8.bam,F2-B7-pH8,NA,M,F,NA,Pa,Both +8,Low,adapter_trim.F2-B8-pH8.bam,F2-B8-pH8,NA,NA,M,F,Pa,Both +10,Low,adapter_trim.F2-B10-pH8.bam,F2-B10-pH8,NA,F,NA,NA,Mo,Dam +11,Low,adapter_trim.F2-B11-pH8.bam,F2-B11-pH8,M,NA,NA,NA,Fa,Sire +12,Low,adapter_trim.F2-B12-pH8.bam,F2-B12-pH8,M,NA,F,NA,Pa,Both +13,Low,adapter_trim.F2-B13-pH8.bam,F2-B13-pH8,NA,NA,F,NA,Mo,Dam +15,Low,adapter_trim.F2-B15-pH8.bam,F2-B15-pH8,NA,F,NA,NA,Mo,Dam +16,Low,adapter_trim.F2-B16-pH8.bam,F2-B16-pH8,NA,NA,M,F,Pa,Both +23,Low,adapter_trim.F2-B23-pH8.bam,F2-B23-pH8,NA,F,NA,NA,Mo,Dam diff --git a/RAnalysis/Output/Popgen/parentage_sequoia/F0BF1O/F0BF1O_final.csv b/RAnalysis/Output/Popgen/parentage_sequoia/F0BF1O/F0BF1O_final.csv new file mode 100644 index 0000000..20d13d3 --- /dev/null +++ b/RAnalysis/Output/Popgen/parentage_sequoia/F0BF1O/F0BF1O_final.csv @@ -0,0 +1,103 @@ +"","id","dam","sire","absLLRtotal","Fertilization_pairs","loci" +"1","adapter_trim.103.bam","adapter_trim.F0-B26.bam","adapter_trim.F0-B1.bam",1.48,TRUE,"CM084274_1_11619945.0, CM084267_1_2165108.0, CM084273_1_42285577.1, CM084269_1_46692099.1, CM084270_1_42349010.1, CM084265_1_70597838.1, CM084279_1_1073381.1, CM084265_1_64784798.0, CM084277_1_5804275.1, CM084265_1_70979994.0, CM084265_1_69924624.0, CM084278_1_20625578.1, CM084265_1_790976.0, CM084265_1_68798193.1, CM084265_1_14403559.1, CM084274_1_5120580.0, CM084277_1_1868384.1, CM084271_1_257113.1, CM084268_1_49735243.1, CM084266_1_69794604.1, CM084264_1_15064482.1, CM084266_1_57888563.0, CM084271_1_39685141.0, CM084267_1_8118559.1, CM084264_1_26777914.0, CM084274_1_4727166.1, CM084277_1_10628711.1, CM084265_1_64735183.1, CM084265_1_69004214.0, CM084278_1_16767353.1, CM084268_1_50681637.1, CM084274_1_4792243.0, CM084276_1_38117403.0, CM084266_1_69141150.0, CM084268_1_9292468.1, CM084264_1_68685021.0, CM084264_1_75338719.1, CM084271_1_344406.1, CM084264_1_70175545.1, CM084274_1_4694578.0, CM084264_1_69902276.0, CM084274_1_4686930.0, CM084275_1_40519747.1, CM084268_1_50693597.1, CM084266_1_64726670.0, CM084271_1_19655939.1, CM084271_1_44086139.1, CM084272_1_1308695.1, CM084264_1_69294926.0, CM084264_1_70171655.0" +"2","adapter_trim.F1-J209-pH75.bam","adapter_trim.F0-B10.bam","adapter_trim.F0-B1.bam",2.19,TRUE,"CM084271_1_43338888.1, CM084275_1_4345708.1, CM084264_1_72118697.1, CM084279_1_16586112.0, CM084264_1_26773650.0, CM084279_1_32666441.0, CM084266_1_66377784.0, CM084269_1_12905572.0, CM084279_1_31409578.0, CM084270_1_972098.0, CM084264_1_73152528.0, CM084269_1_47255820.0, CM084277_1_35287257.0, CM084264_1_34300042.0, CM084271_1_344491.1, CM084278_1_23541053.0, CM084270_1_9411945.0, CM084272_1_36474234.0, CM084277_1_30611564.0, CM084264_1_69861978.1, CM084266_1_68882944.0, CM084272_1_33453618.0, CM084272_1_18193991.1, CM084266_1_69085566.0, CM084270_1_32126102.1, CM084275_1_38995359.0, CM084266_1_69632417.0, CM084270_1_13944196.0, CM084279_1_1072330.1, CM084278_1_23541775.0, CM084265_1_8362532.1, CM084278_1_277789.0, CM084271_1_30532477.0, CM084277_1_29208395.1, CM084265_1_58484259.0, CM084264_1_71816897.0, CM084279_1_32666444.0, CM084266_1_64164374.1, CM084265_1_785368.0, CM084266_1_71319410.0, CM084264_1_73931025.1, CM084276_1_1625423.0, CM084265_1_59221308.0, CM084264_1_6517652.0, CM084265_1_69004202.1, CM084267_1_2233926.0, CM084269_1_4635090.1, CM084264_1_73926179.0, CM084265_1_70801089.1, CM084266_1_68519869.1" +"3","adapter_trim.F1-J259-pH75.bam","adapter_trim.F0-B26.bam","adapter_trim.F0-B1.bam",1.13,TRUE,"CM084278_1_5144637.1, CM084265_1_58487819.1, CM084271_1_43849282.1, CM084264_1_70173613.0, CM084275_1_400325.0, CM084271_1_44134413.1, CM084271_1_44190489.0, CM084276_1_37352348.0, CM084271_1_44075863.0, CM084267_1_8687446.0, CM084268_1_938570.1, CM084264_1_74191573.0, CM084279_1_10151169.0, CM084266_1_69085559.1, CM084266_1_69085644.1, CM084274_1_4726637.0, CM084265_1_1229890.1, CM084267_1_51248425.0, CM084273_1_31864421.1, CM084268_1_18519472.0, CM084271_1_3821161.0, CM084264_1_8098035.0, CM084279_1_32665186.0, CM084277_1_29780093.1, CM084265_1_68868190.1, CM084266_1_68643398.0, CM084270_1_47076316.0, CM084279_1_32640625.0, CM084264_1_73311139.0, CM084279_1_32640578.0, CM084272_1_18188802.0, CM084279_1_1064680.1, CM084268_1_49533758.0, CM084271_1_10301908.0, CM084277_1_4875961.0, CM084272_1_1891444.1, CM084268_1_1326636.0, CM084267_1_4505277.0, CM084272_1_1894276.0, CM084264_1_26773649.1, CM084271_1_44090307.1, CM084264_1_74191575.1, CM084264_1_74989689.1, CM084269_1_12905562.1, CM084270_1_42349010.1, CM084271_1_43546299.1, CM084266_1_68515581.1, CM084273_1_31862179.1, CM084279_1_1070264.0, CM084265_1_70975032.0" +"4","adapter_trim.F1-B16-pH75.bam","adapter_trim.F0-B10.bam","adapter_trim.F0-B1.bam",1.11,TRUE,"CM084268_1_2706209.1, CM084272_1_1894347.1, CM084274_1_29871125.0, CM084267_1_51248500.0, CM084274_1_3691337.1, CM084274_1_3691349.1, CM084272_1_33452338.0, CM084274_1_5046195.0, CM084265_1_72636291.1, CM084266_1_71166449.0, CM084268_1_28845439.1, CM084275_1_25397320.1, CM084269_1_1567133.0, CM084278_1_20865574.1, CM084271_1_1052214.0, CM084264_1_73926180.1, CM084276_1_25975836.0, CM084266_1_68519869.1, CM084278_1_20867809.1, CM084268_1_3695260.1, CM084265_1_19670958.0, CM084265_1_976180.0, CM084274_1_4694282.1, CM084266_1_70531188.0, CM084275_1_39776486.0, CM084267_1_2908130.0, CM084276_1_38557410.0, CM084267_1_6420851.0, CM084272_1_1894332.0, CM084278_1_20701768.1, CM084264_1_72118711.1, CM084275_1_667604.1, CM084271_1_44104716.1, CM084279_1_32666441.1, CM084270_1_4920968.1, CM084272_1_1894340.1, CM084271_1_3822736.1, CM084274_1_4727318.0, CM084267_1_50994187.0, CM084266_1_57883008.0, CM084267_1_6421475.1, CM084275_1_39776486.0, CM084268_1_50682932.1, CM084270_1_4920904.1, CM084274_1_4796871.1, CM084265_1_71925452.1, CM084266_1_69050667.0, CM084275_1_39502406.0, CM084265_1_68806466.0, CM084275_1_1212337.0" +"5","adapter_trim.F1-J69-pH8.bam","adapter_trim.F0-B16.bam","adapter_trim.F0-B1.bam",1.41,TRUE,"CM084274_1_5566177.0, CM084264_1_34301201.1, CM084279_1_10151202.0, CM084264_1_74800265.0, CM084276_1_1856630.1, CM084271_1_3820373.0, CM084270_1_42355495.0, CM084265_1_72078910.0, CM084275_1_660866.0, CM084267_1_51033717.0, CM084274_1_4769100.1, CM084266_1_46766309.0, CM084272_1_18194306.0, CM084274_1_4727318.1, CM084264_1_73349423.1, CM084264_1_72113815.1, CM084273_1_31866816.0, CM084279_1_1070761.1, CM084264_1_69861978.0, CM084275_1_8878521.1, CM084267_1_13261525.0, CM084265_1_68806446.0, CM084274_1_4795460.0, CM084272_1_18191577.1, CM084264_1_70471433.1, CM084264_1_8112674.1, CM084265_1_58036330.0, CM084277_1_36522229.1, CM084278_1_31960704.1, CM084278_1_22645215.0, CM084278_1_22665064.0, CM084277_1_1868384.1, CM084279_1_1070763.0, CM084278_1_22667297.1, CM084265_1_71899669.0, CM084275_1_38169332.1, CM084269_1_43529904.1, 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CM084272_1_18191577.0, CM084268_1_49719639.1, CM084271_1_44104716.0, CM084268_1_50323846.1, CM084276_1_59031.1, CM084276_1_12385340.0, CM084265_1_794917.0, CM084274_1_4708735.1, CM084268_1_9292474.0, CM084267_1_5168533.1, CM084271_1_3820373.1, CM084265_1_69381534.1, CM084274_1_4863726.1, CM084266_1_23317745.1, CM084265_1_64733395.0, CM084264_1_72075476.0, CM084269_1_40338566.0, CM084276_1_2855799.0, CM084273_1_32698879.0, CM084264_1_70173615.0, CM084267_1_48167440.1, CM084269_1_35627054.0, CM084266_1_69085555.1, CM084273_1_31864741.1, CM084264_1_69712159.1, CM084270_1_19464672.0, CM084269_1_43525146.1, CM084266_1_68200825.0, CM084264_1_73309406.1, CM084264_1_66525951.1, CM084265_1_71899674.1, CM084266_1_69806293.1, CM084267_1_52776062.0, CM084266_1_57882736.1, CM084266_1_67239899.0, CM084266_1_70706208.0, CM084265_1_14403558.0, CM084265_1_68806446.0, CM084268_1_50323442.0, CM084266_1_70930072.1, CM084264_1_68688988.0, CM084271_1_3819803.1, CM084267_1_2653035.0, CM084273_1_42253133.1, CM084265_1_68243992.0" +"9","adapter_trim.F1-B20-pH8.bam","adapter_trim.F0-B14.bam","adapter_trim.F0-B11.bam",0.8,TRUE,"CM084271_1_43338888.1, CM084275_1_4345708.1, CM084264_1_72118697.1, CM084279_1_16586112.0, CM084264_1_26773650.0, CM084279_1_32666441.0, CM084266_1_66377784.0, CM084269_1_12905572.0, CM084279_1_31409578.0, CM084270_1_972098.0, CM084264_1_73152528.0, CM084269_1_47255820.0, CM084277_1_35287257.0, CM084264_1_34300042.0, CM084271_1_344491.1, CM084278_1_23541053.0, CM084270_1_9411945.0, CM084272_1_36474234.0, CM084277_1_30611564.0, CM084264_1_69861978.1, CM084266_1_68882944.0, CM084272_1_33453618.0, CM084272_1_18193991.1, CM084266_1_69085566.0, CM084270_1_32126102.1, CM084275_1_38995359.0, CM084266_1_69632417.0, CM084270_1_13944196.0, CM084279_1_1072330.1, CM084278_1_23541775.0, CM084265_1_8362532.1, CM084278_1_277789.0, CM084271_1_30532477.0, CM084277_1_29208395.1, CM084265_1_58484259.0, CM084264_1_71816897.0, CM084279_1_32666444.0, CM084266_1_64164374.1, 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CM084268_1_50679551.0" +"13","adapter_trim.F1-J18-pH8.bam","adapter_trim.F0-B3.bam","adapter_trim.F0-B15.bam",1.32,TRUE,"CM084276_1_2841302.0, CM084264_1_69303600.1, CM084272_1_2928852.0, CM084268_1_50225017.1, CM084271_1_7136527.0, CM084278_1_30230906.1, CM084278_1_22654720.0, CM084271_1_3814146.1, CM084276_1_1625258.1, CM084277_1_30642880.1, CM084266_1_63468218.0, CM084277_1_18535852.1, CM084274_1_4788084.1, CM084279_1_10149541.0, CM084265_1_70979994.0, CM084279_1_161074.1, CM084275_1_312851.1, CM084279_1_10147354.1, CM084275_1_40706380.0, CM084273_1_42287132.0, CM084279_1_31409052.0, CM084264_1_8112660.1, CM084264_1_8099092.0, CM084267_1_2646659.0, CM084271_1_44104310.0, CM084274_1_3692513.0, CM084269_1_1556257.0, CM084264_1_73931173.0, CM084274_1_41688611.0, CM084276_1_714435.1, CM084269_1_39736980.1, CM084265_1_73060812.0, CM084271_1_274110.1, CM084272_1_33453891.1, CM084272_1_2928852.0, CM084270_1_46588167.0, CM084274_1_4708063.1, CM084265_1_71265272.1, CM084269_1_12904900.0, 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CM084269_1_43523897.1, CM084266_1_62460100.0, CM084267_1_2908962.0, CM084269_1_15812960.0, CM084269_1_40447978.0, CM084264_1_70456947.1, CM084276_1_25532347.1, CM084264_1_72054043.1, CM084268_1_28855794.0, CM084266_1_25399242.0, CM084271_1_218843.0, CM084266_1_23294618.1, CM084274_1_4709636.0, CM084271_1_3820313.0, CM084279_1_10156950.1, CM084276_1_1510348.0, CM084266_1_58099055.1, CM084274_1_7310951.1, CM084279_1_33759502.1, CM084264_1_70355057.0, CM084271_1_43860422.1, CM084274_1_7449618.1, CM084275_1_8878509.0, CM084270_1_4921089.1, CM084269_1_46689554.0, CM084266_1_69063995.0, CM084271_1_26325720.1, CM084267_1_6421632.1, CM084268_1_3704020.1, CM084272_1_27414394.1, CM084274_1_4734036.1" +"16","adapter_trim.F1-J13-pH8.bam","adapter_trim.F0-B26.bam","adapter_trim.F0-B15.bam",1.22,TRUE,"CM084274_1_11619945.0, CM084267_1_2165108.0, CM084273_1_42285577.1, CM084269_1_46692099.1, CM084270_1_42349010.1, CM084265_1_70597838.1, CM084279_1_1073381.1, CM084265_1_64784798.0, CM084277_1_5804275.1, CM084265_1_70979994.0, CM084265_1_69924624.0, CM084278_1_20625578.1, CM084265_1_790976.0, CM084265_1_68798193.1, CM084265_1_14403559.1, CM084274_1_5120580.0, CM084277_1_1868384.1, CM084271_1_257113.1, CM084268_1_49735243.1, CM084266_1_69794604.1, CM084264_1_15064482.1, CM084266_1_57888563.0, CM084271_1_39685141.0, CM084267_1_8118559.1, CM084264_1_26777914.0, CM084274_1_4727166.1, CM084277_1_10628711.1, CM084265_1_64735183.1, CM084265_1_69004214.0, CM084278_1_16767353.1, CM084268_1_50681637.1, CM084274_1_4792243.0, CM084276_1_38117403.0, CM084266_1_69141150.0, CM084268_1_9292468.1, CM084264_1_68685021.0, CM084264_1_75338719.1, CM084271_1_344406.1, CM084264_1_70175545.1, CM084274_1_4694578.0, CM084264_1_69902276.0, CM084274_1_4686930.0, CM084275_1_40519747.1, CM084268_1_50693597.1, CM084266_1_64726670.0, CM084271_1_19655939.1, CM084271_1_44086139.1, CM084272_1_1308695.1, CM084264_1_69294926.0, CM084264_1_70171655.0" 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CM084271_1_3821109.1, CM084276_1_38072621.0, CM084271_1_379057.1, CM084265_1_70597838.0, CM084279_1_10150670.1, CM084266_1_64723799.0, CM084266_1_57882847.0, CM084274_1_4795479.0, CM084268_1_3699708.1, CM084269_1_4636883.0, CM084267_1_52112064.1" +"18","adapter_trim.F1-J363-pH75.bam","adapter_trim.F0-B20.bam","adapter_trim.F0-B17.bam",1.37,FALSE,"CM084276_1_2841302.0, CM084264_1_69303600.1, CM084272_1_2928852.0, CM084268_1_50225017.1, CM084271_1_7136527.0, CM084278_1_30230906.1, CM084278_1_22654720.0, CM084271_1_3814146.1, CM084276_1_1625258.1, CM084277_1_30642880.1, CM084266_1_63468218.0, CM084277_1_18535852.1, CM084274_1_4788084.1, CM084279_1_10149541.0, CM084265_1_70979994.0, CM084279_1_161074.1, CM084275_1_312851.1, CM084279_1_10147354.1, CM084275_1_40706380.0, CM084273_1_42287132.0, CM084279_1_31409052.0, CM084264_1_8112660.1, CM084264_1_8099092.0, CM084267_1_2646659.0, CM084271_1_44104310.0, CM084274_1_3692513.0, CM084269_1_1556257.0, CM084264_1_73931173.0, CM084274_1_41688611.0, 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CM084278_1_20701768.1, CM084264_1_73311139.1, CM084267_1_48167385.1, CM084278_1_8558506.1, CM084271_1_7136548.0, CM084269_1_43523784.1, CM084274_1_4862958.1, CM084271_1_1052216.0, CM084269_1_41809356.0, CM084273_1_31862312.0, CM084267_1_52593775.0, CM084272_1_18574376.0, CM084267_1_4505260.1, CM084276_1_38772805.1, CM084266_1_50301524.0, CM084269_1_45423014.1, CM084271_1_37240198.0, CM084264_1_74995015.1, CM084265_1_64586070.1, CM084269_1_1567462.1, CM084279_1_31068246.0, CM084275_1_29098655.1, CM084272_1_11675308.1, CM084271_1_3819764.1, CM084278_1_22667324.0, CM084266_1_57888166.0, CM084265_1_70609248.1, CM084264_1_70391024.0, CM084271_1_19655912.0, CM084264_1_66561947.0, CM084264_1_68634815.1" +"20","adapter_trim.F1-J312-pH75.bam","adapter_trim.F0-B1.bam","adapter_trim.F0-B17.bam",1.54,TRUE,"CM084276_1_11709760.0, CM084275_1_39776646.0, CM084265_1_59221229.1, CM084271_1_3823416.0, CM084265_1_70609248.0, CM084271_1_44190489.0, CM084271_1_19655964.1, CM084278_1_23536923.1, 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CM084276_1_6150174.0, CM084267_1_6420851.0, CM084276_1_1855843.0, CM084269_1_4628634.1, CM084276_1_1625254.1, CM084265_1_24898691.1, CM084272_1_33452069.1, CM084274_1_5120654.0, CM084269_1_15820188.1, CM084270_1_4921025.0, CM084275_1_25393422.1" +"38","adapter_trim.F1-B9-pH75.bam","adapter_trim.F0-B16.bam","adapter_trim.F0-B2.bam",1.76,TRUE,"CM084266_1_71166411.0, CM084264_1_74266355.1, CM084279_1_993504.0, CM084269_1_15809861.0, CM084268_1_50225470.0, CM084265_1_791018.1, CM084274_1_4708223.1, CM084264_1_61167194.1, CM084268_1_50679570.1, CM084270_1_2585592.0, CM084276_1_56048.1, CM084271_1_44073395.0, CM084279_1_32652113.0, CM084268_1_50200519.0, CM084272_1_11675265.1, CM084265_1_70607188.1, CM084264_1_34294033.0, CM084266_1_70686279.1, CM084271_1_19655964.1, CM084275_1_39394528.1, CM084266_1_58086170.1, CM084269_1_15828546.1, CM084279_1_10147738.0, CM084279_1_32640566.0, CM084276_1_37352348.0, CM084266_1_70400231.0, CM084269_1_1541112.1, CM084277_1_29781980.0, CM084266_1_57888640.1, 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CM084277_1_30631457.0, CM084266_1_63195162.0, CM084265_1_71899241.0, CM084272_1_18189795.0, CM084270_1_46587591.1, CM084268_1_4550920.0, CM084264_1_65422.1, CM084264_1_74989681.1, CM084272_1_1596710.0, CM084267_1_13226543.0, CM084264_1_69861955.0, CM084264_1_69534058.0, CM084278_1_32252661.1, CM084266_1_64723748.0, CM084274_1_43102349.0, CM084277_1_18545080.0, CM084269_1_15812960.1, CM084276_1_38558458.0, CM084269_1_4626408.1, CM084264_1_70173613.0, CM084277_1_29781979.0, CM084267_1_2910813.0, CM084269_1_1541112.0, CM084269_1_15827787.1, CM084266_1_65401945.1, CM084265_1_60219092.1, CM084269_1_35627080.0, CM084274_1_4727151.0, CM084271_1_19655964.0, CM084272_1_33452045.1, CM084274_1_4726637.1, CM084267_1_52776062.1" +"100","adapter_trim.F1-J105-pH8.bam","adapter_trim.F0-B3.bam","adapter_trim.F0-B9.bam",1.73,TRUE,"CM084276_1_20157071.1, CM084273_1_31861630.1, CM084266_1_62460100.1, CM084269_1_43525116.0, CM084271_1_44070252.1, CM084264_1_34300494.0, CM084269_1_46688879.0, CM084265_1_72990731.0, CM084265_1_69913596.1, CM084264_1_74035920.0, CM084274_1_4863779.1, CM084279_1_33014997.1, CM084266_1_69141117.1, CM084272_1_1308695.1, CM084267_1_6421243.0, CM084275_1_40706319.0, CM084268_1_45604.1, CM084265_1_71796300.0, CM084270_1_47077588.0, CM084277_1_36521583.0, CM084277_1_18535878.1, CM084266_1_65576813.1, CM084269_1_47255758.1, CM084277_1_1856957.1, CM084266_1_69314168.0, CM084274_1_4708063.1, CM084265_1_70799357.1, CM084277_1_30953033.0, CM084276_1_61679.1, CM084279_1_1062135.1, CM084269_1_40337595.0, CM084274_1_34977105.1, CM084265_1_71899674.0, CM084276_1_1856630.0, CM084278_1_20734513.1, CM084266_1_69085559.0, CM084275_1_19996650.1, CM084264_1_73291573.1, CM084275_1_328864.1, CM084277_1_30611563.1, CM084264_1_15064138.1, CM084266_1_57886823.0, CM084274_1_4694230.1, CM084276_1_37352420.1, CM084267_1_8687423.0, CM084272_1_18574376.1, CM084269_1_1577700.0, CM084271_1_290137.1, CM084265_1_71794015.1, CM084278_1_20689091.1" +"101","adapter_trim.F1-J110-pH8.bam","adapter_trim.F0-B4.bam","adapter_trim.F0-B9.bam",1.62,FALSE,"CM084272_1_33589893.1, CM084278_1_22665572.0, CM084274_1_4730026.1, CM084265_1_64196870.0, CM084267_1_51248426.1, CM084269_1_43524068.1, CM084269_1_35627096.1, CM084267_1_52092638.1, CM084276_1_38775920.0, CM084269_1_40451682.1, CM084266_1_46766309.0, CM084266_1_38532340.1, CM084276_1_1849333.0, CM084276_1_38558585.0, CM084279_1_33014997.1, CM084265_1_71899674.0, CM084274_1_4700811.0, CM084273_1_7839325.0, CM084266_1_68884692.1, CM084264_1_61227529.1, CM084278_1_16773822.0, CM084267_1_30270830.0, CM084264_1_70175562.0, CM084266_1_71148883.0, CM084266_1_68643487.1, CM084265_1_68798214.0, CM084271_1_26324154.1, CM084271_1_44077341.0, CM084264_1_12084114.1, CM084269_1_42862704.0, CM084273_1_214008.0, CM084266_1_61737006.1, CM084276_1_38970477.0, CM084274_1_3692509.1, CM084268_1_2696122.1, CM084268_1_28851913.0, CM084264_1_34294396.1, CM084267_1_2908982.1, CM084265_1_72637027.1, CM084267_1_5881751.1, CM084264_1_68689028.0, CM084278_1_20701467.0, CM084274_1_3688102.1, CM084267_1_5830233.1, CM084264_1_2738116.1, CM084270_1_4920935.1, CM084278_1_20591181.1, CM084264_1_74035920.1, CM084279_1_993504.0, CM084273_1_268153.0" +"102","adapter_trim.F1-J67-pH8.bam","adapter_trim.F0-B11.bam","adapter_trim.F0-B9.bam",1.3,TRUE,"CM084269_1_15827759.1, CM084265_1_71265230.1, CM084269_1_15823423.0, CM084273_1_7839210.0, CM084265_1_68808156.1, CM084267_1_6420945.0, CM084267_1_8118616.1, CM084274_1_4709671.0, CM084269_1_39736980.1, CM084270_1_8242296.0, CM084279_1_1062150.0, CM084270_1_47076316.0, CM084271_1_3821267.0, CM084267_1_51000190.0, CM084269_1_15799394.0, CM084269_1_15799430.1, CM084271_1_344493.0, CM084268_1_23612534.0, CM084277_1_30631457.0, CM084266_1_63195162.0, CM084265_1_71899241.0, CM084272_1_18189795.0, CM084270_1_46587591.1, CM084268_1_4550920.0, CM084264_1_65422.1, CM084264_1_74989681.1, CM084272_1_1596710.0, CM084267_1_13226543.0, CM084264_1_69861955.0, CM084264_1_69534058.0, CM084278_1_32252661.1, CM084266_1_64723748.0, CM084274_1_43102349.0, CM084277_1_18545080.0, CM084269_1_15812960.1, CM084276_1_38558458.0, CM084269_1_4626408.1, CM084264_1_70173613.0, CM084277_1_29781979.0, CM084267_1_2910813.0, CM084269_1_1541112.0, CM084269_1_15827787.1, CM084266_1_65401945.1, CM084265_1_60219092.1, CM084269_1_35627080.0, CM084274_1_4727151.0, CM084271_1_19655964.0, CM084272_1_33452045.1, CM084274_1_4726637.1, CM084267_1_52776062.1" diff --git a/RAnalysis/Output/Popgen/parentage_sequoia/F0BF1O/F0BF1O_raw.csv b/RAnalysis/Output/Popgen/parentage_sequoia/F0BF1O/F0BF1O_raw.csv new file mode 100644 index 0000000..33e50ea --- /dev/null +++ b/RAnalysis/Output/Popgen/parentage_sequoia/F0BF1O/F0BF1O_raw.csv @@ -0,0 +1,671 @@ +"","id","dam","LLRdam","sire","LLRsire","loci","n.loci","absLLRtotal" +"1","adapter_trim.F1-J14-pH8.bam","adapter_trim.F0-B12.bam",-0.08,"adapter_trim.F0-B2.bam",-0.16,"CM084264_1_75278300.1, CM084278_1_23539431.1, CM084274_1_4694202.0, CM084266_1_57882573.0, CM084275_1_23095265.1, CM084271_1_39685141.0, CM084266_1_71148883.1, CM084271_1_7136527.1, CM084265_1_60316111.1, CM084278_1_20734376.0, CM084273_1_31865846.1, CM084275_1_126552.1, CM084269_1_45238238.0, CM084265_1_61648709.0, CM084264_1_72912659.0, CM084264_1_70174613.0, CM084265_1_73060898.0, CM084274_1_4727318.1, CM084265_1_68074592.0, CM084266_1_64002578.1, CM084267_1_9175515.0, CM084264_1_73152512.0, CM084264_1_70390974.1, CM084269_1_10663251.0, CM084270_1_39395913.0, CM084274_1_21933150.0, CM084271_1_3805850.1, CM084277_1_31027262.1, CM084266_1_68319477.0, CM084278_1_20630020.1, CM084267_1_832165.0, CM084264_1_8098050.1, CM084276_1_1510348.0, CM084269_1_43523950.1, CM084270_1_19464591.1, CM084275_1_39776636.1, CM084266_1_68478650.0, CM084279_1_31073085.0, CM084266_1_68661534.0, CM084272_1_23644236.0, CM084275_1_39394528.0, CM084265_1_70975032.1, CM084278_1_20735956.1, CM084267_1_6421422.0, CM084275_1_39781020.0, CM084265_1_72368147.1, CM084267_1_9175848.1, CM084264_1_34300890.1, CM084274_1_4773495.1, CM084272_1_23644236.1",50,0.24 +"2","adapter_trim.F1-J65-pH8.bam","adapter_trim.F0-B12.bam",-0.13,"adapter_trim.F0-B22.bam",-0.33,"CM084264_1_75278300.1, CM084278_1_23539431.1, CM084274_1_4694202.0, CM084266_1_57882573.0, CM084275_1_23095265.1, CM084271_1_39685141.0, CM084266_1_71148883.1, CM084271_1_7136527.1, CM084265_1_60316111.1, CM084278_1_20734376.0, CM084273_1_31865846.1, CM084275_1_126552.1, CM084269_1_45238238.0, CM084265_1_61648709.0, CM084264_1_72912659.0, CM084264_1_70174613.0, CM084265_1_73060898.0, CM084274_1_4727318.1, CM084265_1_68074592.0, CM084266_1_64002578.1, CM084267_1_9175515.0, CM084264_1_73152512.0, CM084264_1_70390974.1, CM084269_1_10663251.0, CM084270_1_39395913.0, CM084274_1_21933150.0, CM084271_1_3805850.1, CM084277_1_31027262.1, CM084266_1_68319477.0, CM084278_1_20630020.1, CM084267_1_832165.0, CM084264_1_8098050.1, CM084276_1_1510348.0, CM084269_1_43523950.1, CM084270_1_19464591.1, CM084275_1_39776636.1, CM084266_1_68478650.0, CM084279_1_31073085.0, CM084266_1_68661534.0, CM084272_1_23644236.0, CM084275_1_39394528.0, CM084265_1_70975032.1, CM084278_1_20735956.1, CM084267_1_6421422.0, CM084275_1_39781020.0, CM084265_1_72368147.1, CM084267_1_9175848.1, CM084264_1_34300890.1, CM084274_1_4773495.1, CM084272_1_23644236.1",50,0.46 +"3","adapter_trim.F1-J6-pH8.bam","adapter_trim.F0-B3.bam",-0.61,"adapter_trim.F0-B6.bam",-0.59,"CM084264_1_75278300.1, CM084278_1_23539431.1, CM084274_1_4694202.0, CM084266_1_57882573.0, CM084275_1_23095265.1, CM084271_1_39685141.0, CM084266_1_71148883.1, CM084271_1_7136527.1, CM084265_1_60316111.1, CM084278_1_20734376.0, CM084273_1_31865846.1, CM084275_1_126552.1, CM084269_1_45238238.0, CM084265_1_61648709.0, CM084264_1_72912659.0, CM084264_1_70174613.0, CM084265_1_73060898.0, CM084274_1_4727318.1, CM084265_1_68074592.0, CM084266_1_64002578.1, CM084267_1_9175515.0, CM084264_1_73152512.0, CM084264_1_70390974.1, CM084269_1_10663251.0, CM084270_1_39395913.0, CM084274_1_21933150.0, CM084271_1_3805850.1, CM084277_1_31027262.1, CM084266_1_68319477.0, CM084278_1_20630020.1, CM084267_1_832165.0, CM084264_1_8098050.1, CM084276_1_1510348.0, CM084269_1_43523950.1, CM084270_1_19464591.1, CM084275_1_39776636.1, CM084266_1_68478650.0, CM084279_1_31073085.0, CM084266_1_68661534.0, CM084272_1_23644236.0, CM084275_1_39394528.0, CM084265_1_70975032.1, CM084278_1_20735956.1, CM084267_1_6421422.0, CM084275_1_39781020.0, CM084265_1_72368147.1, CM084267_1_9175848.1, CM084264_1_34300890.1, CM084274_1_4773495.1, CM084272_1_23644236.1",50,1.2 +"4","adapter_trim.254.bam","adapter_trim.F0-B7.bam",-0.64,"adapter_trim.F0-B17.bam",-0.39,"CM084264_1_75278300.1, CM084278_1_23539431.1, CM084274_1_4694202.0, CM084266_1_57882573.0, CM084275_1_23095265.1, CM084271_1_39685141.0, CM084266_1_71148883.1, CM084271_1_7136527.1, CM084265_1_60316111.1, CM084278_1_20734376.0, CM084273_1_31865846.1, CM084275_1_126552.1, CM084269_1_45238238.0, 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CM084265_1_64832885.0, CM084278_1_279479.0, CM084270_1_39396029.0, CM084266_1_68919260.1, CM084277_1_6198938.1, CM084264_1_34301153.0, CM084270_1_4920968.0, CM084272_1_9069880.1, CM084269_1_43525214.0, CM084266_1_58087784.1, CM084268_1_37774069.0, CM084267_1_2908130.1",50,0.08 diff --git a/RAnalysis/Output/Popgen/parentage_sequoia/F0BF1O/F0BF1O_summary.csv b/RAnalysis/Output/Popgen/parentage_sequoia/F0BF1O/F0BF1O_summary.csv new file mode 100644 index 0000000..5b26ed5 --- /dev/null +++ b/RAnalysis/Output/Popgen/parentage_sequoia/F0BF1O/F0BF1O_summary.csv @@ -0,0 +1,529 @@ +"","sire","dam","id","LLRdam","LLRsire","loci","n.loci","absLLRtotal","dam.batch","sire.batch","Fertilization_pairs" +"1","adapter_trim.F0-B1.bam","adapter_trim.F0-B10.bam","adapter_trim.F1-J14-pH8.bam","-0.25","-0.32","CM084276_1_2874158.0, CM084264_1_70175551.1, CM084264_1_75338734.0, CM084267_1_2908130.0, CM084269_1_45238132.1, CM084270_1_42345710.0, CM084268_1_50225470.0, CM084265_1_50947034.0, 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CM084272_1_43469575.0, CM084272_1_1596807.1, CM084274_1_4795460.0, CM084279_1_10159270.1, CM084271_1_3819398.1, CM084265_1_54591404.0, CM084275_1_35722058.0, CM084266_1_71160169.1, CM084278_1_20734518.0, CM084268_1_50224886.0, CM084269_1_15812958.0, CM084276_1_1856639.1, CM084274_1_4709089.1, CM084264_1_6517652.1, CM084271_1_44086139.1, CM084271_1_19656025.0, CM084269_1_1555094.1, CM084264_1_69861978.1, CM084265_1_68868203.0, CM084277_1_18541349.1, CM084264_1_71816897.0, CM084277_1_29208305.1, CM084264_1_26771521.1, CM084274_1_4793173.0","50","0.49","4, 5","2, 3, 4, 5","TRUE" +"528","adapter_trim.F0-B9.bam","adapter_trim.F0-B11.bam","adapter_trim.F1-J163-pH8.bam","-0.68","-0.61","CM084267_1_51167096.0, CM084264_1_70173624.0, CM084278_1_22665572.1, CM084269_1_4635071.0, CM084266_1_71160177.0, CM084269_1_4636883.1, CM084264_1_69875456.0, CM084266_1_65576820.1, CM084267_1_8118559.1, CM084266_1_69056442.1, CM084266_1_66383694.1, CM084270_1_4751817.1, CM084266_1_1230901.1, CM084279_1_1062150.0, CM084277_1_30611563.1, CM084275_1_327919.0, CM084264_1_74191574.0, CM084271_1_1033788.0, CM084278_1_23542095.0, CM084267_1_13261449.1, CM084278_1_20701467.1, CM084274_1_42294261.1, CM084274_1_4868366.0, CM084274_1_4726244.0, CM084266_1_68643450.0, CM084273_1_32683023.0, CM084264_1_74989681.1, CM084271_1_44090335.0, CM084274_1_4788621.0, CM084266_1_66383694.1, CM084268_1_50200472.0, CM084275_1_39781020.1, CM084270_1_46588167.1, CM084269_1_1538788.0, CM084264_1_26771547.0, CM084272_1_1584317.1, CM084277_1_31027256.0, CM084266_1_67235326.0, CM084266_1_68515581.0, CM084271_1_1052214.1, CM084275_1_2509498.1, CM084267_1_6421555.0, CM084279_1_32641182.0, CM084266_1_71160169.0, CM084276_1_20157323.0, CM084267_1_8118540.1, CM084264_1_68689030.0, CM084277_1_10417520.0, CM084264_1_34293009.1, CM084267_1_8687423.0","50","1.29","4, 5","2, 3, 4, 5","TRUE" diff --git a/RAnalysis/Output/Popgen/parentage_sequoia/F1BF2O/High/F1BF2O_High_final.csv b/RAnalysis/Output/Popgen/parentage_sequoia/F1BF2O/High/F1BF2O_High_final.csv new file mode 100644 index 0000000..daeb9cf --- /dev/null +++ b/RAnalysis/Output/Popgen/parentage_sequoia/F1BF2O/High/F1BF2O_High_final.csv @@ -0,0 +1,34 @@ +"","id","dam","sire","absLLRtotal","Fertilization_pairs","loci" +"1","adapter_trim.F2-B16-pH7.bam","adapter_trim.F1-B8-pH8.bam","adapter_trim.F1-B1-pH8.bam",0.75,FALSE,"CM084271_1_3820382.0, CM084265_1_61648709.1, CM084264_1_70182851.0, CM084274_1_4708745.0, CM084274_1_42859635.1, CM084269_1_15799394.0, CM084266_1_59802412.1, CM084274_1_4694551.0, CM084267_1_2652526.1, CM084269_1_12905566.1, CM084265_1_72368204.0, CM084275_1_312956.0, CM084265_1_70800987.1, CM084278_1_22665042.1, CM084268_1_3703420.1, CM084266_1_69051092.1, CM084276_1_11709759.0, CM084276_1_1510348.0, CM084267_1_6420945.1, CM084275_1_39502397.0, CM084266_1_69793914.1, CM084279_1_10150670.0, CM084267_1_6420929.0, CM084264_1_73929737.1, CM084278_1_20625152.1, CM084273_1_31862642.1, CM084279_1_1063045.1, CM084276_1_38772790.0, CM084268_1_50323846.0, CM084278_1_22654264.1" +"2","adapter_trim.F2-J166-pH7.bam","adapter_trim.F1-B20-pH8.bam","adapter_trim.F1-B1-pH8.bam",0.83,TRUE,"CM084267_1_52593725.0, CM084272_1_33503448.1, CM084266_1_816291.0, CM084274_1_4769100.0, CM084275_1_328861.1, CM084275_1_39781005.0, CM084274_1_4773524.1, CM084270_1_13944196.1, CM084277_1_31222635.1, CM084273_1_42287132.0, CM084267_1_6420945.1, CM084264_1_70188213.1, CM084264_1_34300890.0, CM084264_1_73926177.1, CM084274_1_43090783.0, CM084267_1_51241061.0, CM084276_1_38552515.1, CM084264_1_26773690.1, CM084269_1_46688892.1, CM084265_1_65232929.0, CM084264_1_72912659.1, CM084264_1_73886234.1, CM084269_1_4628639.1, CM084264_1_39013.0, CM084265_1_66141859.0, CM084264_1_64874708.1, CM084272_1_18553681.1, CM084265_1_64196870.0, CM084266_1_57888563.0, CM084273_1_31862476.1" 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CM084269_1_1549405.0, CM084275_1_1304704.0, CM084276_1_56048.1, CM084265_1_70801101.1, CM084264_1_74721251.0, CM084273_1_4090291.1, CM084271_1_1034868.1, CM084268_1_28845509.1, CM084265_1_59221291.1, CM084270_1_39395973.1, CM084265_1_70979980.0, CM084266_1_57888582.1, CM084268_1_3691693.0, CM084277_1_1858867.1, CM084275_1_39420927.0, CM084269_1_12905590.1, CM084272_1_18188700.0, CM084275_1_29098652.1, CM084275_1_25388529.1, CM084278_1_22667296.1, CM084279_1_10156951.1, CM084278_1_20701768.0, CM084278_1_23542073.0, CM084266_1_66383611.1, CM084264_1_34292374.1" +"10","adapter_trim.F2-B5-pH7.bam","adapter_trim.F1-B15-pH8.bam","adapter_trim.F1-B11-pH8.bam",0.93,TRUE,"CM084264_1_72054043.1, CM084277_1_10628711.1, CM084275_1_327919.0, CM084265_1_70975032.1, CM084267_1_2908860.1, CM084267_1_8687423.0, CM084273_1_42252916.1, CM084268_1_45604.1, CM084268_1_3261991.0, CM084276_1_2857930.0, CM084273_1_31864421.1, CM084266_1_59802398.0, CM084265_1_71796317.1, CM084268_1_3691704.1, CM084279_1_1062144.0, CM084276_1_38797638.0, CM084268_1_45628.1, CM084269_1_1556257.1, CM084266_1_57888582.1, CM084272_1_1704343.0, CM084267_1_51000137.1, CM084267_1_13226543.1, CM084278_1_22654601.0, CM084278_1_20600197.1, CM084276_1_56075.0, CM084264_1_69902276.1, CM084269_1_45280054.1, CM084268_1_28851913.1, CM084271_1_44086160.0, CM084270_1_46588177.0" +"11","adapter_trim.F2-J184-pH7.bam","adapter_trim.F1-B25-pH8.bam","adapter_trim.F1-B11-pH8.bam",0.76,FALSE,"CM084279_1_32644251.0, CM084269_1_46745707.1, CM084265_1_72178237.0, CM084276_1_2855799.1, CM084268_1_46382.0, CM084278_1_279479.0, CM084276_1_20157071.0, CM084278_1_16773822.0, CM084265_1_58530104.0, CM084269_1_43525440.0, CM084269_1_43524168.0, CM084265_1_68808047.1, CM084276_1_38864870.0, CM084279_1_31409052.1, CM084274_1_4862958.0, CM084274_1_4695002.1, CM084266_1_62460034.0, CM084264_1_70174613.0, CM084272_1_41037487.0, CM084274_1_5028288.1, CM084269_1_46688909.1, CM084266_1_70706235.1, CM084265_1_71899241.0, 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CM084278_1_16774023.1, CM084264_1_65945.0, CM084279_1_1196450.0, CM084279_1_32640566.1, CM084264_1_2740287.0, CM084272_1_1311984.1, CM084265_1_71794141.0, CM084276_1_38287449.0, CM084269_1_1541112.1, CM084271_1_218855.0, CM084266_1_59802412.0, CM084269_1_1580179.0, CM084265_1_64586069.1, CM084265_1_71925442.1, CM084266_1_69141117.1, CM084271_1_44228071.1" +"31","adapter_trim.F2-J201-pH7.bam","adapter_trim.F1-B8-pH8.bam","adapter_trim.F1-B9-pH8.bam",0.58,TRUE,"CM084276_1_38117387.0, CM084274_1_4708745.0, CM084268_1_49721854.0, CM084264_1_66561947.1, CM084264_1_68685021.1, CM084266_1_58102684.0, CM084267_1_1134553.1, CM084271_1_43547024.0, CM084264_1_70173621.0, CM084265_1_73060812.0, CM084272_1_33453891.0, CM084264_1_26771547.1, CM084279_1_32673936.0, CM084276_1_935645.1, CM084279_1_32641182.0, CM084271_1_44091713.1, CM084274_1_4792130.0, CM084268_1_3699581.1, CM084266_1_57882838.0, CM084269_1_45310961.1, CM084278_1_20734507.0, CM084271_1_44075853.0, CM084265_1_73060895.0, CM084264_1_5215232.1, CM084274_1_4868385.1, CM084266_1_57882838.0, CM084269_1_4625303.1, CM084264_1_64269877.1, CM084273_1_31866838.1, CM084271_1_44091708.0" +"32","adapter_trim.F2-J204-pH7.bam","adapter_trim.F1-B8-pH8.bam","adapter_trim.F1-B9-pH8.bam",0.81,TRUE,"CM084270_1_4920904.0, CM084264_1_68634780.0, CM084265_1_1062161.0, CM084273_1_31862797.1, CM084264_1_2740163.0, CM084264_1_69294926.1, CM084267_1_51248426.1, CM084275_1_35720341.0, CM084273_1_4090291.0, CM084277_1_30027057.0, CM084276_1_1500490.0, CM084275_1_40706385.0, CM084265_1_59221320.1, CM084264_1_75278300.0, CM084274_1_4694578.0, CM084268_1_28845782.0, CM084274_1_4726244.0, CM084270_1_4751873.1, CM084264_1_34301159.0, CM084272_1_33453681.0, CM084265_1_68019714.1, CM084267_1_3748455.0, CM084269_1_46688972.0, CM084268_1_50792945.1, CM084268_1_50693597.0, CM084277_1_1856957.0, CM084265_1_66689301.1, CM084266_1_70707518.0, CM084264_1_69902275.0, CM084279_1_1072330.1" +"33","adapter_trim.F2-J227-pH7.bam","adapter_trim.F1-B8-pH8.bam","adapter_trim.F1-B9-pH8.bam",1.13,TRUE,"CM084274_1_4726637.1, CM084266_1_68659872.1, CM084268_1_9292527.0, CM084273_1_21179215.0, CM084274_1_4792130.0, CM084269_1_1549405.0, CM084275_1_1304704.0, CM084276_1_56048.1, CM084265_1_70801101.1, CM084264_1_74721251.0, CM084273_1_4090291.1, CM084271_1_1034868.1, CM084268_1_28845509.1, CM084265_1_59221291.1, CM084270_1_39395973.1, CM084265_1_70979980.0, CM084266_1_57888582.1, CM084268_1_3691693.0, CM084277_1_1858867.1, CM084275_1_39420927.0, CM084269_1_12905590.1, CM084272_1_18188700.0, CM084275_1_29098652.1, CM084275_1_25388529.1, CM084278_1_22667296.1, CM084279_1_10156951.1, CM084278_1_20701768.0, CM084278_1_23542073.0, CM084266_1_66383611.1, CM084264_1_34292374.1" diff --git a/RAnalysis/Output/Popgen/parentage_sequoia/F1BF2O/High/F1BF2O_High_raw.csv b/RAnalysis/Output/Popgen/parentage_sequoia/F1BF2O/High/F1BF2O_High_raw.csv new file mode 100644 index 0000000..24a3e82 --- /dev/null +++ b/RAnalysis/Output/Popgen/parentage_sequoia/F1BF2O/High/F1BF2O_High_raw.csv @@ -0,0 +1,461 @@ +"","id","loci","n.loci","dam","LLRdam","sire","LLRsire","absLLRtotal" +"1","adapter_trim.F2-J202-pH7.bam","CM084279_1_32652113.1, CM084270_1_46589385.0, CM084267_1_50994309.0, CM084267_1_9176202.1, CM084264_1_70190068.0, CM084274_1_4708749.1, CM084271_1_344493.0, CM084279_1_32917232.0, CM084266_1_46766307.1, CM084279_1_1882771.1, CM084271_1_4574012.1, CM084267_1_51242797.0, CM084279_1_32640566.0, CM084266_1_52832550.1, CM084266_1_62460034.0, CM084271_1_44107457.0, CM084269_1_45238132.0, CM084275_1_23083662.1, CM084268_1_2720906.0, CM084271_1_43860505.1, CM084267_1_2908962.0, CM084269_1_45423014.0, CM084269_1_43525341.0, CM084279_1_10149541.1, CM084265_1_71794015.1, CM084269_1_43523897.0, CM084265_1_71820726.1, CM084275_1_39502374.1, CM084272_1_1891463.0, CM084279_1_32641182.0",30,"adapter_trim.F1-B21-pH8.bam",0.07,"adapter_trim.F1-B4-pH8.bam",0.02,0.09 +"2","adapter_trim.F2-J205-pH7.bam","CM084279_1_32652113.1, CM084270_1_46589385.0, CM084267_1_50994309.0, CM084267_1_9176202.1, CM084264_1_70190068.0, CM084274_1_4708749.1, CM084271_1_344493.0, CM084279_1_32917232.0, CM084266_1_46766307.1, CM084279_1_1882771.1, CM084271_1_4574012.1, CM084267_1_51242797.0, CM084279_1_32640566.0, CM084266_1_52832550.1, CM084266_1_62460034.0, CM084271_1_44107457.0, CM084269_1_45238132.0, CM084275_1_23083662.1, CM084268_1_2720906.0, CM084271_1_43860505.1, CM084267_1_2908962.0, CM084269_1_45423014.0, CM084269_1_43525341.0, CM084279_1_10149541.1, CM084265_1_71794015.1, CM084269_1_43523897.0, CM084265_1_71820726.1, CM084275_1_39502374.1, CM084272_1_1891463.0, CM084279_1_32641182.0",30,"adapter_trim.F1-B20-pH8.bam",-0.19,"adapter_trim.F1-B4-pH8.bam",-0.19,0.38 +"3","adapter_trim.F2-B19-pH7.bam","CM084279_1_32652113.1, CM084270_1_46589385.0, CM084267_1_50994309.0, CM084267_1_9176202.1, CM084264_1_70190068.0, CM084274_1_4708749.1, CM084271_1_344493.0, CM084279_1_32917232.0, CM084266_1_46766307.1, CM084279_1_1882771.1, CM084271_1_4574012.1, CM084267_1_51242797.0, CM084279_1_32640566.0, CM084266_1_52832550.1, CM084266_1_62460034.0, CM084271_1_44107457.0, CM084269_1_45238132.0, CM084275_1_23083662.1, CM084268_1_2720906.0, CM084271_1_43860505.1, CM084267_1_2908962.0, CM084269_1_45423014.0, CM084269_1_43525341.0, CM084279_1_10149541.1, CM084265_1_71794015.1, CM084269_1_43523897.0, CM084265_1_71820726.1, CM084275_1_39502374.1, CM084272_1_1891463.0, CM084279_1_32641182.0",30,"adapter_trim.F1-B25-pH8.bam",-0.52,"adapter_trim.F1-B4-pH8.bam",-0.14,0.66 +"4","adapter_trim.F2-J162-pH7.bam","CM084275_1_38995254.1, CM084266_1_66483880.1, CM084268_1_14768218.1, CM084273_1_31866838.1, CM084267_1_2910813.0, CM084278_1_23542073.0, CM084269_1_43528550.0, CM084264_1_74191573.0, CM084279_1_929045.0, CM084271_1_3819544.1, CM084270_1_39395973.1, CM084268_1_14768218.0, CM084279_1_31065257.0, CM084265_1_69924624.0, CM084265_1_71925452.1, CM084277_1_29781979.0, CM084266_1_70181836.1, CM084269_1_1567462.0, CM084271_1_3822772.0, CM084277_1_5803945.0, CM084264_1_6517724.0, CM084279_1_1064676.1, CM084266_1_70707608.1, CM084270_1_32126724.1, CM084275_1_39776636.0, CM084276_1_38271843.1, CM084274_1_4869924.0, CM084269_1_12905590.0, CM084265_1_72091374.1, CM084264_1_26773648.1",30,"adapter_trim.F1-B25-pH8.bam",-0.37,"adapter_trim.F1-B5-pH8.bam",-0.3,0.67 +"5","adapter_trim.F2-J166-pH7.bam","CM084275_1_38995254.1, CM084266_1_66483880.1, CM084268_1_14768218.1, CM084273_1_31866838.1, CM084267_1_2910813.0, CM084278_1_23542073.0, CM084269_1_43528550.0, CM084264_1_74191573.0, CM084279_1_929045.0, CM084271_1_3819544.1, CM084270_1_39395973.1, CM084268_1_14768218.0, CM084279_1_31065257.0, CM084265_1_69924624.0, CM084265_1_71925452.1, CM084277_1_29781979.0, CM084266_1_70181836.1, CM084269_1_1567462.0, CM084271_1_3822772.0, CM084277_1_5803945.0, CM084264_1_6517724.0, CM084279_1_1064676.1, CM084266_1_70707608.1, CM084270_1_32126724.1, 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CM084275_1_39780958.1, CM084267_1_5165677.0, CM084268_1_50225351.1, CM084274_1_4734036.1, CM084268_1_42863.0, CM084276_1_38970482.1, CM084278_1_32252661.0, CM084264_1_8233152.0, CM084277_1_1868384.0",30,"adapter_trim.F1-B8-pH8.bam",-0.34,"adapter_trim.F1-B4-pH8.bam",-0.19,0.53 +"11","adapter_trim.F2-J164-pH7.bam","CM084266_1_71149025.1, CM084269_1_45438488.0, CM084276_1_20157194.1, CM084264_1_69682047.1, CM084265_1_3130640.1, CM084269_1_46745707.0, CM084272_1_1704343.0, CM084270_1_4751880.1, CM084279_1_1196441.1, CM084274_1_4709671.1, CM084267_1_51241061.1, CM084275_1_25393709.0, CM084265_1_54595186.1, CM084265_1_72368163.1, CM084267_1_51346515.0, CM084276_1_38558690.0, CM084279_1_1070294.0, CM084275_1_40706385.0, CM084275_1_524597.1, CM084269_1_43525271.0, CM084266_1_64164269.1, CM084264_1_64489814.1, CM084272_1_9069881.0, CM084274_1_42855653.1, CM084264_1_71189810.1, CM084275_1_25393709.0, CM084265_1_64735174.1, CM084272_1_9069880.0, CM084274_1_4708033.0, CM084271_1_379032.1",30,"adapter_trim.F1-B15-pH8.bam",0.17,"adapter_trim.F1-B7-pH8.bam",-0.04,0.21 +"12","adapter_trim.F2-J186-pH7.bam","CM084266_1_71149025.1, CM084269_1_45438488.0, CM084276_1_20157194.1, CM084264_1_69682047.1, CM084265_1_3130640.1, CM084269_1_46745707.0, CM084272_1_1704343.0, CM084270_1_4751880.1, CM084279_1_1196441.1, CM084274_1_4709671.1, CM084267_1_51241061.1, CM084275_1_25393709.0, CM084265_1_54595186.1, CM084265_1_72368163.1, CM084267_1_51346515.0, CM084276_1_38558690.0, CM084279_1_1070294.0, CM084275_1_40706385.0, CM084275_1_524597.1, CM084269_1_43525271.0, CM084266_1_64164269.1, CM084264_1_64489814.1, CM084272_1_9069881.0, CM084274_1_42855653.1, CM084264_1_71189810.1, CM084275_1_25393709.0, CM084265_1_64735174.1, CM084272_1_9069880.0, CM084274_1_4708033.0, CM084271_1_379032.1",30,"adapter_trim.F1-B15-pH8.bam",0.13,"adapter_trim.F1-B1-pH8.bam",-0.11,0.24 +"13","adapter_trim.F2-J186-pH7.bam","CM084276_1_38539465.0, CM084275_1_42592955.1, CM084265_1_72990731.0, CM084276_1_38558546.0, CM084269_1_42862797.0, CM084269_1_47716263.1, CM084278_1_20733311.0, CM084266_1_70686279.0, CM084269_1_45420488.1, CM084277_1_36519423.1, CM084277_1_30611605.1, CM084266_1_68515581.1, CM084264_1_2738116.1, CM084279_1_161041.1, CM084264_1_68688963.0, CM084274_1_42859658.0, CM084275_1_25388888.0, CM084268_1_28855794.0, CM084266_1_69315458.1, CM084271_1_218791.1, CM084275_1_39781020.0, CM084269_1_4636406.1, CM084266_1_69052082.0, CM084275_1_8878509.0, CM084276_1_62473.1, CM084269_1_43524375.1, CM084266_1_58099055.0, CM084265_1_65268038.0, CM084272_1_33453892.0, CM084269_1_46858338.1",30,"adapter_trim.F1-B15-pH8.bam",-0.23,"adapter_trim.F1-B5-pH8.bam",-0.29,0.52 +"14","adapter_trim.F2-B2-pH7.bam","CM084276_1_38539465.0, CM084275_1_42592955.1, CM084265_1_72990731.0, CM084276_1_38558546.0, CM084269_1_42862797.0, CM084269_1_47716263.1, CM084278_1_20733311.0, CM084266_1_70686279.0, CM084269_1_45420488.1, CM084277_1_36519423.1, CM084277_1_30611605.1, CM084266_1_68515581.1, CM084264_1_2738116.1, CM084279_1_161041.1, CM084264_1_68688963.0, CM084274_1_42859658.0, CM084275_1_25388888.0, CM084268_1_28855794.0, CM084266_1_69315458.1, CM084271_1_218791.1, CM084275_1_39781020.0, CM084269_1_4636406.1, CM084266_1_69052082.0, CM084275_1_8878509.0, CM084276_1_62473.1, CM084269_1_43524375.1, CM084266_1_58099055.0, CM084265_1_65268038.0, CM084272_1_33453892.0, CM084269_1_46858338.1",30,"adapter_trim.F1-B21-pH8.bam",-0.26,"adapter_trim.F1-B1-pH8.bam",-0.7,0.96 +"15","adapter_trim.F2-J185-pH7.bam","CM084264_1_68688356.1, CM084271_1_44090302.0, CM084276_1_38271842.0, CM084265_1_1118730.1, CM084271_1_43816629.0, CM084274_1_4795903.1, CM084265_1_64196870.0, CM084268_1_50679570.1, CM084274_1_4870202.0, CM084267_1_51248424.0, CM084268_1_82411.0, CM084265_1_24901859.0, CM084278_1_22665046.1, CM084271_1_257149.1, CM084270_1_32126724.0, CM084271_1_1052235.1, CM084265_1_71796309.1, CM084264_1_2738036.1, CM084269_1_1558034.0, CM084269_1_1572991.1, CM084277_1_30168073.1, CM084265_1_19672164.1, CM084276_1_38970482.0, CM084273_1_31863355.1, CM084276_1_38072623.1, CM084264_1_8098050.1, CM084269_1_42862803.1, CM084278_1_22654264.1, CM084271_1_44075853.0, CM084279_1_649298.1",30,"adapter_trim.F1-B15-pH8.bam",-0.08,"adapter_trim.F1-B10-pH8.bam",-0.41,0.49 +"16","adapter_trim.F2-J224-pH7.bam","CM084264_1_68688356.1, CM084271_1_44090302.0, CM084276_1_38271842.0, CM084265_1_1118730.1, CM084271_1_43816629.0, CM084274_1_4795903.1, CM084265_1_64196870.0, CM084268_1_50679570.1, CM084274_1_4870202.0, CM084267_1_51248424.0, CM084268_1_82411.0, CM084265_1_24901859.0, CM084278_1_22665046.1, CM084271_1_257149.1, CM084270_1_32126724.0, CM084271_1_1052235.1, CM084265_1_71796309.1, CM084264_1_2738036.1, CM084269_1_1558034.0, CM084269_1_1572991.1, CM084277_1_30168073.1, CM084265_1_19672164.1, CM084276_1_38970482.0, CM084273_1_31863355.1, CM084276_1_38072623.1, CM084264_1_8098050.1, CM084269_1_42862803.1, CM084278_1_22654264.1, CM084271_1_44075853.0, CM084279_1_649298.1",30,"adapter_trim.F1-B21-pH8.bam",0.03,"adapter_trim.F1-B1-pH8.bam",0.13,0.16 +"17","adapter_trim.F2-J225-pH7.bam","CM084264_1_68688356.1, CM084271_1_44090302.0, CM084276_1_38271842.0, CM084265_1_1118730.1, CM084271_1_43816629.0, CM084274_1_4795903.1, CM084265_1_64196870.0, CM084268_1_50679570.1, CM084274_1_4870202.0, CM084267_1_51248424.0, CM084268_1_82411.0, CM084265_1_24901859.0, CM084278_1_22665046.1, CM084271_1_257149.1, CM084270_1_32126724.0, CM084271_1_1052235.1, CM084265_1_71796309.1, CM084264_1_2738036.1, CM084269_1_1558034.0, CM084269_1_1572991.1, CM084277_1_30168073.1, CM084265_1_19672164.1, CM084276_1_38970482.0, CM084273_1_31863355.1, CM084276_1_38072623.1, CM084264_1_8098050.1, CM084269_1_42862803.1, CM084278_1_22654264.1, CM084271_1_44075853.0, CM084279_1_649298.1",30,"adapter_trim.F1-B20-pH8.bam",-0.63,"adapter_trim.F1-B11-pH8.bam",-0.28,0.91 +"18","adapter_trim.F2-J162-pH7.bam","CM084264_1_69287134.1, CM084278_1_16767353.0, CM084269_1_40336193.0, CM084266_1_69315469.1, CM084272_1_33597669.0, CM084264_1_69287336.0, CM084278_1_22667362.0, CM084272_1_18170755.0, CM084264_1_72929492.1, CM084278_1_29698402.1, CM084265_1_70979988.0, CM084268_1_50321855.0, CM084272_1_33503418.0, CM084272_1_33452056.0, CM084265_1_68243992.0, CM084275_1_39774900.0, CM084265_1_14403532.0, CM084272_1_7002400.0, CM084277_1_30168398.0, CM084271_1_37244938.1, CM084268_1_49533758.0, CM084265_1_70977429.1, CM084269_1_1567848.0, CM084276_1_2855915.0, CM084265_1_71828881.1, CM084269_1_46858338.0, CM084266_1_64726670.0, CM084272_1_18188792.1, CM084277_1_30635514.1, CM084266_1_57886153.0",30,"adapter_trim.F1-B15-pH8.bam",-0.68,"adapter_trim.F1-B9-pH8.bam",-0.19,0.87 +"19","adapter_trim.F2-J187-pH7.bam","CM084264_1_69287134.1, CM084278_1_16767353.0, CM084269_1_40336193.0, CM084266_1_69315469.1, CM084272_1_33597669.0, CM084264_1_69287336.0, CM084278_1_22667362.0, CM084272_1_18170755.0, CM084264_1_72929492.1, CM084278_1_29698402.1, CM084265_1_70979988.0, CM084268_1_50321855.0, CM084272_1_33503418.0, CM084272_1_33452056.0, CM084265_1_68243992.0, CM084275_1_39774900.0, CM084265_1_14403532.0, CM084272_1_7002400.0, CM084277_1_30168398.0, CM084271_1_37244938.1, CM084268_1_49533758.0, CM084265_1_70977429.1, CM084269_1_1567848.0, CM084276_1_2855915.0, CM084265_1_71828881.1, CM084269_1_46858338.0, CM084266_1_64726670.0, CM084272_1_18188792.1, CM084277_1_30635514.1, CM084266_1_57886153.0",30,"adapter_trim.F1-B15-pH8.bam",-0.38,"adapter_trim.F1-B5-pH8.bam",-0.2,0.58 +"20","adapter_trim.F2-J205-pH7.bam","CM084264_1_69287134.1, CM084278_1_16767353.0, CM084269_1_40336193.0, CM084266_1_69315469.1, CM084272_1_33597669.0, CM084264_1_69287336.0, CM084278_1_22667362.0, CM084272_1_18170755.0, CM084264_1_72929492.1, CM084278_1_29698402.1, CM084265_1_70979988.0, CM084268_1_50321855.0, CM084272_1_33503418.0, CM084272_1_33452056.0, CM084265_1_68243992.0, CM084275_1_39774900.0, CM084265_1_14403532.0, CM084272_1_7002400.0, CM084277_1_30168398.0, CM084271_1_37244938.1, CM084268_1_49533758.0, CM084265_1_70977429.1, CM084269_1_1567848.0, CM084276_1_2855915.0, CM084265_1_71828881.1, CM084269_1_46858338.0, CM084266_1_64726670.0, CM084272_1_18188792.1, CM084277_1_30635514.1, CM084266_1_57886153.0",30,"adapter_trim.F1-B15-pH8.bam",-0.33,"adapter_trim.F1-B9-pH8.bam",-0.25,0.58 +"21","adapter_trim.F2-J223-pH7.bam","CM084264_1_69287134.1, CM084278_1_16767353.0, CM084269_1_40336193.0, CM084266_1_69315469.1, CM084272_1_33597669.0, CM084264_1_69287336.0, CM084278_1_22667362.0, CM084272_1_18170755.0, CM084264_1_72929492.1, CM084278_1_29698402.1, CM084265_1_70979988.0, CM084268_1_50321855.0, CM084272_1_33503418.0, CM084272_1_33452056.0, CM084265_1_68243992.0, CM084275_1_39774900.0, CM084265_1_14403532.0, CM084272_1_7002400.0, CM084277_1_30168398.0, CM084271_1_37244938.1, CM084268_1_49533758.0, CM084265_1_70977429.1, CM084269_1_1567848.0, CM084276_1_2855915.0, CM084265_1_71828881.1, CM084269_1_46858338.0, CM084266_1_64726670.0, CM084272_1_18188792.1, CM084277_1_30635514.1, CM084266_1_57886153.0",30,"adapter_trim.F1-B20-pH8.bam",-0.29,"adapter_trim.F1-B5-pH8.bam",-0.08,0.37 +"22","adapter_trim.F2-J224-pH7.bam","CM084264_1_69287134.1, CM084278_1_16767353.0, CM084269_1_40336193.0, CM084266_1_69315469.1, CM084272_1_33597669.0, CM084264_1_69287336.0, CM084278_1_22667362.0, CM084272_1_18170755.0, CM084264_1_72929492.1, CM084278_1_29698402.1, CM084265_1_70979988.0, CM084268_1_50321855.0, CM084272_1_33503418.0, CM084272_1_33452056.0, CM084265_1_68243992.0, CM084275_1_39774900.0, CM084265_1_14403532.0, CM084272_1_7002400.0, CM084277_1_30168398.0, CM084271_1_37244938.1, CM084268_1_49533758.0, CM084265_1_70977429.1, CM084269_1_1567848.0, CM084276_1_2855915.0, CM084265_1_71828881.1, CM084269_1_46858338.0, CM084266_1_64726670.0, CM084272_1_18188792.1, CM084277_1_30635514.1, CM084266_1_57886153.0",30,"adapter_trim.F1-B20-pH8.bam",-0.09,"adapter_trim.F1-B1-pH8.bam",0.1,0.19 +"23","adapter_trim.F2-B12-pH7.bam","CM084264_1_69287134.1, CM084278_1_16767353.0, CM084269_1_40336193.0, CM084266_1_69315469.1, CM084272_1_33597669.0, CM084264_1_69287336.0, CM084278_1_22667362.0, CM084272_1_18170755.0, CM084264_1_72929492.1, CM084278_1_29698402.1, CM084265_1_70979988.0, CM084268_1_50321855.0, CM084272_1_33503418.0, CM084272_1_33452056.0, CM084265_1_68243992.0, CM084275_1_39774900.0, CM084265_1_14403532.0, CM084272_1_7002400.0, CM084277_1_30168398.0, CM084271_1_37244938.1, CM084268_1_49533758.0, CM084265_1_70977429.1, CM084269_1_1567848.0, CM084276_1_2855915.0, CM084265_1_71828881.1, CM084269_1_46858338.0, CM084266_1_64726670.0, CM084272_1_18188792.1, CM084277_1_30635514.1, CM084266_1_57886153.0",30,"adapter_trim.F1-B8-pH8.bam",-0.16,"adapter_trim.F1-B1-pH8.bam",-0.33,0.49 +"24","adapter_trim.F2-B4-pH7.bam","CM084264_1_69287134.1, CM084278_1_16767353.0, CM084269_1_40336193.0, CM084266_1_69315469.1, CM084272_1_33597669.0, CM084264_1_69287336.0, CM084278_1_22667362.0, CM084272_1_18170755.0, CM084264_1_72929492.1, CM084278_1_29698402.1, CM084265_1_70979988.0, CM084268_1_50321855.0, CM084272_1_33503418.0, CM084272_1_33452056.0, CM084265_1_68243992.0, CM084275_1_39774900.0, CM084265_1_14403532.0, CM084272_1_7002400.0, CM084277_1_30168398.0, CM084271_1_37244938.1, CM084268_1_49533758.0, CM084265_1_70977429.1, CM084269_1_1567848.0, CM084276_1_2855915.0, CM084265_1_71828881.1, CM084269_1_46858338.0, CM084266_1_64726670.0, CM084272_1_18188792.1, CM084277_1_30635514.1, CM084266_1_57886153.0",30,"adapter_trim.F1-B21-pH8.bam",-0.17,"adapter_trim.F1-B3-pH8.bam",-0.05,0.22 +"25","adapter_trim.F2-B5-pH7.bam","CM084264_1_69287134.1, CM084278_1_16767353.0, CM084269_1_40336193.0, CM084266_1_69315469.1, CM084272_1_33597669.0, CM084264_1_69287336.0, CM084278_1_22667362.0, CM084272_1_18170755.0, CM084264_1_72929492.1, CM084278_1_29698402.1, CM084265_1_70979988.0, CM084268_1_50321855.0, CM084272_1_33503418.0, CM084272_1_33452056.0, CM084265_1_68243992.0, CM084275_1_39774900.0, CM084265_1_14403532.0, CM084272_1_7002400.0, CM084277_1_30168398.0, CM084271_1_37244938.1, CM084268_1_49533758.0, CM084265_1_70977429.1, CM084269_1_1567848.0, CM084276_1_2855915.0, CM084265_1_71828881.1, CM084269_1_46858338.0, CM084266_1_64726670.0, CM084272_1_18188792.1, CM084277_1_30635514.1, CM084266_1_57886153.0",30,"adapter_trim.F1-B25-pH8.bam",-0.27,"adapter_trim.F1-B4-pH8.bam",-0.35,0.62 +"26","adapter_trim.F2-J165-pH7.bam","CM084267_1_5165711.0, CM084272_1_26336261.1, CM084267_1_5165671.0, CM084266_1_68960355.1, CM084278_1_16774023.0, CM084279_1_161074.0, CM084278_1_20732803.1, CM084278_1_20732810.1, CM084267_1_700054.1, CM084272_1_18191577.1, CM084274_1_4694916.0, CM084278_1_16773822.1, CM084278_1_23555170.0, CM084274_1_4785935.1, CM084267_1_5881718.0, CM084266_1_23321829.1, CM084278_1_32252661.1, CM084267_1_5165677.0, CM084269_1_47255820.1, CM084269_1_1556253.1, CM084275_1_39394589.1, CM084269_1_1567833.1, CM084265_1_65233046.0, CM084264_1_34294487.0, CM084267_1_9176202.1, CM084266_1_68643450.1, CM084273_1_7839417.1, CM084279_1_23112955.0, CM084278_1_5144752.0, CM084264_1_34300372.1",30,"adapter_trim.F1-B25-pH8.bam",-0.17,"adapter_trim.F1-B7-pH8.bam",-0.29,0.46 +"27","adapter_trim.F2-J185-pH7.bam","CM084267_1_5165711.0, CM084272_1_26336261.1, CM084267_1_5165671.0, CM084266_1_68960355.1, CM084278_1_16774023.0, CM084279_1_161074.0, CM084278_1_20732803.1, CM084278_1_20732810.1, CM084267_1_700054.1, CM084272_1_18191577.1, CM084274_1_4694916.0, CM084278_1_16773822.1, CM084278_1_23555170.0, CM084274_1_4785935.1, CM084267_1_5881718.0, CM084266_1_23321829.1, CM084278_1_32252661.1, CM084267_1_5165677.0, CM084269_1_47255820.1, CM084269_1_1556253.1, CM084275_1_39394589.1, CM084269_1_1567833.1, CM084265_1_65233046.0, CM084264_1_34294487.0, CM084267_1_9176202.1, CM084266_1_68643450.1, CM084273_1_7839417.1, CM084279_1_23112955.0, CM084278_1_5144752.0, CM084264_1_34300372.1",30,"adapter_trim.F1-B15-pH8.bam",0.07,"adapter_trim.F1-B1-pH8.bam",-0.11,0.18 +"28","adapter_trim.F2-J202-pH7.bam","CM084267_1_5165711.0, CM084272_1_26336261.1, CM084267_1_5165671.0, CM084266_1_68960355.1, CM084278_1_16774023.0, CM084279_1_161074.0, CM084278_1_20732803.1, CM084278_1_20732810.1, CM084267_1_700054.1, CM084272_1_18191577.1, CM084274_1_4694916.0, CM084278_1_16773822.1, CM084278_1_23555170.0, CM084274_1_4785935.1, CM084267_1_5881718.0, CM084266_1_23321829.1, CM084278_1_32252661.1, CM084267_1_5165677.0, CM084269_1_47255820.1, CM084269_1_1556253.1, CM084275_1_39394589.1, CM084269_1_1567833.1, CM084265_1_65233046.0, CM084264_1_34294487.0, CM084267_1_9176202.1, CM084266_1_68643450.1, CM084273_1_7839417.1, CM084279_1_23112955.0, CM084278_1_5144752.0, CM084264_1_34300372.1",30,"adapter_trim.F1-B20-pH8.bam",0,"adapter_trim.F1-B8-pH8.bam",-0.15,0.15 +"29","adapter_trim.F2-J206-pH7.bam","CM084267_1_5165711.0, CM084272_1_26336261.1, CM084267_1_5165671.0, CM084266_1_68960355.1, CM084278_1_16774023.0, CM084279_1_161074.0, CM084278_1_20732803.1, CM084278_1_20732810.1, CM084267_1_700054.1, CM084272_1_18191577.1, CM084274_1_4694916.0, CM084278_1_16773822.1, CM084278_1_23555170.0, CM084274_1_4785935.1, CM084267_1_5881718.0, CM084266_1_23321829.1, CM084278_1_32252661.1, CM084267_1_5165677.0, CM084269_1_47255820.1, CM084269_1_1556253.1, CM084275_1_39394589.1, CM084269_1_1567833.1, CM084265_1_65233046.0, CM084264_1_34294487.0, CM084267_1_9176202.1, CM084266_1_68643450.1, CM084273_1_7839417.1, CM084279_1_23112955.0, CM084278_1_5144752.0, CM084264_1_34300372.1",30,"adapter_trim.F1-B20-pH8.bam",-0.36,"adapter_trim.F1-B3-pH8.bam",-0.22,0.58 +"30","adapter_trim.F2-J201-pH7.bam","CM084266_1_69095439.1, CM084275_1_77171.0, CM084270_1_32126728.0, CM084265_1_60313980.0, CM084268_1_50323846.1, CM084271_1_3821130.0, CM084264_1_66525866.0, CM084274_1_4869791.0, CM084272_1_18194957.1, CM084265_1_73061223.1, CM084266_1_57884809.1, CM084265_1_70609247.0, CM084267_1_30270802.1, CM084267_1_2426163.1, CM084276_1_38864870.0, CM084279_1_32652116.1, CM084266_1_57888563.1, CM084274_1_21933150.1, CM084270_1_47077588.0, CM084275_1_328864.0, CM084266_1_57888640.1, CM084265_1_68869491.1, CM084264_1_2738113.0, CM084274_1_4787926.1, CM084267_1_13261464.0, CM084271_1_257176.0, CM084272_1_33597669.1, CM084271_1_43546299.1, CM084276_1_12392692.1, CM084272_1_1704379.1",30,"adapter_trim.F1-B8-pH8.bam",-0.19,"adapter_trim.F1-B7-pH8.bam",-0.25,0.44 +"31","adapter_trim.F2-J165-pH7.bam","CM084269_1_45420488.0, CM084277_1_31027256.1, CM084267_1_13261525.0, CM084277_1_29208301.1, CM084264_1_72054053.1, CM084277_1_29780153.1, CM084271_1_43868181.0, CM084268_1_1326636.0, CM084266_1_67239927.0, CM084276_1_4238124.1, CM084279_1_32640625.1, CM084276_1_1856066.0, CM084273_1_32698906.0, CM084266_1_71166412.0, CM084266_1_71148884.1, CM084264_1_73152528.0, CM084268_1_3699577.0, CM084266_1_52832550.1, CM084271_1_43546299.1, CM084274_1_42855653.1, CM084270_1_46587632.1, CM084265_1_72368293.1, CM084265_1_71899241.1, CM084268_1_50225025.0, CM084270_1_9408158.0, CM084276_1_2855917.1, CM084267_1_50994187.0, CM084275_1_39394589.0, CM084266_1_57888166.1, CM084275_1_23095308.0",30,"adapter_trim.F1-B21-pH8.bam",-0.76,"adapter_trim.F1-B8-pH8.bam",-0.23,0.99 +"32","adapter_trim.F2-J184-pH7.bam","CM084269_1_45420488.0, CM084277_1_31027256.1, CM084267_1_13261525.0, CM084277_1_29208301.1, CM084264_1_72054053.1, CM084277_1_29780153.1, CM084271_1_43868181.0, CM084268_1_1326636.0, CM084266_1_67239927.0, CM084276_1_4238124.1, CM084279_1_32640625.1, CM084276_1_1856066.0, CM084273_1_32698906.0, CM084266_1_71166412.0, CM084266_1_71148884.1, CM084264_1_73152528.0, CM084268_1_3699577.0, CM084266_1_52832550.1, CM084271_1_43546299.1, CM084274_1_42855653.1, CM084270_1_46587632.1, CM084265_1_72368293.1, CM084265_1_71899241.1, CM084268_1_50225025.0, CM084270_1_9408158.0, CM084276_1_2855917.1, CM084267_1_50994187.0, CM084275_1_39394589.0, CM084266_1_57888166.1, CM084275_1_23095308.0",30,"adapter_trim.F1-B25-pH8.bam",-0.33,"adapter_trim.F1-B9-pH8.bam",-0.33,0.66 +"33","adapter_trim.F2-B15-pH7.bam","CM084269_1_45420488.0, CM084277_1_31027256.1, CM084267_1_13261525.0, CM084277_1_29208301.1, CM084264_1_72054053.1, CM084277_1_29780153.1, CM084271_1_43868181.0, CM084268_1_1326636.0, CM084266_1_67239927.0, CM084276_1_4238124.1, CM084279_1_32640625.1, CM084276_1_1856066.0, CM084273_1_32698906.0, CM084266_1_71166412.0, CM084266_1_71148884.1, CM084264_1_73152528.0, CM084268_1_3699577.0, CM084266_1_52832550.1, CM084271_1_43546299.1, CM084274_1_42855653.1, CM084270_1_46587632.1, CM084265_1_72368293.1, CM084265_1_71899241.1, CM084268_1_50225025.0, CM084270_1_9408158.0, CM084276_1_2855917.1, CM084267_1_50994187.0, CM084275_1_39394589.0, CM084266_1_57888166.1, CM084275_1_23095308.0",30,"adapter_trim.F1-B25-pH8.bam",-0.28,"adapter_trim.F1-B7-pH8.bam",-0.7,0.98 +"34","adapter_trim.F2-B8-pH7.bam","CM084269_1_45420488.0, CM084277_1_31027256.1, CM084267_1_13261525.0, CM084277_1_29208301.1, CM084264_1_72054053.1, CM084277_1_29780153.1, CM084271_1_43868181.0, CM084268_1_1326636.0, CM084266_1_67239927.0, CM084276_1_4238124.1, CM084279_1_32640625.1, CM084276_1_1856066.0, CM084273_1_32698906.0, CM084266_1_71166412.0, CM084266_1_71148884.1, CM084264_1_73152528.0, CM084268_1_3699577.0, CM084266_1_52832550.1, CM084271_1_43546299.1, CM084274_1_42855653.1, CM084270_1_46587632.1, CM084265_1_72368293.1, CM084265_1_71899241.1, CM084268_1_50225025.0, CM084270_1_9408158.0, CM084276_1_2855917.1, CM084267_1_50994187.0, CM084275_1_39394589.0, CM084266_1_57888166.1, CM084275_1_23095308.0",30,"adapter_trim.F1-B25-pH8.bam",-0.09,"adapter_trim.F1-B5-pH8.bam",-0.21,0.3 +"35","adapter_trim.F2-J164-pH7.bam","CM084267_1_50392699.0, CM084264_1_70182851.1, CM084265_1_68714893.0, CM084272_1_1327530.0, CM084272_1_11675308.1, CM084274_1_4792352.1, CM084264_1_74989681.1, CM084271_1_44106803.0, CM084276_1_37353162.1, CM084269_1_15828546.1, CM084274_1_4723647.0, CM084265_1_68786095.1, CM084265_1_72071381.0, CM084267_1_2233926.1, CM084272_1_1144109.0, CM084270_1_47077588.1, CM084275_1_39776636.1, CM084264_1_72117194.0, CM084269_1_1549398.1, CM084267_1_52896264.1, CM084266_1_69793931.1, CM084279_1_649336.0, CM084271_1_26332979.1, CM084271_1_3821130.0, CM084271_1_37244938.0, CM084275_1_35722074.1, CM084271_1_44069731.1, CM084271_1_379011.1, CM084265_1_66141830.1, CM084266_1_70396245.1",30,"adapter_trim.F1-B20-pH8.bam",-0.24,"adapter_trim.F1-B10-pH8.bam",-0.26,0.5 +"36","adapter_trim.F2-J205-pH7.bam","CM084267_1_50392699.0, CM084264_1_70182851.1, CM084265_1_68714893.0, CM084272_1_1327530.0, CM084272_1_11675308.1, CM084274_1_4792352.1, CM084264_1_74989681.1, CM084271_1_44106803.0, CM084276_1_37353162.1, CM084269_1_15828546.1, CM084274_1_4723647.0, CM084265_1_68786095.1, CM084265_1_72071381.0, CM084267_1_2233926.1, CM084272_1_1144109.0, CM084270_1_47077588.1, CM084275_1_39776636.1, CM084264_1_72117194.0, CM084269_1_1549398.1, CM084267_1_52896264.1, CM084266_1_69793931.1, CM084279_1_649336.0, CM084271_1_26332979.1, CM084271_1_3821130.0, CM084271_1_37244938.0, CM084275_1_35722074.1, CM084271_1_44069731.1, CM084271_1_379011.1, CM084265_1_66141830.1, CM084266_1_70396245.1",30,"adapter_trim.F1-B15-pH8.bam",-0.04,"adapter_trim.F1-B8-pH8.bam",-0.08,0.12 +"37","adapter_trim.F2-B19-pH7.bam","CM084267_1_50392699.0, CM084264_1_70182851.1, CM084265_1_68714893.0, CM084272_1_1327530.0, CM084272_1_11675308.1, CM084274_1_4792352.1, CM084264_1_74989681.1, CM084271_1_44106803.0, CM084276_1_37353162.1, CM084269_1_15828546.1, CM084274_1_4723647.0, CM084265_1_68786095.1, CM084265_1_72071381.0, CM084267_1_2233926.1, CM084272_1_1144109.0, CM084270_1_47077588.1, CM084275_1_39776636.1, CM084264_1_72117194.0, CM084269_1_1549398.1, CM084267_1_52896264.1, CM084266_1_69793931.1, CM084279_1_649336.0, CM084271_1_26332979.1, CM084271_1_3821130.0, CM084271_1_37244938.0, CM084275_1_35722074.1, CM084271_1_44069731.1, CM084271_1_379011.1, CM084265_1_66141830.1, CM084266_1_70396245.1",30,"adapter_trim.F1-B25-pH8.bam",-0.35,"adapter_trim.F1-B9-pH8.bam",-0.52,0.87 +"38","adapter_trim.F2-J186-pH7.bam","CM084265_1_65233014.1, CM084267_1_2652774.0, CM084271_1_19655228.1, CM084274_1_43102349.1, CM084272_1_33617974.1, CM084272_1_33452045.0, CM084267_1_50392699.1, CM084265_1_60219092.1, CM084265_1_69913596.0, CM084273_1_4090291.1, CM084264_1_64874708.1, CM084277_1_10628425.1, CM084269_1_15818485.0, CM084276_1_1856094.0, CM084270_1_42355544.0, CM084264_1_69287336.0, CM084276_1_1856904.0, CM084270_1_35204451.1, CM084271_1_3818665.1, CM084264_1_34300372.1, CM084275_1_1304747.1, CM084270_1_4921106.0, CM084270_1_10495406.1, CM084271_1_43860497.1, CM084271_1_44091708.1, CM084265_1_72091635.1, CM084269_1_46733079.0, CM084266_1_70181797.1, CM084268_1_50679570.0, CM084269_1_39737155.0",30,"adapter_trim.F1-B8-pH8.bam",-0.24,"adapter_trim.F1-B1-pH8.bam",-0.35,0.59 +"39","adapter_trim.F2-J224-pH7.bam","CM084265_1_65233014.1, CM084267_1_2652774.0, CM084271_1_19655228.1, CM084274_1_43102349.1, CM084272_1_33617974.1, CM084272_1_33452045.0, CM084267_1_50392699.1, CM084265_1_60219092.1, CM084265_1_69913596.0, CM084273_1_4090291.1, CM084264_1_64874708.1, CM084277_1_10628425.1, CM084269_1_15818485.0, CM084276_1_1856094.0, CM084270_1_42355544.0, CM084264_1_69287336.0, CM084276_1_1856904.0, CM084270_1_35204451.1, CM084271_1_3818665.1, CM084264_1_34300372.1, CM084275_1_1304747.1, CM084270_1_4921106.0, CM084270_1_10495406.1, CM084271_1_43860497.1, CM084271_1_44091708.1, CM084265_1_72091635.1, CM084269_1_46733079.0, CM084266_1_70181797.1, CM084268_1_50679570.0, CM084269_1_39737155.0",30,"adapter_trim.F1-B20-pH8.bam",0.17,"adapter_trim.F1-B4-pH8.bam",0.08,0.25 +"40","adapter_trim.F2-J205-pH7.bam","CM084276_1_31737936.0, CM084275_1_35722051.0, CM084266_1_808035.0, CM084275_1_524596.1, CM084271_1_44190489.0, CM084266_1_70743731.1, CM084266_1_68643450.1, CM084272_1_2928852.1, CM084266_1_68200825.0, CM084265_1_71265328.0, CM084271_1_19655927.1, CM084266_1_69625521.0, CM084269_1_43525399.1, CM084266_1_57882817.1, CM084275_1_20000958.0, CM084264_1_73311149.1, CM084274_1_4773524.0, CM084266_1_68919260.1, CM084268_1_9292474.1, CM084267_1_9175849.0, CM084268_1_42089.1, CM084278_1_20695466.1, CM084265_1_65268038.1, CM084275_1_35722063.0, CM084270_1_4920904.0, CM084270_1_39395973.1, CM084266_1_71317540.0, CM084268_1_23612534.0, CM084279_1_32652116.0, CM084275_1_39774927.1",30,"adapter_trim.F1-B25-pH8.bam",-0.19,"adapter_trim.F1-B11-pH8.bam",-0.18,0.37 +"41","adapter_trim.F2-B4-pH7.bam","CM084267_1_6421422.1, CM084272_1_18191577.1, CM084271_1_3822736.1, CM084270_1_42355544.1, CM084273_1_31862797.0, CM084269_1_15823188.0, CM084265_1_61648709.1, CM084274_1_4795077.0, CM084267_1_2081904.0, CM084268_1_41971.1, CM084270_1_39395914.0, CM084265_1_72368258.0, CM084264_1_72075479.1, CM084275_1_1304702.0, CM084274_1_4778496.1, CM084266_1_65571765.1, CM084273_1_31862646.0, CM084271_1_7136506.0, CM084267_1_728194.1, CM084271_1_256574.1, CM084270_1_32126729.1, CM084266_1_71166449.1, CM084276_1_38558590.1, CM084272_1_23578669.0, CM084278_1_23542548.0, CM084274_1_4795468.0, CM084264_1_66077502.1, CM084267_1_51000174.0, CM084275_1_327911.0, CM084275_1_38995359.1",30,"adapter_trim.F1-B20-pH8.bam",-0.36,"adapter_trim.F1-B5-pH8.bam",-0.39,0.75 +"42","adapter_trim.F2-J221-pH7.bam","CM084264_1_73886234.0, CM084266_1_64726664.0, CM084265_1_66143673.1, CM084267_1_6420929.0, CM084270_1_47076365.0, CM084278_1_20742383.1, CM084265_1_59221213.0, CM084265_1_69381619.1, CM084276_1_12385340.0, CM084269_1_4625304.0, CM084269_1_46689554.1, CM084273_1_214008.0, CM084277_1_30168073.1, CM084272_1_33453618.1, CM084268_1_50225470.1, CM084278_1_32252678.0, CM084277_1_18545014.1, CM084272_1_18553651.0, CM084267_1_8687446.0, CM084269_1_15826462.1, CM084274_1_4694551.0, CM084274_1_4863996.1, CM084279_1_32640578.1, CM084268_1_49721922.0, CM084278_1_20734507.1, CM084271_1_44090328.1, CM084264_1_34294402.0, CM084276_1_1625272.0, CM084274_1_4694915.0, CM084265_1_71926735.0",30,"adapter_trim.F1-B20-pH8.bam",-0.01,"adapter_trim.F1-B9-pH8.bam",-0.08,0.09 +"43","adapter_trim.F2-J223-pH7.bam","CM084264_1_73886234.0, CM084266_1_64726664.0, CM084265_1_66143673.1, CM084267_1_6420929.0, CM084270_1_47076365.0, CM084278_1_20742383.1, CM084265_1_59221213.0, CM084265_1_69381619.1, CM084276_1_12385340.0, CM084269_1_4625304.0, CM084269_1_46689554.1, CM084273_1_214008.0, CM084277_1_30168073.1, CM084272_1_33453618.1, CM084268_1_50225470.1, CM084278_1_32252678.0, CM084277_1_18545014.1, CM084272_1_18553651.0, CM084267_1_8687446.0, CM084269_1_15826462.1, CM084274_1_4694551.0, CM084274_1_4863996.1, CM084279_1_32640578.1, CM084268_1_49721922.0, CM084278_1_20734507.1, CM084271_1_44090328.1, CM084264_1_34294402.0, CM084276_1_1625272.0, CM084274_1_4694915.0, CM084265_1_71926735.0",30,"adapter_trim.F1-B8-pH8.bam",0.14,"adapter_trim.F1-B11-pH8.bam",-0.08,0.22 +"44","adapter_trim.F2-J225-pH7.bam","CM084264_1_73886234.0, CM084266_1_64726664.0, CM084265_1_66143673.1, CM084267_1_6420929.0, CM084270_1_47076365.0, CM084278_1_20742383.1, CM084265_1_59221213.0, CM084265_1_69381619.1, CM084276_1_12385340.0, CM084269_1_4625304.0, CM084269_1_46689554.1, CM084273_1_214008.0, CM084277_1_30168073.1, CM084272_1_33453618.1, CM084268_1_50225470.1, CM084278_1_32252678.0, CM084277_1_18545014.1, CM084272_1_18553651.0, CM084267_1_8687446.0, CM084269_1_15826462.1, CM084274_1_4694551.0, CM084274_1_4863996.1, CM084279_1_32640578.1, CM084268_1_49721922.0, CM084278_1_20734507.1, CM084271_1_44090328.1, CM084264_1_34294402.0, CM084276_1_1625272.0, CM084274_1_4694915.0, CM084265_1_71926735.0",30,"adapter_trim.F1-B15-pH8.bam",-0.08,"adapter_trim.F1-B1-pH8.bam",-0.09,0.17 +"45","adapter_trim.F2-J165-pH7.bam","CM084279_1_32644251.0, CM084269_1_46745707.1, CM084265_1_72178237.0, CM084276_1_2855799.1, CM084268_1_46382.0, CM084278_1_279479.0, CM084276_1_20157071.0, CM084278_1_16773822.0, CM084265_1_58530104.0, CM084269_1_43525440.0, CM084269_1_43524168.0, CM084265_1_68808047.1, CM084276_1_38864870.0, CM084279_1_31409052.1, CM084274_1_4862958.0, CM084274_1_4695002.1, CM084266_1_62460034.0, CM084264_1_70174613.0, CM084272_1_41037487.0, CM084274_1_5028288.1, CM084269_1_46688909.1, CM084266_1_70706235.1, CM084265_1_71899241.0, CM084276_1_38539465.1, CM084270_1_47077588.0, CM084265_1_8361584.1, CM084264_1_66525866.1, CM084277_1_30611507.1, CM084268_1_2832731.1, CM084266_1_63468235.0",30,"adapter_trim.F1-B21-pH8.bam",-0.05,"adapter_trim.F1-B1-pH8.bam",-0.14,0.19 +"46","adapter_trim.F2-J166-pH7.bam","CM084279_1_32644251.0, CM084269_1_46745707.1, CM084265_1_72178237.0, CM084276_1_2855799.1, CM084268_1_46382.0, CM084278_1_279479.0, CM084276_1_20157071.0, CM084278_1_16773822.0, CM084265_1_58530104.0, CM084269_1_43525440.0, CM084269_1_43524168.0, CM084265_1_68808047.1, CM084276_1_38864870.0, CM084279_1_31409052.1, CM084274_1_4862958.0, CM084274_1_4695002.1, CM084266_1_62460034.0, CM084264_1_70174613.0, CM084272_1_41037487.0, CM084274_1_5028288.1, CM084269_1_46688909.1, CM084266_1_70706235.1, CM084265_1_71899241.0, CM084276_1_38539465.1, CM084270_1_47077588.0, CM084265_1_8361584.1, CM084264_1_66525866.1, CM084277_1_30611507.1, CM084268_1_2832731.1, CM084266_1_63468235.0",30,"adapter_trim.F1-B8-pH8.bam",-0.3,"adapter_trim.F1-B5-pH8.bam",-0.31,0.61 +"47","adapter_trim.F2-J184-pH7.bam","CM084279_1_32644251.0, CM084269_1_46745707.1, CM084265_1_72178237.0, CM084276_1_2855799.1, CM084268_1_46382.0, CM084278_1_279479.0, CM084276_1_20157071.0, CM084278_1_16773822.0, CM084265_1_58530104.0, CM084269_1_43525440.0, CM084269_1_43524168.0, CM084265_1_68808047.1, CM084276_1_38864870.0, CM084279_1_31409052.1, CM084274_1_4862958.0, CM084274_1_4695002.1, CM084266_1_62460034.0, CM084264_1_70174613.0, CM084272_1_41037487.0, CM084274_1_5028288.1, CM084269_1_46688909.1, CM084266_1_70706235.1, CM084265_1_71899241.0, CM084276_1_38539465.1, CM084270_1_47077588.0, CM084265_1_8361584.1, CM084264_1_66525866.1, CM084277_1_30611507.1, CM084268_1_2832731.1, CM084266_1_63468235.0",30,"adapter_trim.F1-B25-pH8.bam",-0.6,"adapter_trim.F1-B11-pH8.bam",-0.16,0.76 +"48","adapter_trim.F2-J189-pH7.bam","CM084279_1_32644251.0, CM084269_1_46745707.1, CM084265_1_72178237.0, CM084276_1_2855799.1, CM084268_1_46382.0, CM084278_1_279479.0, CM084276_1_20157071.0, CM084278_1_16773822.0, CM084265_1_58530104.0, CM084269_1_43525440.0, CM084269_1_43524168.0, CM084265_1_68808047.1, CM084276_1_38864870.0, CM084279_1_31409052.1, CM084274_1_4862958.0, CM084274_1_4695002.1, CM084266_1_62460034.0, CM084264_1_70174613.0, CM084272_1_41037487.0, CM084274_1_5028288.1, CM084269_1_46688909.1, CM084266_1_70706235.1, CM084265_1_71899241.0, CM084276_1_38539465.1, CM084270_1_47077588.0, CM084265_1_8361584.1, CM084264_1_66525866.1, CM084277_1_30611507.1, CM084268_1_2832731.1, CM084266_1_63468235.0",30,"adapter_trim.F1-B8-pH8.bam",-0.07,"adapter_trim.F1-B5-pH8.bam",-0.45,0.52 +"49","adapter_trim.F2-B10-pH7.bam","CM084279_1_32644251.0, CM084269_1_46745707.1, CM084265_1_72178237.0, CM084276_1_2855799.1, CM084268_1_46382.0, CM084278_1_279479.0, CM084276_1_20157071.0, CM084278_1_16773822.0, CM084265_1_58530104.0, CM084269_1_43525440.0, CM084269_1_43524168.0, CM084265_1_68808047.1, CM084276_1_38864870.0, CM084279_1_31409052.1, CM084274_1_4862958.0, CM084274_1_4695002.1, CM084266_1_62460034.0, CM084264_1_70174613.0, CM084272_1_41037487.0, CM084274_1_5028288.1, CM084269_1_46688909.1, CM084266_1_70706235.1, CM084265_1_71899241.0, CM084276_1_38539465.1, CM084270_1_47077588.0, CM084265_1_8361584.1, CM084264_1_66525866.1, CM084277_1_30611507.1, CM084268_1_2832731.1, CM084266_1_63468235.0",30,"adapter_trim.F1-B8-pH8.bam",-0.33,"adapter_trim.F1-B5-pH8.bam",-0.21,0.54 +"50","adapter_trim.F2-J205-pH7.bam","CM084266_1_69052205.1, CM084264_1_69757037.0, CM084266_1_57883008.0, CM084279_1_1062150.1, CM084268_1_282153.1, CM084268_1_28845782.0, CM084264_1_26771529.0, CM084264_1_26771521.1, CM084264_1_66525875.0, CM084264_1_8099096.1, CM084271_1_1034868.0, CM084275_1_327388.0, CM084271_1_43339301.1, CM084265_1_64735166.0, CM084274_1_4863175.0, CM084266_1_68919241.1, CM084264_1_64269859.1, CM084264_1_70471578.0, CM084266_1_70396245.1, CM084269_1_42862704.0, CM084274_1_3691337.1, CM084276_1_2855799.1, CM084270_1_8444572.1, CM084271_1_760000.1, CM084271_1_30532429.0, CM084274_1_4694263.0, CM084276_1_38970482.0, CM084266_1_69625503.0, CM084271_1_30532401.0, CM084279_1_31075821.1",30,"adapter_trim.F1-B8-pH8.bam",-0.05,"adapter_trim.F1-B5-pH8.bam",-0.25,0.3 +"51","adapter_trim.F2-J221-pH7.bam","CM084266_1_69052205.1, CM084264_1_69757037.0, CM084266_1_57883008.0, CM084279_1_1062150.1, CM084268_1_282153.1, CM084268_1_28845782.0, CM084264_1_26771529.0, CM084264_1_26771521.1, CM084264_1_66525875.0, CM084264_1_8099096.1, CM084271_1_1034868.0, CM084275_1_327388.0, CM084271_1_43339301.1, CM084265_1_64735166.0, CM084274_1_4863175.0, CM084266_1_68919241.1, CM084264_1_64269859.1, CM084264_1_70471578.0, CM084266_1_70396245.1, CM084269_1_42862704.0, CM084274_1_3691337.1, CM084276_1_2855799.1, CM084270_1_8444572.1, CM084271_1_760000.1, CM084271_1_30532429.0, CM084274_1_4694263.0, CM084276_1_38970482.0, CM084266_1_69625503.0, CM084271_1_30532401.0, CM084279_1_31075821.1",30,"adapter_trim.F1-B25-pH8.bam",0.06,"adapter_trim.F1-B4-pH8.bam",-0.28,0.34 +"52","adapter_trim.F2-B2-pH7.bam","CM084266_1_69052205.1, CM084264_1_69757037.0, CM084266_1_57883008.0, CM084279_1_1062150.1, CM084268_1_282153.1, CM084268_1_28845782.0, CM084264_1_26771529.0, CM084264_1_26771521.1, CM084264_1_66525875.0, CM084264_1_8099096.1, CM084271_1_1034868.0, CM084275_1_327388.0, CM084271_1_43339301.1, CM084265_1_64735166.0, CM084274_1_4863175.0, CM084266_1_68919241.1, CM084264_1_64269859.1, CM084264_1_70471578.0, CM084266_1_70396245.1, CM084269_1_42862704.0, CM084274_1_3691337.1, CM084276_1_2855799.1, CM084270_1_8444572.1, CM084271_1_760000.1, CM084271_1_30532429.0, CM084274_1_4694263.0, CM084276_1_38970482.0, CM084266_1_69625503.0, CM084271_1_30532401.0, CM084279_1_31075821.1",30,"adapter_trim.F1-B21-pH8.bam",-0.35,"adapter_trim.F1-B10-pH8.bam",0.03,0.38 +"53","adapter_trim.F2-J201-pH7.bam","CM084276_1_37916914.1, CM084271_1_3821125.1, CM084272_1_1704343.0, CM084274_1_4818355.0, CM084270_1_4751880.0, CM084271_1_43851366.1, CM084266_1_68320526.1, CM084274_1_4726244.0, CM084269_1_1556132.0, CM084272_1_18188802.0, CM084271_1_44228071.1, CM084264_1_74191538.0, CM084276_1_38558670.1, CM084265_1_70589365.1, CM084272_1_33597658.1, CM084272_1_18188624.1, CM084268_1_50225498.0, CM084276_1_714435.0, CM084278_1_23540735.1, CM084266_1_57889053.0, CM084279_1_32640576.0, CM084274_1_43102349.0, CM084265_1_68807639.0, CM084268_1_1508040.1, CM084264_1_8099096.1, CM084275_1_8878532.0, CM084273_1_31864457.1, CM084267_1_8687423.1, CM084265_1_70594980.1, CM084271_1_44075863.0",30,"adapter_trim.F1-B15-pH8.bam",-0.36,"adapter_trim.F1-B4-pH8.bam",-0.1,0.46 +"54","adapter_trim.F2-J203-pH7.bam","CM084276_1_37916914.1, CM084271_1_3821125.1, CM084272_1_1704343.0, CM084274_1_4818355.0, CM084270_1_4751880.0, CM084271_1_43851366.1, CM084266_1_68320526.1, CM084274_1_4726244.0, CM084269_1_1556132.0, CM084272_1_18188802.0, CM084271_1_44228071.1, CM084264_1_74191538.0, CM084276_1_38558670.1, CM084265_1_70589365.1, CM084272_1_33597658.1, CM084272_1_18188624.1, CM084268_1_50225498.0, CM084276_1_714435.0, CM084278_1_23540735.1, CM084266_1_57889053.0, CM084279_1_32640576.0, CM084274_1_43102349.0, CM084265_1_68807639.0, CM084268_1_1508040.1, CM084264_1_8099096.1, CM084275_1_8878532.0, CM084273_1_31864457.1, CM084267_1_8687423.1, CM084265_1_70594980.1, CM084271_1_44075863.0",30,"adapter_trim.F1-B8-pH8.bam",-0.07,"adapter_trim.F1-B1-pH8.bam",-0.24,0.31 +"55","adapter_trim.F2-J185-pH7.bam","CM084264_1_69534058.1, CM084268_1_9292468.1, CM084278_1_20701460.1, CM084272_1_1144109.1, CM084265_1_71925452.1, CM084268_1_18512752.1, CM084264_1_70471577.0, CM084264_1_6517652.1, CM084276_1_7202888.1, CM084265_1_58483282.0, CM084272_1_18194979.0, CM084271_1_274110.0, CM084267_1_6421491.0, CM084264_1_34294397.1, CM084266_1_68919215.0, CM084272_1_41037487.1, CM084264_1_34301190.0, CM084274_1_4792243.0, CM084265_1_69381534.0, CM084275_1_35717367.0, CM084269_1_46693817.0, CM084269_1_45420488.1, CM084269_1_42862695.1, CM084271_1_1052214.1, CM084276_1_7202997.0, CM084267_1_11257260.1, CM084269_1_1577711.0, CM084266_1_67239927.1, CM084274_1_43090783.1, CM084266_1_59802412.0",30,"adapter_trim.F1-B15-pH8.bam",0.04,"adapter_trim.F1-B3-pH8.bam",-0.08,0.12 +"56","adapter_trim.F2-J204-pH7.bam","CM084264_1_69534058.1, CM084268_1_9292468.1, CM084278_1_20701460.1, CM084272_1_1144109.1, CM084265_1_71925452.1, CM084268_1_18512752.1, CM084264_1_70471577.0, CM084264_1_6517652.1, CM084276_1_7202888.1, CM084265_1_58483282.0, CM084272_1_18194979.0, CM084271_1_274110.0, CM084267_1_6421491.0, CM084264_1_34294397.1, CM084266_1_68919215.0, CM084272_1_41037487.1, CM084264_1_34301190.0, CM084274_1_4792243.0, CM084265_1_69381534.0, CM084275_1_35717367.0, CM084269_1_46693817.0, CM084269_1_45420488.1, CM084269_1_42862695.1, CM084271_1_1052214.1, CM084276_1_7202997.0, CM084267_1_11257260.1, CM084269_1_1577711.0, CM084266_1_67239927.1, CM084274_1_43090783.1, CM084266_1_59802412.0",30,"adapter_trim.F1-B15-pH8.bam",-0.14,"adapter_trim.F1-B11-pH8.bam",-0.02,0.16 +"57","adapter_trim.F2-J224-pH7.bam","CM084264_1_69534058.1, CM084268_1_9292468.1, CM084278_1_20701460.1, CM084272_1_1144109.1, CM084265_1_71925452.1, CM084268_1_18512752.1, CM084264_1_70471577.0, CM084264_1_6517652.1, CM084276_1_7202888.1, CM084265_1_58483282.0, CM084272_1_18194979.0, CM084271_1_274110.0, CM084267_1_6421491.0, CM084264_1_34294397.1, CM084266_1_68919215.0, CM084272_1_41037487.1, CM084264_1_34301190.0, CM084274_1_4792243.0, CM084265_1_69381534.0, CM084275_1_35717367.0, CM084269_1_46693817.0, CM084269_1_45420488.1, CM084269_1_42862695.1, CM084271_1_1052214.1, CM084276_1_7202997.0, CM084267_1_11257260.1, CM084269_1_1577711.0, CM084266_1_67239927.1, CM084274_1_43090783.1, CM084266_1_59802412.0",30,"adapter_trim.F1-B15-pH8.bam",0.05,"adapter_trim.F1-B8-pH8.bam",0.05,0.1 +"58","adapter_trim.F2-B4-pH7.bam","CM084264_1_69534058.1, CM084268_1_9292468.1, CM084278_1_20701460.1, CM084272_1_1144109.1, CM084265_1_71925452.1, CM084268_1_18512752.1, CM084264_1_70471577.0, CM084264_1_6517652.1, CM084276_1_7202888.1, CM084265_1_58483282.0, CM084272_1_18194979.0, CM084271_1_274110.0, CM084267_1_6421491.0, CM084264_1_34294397.1, CM084266_1_68919215.0, CM084272_1_41037487.1, CM084264_1_34301190.0, CM084274_1_4792243.0, CM084265_1_69381534.0, CM084275_1_35717367.0, CM084269_1_46693817.0, CM084269_1_45420488.1, CM084269_1_42862695.1, CM084271_1_1052214.1, CM084276_1_7202997.0, CM084267_1_11257260.1, CM084269_1_1577711.0, CM084266_1_67239927.1, CM084274_1_43090783.1, CM084266_1_59802412.0",30,"adapter_trim.F1-B15-pH8.bam",0.03,"adapter_trim.F1-B4-pH8.bam",-0.19,0.22 +"59","adapter_trim.F2-B8-pH7.bam","CM084264_1_69534058.1, CM084268_1_9292468.1, CM084278_1_20701460.1, CM084272_1_1144109.1, CM084265_1_71925452.1, CM084268_1_18512752.1, CM084264_1_70471577.0, CM084264_1_6517652.1, CM084276_1_7202888.1, CM084265_1_58483282.0, CM084272_1_18194979.0, CM084271_1_274110.0, CM084267_1_6421491.0, CM084264_1_34294397.1, CM084266_1_68919215.0, CM084272_1_41037487.1, CM084264_1_34301190.0, CM084274_1_4792243.0, CM084265_1_69381534.0, CM084275_1_35717367.0, CM084269_1_46693817.0, CM084269_1_45420488.1, CM084269_1_42862695.1, CM084271_1_1052214.1, CM084276_1_7202997.0, CM084267_1_11257260.1, CM084269_1_1577711.0, CM084266_1_67239927.1, CM084274_1_43090783.1, CM084266_1_59802412.0",30,"adapter_trim.F1-B21-pH8.bam",-0.09,"adapter_trim.F1-B3-pH8.bam",-0.16,0.25 +"60","adapter_trim.F2-J203-pH7.bam","CM084279_1_10149611.0, CM084269_1_4628639.1, CM084271_1_344493.0, CM084269_1_43524168.1, CM084266_1_71160169.0, CM084268_1_46382.1, CM084264_1_6990362.1, CM084264_1_70174663.0, CM084269_1_15827759.0, CM084276_1_1625243.0, CM084265_1_790976.0, CM084265_1_1062091.1, CM084265_1_73060616.1, CM084265_1_70977429.0, CM084271_1_3819548.0, CM084264_1_48147317.1, CM084277_1_30631457.1, CM084277_1_30635514.0, CM084271_1_26325720.0, CM084274_1_4863996.1, CM084266_1_58087775.0, CM084267_1_52112064.1, CM084264_1_73152605.1, CM084270_1_4751853.0, CM084279_1_32652116.1, CM084273_1_42253133.1, CM084276_1_38787723.0, CM084265_1_69007607.1, CM084269_1_1556175.1, CM084276_1_38559646.0",30,"adapter_trim.F1-B25-pH8.bam",-0.26,"adapter_trim.F1-B1-pH8.bam",-0.22,0.48 +"61","adapter_trim.F2-J205-pH7.bam","CM084279_1_10149611.0, CM084269_1_4628639.1, CM084271_1_344493.0, CM084269_1_43524168.1, CM084266_1_71160169.0, CM084268_1_46382.1, CM084264_1_6990362.1, CM084264_1_70174663.0, CM084269_1_15827759.0, CM084276_1_1625243.0, CM084265_1_790976.0, CM084265_1_1062091.1, CM084265_1_73060616.1, CM084265_1_70977429.0, CM084271_1_3819548.0, CM084264_1_48147317.1, CM084277_1_30631457.1, CM084277_1_30635514.0, CM084271_1_26325720.0, CM084274_1_4863996.1, CM084266_1_58087775.0, CM084267_1_52112064.1, CM084264_1_73152605.1, CM084270_1_4751853.0, CM084279_1_32652116.1, CM084273_1_42253133.1, CM084276_1_38787723.0, CM084265_1_69007607.1, CM084269_1_1556175.1, CM084276_1_38559646.0",30,"adapter_trim.F1-B21-pH8.bam",-0.22,"adapter_trim.F1-B9-pH8.bam",-0.19,0.41 +"62","adapter_trim.F2-J166-pH7.bam","CM084276_1_20157325.1, CM084266_1_71148884.1, CM084265_1_58487818.0, CM084279_1_32666441.1, CM084275_1_524594.0, CM084271_1_3820382.0, CM084272_1_1891499.1, CM084275_1_25395464.1, CM084265_1_1118730.1, CM084277_1_17835716.0, CM084276_1_1625292.0, CM084275_1_25388559.1, CM084265_1_71926735.1, CM084268_1_50224886.1, CM084275_1_25395480.0, CM084264_1_70173624.1, CM084267_1_9176202.1, CM084278_1_20732798.0, CM084276_1_38539465.0, CM084275_1_39780958.0, CM084271_1_43868189.0, CM084271_1_340905.1, CM084276_1_37352422.1, CM084271_1_26325707.0, CM084268_1_276380.1, CM084267_1_699449.0, CM084278_1_20625152.1, CM084269_1_4625304.1, CM084265_1_72991915.1, CM084276_1_60278.0",30,"adapter_trim.F1-B25-pH8.bam",-0.25,"adapter_trim.F1-B5-pH8.bam",-0.55,0.8 +"63","adapter_trim.F2-J185-pH7.bam","CM084276_1_20157325.1, CM084266_1_71148884.1, CM084265_1_58487818.0, CM084279_1_32666441.1, CM084275_1_524594.0, CM084271_1_3820382.0, CM084272_1_1891499.1, CM084275_1_25395464.1, CM084265_1_1118730.1, CM084277_1_17835716.0, CM084276_1_1625292.0, CM084275_1_25388559.1, CM084265_1_71926735.1, CM084268_1_50224886.1, CM084275_1_25395480.0, CM084264_1_70173624.1, CM084267_1_9176202.1, CM084278_1_20732798.0, CM084276_1_38539465.0, CM084275_1_39780958.0, CM084271_1_43868189.0, CM084271_1_340905.1, CM084276_1_37352422.1, CM084271_1_26325707.0, CM084268_1_276380.1, CM084267_1_699449.0, CM084278_1_20625152.1, CM084269_1_4625304.1, CM084265_1_72991915.1, CM084276_1_60278.0",30,"adapter_trim.F1-B25-pH8.bam",-0.1,"adapter_trim.F1-B11-pH8.bam",0.06,0.16 +"64","adapter_trim.F2-J203-pH7.bam","CM084276_1_20157325.1, CM084266_1_71148884.1, CM084265_1_58487818.0, CM084279_1_32666441.1, CM084275_1_524594.0, CM084271_1_3820382.0, CM084272_1_1891499.1, CM084275_1_25395464.1, CM084265_1_1118730.1, CM084277_1_17835716.0, CM084276_1_1625292.0, CM084275_1_25388559.1, CM084265_1_71926735.1, CM084268_1_50224886.1, CM084275_1_25395480.0, CM084264_1_70173624.1, CM084267_1_9176202.1, CM084278_1_20732798.0, CM084276_1_38539465.0, CM084275_1_39780958.0, CM084271_1_43868189.0, CM084271_1_340905.1, CM084276_1_37352422.1, CM084271_1_26325707.0, CM084268_1_276380.1, CM084267_1_699449.0, CM084278_1_20625152.1, CM084269_1_4625304.1, CM084265_1_72991915.1, CM084276_1_60278.0",30,"adapter_trim.F1-B25-pH8.bam",-0.51,"adapter_trim.F1-B3-pH8.bam",-0.53,1.04 +"65","adapter_trim.F2-B4-pH7.bam","CM084276_1_20157325.1, CM084266_1_71148884.1, CM084265_1_58487818.0, CM084279_1_32666441.1, CM084275_1_524594.0, CM084271_1_3820382.0, CM084272_1_1891499.1, CM084275_1_25395464.1, CM084265_1_1118730.1, CM084277_1_17835716.0, CM084276_1_1625292.0, CM084275_1_25388559.1, CM084265_1_71926735.1, CM084268_1_50224886.1, CM084275_1_25395480.0, CM084264_1_70173624.1, CM084267_1_9176202.1, CM084278_1_20732798.0, CM084276_1_38539465.0, CM084275_1_39780958.0, CM084271_1_43868189.0, CM084271_1_340905.1, CM084276_1_37352422.1, CM084271_1_26325707.0, CM084268_1_276380.1, CM084267_1_699449.0, CM084278_1_20625152.1, CM084269_1_4625304.1, CM084265_1_72991915.1, CM084276_1_60278.0",30,"adapter_trim.F1-B21-pH8.bam",-0.23,"adapter_trim.F1-B1-pH8.bam",-0.59,0.82 +"66","adapter_trim.F2-J204-pH7.bam","CM084267_1_13261500.0, CM084265_1_71826461.0, CM084269_1_1555101.1, CM084271_1_44086139.0, CM084279_1_32665186.0, CM084276_1_37353202.0, CM084269_1_43523893.0, CM084275_1_29098877.0, CM084265_1_50947034.1, CM084273_1_31866838.1, CM084268_1_50693767.1, CM084266_1_65401967.1, CM084276_1_4855640.0, CM084265_1_8361562.1, CM084274_1_34977142.1, CM084269_1_39737144.0, CM084269_1_40438751.1, CM084275_1_120808.1, CM084265_1_58036225.0, CM084277_1_30953064.0, CM084277_1_4875753.0, CM084269_1_47563826.0, CM084264_1_70210134.0, CM084265_1_68789108.1, CM084267_1_956424.1, CM084268_1_28845509.0, CM084265_1_72368245.0, CM084269_1_42862695.1, CM084274_1_4870391.1, CM084269_1_43525214.0",30,"adapter_trim.F1-B20-pH8.bam",0.03,"adapter_trim.F1-B7-pH8.bam",-0.26,0.29 +"67","adapter_trim.F2-J221-pH7.bam","CM084267_1_13261500.0, CM084265_1_71826461.0, CM084269_1_1555101.1, CM084271_1_44086139.0, CM084279_1_32665186.0, CM084276_1_37353202.0, CM084269_1_43523893.0, CM084275_1_29098877.0, CM084265_1_50947034.1, CM084273_1_31866838.1, CM084268_1_50693767.1, CM084266_1_65401967.1, CM084276_1_4855640.0, CM084265_1_8361562.1, CM084274_1_34977142.1, CM084269_1_39737144.0, CM084269_1_40438751.1, CM084275_1_120808.1, CM084265_1_58036225.0, CM084277_1_30953064.0, CM084277_1_4875753.0, CM084269_1_47563826.0, CM084264_1_70210134.0, CM084265_1_68789108.1, CM084267_1_956424.1, CM084268_1_28845509.0, CM084265_1_72368245.0, CM084269_1_42862695.1, CM084274_1_4870391.1, CM084269_1_43525214.0",30,"adapter_trim.F1-B20-pH8.bam",-0.05,"adapter_trim.F1-B9-pH8.bam",-0.17,0.22 +"68","adapter_trim.F2-J224-pH7.bam","CM084267_1_13261500.0, CM084265_1_71826461.0, CM084269_1_1555101.1, CM084271_1_44086139.0, CM084279_1_32665186.0, CM084276_1_37353202.0, CM084269_1_43523893.0, CM084275_1_29098877.0, CM084265_1_50947034.1, CM084273_1_31866838.1, CM084268_1_50693767.1, CM084266_1_65401967.1, CM084276_1_4855640.0, CM084265_1_8361562.1, CM084274_1_34977142.1, CM084269_1_39737144.0, CM084269_1_40438751.1, CM084275_1_120808.1, CM084265_1_58036225.0, CM084277_1_30953064.0, CM084277_1_4875753.0, CM084269_1_47563826.0, CM084264_1_70210134.0, CM084265_1_68789108.1, CM084267_1_956424.1, CM084268_1_28845509.0, CM084265_1_72368245.0, CM084269_1_42862695.1, CM084274_1_4870391.1, CM084269_1_43525214.0",30,"adapter_trim.F1-B21-pH8.bam",-0.26,"adapter_trim.F1-B1-pH8.bam",-0.19,0.45 +"69","adapter_trim.F2-J166-pH7.bam","CM084272_1_11675265.0, CM084264_1_2740137.1, CM084265_1_59221155.1, CM084265_1_64733395.1, CM084276_1_2855903.0, CM084274_1_4709671.1, CM084276_1_38558458.1, CM084274_1_4796884.0, CM084269_1_1556267.0, CM084276_1_7202888.0, CM084270_1_8244653.1, CM084276_1_62221.1, CM084272_1_36474233.1, CM084274_1_4869924.0, CM084265_1_1816578.1, CM084275_1_35722063.1, CM084271_1_30532429.1, CM084265_1_71925203.0, CM084264_1_34297313.1, CM084268_1_42008.0, CM084268_1_2832742.0, CM084272_1_33571757.1, CM084275_1_39491731.1, CM084264_1_64874049.0, CM084267_1_699428.1, CM084266_1_69051080.1, CM084271_1_342830.0, CM084264_1_65945.1, CM084274_1_4864753.0, CM084276_1_38450614.0",30,"adapter_trim.F1-B15-pH8.bam",-0.02,"adapter_trim.F1-B3-pH8.bam",-0.19,0.21 +"70","adapter_trim.F2-J185-pH7.bam","CM084272_1_11675265.0, CM084264_1_2740137.1, CM084265_1_59221155.1, CM084265_1_64733395.1, CM084276_1_2855903.0, CM084274_1_4709671.1, CM084276_1_38558458.1, CM084274_1_4796884.0, CM084269_1_1556267.0, CM084276_1_7202888.0, CM084270_1_8244653.1, CM084276_1_62221.1, CM084272_1_36474233.1, CM084274_1_4869924.0, CM084265_1_1816578.1, CM084275_1_35722063.1, CM084271_1_30532429.1, CM084265_1_71925203.0, CM084264_1_34297313.1, CM084268_1_42008.0, CM084268_1_2832742.0, CM084272_1_33571757.1, CM084275_1_39491731.1, CM084264_1_64874049.0, CM084267_1_699428.1, CM084266_1_69051080.1, CM084271_1_342830.0, CM084264_1_65945.1, CM084274_1_4864753.0, CM084276_1_38450614.0",30,"adapter_trim.F1-B21-pH8.bam",-0.57,"adapter_trim.F1-B3-pH8.bam",-0.15,0.72 +"71","adapter_trim.F2-J189-pH7.bam","CM084272_1_11675265.0, CM084264_1_2740137.1, CM084265_1_59221155.1, CM084265_1_64733395.1, CM084276_1_2855903.0, CM084274_1_4709671.1, CM084276_1_38558458.1, CM084274_1_4796884.0, CM084269_1_1556267.0, CM084276_1_7202888.0, CM084270_1_8244653.1, CM084276_1_62221.1, CM084272_1_36474233.1, CM084274_1_4869924.0, CM084265_1_1816578.1, CM084275_1_35722063.1, CM084271_1_30532429.1, CM084265_1_71925203.0, CM084264_1_34297313.1, CM084268_1_42008.0, CM084268_1_2832742.0, CM084272_1_33571757.1, CM084275_1_39491731.1, CM084264_1_64874049.0, CM084267_1_699428.1, CM084266_1_69051080.1, CM084271_1_342830.0, CM084264_1_65945.1, CM084274_1_4864753.0, CM084276_1_38450614.0",30,"adapter_trim.F1-B21-pH8.bam",-0.49,"adapter_trim.F1-B3-pH8.bam",-0.16,0.65 +"72","adapter_trim.F2-J203-pH7.bam","CM084272_1_11675265.0, CM084264_1_2740137.1, CM084265_1_59221155.1, CM084265_1_64733395.1, CM084276_1_2855903.0, CM084274_1_4709671.1, CM084276_1_38558458.1, CM084274_1_4796884.0, CM084269_1_1556267.0, CM084276_1_7202888.0, CM084270_1_8244653.1, CM084276_1_62221.1, CM084272_1_36474233.1, CM084274_1_4869924.0, CM084265_1_1816578.1, CM084275_1_35722063.1, CM084271_1_30532429.1, CM084265_1_71925203.0, CM084264_1_34297313.1, CM084268_1_42008.0, CM084268_1_2832742.0, CM084272_1_33571757.1, CM084275_1_39491731.1, CM084264_1_64874049.0, CM084267_1_699428.1, CM084266_1_69051080.1, CM084271_1_342830.0, CM084264_1_65945.1, CM084274_1_4864753.0, CM084276_1_38450614.0",30,"adapter_trim.F1-B20-pH8.bam",-0.03,"adapter_trim.F1-B1-pH8.bam",-0.36,0.39 +"73","adapter_trim.F2-J225-pH7.bam","CM084272_1_11675265.0, CM084264_1_2740137.1, CM084265_1_59221155.1, CM084265_1_64733395.1, CM084276_1_2855903.0, CM084274_1_4709671.1, CM084276_1_38558458.1, CM084274_1_4796884.0, CM084269_1_1556267.0, CM084276_1_7202888.0, CM084270_1_8244653.1, CM084276_1_62221.1, CM084272_1_36474233.1, CM084274_1_4869924.0, CM084265_1_1816578.1, CM084275_1_35722063.1, CM084271_1_30532429.1, CM084265_1_71925203.0, CM084264_1_34297313.1, CM084268_1_42008.0, CM084268_1_2832742.0, CM084272_1_33571757.1, CM084275_1_39491731.1, CM084264_1_64874049.0, CM084267_1_699428.1, CM084266_1_69051080.1, CM084271_1_342830.0, CM084264_1_65945.1, CM084274_1_4864753.0, CM084276_1_38450614.0",30,"adapter_trim.F1-B15-pH8.bam",-0.1,"adapter_trim.F1-B1-pH8.bam",-0.05,0.15 +"74","adapter_trim.F2-J165-pH7.bam","CM084266_1_68643450.1, CM084266_1_69632417.1, CM084272_1_2072764.1, CM084272_1_33607000.0, CM084266_1_68319477.0, CM084269_1_39736991.0, CM084273_1_7826703.1, CM084273_1_31862476.1, CM084264_1_72117233.1, CM084264_1_72118711.1, CM084279_1_1070264.1, CM084274_1_4796871.0, CM084266_1_71160177.0, CM084265_1_8362505.1, CM084270_1_42355495.0, CM084266_1_71224927.1, CM084267_1_5161043.0, CM084264_1_75506833.1, CM084271_1_19655820.0, CM084265_1_69004202.0, CM084271_1_337322.0, CM084266_1_69085566.0, CM084271_1_1033937.1, CM084274_1_4795112.0, CM084278_1_14913766.0, CM084272_1_2072734.1, CM084274_1_4862958.0, CM084278_1_23541775.1, CM084272_1_1307854.0, CM084266_1_62460034.1",30,"adapter_trim.F1-B20-pH8.bam",-0.34,"adapter_trim.F1-B1-pH8.bam",-0.16,0.5 +"75","adapter_trim.F2-J185-pH7.bam","CM084266_1_68643450.1, CM084266_1_69632417.1, CM084272_1_2072764.1, CM084272_1_33607000.0, CM084266_1_68319477.0, CM084269_1_39736991.0, CM084273_1_7826703.1, CM084273_1_31862476.1, CM084264_1_72117233.1, CM084264_1_72118711.1, CM084279_1_1070264.1, CM084274_1_4796871.0, CM084266_1_71160177.0, CM084265_1_8362505.1, CM084270_1_42355495.0, CM084266_1_71224927.1, CM084267_1_5161043.0, CM084264_1_75506833.1, CM084271_1_19655820.0, CM084265_1_69004202.0, CM084271_1_337322.0, CM084266_1_69085566.0, CM084271_1_1033937.1, CM084274_1_4795112.0, CM084278_1_14913766.0, CM084272_1_2072734.1, CM084274_1_4862958.0, CM084278_1_23541775.1, CM084272_1_1307854.0, CM084266_1_62460034.1",30,"adapter_trim.F1-B20-pH8.bam",0.02,"adapter_trim.F1-B1-pH8.bam",0,0.02 +"76","adapter_trim.F2-J221-pH7.bam","CM084266_1_68643450.1, CM084266_1_69632417.1, CM084272_1_2072764.1, CM084272_1_33607000.0, CM084266_1_68319477.0, CM084269_1_39736991.0, CM084273_1_7826703.1, CM084273_1_31862476.1, CM084264_1_72117233.1, CM084264_1_72118711.1, CM084279_1_1070264.1, CM084274_1_4796871.0, CM084266_1_71160177.0, CM084265_1_8362505.1, CM084270_1_42355495.0, CM084266_1_71224927.1, CM084267_1_5161043.0, CM084264_1_75506833.1, CM084271_1_19655820.0, CM084265_1_69004202.0, CM084271_1_337322.0, CM084266_1_69085566.0, CM084271_1_1033937.1, CM084274_1_4795112.0, CM084278_1_14913766.0, CM084272_1_2072734.1, CM084274_1_4862958.0, CM084278_1_23541775.1, CM084272_1_1307854.0, CM084266_1_62460034.1",30,"adapter_trim.F1-B20-pH8.bam",-0.16,"adapter_trim.F1-B1-pH8.bam",-0.32,0.48 +"77","adapter_trim.F2-J203-pH7.bam","CM084268_1_50681662.1, CM084279_1_10159275.0, CM084265_1_72926026.0, CM084269_1_42862716.0, CM084266_1_62460055.0, CM084278_1_20635947.0, CM084264_1_69271981.0, CM084268_1_45574.1, CM084266_1_68515581.0, CM084265_1_68073022.1, CM084269_1_15827788.1, CM084265_1_68869496.0, CM084273_1_7839324.0, CM084265_1_70799357.1, CM084278_1_16774023.1, CM084264_1_65945.0, CM084279_1_1196450.0, CM084279_1_32640566.1, CM084264_1_2740287.0, CM084272_1_1311984.1, CM084265_1_71794141.0, CM084276_1_38287449.0, CM084269_1_1541112.1, CM084271_1_218855.0, CM084266_1_59802412.0, CM084269_1_1580179.0, CM084265_1_64586069.1, CM084265_1_71925442.1, CM084266_1_69141117.1, CM084271_1_44228071.1",30,"adapter_trim.F1-B8-pH8.bam",-0.43,"adapter_trim.F1-B3-pH8.bam",0.06,0.49 +"78","adapter_trim.F2-B10-pH7.bam","CM084268_1_50681662.1, CM084279_1_10159275.0, CM084265_1_72926026.0, CM084269_1_42862716.0, CM084266_1_62460055.0, CM084278_1_20635947.0, CM084264_1_69271981.0, CM084268_1_45574.1, CM084266_1_68515581.0, CM084265_1_68073022.1, CM084269_1_15827788.1, CM084265_1_68869496.0, CM084273_1_7839324.0, CM084265_1_70799357.1, CM084278_1_16774023.1, CM084264_1_65945.0, CM084279_1_1196450.0, CM084279_1_32640566.1, CM084264_1_2740287.0, CM084272_1_1311984.1, CM084265_1_71794141.0, CM084276_1_38287449.0, CM084269_1_1541112.1, CM084271_1_218855.0, CM084266_1_59802412.0, CM084269_1_1580179.0, CM084265_1_64586069.1, CM084265_1_71925442.1, CM084266_1_69141117.1, CM084271_1_44228071.1",30,"adapter_trim.F1-B21-pH8.bam",-0.19,"adapter_trim.F1-B1-pH8.bam",-0.21,0.4 +"79","adapter_trim.F2-B15-pH7.bam","CM084268_1_50681662.1, CM084279_1_10159275.0, CM084265_1_72926026.0, CM084269_1_42862716.0, CM084266_1_62460055.0, CM084278_1_20635947.0, CM084264_1_69271981.0, CM084268_1_45574.1, CM084266_1_68515581.0, CM084265_1_68073022.1, CM084269_1_15827788.1, CM084265_1_68869496.0, CM084273_1_7839324.0, CM084265_1_70799357.1, CM084278_1_16774023.1, CM084264_1_65945.0, CM084279_1_1196450.0, CM084279_1_32640566.1, CM084264_1_2740287.0, CM084272_1_1311984.1, CM084265_1_71794141.0, CM084276_1_38287449.0, CM084269_1_1541112.1, CM084271_1_218855.0, CM084266_1_59802412.0, CM084269_1_1580179.0, CM084265_1_64586069.1, CM084265_1_71925442.1, CM084266_1_69141117.1, CM084271_1_44228071.1",30,"adapter_trim.F1-B15-pH8.bam",-0.45,"adapter_trim.F1-B9-pH8.bam",-0.98,1.43 +"80","adapter_trim.F2-B4-pH7.bam","CM084268_1_50681662.1, CM084279_1_10159275.0, CM084265_1_72926026.0, CM084269_1_42862716.0, CM084266_1_62460055.0, CM084278_1_20635947.0, CM084264_1_69271981.0, CM084268_1_45574.1, CM084266_1_68515581.0, CM084265_1_68073022.1, CM084269_1_15827788.1, CM084265_1_68869496.0, CM084273_1_7839324.0, CM084265_1_70799357.1, CM084278_1_16774023.1, CM084264_1_65945.0, CM084279_1_1196450.0, CM084279_1_32640566.1, CM084264_1_2740287.0, CM084272_1_1311984.1, CM084265_1_71794141.0, CM084276_1_38287449.0, CM084269_1_1541112.1, CM084271_1_218855.0, CM084266_1_59802412.0, CM084269_1_1580179.0, CM084265_1_64586069.1, CM084265_1_71925442.1, CM084266_1_69141117.1, CM084271_1_44228071.1",30,"adapter_trim.F1-B21-pH8.bam",-0.53,"adapter_trim.F1-B1-pH8.bam",-0.37,0.9 +"81","adapter_trim.F2-J162-pH7.bam","CM084275_1_39394589.1, CM084269_1_43528550.0, CM084265_1_71899680.1, CM084266_1_62460100.0, CM084271_1_44083919.1, CM084264_1_61227544.1, CM084273_1_42253133.0, CM084274_1_4778747.0, CM084279_1_10147315.1, CM084275_1_39420927.0, CM084268_1_28845446.0, CM084275_1_36059252.1, CM084265_1_59221301.0, CM084271_1_30532401.1, CM084276_1_4238124.0, CM084270_1_42355508.0, CM084271_1_19934424.0, CM084269_1_43528587.0, CM084278_1_31960635.1, CM084271_1_43934352.0, CM084269_1_1577700.1, CM084274_1_42293378.0, CM084268_1_24031408.1, CM084268_1_24031433.1, CM084276_1_4238165.1, CM084268_1_3704020.1, CM084266_1_67736800.1, CM084271_1_44228071.1, CM084268_1_50681662.0, CM084271_1_3819548.1",30,"adapter_trim.F1-B8-pH8.bam",-0.2,"adapter_trim.F1-B9-pH8.bam",-0.54,0.74 +"82","adapter_trim.F2-J205-pH7.bam","CM084275_1_39394589.1, CM084269_1_43528550.0, CM084265_1_71899680.1, CM084266_1_62460100.0, CM084271_1_44083919.1, CM084264_1_61227544.1, CM084273_1_42253133.0, CM084274_1_4778747.0, CM084279_1_10147315.1, CM084275_1_39420927.0, CM084268_1_28845446.0, CM084275_1_36059252.1, CM084265_1_59221301.0, CM084271_1_30532401.1, CM084276_1_4238124.0, CM084270_1_42355508.0, CM084271_1_19934424.0, CM084269_1_43528587.0, CM084278_1_31960635.1, CM084271_1_43934352.0, CM084269_1_1577700.1, CM084274_1_42293378.0, CM084268_1_24031408.1, CM084268_1_24031433.1, CM084276_1_4238165.1, CM084268_1_3704020.1, CM084266_1_67736800.1, CM084271_1_44228071.1, CM084268_1_50681662.0, CM084271_1_3819548.1",30,"adapter_trim.F1-B15-pH8.bam",0.07,"adapter_trim.F1-B9-pH8.bam",-0.27,0.34 +"83","adapter_trim.F2-J164-pH7.bam","CM084274_1_4778747.1, CM084279_1_10151169.1, CM084274_1_4863872.0, CM084264_1_70173621.1, CM084272_1_43469487.1, CM084272_1_7002400.0, CM084265_1_1062071.1, CM084278_1_22667297.1, CM084275_1_38995254.0, CM084271_1_30532519.0, CM084276_1_38287449.1, CM084268_1_18512752.0, CM084277_1_30027552.0, CM084269_1_45420483.1, CM084265_1_64586070.1, CM084266_1_57888640.0, CM084276_1_2841296.1, CM084271_1_10301903.1, CM084279_1_32652220.0, CM084275_1_1304702.0, CM084275_1_23104495.0, CM084271_1_26332979.1, CM084279_1_1062135.0, CM084265_1_64585921.0, CM084269_1_41823136.1, CM084266_1_69315499.1, CM084272_1_1596808.1, CM084264_1_74989681.1, CM084264_1_73927178.0, CM084275_1_675783.0",30,"adapter_trim.F1-B25-pH8.bam",0.05,"adapter_trim.F1-B8-pH8.bam",0.21,0.26 +"84","adapter_trim.F2-J227-pH7.bam","CM084274_1_4778747.1, CM084279_1_10151169.1, CM084274_1_4863872.0, CM084264_1_70173621.1, CM084272_1_43469487.1, CM084272_1_7002400.0, CM084265_1_1062071.1, CM084278_1_22667297.1, CM084275_1_38995254.0, CM084271_1_30532519.0, CM084276_1_38287449.1, CM084268_1_18512752.0, CM084277_1_30027552.0, CM084269_1_45420483.1, CM084265_1_64586070.1, CM084266_1_57888640.0, CM084276_1_2841296.1, CM084271_1_10301903.1, CM084279_1_32652220.0, CM084275_1_1304702.0, CM084275_1_23104495.0, CM084271_1_26332979.1, CM084279_1_1062135.0, CM084265_1_64585921.0, CM084269_1_41823136.1, CM084266_1_69315499.1, CM084272_1_1596808.1, CM084264_1_74989681.1, CM084264_1_73927178.0, CM084275_1_675783.0",30,"adapter_trim.F1-B25-pH8.bam",-0.3,"adapter_trim.F1-B1-pH8.bam",0.08,0.38 +"85","adapter_trim.F2-J166-pH7.bam","CM084275_1_42592955.0, CM084269_1_43525440.1, CM084267_1_2910813.0, CM084268_1_28845439.0, CM084268_1_24031315.1, CM084265_1_69381551.0, CM084267_1_2165108.0, CM084271_1_39685141.0, CM084275_1_66834.0, CM084276_1_38960928.1, CM084274_1_4723647.1, CM084265_1_58530104.1, CM084272_1_18191744.0, CM084271_1_44077319.0, CM084267_1_2653032.1, CM084267_1_5168533.1, CM084265_1_64581822.1, CM084265_1_71792056.1, CM084277_1_5804275.0, CM084279_1_16586120.0, CM084270_1_39395914.1, CM084272_1_7002402.1, CM084265_1_66143662.1, CM084266_1_57882736.0, CM084274_1_4695205.0, CM084266_1_38532340.1, CM084273_1_31863671.1, CM084275_1_39500153.1, CM084279_1_10149534.1, CM084278_1_22667362.1",30,"adapter_trim.F1-B21-pH8.bam",-0.08,"adapter_trim.F1-B7-pH8.bam",-0.41,0.49 +"86","adapter_trim.F2-J186-pH7.bam","CM084275_1_42592955.0, CM084269_1_43525440.1, CM084267_1_2910813.0, CM084268_1_28845439.0, CM084268_1_24031315.1, CM084265_1_69381551.0, CM084267_1_2165108.0, CM084271_1_39685141.0, CM084275_1_66834.0, CM084276_1_38960928.1, CM084274_1_4723647.1, CM084265_1_58530104.1, CM084272_1_18191744.0, CM084271_1_44077319.0, CM084267_1_2653032.1, CM084267_1_5168533.1, CM084265_1_64581822.1, CM084265_1_71792056.1, CM084277_1_5804275.0, CM084279_1_16586120.0, CM084270_1_39395914.1, CM084272_1_7002402.1, CM084265_1_66143662.1, CM084266_1_57882736.0, CM084274_1_4695205.0, CM084266_1_38532340.1, CM084273_1_31863671.1, CM084275_1_39500153.1, CM084279_1_10149534.1, CM084278_1_22667362.1",30,"adapter_trim.F1-B15-pH8.bam",-0.25,"adapter_trim.F1-B1-pH8.bam",-0.02,0.27 +"87","adapter_trim.F2-J203-pH7.bam","CM084275_1_42592955.0, CM084269_1_43525440.1, CM084267_1_2910813.0, CM084268_1_28845439.0, CM084268_1_24031315.1, CM084265_1_69381551.0, CM084267_1_2165108.0, CM084271_1_39685141.0, CM084275_1_66834.0, CM084276_1_38960928.1, CM084274_1_4723647.1, CM084265_1_58530104.1, CM084272_1_18191744.0, CM084271_1_44077319.0, CM084267_1_2653032.1, CM084267_1_5168533.1, CM084265_1_64581822.1, CM084265_1_71792056.1, CM084277_1_5804275.0, CM084279_1_16586120.0, CM084270_1_39395914.1, CM084272_1_7002402.1, CM084265_1_66143662.1, CM084266_1_57882736.0, CM084274_1_4695205.0, CM084266_1_38532340.1, CM084273_1_31863671.1, CM084275_1_39500153.1, CM084279_1_10149534.1, CM084278_1_22667362.1",30,"adapter_trim.F1-B21-pH8.bam",0.1,"adapter_trim.F1-B7-pH8.bam",-0.07,0.17 +"88","adapter_trim.F2-B8-pH7.bam","CM084275_1_42592955.0, CM084269_1_43525440.1, CM084267_1_2910813.0, CM084268_1_28845439.0, CM084268_1_24031315.1, CM084265_1_69381551.0, CM084267_1_2165108.0, CM084271_1_39685141.0, CM084275_1_66834.0, CM084276_1_38960928.1, CM084274_1_4723647.1, CM084265_1_58530104.1, CM084272_1_18191744.0, CM084271_1_44077319.0, CM084267_1_2653032.1, CM084267_1_5168533.1, CM084265_1_64581822.1, CM084265_1_71792056.1, CM084277_1_5804275.0, CM084279_1_16586120.0, CM084270_1_39395914.1, CM084272_1_7002402.1, CM084265_1_66143662.1, CM084266_1_57882736.0, CM084274_1_4695205.0, CM084266_1_38532340.1, CM084273_1_31863671.1, CM084275_1_39500153.1, CM084279_1_10149534.1, CM084278_1_22667362.1",30,"adapter_trim.F1-B20-pH8.bam",-0.23,"adapter_trim.F1-B11-pH8.bam",-0.55,0.78 +"89","adapter_trim.F2-B7-pH7.bam","CM084278_1_20742383.0, CM084269_1_1556132.1, CM084279_1_1079183.0, CM084276_1_38943253.1, CM084276_1_12392692.0, CM084276_1_4238176.1, CM084268_1_50202371.0, CM084266_1_58087784.1, CM084271_1_289999.0, CM084265_1_71825876.0, CM084278_1_20734392.1, CM084275_1_312851.0, CM084275_1_25395479.1, CM084276_1_12392697.1, CM084269_1_15798267.1, CM084279_1_1892713.0, CM084268_1_49719767.0, CM084267_1_52593733.0, CM084267_1_5168533.1, CM084271_1_44228071.0, CM084278_1_4074392.0, CM084267_1_50392661.1, CM084269_1_1558041.1, CM084274_1_4868385.0, CM084270_1_972098.1, CM084266_1_63468218.1, CM084265_1_71899674.0, CM084271_1_346606.0, CM084272_1_1894340.1, CM084276_1_38773493.0",30,"adapter_trim.F1-B21-pH8.bam",-0.24,"adapter_trim.F1-B9-pH8.bam",-0.5,0.74 +"90","adapter_trim.F2-J204-pH7.bam","CM084270_1_4920904.0, CM084264_1_68634780.0, CM084265_1_1062161.0, CM084273_1_31862797.1, CM084264_1_2740163.0, CM084264_1_69294926.1, CM084267_1_51248426.1, CM084275_1_35720341.0, CM084273_1_4090291.0, CM084277_1_30027057.0, CM084276_1_1500490.0, CM084275_1_40706385.0, CM084265_1_59221320.1, CM084264_1_75278300.0, CM084274_1_4694578.0, CM084268_1_28845782.0, CM084274_1_4726244.0, CM084270_1_4751873.1, CM084264_1_34301159.0, CM084272_1_33453681.0, CM084265_1_68019714.1, CM084267_1_3748455.0, CM084269_1_46688972.0, CM084268_1_50792945.1, CM084268_1_50693597.0, CM084277_1_1856957.0, CM084265_1_66689301.1, CM084266_1_70707518.0, CM084264_1_69902275.0, CM084279_1_1072330.1",30,"adapter_trim.F1-B8-pH8.bam",-0.25,"adapter_trim.F1-B9-pH8.bam",-0.56,0.81 +"91","adapter_trim.F2-J223-pH7.bam","CM084270_1_4920904.0, CM084264_1_68634780.0, CM084265_1_1062161.0, CM084273_1_31862797.1, CM084264_1_2740163.0, CM084264_1_69294926.1, CM084267_1_51248426.1, CM084275_1_35720341.0, CM084273_1_4090291.0, CM084277_1_30027057.0, CM084276_1_1500490.0, CM084275_1_40706385.0, CM084265_1_59221320.1, CM084264_1_75278300.0, CM084274_1_4694578.0, CM084268_1_28845782.0, CM084274_1_4726244.0, CM084270_1_4751873.1, CM084264_1_34301159.0, CM084272_1_33453681.0, CM084265_1_68019714.1, CM084267_1_3748455.0, CM084269_1_46688972.0, CM084268_1_50792945.1, CM084268_1_50693597.0, CM084277_1_1856957.0, CM084265_1_66689301.1, CM084266_1_70707518.0, CM084264_1_69902275.0, CM084279_1_1072330.1",30,"adapter_trim.F1-B20-pH8.bam",-0.01,"adapter_trim.F1-B5-pH8.bam",-0.24,0.25 +"92","adapter_trim.F2-J225-pH7.bam","CM084270_1_4920904.0, CM084264_1_68634780.0, CM084265_1_1062161.0, CM084273_1_31862797.1, CM084264_1_2740163.0, CM084264_1_69294926.1, CM084267_1_51248426.1, CM084275_1_35720341.0, CM084273_1_4090291.0, CM084277_1_30027057.0, CM084276_1_1500490.0, CM084275_1_40706385.0, CM084265_1_59221320.1, CM084264_1_75278300.0, CM084274_1_4694578.0, CM084268_1_28845782.0, CM084274_1_4726244.0, CM084270_1_4751873.1, CM084264_1_34301159.0, CM084272_1_33453681.0, CM084265_1_68019714.1, CM084267_1_3748455.0, CM084269_1_46688972.0, CM084268_1_50792945.1, CM084268_1_50693597.0, CM084277_1_1856957.0, CM084265_1_66689301.1, CM084266_1_70707518.0, CM084264_1_69902275.0, CM084279_1_1072330.1",30,"adapter_trim.F1-B21-pH8.bam",-0.18,"adapter_trim.F1-B9-pH8.bam",-0.44,0.62 +"93","adapter_trim.F2-B2-pH7.bam","CM084274_1_4674060.0, CM084265_1_72368245.0, CM084272_1_1883067.0, CM084271_1_1034852.0, CM084271_1_344606.1, CM084264_1_69287125.1, CM084265_1_71826461.0, CM084267_1_6421555.1, CM084274_1_4734019.1, CM084268_1_3702289.1, CM084268_1_298790.1, CM084265_1_71826940.0, CM084268_1_9292527.0, CM084276_1_20157323.1, CM084264_1_74035920.0, CM084270_1_1559641.0, CM084274_1_4864445.0, CM084265_1_59221220.1, CM084274_1_4695204.0, CM084266_1_64726584.1, CM084266_1_67736800.0, CM084267_1_2908957.0, CM084266_1_68320526.0, CM084270_1_4921018.0, CM084272_1_7002400.0, CM084279_1_10149633.1, CM084274_1_43090783.1, CM084266_1_50301559.0, CM084265_1_70979994.1, CM084265_1_70977429.0",30,"adapter_trim.F1-B15-pH8.bam",-0.01,"adapter_trim.F1-B11-pH8.bam",-0.19,0.2 +"94","adapter_trim.F2-B10-pH7.bam","CM084278_1_15228738.1, CM084277_1_30027550.1, CM084266_1_71149023.1, CM084271_1_379011.0, CM084270_1_46587607.1, CM084269_1_43528550.1, CM084271_1_30532438.1, CM084266_1_69315469.1, CM084269_1_15799394.0, CM084266_1_57882079.0, CM084265_1_68807634.1, CM084270_1_10495951.0, CM084278_1_20591181.0, CM084269_1_1563962.0, CM084274_1_4788623.0, CM084272_1_33453891.1, CM084276_1_38785504.0, CM084275_1_312849.1, CM084278_1_22665042.0, CM084267_1_4505277.1, CM084279_1_32644179.0, CM084278_1_8558566.1, CM084271_1_218791.1, CM084271_1_3822772.1, CM084270_1_32126724.1, CM084271_1_43868149.0, CM084265_1_66143673.0, CM084278_1_22644846.0, CM084268_1_3699581.0, CM084264_1_6151084.1",30,"adapter_trim.F1-B20-pH8.bam",-0.2,"adapter_trim.F1-B11-pH8.bam",-0.21,0.41 +"95","adapter_trim.F2-B1-pH7.bam","CM084278_1_15228738.1, CM084277_1_30027550.1, CM084266_1_71149023.1, CM084271_1_379011.0, CM084270_1_46587607.1, CM084269_1_43528550.1, CM084271_1_30532438.1, CM084266_1_69315469.1, CM084269_1_15799394.0, CM084266_1_57882079.0, CM084265_1_68807634.1, CM084270_1_10495951.0, CM084278_1_20591181.0, CM084269_1_1563962.0, CM084274_1_4788623.0, CM084272_1_33453891.1, CM084276_1_38785504.0, CM084275_1_312849.1, CM084278_1_22665042.0, CM084267_1_4505277.1, CM084279_1_32644179.0, CM084278_1_8558566.1, CM084271_1_218791.1, CM084271_1_3822772.1, CM084270_1_32126724.1, CM084271_1_43868149.0, CM084265_1_66143673.0, CM084278_1_22644846.0, CM084268_1_3699581.0, CM084264_1_6151084.1",30,"adapter_trim.F1-B25-pH8.bam",-0.45,"adapter_trim.F1-B8-pH8.bam",-0.41,0.86 +"96","adapter_trim.F2-J186-pH7.bam","CM084268_1_1326515.1, CM084271_1_43868125.0, CM084268_1_24031246.0, CM084270_1_47076316.1, CM084269_1_1556253.1, CM084265_1_68807625.1, CM084278_1_20732784.0, CM084272_1_33453618.0, CM084277_1_29780894.0, CM084269_1_15823423.1, CM084264_1_69287336.1, CM084271_1_19656061.0, CM084276_1_38970482.1, CM084276_1_37352348.1, CM084279_1_10151201.0, CM084275_1_29098881.1, CM084274_1_4723647.1, CM084272_1_18194995.1, CM084279_1_32648014.0, CM084273_1_42285571.0, CM084268_1_938570.1, CM084278_1_23536923.0, CM084278_1_22664889.0, CM084265_1_72368293.0, CM084272_1_23578669.0, CM084275_1_35720346.0, CM084274_1_4863965.1, CM084278_1_22654601.0, CM084279_1_32640625.0, CM084265_1_66141859.0",30,"adapter_trim.F1-B15-pH8.bam",-0.15,"adapter_trim.F1-B7-pH8.bam",-0.21,0.36 +"97","adapter_trim.F2-J164-pH7.bam","CM084267_1_5161036.1, CM084264_1_2737867.1, CM084271_1_44083919.1, CM084266_1_70530691.0, CM084265_1_70609248.0, CM084266_1_69806293.0, CM084274_1_3688102.1, CM084266_1_23321836.1, CM084266_1_69052205.1, CM084279_1_10150674.1, CM084277_1_29780116.1, CM084276_1_20156972.0, CM084265_1_68074364.0, CM084278_1_16767343.1, CM084264_1_68688975.1, CM084274_1_34976974.0, CM084272_1_18188620.0, CM084266_1_57882581.0, CM084269_1_12905566.0, CM084276_1_1847305.0, CM084278_1_20689091.1, CM084265_1_71796317.0, CM084266_1_23321836.1, CM084276_1_37353183.1, CM084277_1_30027552.1, CM084278_1_34806817.1, CM084279_1_10149596.1, CM084279_1_32649961.1, CM084264_1_74076720.1, CM084275_1_39774860.0",30,"adapter_trim.F1-B15-pH8.bam",-0.15,"adapter_trim.F1-B9-pH8.bam",-0.27,0.42 +"98","adapter_trim.F2-B18-pH7.bam","CM084267_1_5161036.1, CM084264_1_2737867.1, CM084271_1_44083919.1, CM084266_1_70530691.0, CM084265_1_70609248.0, CM084266_1_69806293.0, CM084274_1_3688102.1, CM084266_1_23321836.1, CM084266_1_69052205.1, CM084279_1_10150674.1, CM084277_1_29780116.1, CM084276_1_20156972.0, CM084265_1_68074364.0, CM084278_1_16767343.1, CM084264_1_68688975.1, CM084274_1_34976974.0, CM084272_1_18188620.0, CM084266_1_57882581.0, CM084269_1_12905566.0, CM084276_1_1847305.0, CM084278_1_20689091.1, CM084265_1_71796317.0, CM084266_1_23321836.1, CM084276_1_37353183.1, CM084277_1_30027552.1, CM084278_1_34806817.1, CM084279_1_10149596.1, CM084279_1_32649961.1, CM084264_1_74076720.1, CM084275_1_39774860.0",30,"adapter_trim.F1-B8-pH8.bam",-0.27,"adapter_trim.F1-B5-pH8.bam",-0.44,0.71 +"99","adapter_trim.F2-B19-pH7.bam","CM084267_1_5161036.1, CM084264_1_2737867.1, CM084271_1_44083919.1, CM084266_1_70530691.0, CM084265_1_70609248.0, CM084266_1_69806293.0, CM084274_1_3688102.1, CM084266_1_23321836.1, CM084266_1_69052205.1, CM084279_1_10150674.1, CM084277_1_29780116.1, CM084276_1_20156972.0, CM084265_1_68074364.0, CM084278_1_16767343.1, CM084264_1_68688975.1, CM084274_1_34976974.0, CM084272_1_18188620.0, CM084266_1_57882581.0, CM084269_1_12905566.0, CM084276_1_1847305.0, CM084278_1_20689091.1, CM084265_1_71796317.0, CM084266_1_23321836.1, CM084276_1_37353183.1, CM084277_1_30027552.1, CM084278_1_34806817.1, CM084279_1_10149596.1, CM084279_1_32649961.1, CM084264_1_74076720.1, CM084275_1_39774860.0",30,"adapter_trim.F1-B15-pH8.bam",-0.15,"adapter_trim.F1-B11-pH8.bam",-0.35,0.5 +"100","adapter_trim.F2-B2-pH7.bam","CM084267_1_5161036.1, CM084264_1_2737867.1, CM084271_1_44083919.1, CM084266_1_70530691.0, CM084265_1_70609248.0, CM084266_1_69806293.0, CM084274_1_3688102.1, CM084266_1_23321836.1, CM084266_1_69052205.1, CM084279_1_10150674.1, CM084277_1_29780116.1, CM084276_1_20156972.0, CM084265_1_68074364.0, CM084278_1_16767343.1, CM084264_1_68688975.1, CM084274_1_34976974.0, CM084272_1_18188620.0, CM084266_1_57882581.0, CM084269_1_12905566.0, CM084276_1_1847305.0, CM084278_1_20689091.1, CM084265_1_71796317.0, CM084266_1_23321836.1, CM084276_1_37353183.1, CM084277_1_30027552.1, CM084278_1_34806817.1, CM084279_1_10149596.1, CM084279_1_32649961.1, CM084264_1_74076720.1, CM084275_1_39774860.0",30,"adapter_trim.F1-B8-pH8.bam",-0.27,"adapter_trim.F1-B11-pH8.bam",-0.47,0.74 +"101","adapter_trim.F2-J203-pH7.bam","CM084271_1_19655912.0, CM084276_1_1856643.0, CM084274_1_4869977.0, CM084266_1_68919215.1, CM084278_1_29698402.1, CM084264_1_26771529.1, CM084265_1_71899687.1, CM084264_1_70355068.1, CM084269_1_4626408.1, CM084269_1_47265506.1, CM084269_1_15828545.0, CM084264_1_73349432.1, CM084273_1_42252907.0, CM084266_1_69806294.0, CM084270_1_4920911.1, CM084264_1_26773650.1, CM084264_1_69863993.0, CM084268_1_50321875.1, CM084264_1_70390974.0, CM084267_1_9175515.0, CM084271_1_43868181.1, CM084265_1_65204740.0, CM084264_1_65408.0, CM084265_1_64527991.0, CM084269_1_47255758.1, CM084268_1_3704024.1, CM084270_1_46587592.0, CM084266_1_69052205.1, CM084272_1_18191742.0, CM084269_1_15813148.1",30,"adapter_trim.F1-B20-pH8.bam",-0.17,"adapter_trim.F1-B7-pH8.bam",-0.39,0.56 +"102","adapter_trim.F2-B12-pH7.bam","CM084271_1_19655912.0, CM084276_1_1856643.0, CM084274_1_4869977.0, CM084266_1_68919215.1, CM084278_1_29698402.1, CM084264_1_26771529.1, CM084265_1_71899687.1, CM084264_1_70355068.1, CM084269_1_4626408.1, CM084269_1_47265506.1, CM084269_1_15828545.0, CM084264_1_73349432.1, CM084273_1_42252907.0, CM084266_1_69806294.0, CM084270_1_4920911.1, CM084264_1_26773650.1, CM084264_1_69863993.0, CM084268_1_50321875.1, CM084264_1_70390974.0, CM084267_1_9175515.0, CM084271_1_43868181.1, CM084265_1_65204740.0, CM084264_1_65408.0, CM084265_1_64527991.0, CM084269_1_47255758.1, CM084268_1_3704024.1, CM084270_1_46587592.0, CM084266_1_69052205.1, CM084272_1_18191742.0, CM084269_1_15813148.1",30,"adapter_trim.F1-B21-pH8.bam",-0.25,"adapter_trim.F1-B10-pH8.bam",0.11,0.36 +"103","adapter_trim.F2-J187-pH7.bam","CM084272_1_1891465.1, CM084268_1_42863.0, CM084271_1_3814120.1, CM084275_1_39774860.0, CM084275_1_529155.0, CM084268_1_273292.1, CM084266_1_57882581.1, CM084264_1_2738116.0, CM084279_1_10150670.0, CM084265_1_70589360.1, CM084271_1_342830.0, CM084265_1_69004202.0, CM084278_1_4074395.1, CM084273_1_31865846.1, CM084274_1_4863779.0, CM084272_1_18170755.1, CM084272_1_2073148.0, CM084265_1_59221291.1, CM084270_1_46587591.0, CM084274_1_4793084.0, CM084277_1_29208305.1, CM084279_1_32915269.0, CM084265_1_73060616.1, CM084277_1_30168380.0, CM084273_1_31862599.0, CM084271_1_44069759.1, CM084265_1_72990731.0, CM084278_1_20734518.0, CM084267_1_8687446.0, CM084272_1_1144109.0",30,"adapter_trim.F1-B25-pH8.bam",0.07,"adapter_trim.F1-B4-pH8.bam",-0.4,0.47 +"104","adapter_trim.F2-J202-pH7.bam","CM084272_1_1891465.1, CM084268_1_42863.0, CM084271_1_3814120.1, CM084275_1_39774860.0, CM084275_1_529155.0, CM084268_1_273292.1, CM084266_1_57882581.1, CM084264_1_2738116.0, CM084279_1_10150670.0, CM084265_1_70589360.1, CM084271_1_342830.0, CM084265_1_69004202.0, CM084278_1_4074395.1, CM084273_1_31865846.1, CM084274_1_4863779.0, CM084272_1_18170755.1, CM084272_1_2073148.0, CM084265_1_59221291.1, CM084270_1_46587591.0, CM084274_1_4793084.0, CM084277_1_29208305.1, CM084279_1_32915269.0, CM084265_1_73060616.1, CM084277_1_30168380.0, CM084273_1_31862599.0, CM084271_1_44069759.1, CM084265_1_72990731.0, CM084278_1_20734518.0, CM084267_1_8687446.0, CM084272_1_1144109.0",30,"adapter_trim.F1-B21-pH8.bam",-0.42,"adapter_trim.F1-B8-pH8.bam",-0.11,0.53 +"105","adapter_trim.F2-J206-pH7.bam","CM084272_1_1891465.1, CM084268_1_42863.0, CM084271_1_3814120.1, CM084275_1_39774860.0, CM084275_1_529155.0, CM084268_1_273292.1, CM084266_1_57882581.1, CM084264_1_2738116.0, CM084279_1_10150670.0, CM084265_1_70589360.1, CM084271_1_342830.0, CM084265_1_69004202.0, CM084278_1_4074395.1, CM084273_1_31865846.1, CM084274_1_4863779.0, CM084272_1_18170755.1, CM084272_1_2073148.0, CM084265_1_59221291.1, CM084270_1_46587591.0, CM084274_1_4793084.0, CM084277_1_29208305.1, CM084279_1_32915269.0, CM084265_1_73060616.1, CM084277_1_30168380.0, CM084273_1_31862599.0, CM084271_1_44069759.1, CM084265_1_72990731.0, CM084278_1_20734518.0, CM084267_1_8687446.0, CM084272_1_1144109.0",30,"adapter_trim.F1-B15-pH8.bam",-0.35,"adapter_trim.F1-B8-pH8.bam",0.08,0.43 +"106","adapter_trim.F2-J164-pH7.bam","CM084271_1_11500058.1, CM084271_1_44104310.1, CM084265_1_24901859.0, CM084264_1_75278300.1, CM084266_1_65576934.1, CM084265_1_64735440.1, CM084272_1_18191577.0, CM084271_1_44077319.1, CM084265_1_70799357.0, CM084264_1_73926160.1, CM084265_1_68806446.1, CM084264_1_73927178.1, CM084264_1_70175545.0, CM084266_1_64002736.0, CM084275_1_25388576.1, CM084278_1_20734376.0, CM084270_1_8242350.0, CM084275_1_20000990.0, CM084279_1_10147216.0, CM084269_1_47255758.1, CM084267_1_832159.1, CM084270_1_26890196.0, CM084266_1_58087797.1, CM084273_1_37927756.1, CM084269_1_45238254.0, CM084266_1_57882736.0, CM084268_1_50225025.0, CM084277_1_30626985.0, CM084266_1_69723117.0, CM084269_1_1549190.1",30,"adapter_trim.F1-B21-pH8.bam",-0.03,"adapter_trim.F1-B9-pH8.bam",-0.01,0.04 +"107","adapter_trim.F2-J189-pH7.bam","CM084271_1_11500058.1, CM084271_1_44104310.1, CM084265_1_24901859.0, CM084264_1_75278300.1, CM084266_1_65576934.1, CM084265_1_64735440.1, CM084272_1_18191577.0, CM084271_1_44077319.1, CM084265_1_70799357.0, CM084264_1_73926160.1, CM084265_1_68806446.1, CM084264_1_73927178.1, CM084264_1_70175545.0, CM084266_1_64002736.0, CM084275_1_25388576.1, CM084278_1_20734376.0, CM084270_1_8242350.0, CM084275_1_20000990.0, CM084279_1_10147216.0, CM084269_1_47255758.1, CM084267_1_832159.1, CM084270_1_26890196.0, CM084266_1_58087797.1, CM084273_1_37927756.1, CM084269_1_45238254.0, CM084266_1_57882736.0, CM084268_1_50225025.0, CM084277_1_30626985.0, CM084266_1_69723117.0, CM084269_1_1549190.1",30,"adapter_trim.F1-B25-pH8.bam",-0.09,"adapter_trim.F1-B4-pH8.bam",0.18,0.27 +"108","adapter_trim.F2-J206-pH7.bam","CM084271_1_11500058.1, CM084271_1_44104310.1, CM084265_1_24901859.0, CM084264_1_75278300.1, CM084266_1_65576934.1, CM084265_1_64735440.1, CM084272_1_18191577.0, CM084271_1_44077319.1, CM084265_1_70799357.0, CM084264_1_73926160.1, CM084265_1_68806446.1, CM084264_1_73927178.1, CM084264_1_70175545.0, CM084266_1_64002736.0, CM084275_1_25388576.1, CM084278_1_20734376.0, CM084270_1_8242350.0, CM084275_1_20000990.0, CM084279_1_10147216.0, CM084269_1_47255758.1, CM084267_1_832159.1, CM084270_1_26890196.0, CM084266_1_58087797.1, CM084273_1_37927756.1, CM084269_1_45238254.0, CM084266_1_57882736.0, CM084268_1_50225025.0, CM084277_1_30626985.0, CM084266_1_69723117.0, CM084269_1_1549190.1",30,"adapter_trim.F1-B20-pH8.bam",-0.06,"adapter_trim.F1-B5-pH8.bam",-0.01,0.07 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CM084272_1_18191577.0, CM084271_1_44077319.1, CM084265_1_70799357.0, CM084264_1_73926160.1, CM084265_1_68806446.1, CM084264_1_73927178.1, CM084264_1_70175545.0, CM084266_1_64002736.0, CM084275_1_25388576.1, CM084278_1_20734376.0, CM084270_1_8242350.0, CM084275_1_20000990.0, CM084279_1_10147216.0, CM084269_1_47255758.1, CM084267_1_832159.1, CM084270_1_26890196.0, CM084266_1_58087797.1, CM084273_1_37927756.1, CM084269_1_45238254.0, CM084266_1_57882736.0, CM084268_1_50225025.0, CM084277_1_30626985.0, CM084266_1_69723117.0, CM084269_1_1549190.1",30,"adapter_trim.F1-B25-pH8.bam",-0.09,"adapter_trim.F1-B5-pH8.bam",-0.1,0.19 +"111","adapter_trim.F2-J189-pH7.bam","CM084264_1_61167140.1, CM084274_1_4694967.0, CM084273_1_31862649.1, CM084271_1_10301897.0, CM084264_1_73931025.1, CM084271_1_344406.0, CM084273_1_42253151.1, CM084264_1_72054053.1, CM084274_1_4808081.1, CM084273_1_268148.0, CM084275_1_36059096.1, CM084275_1_39776486.1, CM084270_1_46587592.0, CM084271_1_44070252.1, CM084278_1_22644747.0, CM084273_1_42255116.0, CM084268_1_3691710.1, CM084277_1_1868699.1, CM084266_1_70396060.1, CM084264_1_26773690.0, CM084272_1_33623932.0, CM084275_1_19996650.0, CM084264_1_69303600.0, CM084270_1_19464668.0, CM084264_1_73300783.1, CM084265_1_73060812.1, CM084278_1_22665572.1, CM084271_1_344406.0, CM084264_1_70471566.0, CM084264_1_73931173.1",30,"adapter_trim.F1-B21-pH8.bam",-0.28,"adapter_trim.F1-B7-pH8.bam",0.01,0.29 +"112","adapter_trim.F2-J225-pH7.bam","CM084264_1_61167140.1, CM084274_1_4694967.0, CM084273_1_31862649.1, CM084271_1_10301897.0, CM084264_1_73931025.1, CM084271_1_344406.0, CM084273_1_42253151.1, CM084264_1_72054053.1, CM084274_1_4808081.1, CM084273_1_268148.0, CM084275_1_36059096.1, CM084275_1_39776486.1, CM084270_1_46587592.0, CM084271_1_44070252.1, CM084278_1_22644747.0, CM084273_1_42255116.0, CM084268_1_3691710.1, CM084277_1_1868699.1, CM084266_1_70396060.1, CM084264_1_26773690.0, CM084272_1_33623932.0, CM084275_1_19996650.0, CM084264_1_69303600.0, CM084270_1_19464668.0, CM084264_1_73300783.1, CM084265_1_73060812.1, CM084278_1_22665572.1, CM084271_1_344406.0, CM084264_1_70471566.0, CM084264_1_73931173.1",30,"adapter_trim.F1-B21-pH8.bam",-0.22,"adapter_trim.F1-B9-pH8.bam",-0.2,0.42 +"113","adapter_trim.F2-B10-pH7.bam","CM084264_1_61167140.1, CM084274_1_4694967.0, CM084273_1_31862649.1, CM084271_1_10301897.0, CM084264_1_73931025.1, CM084271_1_344406.0, CM084273_1_42253151.1, CM084264_1_72054053.1, CM084274_1_4808081.1, CM084273_1_268148.0, CM084275_1_36059096.1, CM084275_1_39776486.1, CM084270_1_46587592.0, CM084271_1_44070252.1, CM084278_1_22644747.0, CM084273_1_42255116.0, CM084268_1_3691710.1, CM084277_1_1868699.1, CM084266_1_70396060.1, CM084264_1_26773690.0, CM084272_1_33623932.0, CM084275_1_19996650.0, CM084264_1_69303600.0, CM084270_1_19464668.0, CM084264_1_73300783.1, CM084265_1_73060812.1, CM084278_1_22665572.1, CM084271_1_344406.0, CM084264_1_70471566.0, CM084264_1_73931173.1",30,"adapter_trim.F1-B25-pH8.bam",-0.12,"adapter_trim.F1-B3-pH8.bam",-0.23,0.35 +"114","adapter_trim.F2-B8-pH7.bam","CM084264_1_61167140.1, CM084274_1_4694967.0, CM084273_1_31862649.1, CM084271_1_10301897.0, CM084264_1_73931025.1, CM084271_1_344406.0, CM084273_1_42253151.1, CM084264_1_72054053.1, CM084274_1_4808081.1, CM084273_1_268148.0, CM084275_1_36059096.1, CM084275_1_39776486.1, CM084270_1_46587592.0, CM084271_1_44070252.1, CM084278_1_22644747.0, CM084273_1_42255116.0, CM084268_1_3691710.1, CM084277_1_1868699.1, CM084266_1_70396060.1, CM084264_1_26773690.0, CM084272_1_33623932.0, CM084275_1_19996650.0, CM084264_1_69303600.0, CM084270_1_19464668.0, CM084264_1_73300783.1, CM084265_1_73060812.1, CM084278_1_22665572.1, CM084271_1_344406.0, CM084264_1_70471566.0, CM084264_1_73931173.1",30,"adapter_trim.F1-B21-pH8.bam",-0.16,"adapter_trim.F1-B8-pH8.bam",-0.05,0.21 +"115","adapter_trim.F2-J185-pH7.bam","CM084266_1_68322200.1, CM084269_1_1558052.0, CM084270_1_46587616.1, CM084265_1_70979994.1, CM084264_1_70355057.0, CM084274_1_34976974.1, CM084269_1_42862718.1, CM084266_1_71149025.0, CM084265_1_59221309.1, CM084274_1_4864682.1, CM084265_1_66689301.1, CM084268_1_50679570.1, CM084276_1_25975836.0, CM084273_1_31862797.1, CM084272_1_18191742.1, CM084277_1_18535877.1, CM084278_1_8558566.0, CM084274_1_11619978.0, CM084275_1_25393266.0, CM084264_1_65422.1, CM084271_1_1033937.1, CM084265_1_59221275.1, CM084267_1_13261420.1, CM084274_1_3691349.1, CM084277_1_6198930.1, CM084279_1_161041.1, CM084269_1_15812960.1, CM084279_1_161386.1, CM084268_1_82411.1, CM084274_1_4709636.1",30,"adapter_trim.F1-B20-pH8.bam",-0.22,"adapter_trim.F1-B8-pH8.bam",-0.38,0.6 +"116","adapter_trim.F2-J164-pH7.bam","CM084265_1_70798989.0, CM084270_1_1553326.1, CM084267_1_51248425.0, CM084271_1_3819548.1, CM084267_1_5165671.1, CM084266_1_64002736.0, CM084265_1_1062091.1, CM084267_1_2081906.0, CM084265_1_71899669.1, CM084266_1_70706235.1, CM084265_1_58531646.0, CM084277_1_18535877.1, CM084264_1_73152512.1, CM084276_1_38558603.1, CM084272_1_33616442.1, CM084265_1_59221322.1, CM084265_1_68806466.0, CM084276_1_1856639.1, CM084266_1_63167173.0, CM084278_1_20736236.0, CM084272_1_18188792.0, CM084267_1_5165693.1, CM084268_1_28858766.1, CM084274_1_42473136.1, CM084268_1_50200472.1, CM084267_1_52593751.0, CM084265_1_65233017.1, CM084272_1_33453804.1, CM084264_1_72117199.0, CM084270_1_47077595.1",30,"adapter_trim.F1-B25-pH8.bam",-0.29,"adapter_trim.F1-B11-pH8.bam",-0.16,0.45 +"117","adapter_trim.F2-J202-pH7.bam","CM084265_1_70798989.0, CM084270_1_1553326.1, CM084267_1_51248425.0, CM084271_1_3819548.1, CM084267_1_5165671.1, CM084266_1_64002736.0, CM084265_1_1062091.1, CM084267_1_2081906.0, CM084265_1_71899669.1, CM084266_1_70706235.1, CM084265_1_58531646.0, CM084277_1_18535877.1, CM084264_1_73152512.1, CM084276_1_38558603.1, CM084272_1_33616442.1, CM084265_1_59221322.1, CM084265_1_68806466.0, CM084276_1_1856639.1, CM084266_1_63167173.0, CM084278_1_20736236.0, CM084272_1_18188792.0, CM084267_1_5165693.1, CM084268_1_28858766.1, CM084274_1_42473136.1, CM084268_1_50200472.1, CM084267_1_52593751.0, CM084265_1_65233017.1, CM084272_1_33453804.1, CM084264_1_72117199.0, CM084270_1_47077595.1",30,"adapter_trim.F1-B15-pH8.bam",-0.03,"adapter_trim.F1-B10-pH8.bam",-0.09,0.12 +"118","adapter_trim.F2-B10-pH7.bam","CM084265_1_70798989.0, CM084270_1_1553326.1, CM084267_1_51248425.0, CM084271_1_3819548.1, CM084267_1_5165671.1, CM084266_1_64002736.0, CM084265_1_1062091.1, CM084267_1_2081906.0, CM084265_1_71899669.1, CM084266_1_70706235.1, CM084265_1_58531646.0, CM084277_1_18535877.1, CM084264_1_73152512.1, CM084276_1_38558603.1, CM084272_1_33616442.1, CM084265_1_59221322.1, CM084265_1_68806466.0, CM084276_1_1856639.1, CM084266_1_63167173.0, CM084278_1_20736236.0, CM084272_1_18188792.0, CM084267_1_5165693.1, CM084268_1_28858766.1, CM084274_1_42473136.1, CM084268_1_50200472.1, CM084267_1_52593751.0, CM084265_1_65233017.1, CM084272_1_33453804.1, CM084264_1_72117199.0, CM084270_1_47077595.1",30,"adapter_trim.F1-B8-pH8.bam",-0.17,"adapter_trim.F1-B9-pH8.bam",-0.29,0.46 +"119","adapter_trim.F2-J204-pH7.bam","CM084275_1_120888.0, CM084278_1_23554765.1, CM084267_1_2653040.1, CM084265_1_69381524.0, CM084274_1_4863996.1, CM084268_1_276461.1, CM084267_1_51241061.0, CM084273_1_31865230.0, CM084271_1_37244938.1, CM084274_1_4695106.0, CM084267_1_5161043.1, CM084267_1_5161043.0, CM084265_1_70974986.0, CM084266_1_68919270.1, CM084274_1_11619978.1, CM084265_1_59221383.1, CM084267_1_2652526.0, CM084276_1_20157075.1, CM084275_1_40706380.0, CM084266_1_68643487.1, CM084267_1_2081904.0, CM084266_1_50301498.0, CM084270_1_47077595.0, CM084267_1_51248500.0, CM084279_1_10149611.1, CM084266_1_58087045.0, CM084273_1_31863671.0, CM084265_1_71794444.0, CM084270_1_42355534.1, CM084278_1_5142968.0",30,"adapter_trim.F1-B8-pH8.bam",-0.11,"adapter_trim.F1-B9-pH8.bam",-0.21,0.32 +"120","adapter_trim.F2-J221-pH7.bam","CM084275_1_120888.0, CM084278_1_23554765.1, CM084267_1_2653040.1, CM084265_1_69381524.0, CM084274_1_4863996.1, CM084268_1_276461.1, CM084267_1_51241061.0, CM084273_1_31865230.0, CM084271_1_37244938.1, CM084274_1_4695106.0, CM084267_1_5161043.1, CM084267_1_5161043.0, CM084265_1_70974986.0, CM084266_1_68919270.1, CM084274_1_11619978.1, CM084265_1_59221383.1, CM084267_1_2652526.0, CM084276_1_20157075.1, CM084275_1_40706380.0, CM084266_1_68643487.1, CM084267_1_2081904.0, CM084266_1_50301498.0, CM084270_1_47077595.0, CM084267_1_51248500.0, CM084279_1_10149611.1, CM084266_1_58087045.0, CM084273_1_31863671.0, CM084265_1_71794444.0, CM084270_1_42355534.1, CM084278_1_5142968.0",30,"adapter_trim.F1-B25-pH8.bam",-0.14,"adapter_trim.F1-B8-pH8.bam",-0.2,0.34 +"121","adapter_trim.F2-J223-pH7.bam","CM084276_1_4855640.1, CM084266_1_66383710.1, CM084270_1_4920911.1, CM084271_1_44073407.0, CM084274_1_4726637.1, CM084268_1_50792945.1, CM084274_1_3692509.1, CM084265_1_70979994.0, CM084269_1_15818485.1, CM084279_1_32640566.0, CM084274_1_4808183.1, CM084270_1_47077463.0, CM084269_1_12905590.0, CM084277_1_1858867.0, CM084267_1_30269806.1, CM084273_1_31863691.0, CM084279_1_16586120.1, CM084274_1_4862951.0, CM084274_1_3691763.1, CM084273_1_31862197.1, CM084278_1_20732810.1, CM084267_1_956424.0, CM084264_1_73152512.0, CM084274_1_4870202.1, CM084271_1_44107457.0, CM084279_1_161176.1, CM084278_1_277789.1, CM084269_1_1549190.0, CM084276_1_38773525.0, CM084269_1_35642171.0",30,"adapter_trim.F1-B21-pH8.bam",-0.35,"adapter_trim.F1-B3-pH8.bam",-0.36,0.71 +"122","adapter_trim.F2-J184-pH7.bam","CM084275_1_524596.1, CM084266_1_68519988.0, CM084267_1_5165711.0, CM084264_1_68688357.0, CM084268_1_3691693.0, CM084275_1_319193.1, CM084269_1_15809963.0, CM084267_1_51366722.1, CM084268_1_50739244.0, CM084275_1_25397304.0, CM084274_1_4734039.1, CM084277_1_5804275.1, CM084277_1_35287257.1, CM084277_1_4875899.1, CM084264_1_2740285.1, CM084268_1_50219227.0, CM084266_1_58111750.0, CM084278_1_5144747.0, CM084264_1_2740173.1, CM084264_1_6151084.1, CM084264_1_70355052.1, CM084265_1_1062071.0, CM084278_1_20732803.0, CM084265_1_3130640.1, CM084271_1_218843.0, CM084274_1_4694578.0, CM084279_1_32640576.0, CM084264_1_2738036.0, CM084273_1_21179215.0, CM084267_1_13261525.1",30,"adapter_trim.F1-B15-pH8.bam",-0.12,"adapter_trim.F1-B1-pH8.bam",0.18,0.3 +"123","adapter_trim.F2-J186-pH7.bam","CM084275_1_524596.1, CM084266_1_68519988.0, CM084267_1_5165711.0, CM084264_1_68688357.0, CM084268_1_3691693.0, CM084275_1_319193.1, CM084269_1_15809963.0, CM084267_1_51366722.1, CM084268_1_50739244.0, CM084275_1_25397304.0, CM084274_1_4734039.1, CM084277_1_5804275.1, CM084277_1_35287257.1, CM084277_1_4875899.1, CM084264_1_2740285.1, CM084268_1_50219227.0, CM084266_1_58111750.0, CM084278_1_5144747.0, CM084264_1_2740173.1, CM084264_1_6151084.1, CM084264_1_70355052.1, CM084265_1_1062071.0, CM084278_1_20732803.0, CM084265_1_3130640.1, CM084271_1_218843.0, CM084274_1_4694578.0, CM084279_1_32640576.0, CM084264_1_2738036.0, CM084273_1_21179215.0, CM084267_1_13261525.1",30,"adapter_trim.F1-B15-pH8.bam",-0.06,"adapter_trim.F1-B5-pH8.bam",-0.2,0.26 +"124","adapter_trim.F2-B10-pH7.bam","CM084276_1_1856639.0, CM084271_1_43868181.0, CM084266_1_69545761.1, CM084278_1_23536960.1, CM084277_1_31027256.0, CM084269_1_1567396.1, CM084275_1_25395480.1, CM084278_1_19960942.0, CM084275_1_23095265.1, CM084274_1_5120654.0, CM084278_1_23542548.0, CM084266_1_23321829.0, CM084274_1_4788638.0, CM084266_1_57882736.1, CM084275_1_38995359.1, CM084271_1_43868179.1, CM084266_1_70686279.0, CM084265_1_72368172.0, CM084276_1_1625215.0, CM084272_1_1894276.1, CM084269_1_43525116.1, CM084265_1_71265230.1, CM084276_1_38970482.0, CM084274_1_4792256.1, CM084276_1_1856639.1, CM084273_1_31863596.0, CM084265_1_71794141.1, CM084271_1_10301903.1, CM084274_1_4792092.0, CM084276_1_20157067.0",30,"adapter_trim.F1-B25-pH8.bam",0.12,"adapter_trim.F1-B4-pH8.bam",0.12,0.24 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CM084274_1_4792352.1, CM084265_1_66141850.1, CM084264_1_73927181.1, CM084264_1_2740171.1, CM084276_1_1855851.0, CM084267_1_9175848.1, CM084273_1_31865846.0, CM084265_1_72636291.1, CM084270_1_9408158.0, CM084264_1_72054053.1, CM084266_1_65401945.0, CM084266_1_59802321.1, CM084266_1_57885157.1, CM084274_1_4709650.0, CM084274_1_4868366.0, CM084271_1_3816215.0, CM084266_1_65347099.1, CM084265_1_785368.0, CM084276_1_1856630.0, CM084268_1_49719742.1, CM084274_1_4796888.0, CM084269_1_43523897.1, CM084266_1_57888563.1",30,"adapter_trim.F1-B20-pH8.bam",-0.04,"adapter_trim.F1-B9-pH8.bam",-0.09,0.13 +"127","adapter_trim.F2-J227-pH7.bam","CM084265_1_60316158.0, CM084274_1_4732023.0, CM084264_1_65422.1, CM084264_1_71189798.0, CM084274_1_7449618.1, CM084275_1_25388559.1, CM084266_1_68659872.1, CM084274_1_4792352.1, CM084265_1_66141850.1, CM084264_1_73927181.1, CM084264_1_2740171.1, CM084276_1_1855851.0, CM084267_1_9175848.1, CM084273_1_31865846.0, CM084265_1_72636291.1, CM084270_1_9408158.0, CM084264_1_72054053.1, CM084266_1_65401945.0, CM084266_1_59802321.1, CM084266_1_57885157.1, CM084274_1_4709650.0, CM084274_1_4868366.0, CM084271_1_3816215.0, CM084266_1_65347099.1, CM084265_1_785368.0, CM084276_1_1856630.0, CM084268_1_49719742.1, CM084274_1_4796888.0, CM084269_1_43523897.1, CM084266_1_57888563.1",30,"adapter_trim.F1-B15-pH8.bam",0.16,"adapter_trim.F1-B10-pH8.bam",-0.3,0.46 +"128","adapter_trim.F2-J189-pH7.bam","CM084274_1_4694551.1, CM084272_1_33616442.0, CM084277_1_18546601.1, CM084279_1_1064676.1, CM084276_1_38117403.0, CM084266_1_57888961.0, CM084265_1_785368.1, CM084267_1_6421241.1, CM084264_1_73927178.0, CM084274_1_5120654.1, CM084269_1_43525440.0, CM084278_1_16773822.0, CM084266_1_57886153.0, CM084273_1_4090291.0, CM084275_1_675849.1, CM084278_1_22654601.0, CM084279_1_1064862.1, CM084276_1_38558546.1, CM084269_1_47563826.0, CM084271_1_218855.0, CM084269_1_45238238.0, CM084276_1_38773530.0, CM084278_1_20689098.0, CM084265_1_59221220.1, CM084275_1_38995254.0, CM084275_1_327918.0, CM084265_1_68786095.0, CM084276_1_2857930.0, CM084265_1_66141859.0, CM084264_1_70191778.0",30,"adapter_trim.F1-B8-pH8.bam",-0.1,"adapter_trim.F1-B3-pH8.bam",-0.1,0.2 +"129","adapter_trim.F2-B15-pH7.bam","CM084274_1_4694551.1, CM084272_1_33616442.0, CM084277_1_18546601.1, CM084279_1_1064676.1, CM084276_1_38117403.0, CM084266_1_57888961.0, CM084265_1_785368.1, CM084267_1_6421241.1, CM084264_1_73927178.0, CM084274_1_5120654.1, CM084269_1_43525440.0, CM084278_1_16773822.0, CM084266_1_57886153.0, CM084273_1_4090291.0, CM084275_1_675849.1, CM084278_1_22654601.0, CM084279_1_1064862.1, CM084276_1_38558546.1, CM084269_1_47563826.0, CM084271_1_218855.0, CM084269_1_45238238.0, CM084276_1_38773530.0, CM084278_1_20689098.0, CM084265_1_59221220.1, CM084275_1_38995254.0, CM084275_1_327918.0, CM084265_1_68786095.0, CM084276_1_2857930.0, CM084265_1_66141859.0, CM084264_1_70191778.0",30,"adapter_trim.F1-B25-pH8.bam",-0.35,"adapter_trim.F1-B8-pH8.bam",-0.22,0.57 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CM084269_1_15812960.1, CM084265_1_39553350.0, CM084274_1_4734036.0, CM084269_1_42862803.0, CM084269_1_15806965.1, CM084268_1_2717677.0, CM084274_1_4734039.1, CM084275_1_35717367.1, CM084264_1_8099096.0, CM084271_1_43868181.0, CM084269_1_15827788.1, CM084271_1_3819548.1, CM084274_1_4792352.1, CM084268_1_50219227.1, CM084267_1_2910818.1, CM084278_1_32252678.1, CM084274_1_34976974.1, CM084267_1_51919009.0, CM084279_1_10147284.1, CM084266_1_57888961.1, CM084264_1_73604722.0, CM084275_1_25393416.0, CM084269_1_15812959.1",30,"adapter_trim.F1-B15-pH8.bam",0.07,"adapter_trim.F1-B9-pH8.bam",0.06,0.13 +"132","adapter_trim.F2-J224-pH7.bam","CM084266_1_46766307.1, CM084269_1_15798357.1, CM084265_1_70589365.1, CM084275_1_40706380.1, CM084266_1_70940178.0, CM084274_1_34977131.1, CM084276_1_38970482.0, CM084269_1_15812960.1, CM084265_1_39553350.0, CM084274_1_4734036.0, CM084269_1_42862803.0, CM084269_1_15806965.1, CM084268_1_2717677.0, CM084274_1_4734039.1, CM084275_1_35717367.1, CM084264_1_8099096.0, CM084271_1_43868181.0, CM084269_1_15827788.1, CM084271_1_3819548.1, CM084274_1_4792352.1, CM084268_1_50219227.1, CM084267_1_2910818.1, CM084278_1_32252678.1, CM084274_1_34976974.1, CM084267_1_51919009.0, CM084279_1_10147284.1, CM084266_1_57888961.1, CM084264_1_73604722.0, CM084275_1_25393416.0, CM084269_1_15812959.1",30,"adapter_trim.F1-B15-pH8.bam",-0.08,"adapter_trim.F1-B7-pH8.bam",-0.1,0.18 +"133","adapter_trim.F2-J166-pH7.bam","CM084267_1_52593725.0, CM084272_1_33503448.1, CM084266_1_816291.0, CM084274_1_4769100.0, CM084275_1_328861.1, CM084275_1_39781005.0, CM084274_1_4773524.1, CM084270_1_13944196.1, CM084277_1_31222635.1, CM084273_1_42287132.0, CM084267_1_6420945.1, CM084264_1_70188213.1, CM084264_1_34300890.0, CM084264_1_73926177.1, CM084274_1_43090783.0, CM084267_1_51241061.0, CM084276_1_38552515.1, CM084264_1_26773690.1, CM084269_1_46688892.1, CM084265_1_65232929.0, CM084264_1_72912659.1, CM084264_1_73886234.1, CM084269_1_4628639.1, CM084264_1_39013.0, CM084265_1_66141859.0, CM084264_1_64874708.1, CM084272_1_18553681.1, CM084265_1_64196870.0, CM084266_1_57888563.0, CM084273_1_31862476.1",30,"adapter_trim.F1-B20-pH8.bam",-0.61,"adapter_trim.F1-B1-pH8.bam",-0.22,0.83 +"134","adapter_trim.F2-J201-pH7.bam","CM084275_1_23095998.1, CM084274_1_4709671.0, CM084264_1_74266355.1, CM084267_1_9175847.1, CM084271_1_10303572.0, CM084276_1_38558602.0, CM084274_1_4795112.0, CM084276_1_38788200.1, CM084272_1_18191738.0, CM084271_1_344606.1, CM084266_1_68322200.0, CM084268_1_50224886.1, CM084274_1_5120654.1, CM084276_1_20157216.1, CM084265_1_72071409.0, CM084274_1_4785935.0, CM084276_1_38558585.0, CM084276_1_1625215.1, CM084272_1_1891434.0, CM084269_1_1555094.1, CM084266_1_70181836.1, CM084264_1_72075476.0, CM084276_1_38450614.0, CM084276_1_38271843.1, CM084279_1_1072330.0, CM084275_1_25393266.1, CM084271_1_10303572.1, CM084265_1_73060895.1, CM084275_1_36059096.1, 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CM084267_1_9175847.1, CM084271_1_10303572.0, CM084276_1_38558602.0, CM084274_1_4795112.0, CM084276_1_38788200.1, CM084272_1_18191738.0, CM084271_1_344606.1, CM084266_1_68322200.0, CM084268_1_50224886.1, CM084274_1_5120654.1, CM084276_1_20157216.1, CM084265_1_72071409.0, CM084274_1_4785935.0, CM084276_1_38558585.0, CM084276_1_1625215.1, CM084272_1_1891434.0, CM084269_1_1555094.1, CM084266_1_70181836.1, CM084264_1_72075476.0, CM084276_1_38450614.0, CM084276_1_38271843.1, CM084279_1_1072330.0, CM084275_1_25393266.1, CM084271_1_10303572.1, CM084265_1_73060895.1, CM084275_1_36059096.1, CM084274_1_4793160.0",30,"adapter_trim.F1-B8-pH8.bam",-0.34,"adapter_trim.F1-B7-pH8.bam",-0.07,0.41 +"137","adapter_trim.F2-J164-pH7.bam","CM084279_1_1070761.1, CM084268_1_24031315.0, CM084274_1_4870197.1, CM084265_1_73061238.0, CM084274_1_4708834.1, CM084275_1_25395480.1, CM084265_1_71925203.1, CM084264_1_64487845.0, CM084270_1_32126729.0, CM084269_1_46733053.0, CM084267_1_2646656.0, CM084265_1_68869208.0, 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CM084268_1_50321964.0, CM084274_1_34977131.1, CM084276_1_38072633.0, CM084265_1_794840.1, CM084279_1_160989.1, CM084276_1_1625257.1, CM084274_1_42855649.0, CM084276_1_1852880.1, CM084274_1_4727318.0",30,"adapter_trim.F1-B8-pH8.bam",-0.51,"adapter_trim.F1-B3-pH8.bam",-0.38,0.89 +"139","adapter_trim.F2-B15-pH7.bam","CM084275_1_39502463.1, CM084267_1_51167077.1, CM084266_1_70707608.1, CM084266_1_68519988.0, CM084264_1_73926177.0, CM084275_1_39776469.1, CM084279_1_1070298.0, CM084265_1_71925442.0, CM084276_1_38775920.1, CM084266_1_71319410.0, CM084266_1_69806293.0, CM084274_1_4694239.0, CM084268_1_43541.0, CM084266_1_68643450.1, CM084276_1_1500414.1, CM084275_1_529192.0, CM084276_1_38788200.0, CM084266_1_69089438.1, CM084267_1_832165.1, CM084269_1_35627230.1, CM084264_1_69902276.0, CM084268_1_50321964.0, CM084274_1_34977131.1, CM084276_1_38072633.0, CM084265_1_794840.1, CM084279_1_160989.1, CM084276_1_1625257.1, CM084274_1_42855649.0, CM084276_1_1852880.1, CM084274_1_4727318.0",30,"adapter_trim.F1-B21-pH8.bam",-0.2,"adapter_trim.F1-B3-pH8.bam",-0.17,0.37 +"140","adapter_trim.F2-J186-pH7.bam","CM084275_1_39500153.1, CM084266_1_68320526.0, CM084279_1_1882771.1, CM084267_1_699449.0, CM084265_1_68786095.1, CM084278_1_279354.0, CM084276_1_1852865.0, CM084273_1_21179270.0, CM084275_1_29098652.0, CM084265_1_70801101.0, CM084278_1_23555170.1, CM084264_1_64487845.0, CM084265_1_65268038.1, CM084265_1_66141859.0, CM084274_1_4769100.1, CM084266_1_70706235.0, CM084268_1_50202371.0, CM084267_1_2910818.1, CM084264_1_2738036.1, CM084266_1_64164380.1, CM084265_1_72986756.0, CM084279_1_1062135.1, CM084271_1_43934405.1, CM084267_1_51346515.0, CM084270_1_8242343.1, CM084265_1_785368.0, CM084276_1_20157194.0, CM084275_1_35720350.0, CM084268_1_50681646.1, CM084271_1_44075863.0",30,"adapter_trim.F1-B25-pH8.bam",-0.14,"adapter_trim.F1-B10-pH8.bam",-0.37,0.51 +"141","adapter_trim.F2-J221-pH7.bam","CM084275_1_39500153.1, CM084266_1_68320526.0, CM084279_1_1882771.1, CM084267_1_699449.0, CM084265_1_68786095.1, CM084278_1_279354.0, CM084276_1_1852865.0, CM084273_1_21179270.0, CM084275_1_29098652.0, CM084265_1_70801101.0, CM084278_1_23555170.1, CM084264_1_64487845.0, CM084265_1_65268038.1, CM084265_1_66141859.0, CM084274_1_4769100.1, CM084266_1_70706235.0, CM084268_1_50202371.0, CM084267_1_2910818.1, CM084264_1_2738036.1, CM084266_1_64164380.1, CM084265_1_72986756.0, CM084279_1_1062135.1, CM084271_1_43934405.1, CM084267_1_51346515.0, CM084270_1_8242343.1, CM084265_1_785368.0, CM084276_1_20157194.0, CM084275_1_35720350.0, CM084268_1_50681646.1, CM084271_1_44075863.0",30,"adapter_trim.F1-B25-pH8.bam",-0.04,"adapter_trim.F1-B9-pH8.bam",-0.45,0.49 +"142","adapter_trim.F2-J225-pH7.bam","CM084275_1_39500153.1, CM084266_1_68320526.0, CM084279_1_1882771.1, CM084267_1_699449.0, CM084265_1_68786095.1, CM084278_1_279354.0, CM084276_1_1852865.0, CM084273_1_21179270.0, CM084275_1_29098652.0, CM084265_1_70801101.0, CM084278_1_23555170.1, CM084264_1_64487845.0, CM084265_1_65268038.1, CM084265_1_66141859.0, CM084274_1_4769100.1, CM084266_1_70706235.0, CM084268_1_50202371.0, CM084267_1_2910818.1, CM084264_1_2738036.1, CM084266_1_64164380.1, CM084265_1_72986756.0, CM084279_1_1062135.1, CM084271_1_43934405.1, CM084267_1_51346515.0, CM084270_1_8242343.1, CM084265_1_785368.0, CM084276_1_20157194.0, CM084275_1_35720350.0, CM084268_1_50681646.1, CM084271_1_44075863.0",30,"adapter_trim.F1-B20-pH8.bam",-0.33,"adapter_trim.F1-B10-pH8.bam",-0.47,0.8 +"143","adapter_trim.F2-J186-pH7.bam","CM084275_1_39502397.1, CM084272_1_33452338.0, CM084272_1_2072764.1, CM084279_1_993504.1, CM084265_1_72368298.0, CM084264_1_73291570.1, CM084267_1_51241061.1, CM084266_1_68478650.1, CM084267_1_2426163.0, CM084266_1_70707506.0, CM084264_1_74191574.0, CM084277_1_10628425.0, CM084279_1_31409261.1, CM084278_1_5144637.1, CM084274_1_4723647.0, CM084266_1_57886823.1, CM084265_1_70577871.0, CM084266_1_68659872.1, CM084275_1_35717367.0, CM084274_1_4795049.1, CM084267_1_51248426.0, CM084274_1_4863936.1, CM084269_1_45310979.1, CM084268_1_9292474.0, CM084264_1_8098032.1, CM084270_1_4921103.1, CM084278_1_279479.0, CM084270_1_12307506.1, CM084266_1_70706263.0, CM084268_1_28845513.1",30,"adapter_trim.F1-B15-pH8.bam",-0.25,"adapter_trim.F1-B1-pH8.bam",-0.29,0.54 +"144","adapter_trim.F2-J203-pH7.bam","CM084276_1_1856639.0, CM084264_1_66077502.0, CM084270_1_42345710.0, CM084265_1_71265331.0, CM084265_1_64528148.1, CM084279_1_31075821.0, CM084272_1_1327530.1, CM084267_1_5168533.1, CM084264_1_69712159.0, CM084265_1_71899669.1, CM084274_1_34977123.0, CM084265_1_71831401.0, CM084271_1_43339301.1, CM084266_1_71166433.1, CM084265_1_72990731.0, CM084264_1_70175539.1, CM084271_1_3814148.0, CM084270_1_46587632.0, CM084265_1_73061282.1, CM084275_1_35722060.0, CM084269_1_46689554.0, CM084267_1_2908982.0, CM084279_1_10156977.0, CM084276_1_714435.1, CM084269_1_43523897.0, CM084275_1_267983.1, CM084268_1_2832731.1, CM084266_1_69625511.1, CM084268_1_3704020.1, CM084274_1_4863048.0",30,"adapter_trim.F1-B25-pH8.bam",-0.19,"adapter_trim.F1-B11-pH8.bam",-0.09,0.28 +"145","adapter_trim.F2-J164-pH7.bam","CM084270_1_47077588.1, CM084266_1_64725843.0, CM084269_1_1538788.0, CM084278_1_20630020.1, CM084264_1_72011674.0, CM084266_1_23295949.1, CM084269_1_1541112.0, CM084265_1_68807634.1, CM084266_1_58087794.0, CM084264_1_69534058.0, CM084274_1_4795858.1, CM084269_1_35627068.1, CM084276_1_935739.0, CM084264_1_71718001.1, CM084272_1_44059306.1, CM084268_1_28845509.0, CM084266_1_69806294.0, CM084266_1_70706238.1, CM084266_1_62460058.0, CM084278_1_30230906.0, CM084273_1_32698906.0, CM084264_1_70181718.0, CM084271_1_37237148.0, CM084273_1_31863691.1, CM084265_1_64196855.0, CM084265_1_71925176.0, CM084266_1_58099055.0, CM084274_1_4708733.1, CM084274_1_4863726.1, CM084278_1_16774412.1",30,"adapter_trim.F1-B21-pH8.bam",0.06,"adapter_trim.F1-B7-pH8.bam",-0.26,0.32 +"146","adapter_trim.F2-J205-pH7.bam","CM084270_1_47077588.1, CM084266_1_64725843.0, CM084269_1_1538788.0, CM084278_1_20630020.1, CM084264_1_72011674.0, CM084266_1_23295949.1, CM084269_1_1541112.0, CM084265_1_68807634.1, CM084266_1_58087794.0, CM084264_1_69534058.0, CM084274_1_4795858.1, CM084269_1_35627068.1, CM084276_1_935739.0, CM084264_1_71718001.1, CM084272_1_44059306.1, CM084268_1_28845509.0, CM084266_1_69806294.0, CM084266_1_70706238.1, CM084266_1_62460058.0, CM084278_1_30230906.0, CM084273_1_32698906.0, CM084264_1_70181718.0, CM084271_1_37237148.0, CM084273_1_31863691.1, CM084265_1_64196855.0, CM084265_1_71925176.0, CM084266_1_58099055.0, CM084274_1_4708733.1, CM084274_1_4863726.1, CM084278_1_16774412.1",30,"adapter_trim.F1-B8-pH8.bam",-0.49,"adapter_trim.F1-B11-pH8.bam",-0.25,0.74 +"147","adapter_trim.F2-B4-pH7.bam","CM084270_1_47077588.1, CM084266_1_64725843.0, CM084269_1_1538788.0, CM084278_1_20630020.1, CM084264_1_72011674.0, CM084266_1_23295949.1, CM084269_1_1541112.0, CM084265_1_68807634.1, CM084266_1_58087794.0, CM084264_1_69534058.0, CM084274_1_4795858.1, CM084269_1_35627068.1, CM084276_1_935739.0, CM084264_1_71718001.1, CM084272_1_44059306.1, CM084268_1_28845509.0, CM084266_1_69806294.0, CM084266_1_70706238.1, CM084266_1_62460058.0, CM084278_1_30230906.0, CM084273_1_32698906.0, CM084264_1_70181718.0, CM084271_1_37237148.0, CM084273_1_31863691.1, CM084265_1_64196855.0, CM084265_1_71925176.0, CM084266_1_58099055.0, CM084274_1_4708733.1, CM084274_1_4863726.1, CM084278_1_16774412.1",30,"adapter_trim.F1-B21-pH8.bam",-0.14,"adapter_trim.F1-B4-pH8.bam",0.03,0.17 +"148","adapter_trim.F2-J165-pH7.bam","CM084271_1_44070313.0, CM084273_1_31865208.1, CM084278_1_22660266.1, CM084271_1_3820313.1, CM084278_1_20858390.0, CM084267_1_52593725.0, CM084272_1_18194972.1, CM084275_1_39502454.0, CM084274_1_4864709.1, CM084277_1_30168380.1, CM084278_1_16773822.1, CM084265_1_72178237.1, CM084265_1_64735166.0, CM084265_1_794877.1, CM084275_1_20000943.1, CM084269_1_45238238.0, CM084266_1_1230887.0, CM084278_1_20600197.0, CM084265_1_1816612.0, CM084268_1_3699577.0, CM084266_1_69052185.0, CM084268_1_1326648.1, CM084272_1_36474234.0, CM084272_1_44059306.1, CM084266_1_64002578.1, CM084265_1_70595159.0, CM084278_1_16773822.1, CM084266_1_68659872.0, CM084275_1_524597.1, CM084264_1_74721329.1",30,"adapter_trim.F1-B21-pH8.bam",-0.21,"adapter_trim.F1-B4-pH8.bam",-0.15,0.36 +"149","adapter_trim.F2-J166-pH7.bam","CM084271_1_44070313.0, CM084273_1_31865208.1, CM084278_1_22660266.1, CM084271_1_3820313.1, CM084278_1_20858390.0, CM084267_1_52593725.0, CM084272_1_18194972.1, CM084275_1_39502454.0, CM084274_1_4864709.1, CM084277_1_30168380.1, CM084278_1_16773822.1, CM084265_1_72178237.1, CM084265_1_64735166.0, CM084265_1_794877.1, CM084275_1_20000943.1, CM084269_1_45238238.0, CM084266_1_1230887.0, CM084278_1_20600197.0, CM084265_1_1816612.0, CM084268_1_3699577.0, CM084266_1_69052185.0, CM084268_1_1326648.1, CM084272_1_36474234.0, CM084272_1_44059306.1, CM084266_1_64002578.1, CM084265_1_70595159.0, CM084278_1_16773822.1, CM084266_1_68659872.0, CM084275_1_524597.1, CM084264_1_74721329.1",30,"adapter_trim.F1-B8-pH8.bam",-0.1,"adapter_trim.F1-B1-pH8.bam",-0.04,0.14 +"150","adapter_trim.F2-J166-pH7.bam","CM084279_1_1070313.0, CM084264_1_74800265.1, CM084267_1_51248500.1, CM084274_1_42855653.1, CM084269_1_15823423.1, CM084275_1_39500153.1, CM084268_1_2720906.1, CM084267_1_50994193.0, CM084272_1_23578669.1, CM084278_1_5144637.1, CM084266_1_70396245.1, CM084271_1_218835.0, CM084265_1_66141834.0, CM084272_1_1308695.1, CM084264_1_70175500.1, CM084272_1_18194306.0, CM084264_1_70466147.0, CM084276_1_38558559.0, CM084267_1_2426156.0, CM084272_1_1584311.0, CM084276_1_38772805.1, CM084279_1_23112955.1, CM084269_1_15812958.1, CM084274_1_4863726.0, CM084265_1_73060898.1, CM084266_1_57841523.0, CM084264_1_8098050.0, CM084272_1_1726223.1, CM084277_1_30027552.0, CM084269_1_35627096.0",30,"adapter_trim.F1-B20-pH8.bam",-0.08,"adapter_trim.F1-B10-pH8.bam",-0.03,0.11 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CM084274_1_4862784.1, CM084265_1_65204740.0, CM084266_1_71166448.0, CM084264_1_75506833.1, CM084271_1_43860422.0, CM084273_1_31862787.1, CM084267_1_700054.1, CM084268_1_18512798.0, CM084266_1_70706235.0, CM084264_1_73291504.1, CM084278_1_19960942.1, CM084268_1_42008.1, CM084269_1_40336193.0, CM084278_1_22644747.1, CM084268_1_50323442.1, CM084276_1_2855917.0, CM084278_1_22664889.1, CM084264_1_70466152.0, CM084267_1_13261464.1, CM084278_1_8558559.1, CM084270_1_4751834.1, CM084271_1_340905.0, CM084276_1_38072623.0",30,"adapter_trim.F1-B8-pH8.bam",-0.21,"adapter_trim.F1-B10-pH8.bam",-0.12,0.33 +"153","adapter_trim.F2-J227-pH7.bam","CM084278_1_20679238.1, CM084276_1_38287449.0, CM084267_1_52591726.0, CM084274_1_5120580.1, CM084269_1_43525116.1, CM084264_1_34293018.0, CM084273_1_42285391.0, CM084274_1_4862784.1, CM084265_1_65204740.0, CM084266_1_71166448.0, CM084264_1_75506833.1, CM084271_1_43860422.0, CM084273_1_31862787.1, CM084267_1_700054.1, CM084268_1_18512798.0, CM084266_1_70706235.0, CM084264_1_73291504.1, CM084278_1_19960942.1, CM084268_1_42008.1, CM084269_1_40336193.0, CM084278_1_22644747.1, CM084268_1_50323442.1, CM084276_1_2855917.0, CM084278_1_22664889.1, CM084264_1_70466152.0, CM084267_1_13261464.1, CM084278_1_8558559.1, CM084270_1_4751834.1, CM084271_1_340905.0, CM084276_1_38072623.0",30,"adapter_trim.F1-B25-pH8.bam",-0.53,"adapter_trim.F1-B7-pH8.bam",-0.53,1.06 +"154","adapter_trim.F2-J165-pH7.bam","CM084274_1_4795062.0, CM084267_1_2910789.1, CM084272_1_1726216.0, CM084266_1_64725843.0, CM084271_1_274110.1, CM084273_1_31863606.0, CM084269_1_1567360.1, CM084273_1_11263082.1, CM084275_1_25388888.1, CM084277_1_1869733.0, CM084269_1_15827788.1, CM084264_1_12084151.1, CM084267_1_50392699.1, CM084266_1_69141202.0, CM084271_1_44190489.0, CM084267_1_2908982.1, CM084269_1_46692137.0, CM084265_1_72636291.0, CM084274_1_4708223.1, CM084269_1_1567498.1, CM084265_1_69381551.1, CM084275_1_25388888.0, CM084275_1_36059096.0, CM084272_1_2072764.1, CM084269_1_15798363.1, CM084278_1_20732784.0, CM084272_1_33503418.0, CM084272_1_2073148.0, CM084279_1_31409052.1, CM084274_1_4862951.0",30,"adapter_trim.F1-B20-pH8.bam",-0.16,"adapter_trim.F1-B10-pH8.bam",-0.56,0.72 +"155","adapter_trim.F2-J224-pH7.bam","CM084264_1_73926180.0, CM084264_1_12084151.1, CM084269_1_45280054.0, CM084274_1_5566177.1, CM084270_1_8242296.0, CM084264_1_34301159.0, CM084270_1_4921103.1, CM084273_1_268148.1, CM084271_1_43860422.1, CM084267_1_699428.1, CM084265_1_71828881.0, CM084276_1_56048.0, CM084269_1_42862695.1, CM084269_1_43525133.1, CM084276_1_38558602.1, CM084271_1_44075852.0, CM084278_1_19961223.1, CM084274_1_4796871.1, CM084266_1_64725871.1, CM084276_1_11709760.0, CM084268_1_50200472.1, CM084274_1_4796888.0, CM084279_1_32915259.1, CM084274_1_4769100.1, CM084264_1_68688357.0, CM084278_1_23542543.0, CM084266_1_70400231.0, CM084272_1_9069880.1, CM084277_1_30027550.1, CM084270_1_32126729.0",30,"adapter_trim.F1-B15-pH8.bam",-0.17,"adapter_trim.F1-B1-pH8.bam",-0.08,0.25 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CM084277_1_29780644.1, CM084275_1_126552.0, CM084279_1_10153273.1, CM084270_1_47077551.0, CM084266_1_68478650.1, CM084273_1_32683016.0, CM084269_1_35627100.1, CM084274_1_4773486.0, CM084264_1_34294476.0, CM084275_1_312851.1, CM084269_1_35627080.1, CM084273_1_31865409.1, CM084274_1_4868366.0, CM084275_1_25388576.0, CM084275_1_312849.0, CM084265_1_8362532.1, CM084269_1_1544562.0, CM084266_1_1233079.1, CM084265_1_71925486.0, CM084269_1_1572991.0, CM084276_1_56075.0, CM084271_1_11500090.0, CM084275_1_39500153.1",30,"adapter_trim.F1-B25-pH8.bam",-0.09,"adapter_trim.F1-B8-pH8.bam",-0.07,0.16 +"158","adapter_trim.F2-J202-pH7.bam","CM084274_1_4785921.0, CM084270_1_19464668.1, CM084271_1_44090302.0, CM084268_1_47694452.0, CM084273_1_32698908.0, CM084279_1_1062150.1, CM084266_1_63468226.1, CM084276_1_38558546.0, CM084269_1_15823100.0, CM084264_1_69865995.0, CM084264_1_72054053.0, CM084269_1_42862695.0, CM084265_1_65322091.0, CM084266_1_69085559.1, CM084276_1_20156972.1, CM084265_1_72368258.0, 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CM084269_1_39737144.1, CM084277_1_5804354.0, CM084274_1_42859635.1, CM084265_1_70799356.1, CM084266_1_68659587.1, CM084264_1_8098035.0",30,"adapter_trim.F1-B25-pH8.bam",0.15,"adapter_trim.F1-B7-pH8.bam",-0.02,0.17 +"160","adapter_trim.F2-B4-pH7.bam","CM084274_1_4785921.0, CM084270_1_19464668.1, CM084271_1_44090302.0, CM084268_1_47694452.0, CM084273_1_32698908.0, CM084279_1_1062150.1, CM084266_1_63468226.1, CM084276_1_38558546.0, CM084269_1_15823100.0, CM084264_1_69865995.0, CM084264_1_72054053.0, CM084269_1_42862695.0, CM084265_1_65322091.0, CM084266_1_69085559.1, CM084276_1_20156972.1, CM084265_1_72368258.0, CM084272_1_33452056.0, CM084264_1_69757037.0, CM084264_1_73931024.1, CM084272_1_33497675.0, CM084264_1_70456947.1, CM084266_1_57882606.1, CM084272_1_18194019.1, CM084278_1_16767343.0, CM084269_1_39737144.1, CM084277_1_5804354.0, CM084274_1_42859635.1, CM084265_1_70799356.1, CM084266_1_68659587.1, 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CM084267_1_8687374.0, CM084271_1_1033792.0, CM084271_1_19656061.1, CM084279_1_10156950.1, CM084275_1_1304701.1, CM084271_1_344493.1, CM084275_1_2509962.0, CM084279_1_992716.0, CM084269_1_15813374.1, CM084275_1_524618.1, CM084271_1_218855.1, CM084264_1_69682047.0, CM084264_1_74035920.1, CM084265_1_46089269.0, CM084269_1_1572991.0, CM084277_1_18546604.0, CM084269_1_35627096.1, CM084264_1_8098050.1, CM084265_1_72926026.1, CM084271_1_26332994.1, CM084276_1_4238124.1, CM084273_1_32698886.1, CM084268_1_18519471.0, CM084272_1_43469474.0, CM084277_1_1856957.1, CM084274_1_4795482.0, CM084274_1_4795460.1, CM084274_1_42859637.1",30,"adapter_trim.F1-B25-pH8.bam",0.2,"adapter_trim.F1-B3-pH8.bam",-0.19,0.39 +"163","adapter_trim.F2-J223-pH7.bam","CM084266_1_69095441.0, CM084269_1_43524676.0, CM084267_1_8687374.0, CM084271_1_1033792.0, CM084271_1_19656061.1, CM084279_1_10156950.1, CM084275_1_1304701.1, CM084271_1_344493.1, CM084275_1_2509962.0, CM084279_1_992716.0, CM084269_1_15813374.1, 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CM084271_1_1052214.1, CM084264_1_70471577.1, CM084265_1_71925202.1, CM084275_1_42592955.1, CM084265_1_54595186.0, CM084279_1_1064680.1, CM084277_1_30631457.0, CM084276_1_20157325.0, CM084269_1_15798323.1, CM084265_1_61648598.0, CM084264_1_7131437.1, CM084272_1_1891444.0, CM084264_1_61167161.1, CM084273_1_42294202.0, CM084276_1_1510330.1",30,"adapter_trim.F1-B25-pH8.bam",-0.01,"adapter_trim.F1-B7-pH8.bam",-0.32,0.33 +"175","adapter_trim.F2-B19-pH7.bam","CM084267_1_13261449.0, CM084266_1_58087892.0, CM084272_1_2928852.0, CM084278_1_20742383.1, CM084268_1_50790925.0, CM084265_1_73060807.0, CM084268_1_18512751.0, CM084264_1_74191573.1, CM084271_1_19656061.1, CM084264_1_71816897.1, CM084266_1_58111750.0, CM084274_1_4708043.1, CM084267_1_13261449.1, CM084271_1_44086137.0, CM084279_1_32917233.1, CM084271_1_1052214.1, CM084264_1_70471577.1, CM084265_1_71925202.1, CM084275_1_42592955.1, CM084265_1_54595186.0, CM084279_1_1064680.1, CM084277_1_30631457.0, CM084276_1_20157325.0, CM084269_1_15798323.1, CM084265_1_61648598.0, CM084264_1_7131437.1, CM084272_1_1891444.0, CM084264_1_61167161.1, CM084273_1_42294202.0, CM084276_1_1510330.1",30,"adapter_trim.F1-B15-pH8.bam",-0.15,"adapter_trim.F1-B10-pH8.bam",-0.2,0.35 +"176","adapter_trim.F2-B25-pH7.bam","CM084267_1_13261449.0, CM084266_1_58087892.0, CM084272_1_2928852.0, CM084278_1_20742383.1, CM084268_1_50790925.0, CM084265_1_73060807.0, CM084268_1_18512751.0, CM084264_1_74191573.1, CM084271_1_19656061.1, CM084264_1_71816897.1, CM084266_1_58111750.0, CM084274_1_4708043.1, CM084267_1_13261449.1, CM084271_1_44086137.0, CM084279_1_32917233.1, CM084271_1_1052214.1, CM084264_1_70471577.1, CM084265_1_71925202.1, CM084275_1_42592955.1, CM084265_1_54595186.0, CM084279_1_1064680.1, CM084277_1_30631457.0, CM084276_1_20157325.0, CM084269_1_15798323.1, CM084265_1_61648598.0, CM084264_1_7131437.1, CM084272_1_1891444.0, CM084264_1_61167161.1, CM084273_1_42294202.0, CM084276_1_1510330.1",30,"adapter_trim.F1-B15-pH8.bam",-0.1,"adapter_trim.F1-B10-pH8.bam",-0.17,0.27 +"177","adapter_trim.F2-J187-pH7.bam","CM084265_1_786811.1, CM084267_1_2908957.1, CM084268_1_50681637.0, CM084276_1_37353147.1, CM084264_1_34301201.0, CM084274_1_4796888.0, CM084265_1_791030.0, CM084264_1_73931025.0, CM084275_1_529178.0, CM084265_1_14403532.1, CM084266_1_65401967.1, CM084266_1_70930072.1, CM084271_1_19934424.0, CM084271_1_3805850.1, CM084268_1_282153.1, CM084264_1_72118697.1, CM084268_1_49721854.1, CM084271_1_26325742.0, CM084265_1_71925452.1, CM084277_1_30953033.1, CM084268_1_18519472.0, CM084267_1_2163704.0, CM084267_1_5161043.1, CM084271_1_43851366.1, CM084264_1_74191573.0, CM084277_1_31027250.1, CM084264_1_70174612.0, CM084265_1_1816564.0, CM084274_1_4795052.1, CM084269_1_15826462.0",30,"adapter_trim.F1-B8-pH8.bam",-0.14,"adapter_trim.F1-B3-pH8.bam",-0.41,0.55 +"178","adapter_trim.F2-B16-pH7.bam","CM084265_1_786811.1, CM084267_1_2908957.1, CM084268_1_50681637.0, CM084276_1_37353147.1, CM084264_1_34301201.0, CM084274_1_4796888.0, CM084265_1_791030.0, CM084264_1_73931025.0, CM084275_1_529178.0, CM084265_1_14403532.1, CM084266_1_65401967.1, CM084266_1_70930072.1, CM084271_1_19934424.0, CM084271_1_3805850.1, CM084268_1_282153.1, CM084264_1_72118697.1, CM084268_1_49721854.1, CM084271_1_26325742.0, CM084265_1_71925452.1, CM084277_1_30953033.1, CM084268_1_18519472.0, CM084267_1_2163704.0, CM084267_1_5161043.1, CM084271_1_43851366.1, CM084264_1_74191573.0, CM084277_1_31027250.1, CM084264_1_70174612.0, CM084265_1_1816564.0, CM084274_1_4795052.1, CM084269_1_15826462.0",30,"adapter_trim.F1-B8-pH8.bam",-0.5,"adapter_trim.F1-B1-pH8.bam",-0.1,0.6 +"179","adapter_trim.F2-B8-pH7.bam","CM084265_1_786811.1, CM084267_1_2908957.1, CM084268_1_50681637.0, CM084276_1_37353147.1, CM084264_1_34301201.0, CM084274_1_4796888.0, CM084265_1_791030.0, CM084264_1_73931025.0, CM084275_1_529178.0, CM084265_1_14403532.1, CM084266_1_65401967.1, CM084266_1_70930072.1, CM084271_1_19934424.0, CM084271_1_3805850.1, CM084268_1_282153.1, CM084264_1_72118697.1, CM084268_1_49721854.1, CM084271_1_26325742.0, CM084265_1_71925452.1, CM084277_1_30953033.1, CM084268_1_18519472.0, CM084267_1_2163704.0, CM084267_1_5161043.1, CM084271_1_43851366.1, CM084264_1_74191573.0, CM084277_1_31027250.1, CM084264_1_70174612.0, CM084265_1_1816564.0, CM084274_1_4795052.1, CM084269_1_15826462.0",30,"adapter_trim.F1-B20-pH8.bam",-0.59,"adapter_trim.F1-B4-pH8.bam",-0.03,0.62 +"180","adapter_trim.F2-J187-pH7.bam","CM084268_1_2717677.1, CM084266_1_68661769.0, CM084279_1_10147347.0, CM084278_1_20701460.0, CM084266_1_50301468.0, CM084268_1_45613.1, CM084268_1_1508049.1, CM084267_1_4505277.1, CM084269_1_4628634.0, CM084273_1_42285391.1, CM084273_1_33585263.1, CM084278_1_14913766.1, CM084276_1_38787722.1, CM084265_1_71899680.0, CM084276_1_38450614.1, CM084269_1_1549393.1, CM084269_1_35627219.0, CM084267_1_2426163.0, CM084264_1_6517635.1, CM084267_1_700114.1, CM084266_1_65401945.1, CM084266_1_58086155.1, CM084269_1_35627100.0, CM084274_1_3688102.0, CM084268_1_298828.1, CM084266_1_57882486.1, CM084275_1_25397320.1, CM084264_1_70355125.1, CM084270_1_46587607.0, CM084264_1_61227544.0",30,"adapter_trim.F1-B8-pH8.bam",-0.37,"adapter_trim.F1-B9-pH8.bam",-0.7,1.07 +"181","adapter_trim.F2-J202-pH7.bam","CM084268_1_2717677.1, CM084266_1_68661769.0, CM084279_1_10147347.0, CM084278_1_20701460.0, CM084266_1_50301468.0, CM084268_1_45613.1, CM084268_1_1508049.1, CM084267_1_4505277.1, CM084269_1_4628634.0, CM084273_1_42285391.1, CM084273_1_33585263.1, CM084278_1_14913766.1, CM084276_1_38787722.1, CM084265_1_71899680.0, CM084276_1_38450614.1, CM084269_1_1549393.1, CM084269_1_35627219.0, CM084267_1_2426163.0, CM084264_1_6517635.1, CM084267_1_700114.1, CM084266_1_65401945.1, CM084266_1_58086155.1, CM084269_1_35627100.0, CM084274_1_3688102.0, CM084268_1_298828.1, CM084266_1_57882486.1, CM084275_1_25397320.1, CM084264_1_70355125.1, CM084270_1_46587607.0, 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CM084267_1_11257220.0, CM084275_1_40706319.0, CM084274_1_4773495.1, CM084265_1_59221309.1, CM084266_1_57888640.0, CM084266_1_67235326.0, CM084265_1_3130643.1, CM084265_1_39553350.0, CM084276_1_1855851.0, CM084275_1_675849.0, CM084265_1_1062161.1, CM084264_1_69294926.1, CM084266_1_57886490.0, CM084267_1_956424.0, CM084264_1_66439662.1, CM084275_1_319819.1, CM084275_1_38169338.1, CM084265_1_58036225.1, CM084265_1_72091635.0, CM084270_1_4751834.1, CM084274_1_4674050.0, CM084264_1_68634815.1, CM084266_1_23321836.1, CM084265_1_1118701.1, CM084273_1_31862762.1, CM084276_1_38271843.0, CM084276_1_1625258.0, CM084279_1_32915259.1",30,"adapter_trim.F1-B21-pH8.bam",-0.07,"adapter_trim.F1-B10-pH8.bam",-0.32,0.39 +"189","adapter_trim.F2-J204-pH7.bam","CM084266_1_65347060.0, CM084268_1_18512751.1, CM084265_1_73060663.0, CM084268_1_3710137.1, CM084264_1_34293018.1, CM084277_1_10628425.0, CM084272_1_44059306.0, CM084271_1_43868201.1, CM084267_1_9175849.0, CM084269_1_45423014.1, CM084264_1_66077502.0, CM084270_1_42348999.0, CM084274_1_4795062.0, CM084266_1_58086157.0, CM084270_1_4751856.0, CM084279_1_10149633.0, CM084266_1_69051092.1, CM084270_1_39396180.0, CM084276_1_38558653.0, CM084279_1_1063031.1, CM084276_1_54402.0, CM084269_1_43525440.0, CM084265_1_68807639.1, CM084272_1_9070882.0, CM084274_1_3692385.1, CM084271_1_44106803.1, CM084274_1_4868380.1, CM084275_1_524596.1, CM084269_1_43523945.0, CM084277_1_30631457.0",30,"adapter_trim.F1-B21-pH8.bam",-0.1,"adapter_trim.F1-B4-pH8.bam",-0.29,0.39 +"190","adapter_trim.F2-J224-pH7.bam","CM084266_1_65347060.0, CM084268_1_18512751.1, CM084265_1_73060663.0, CM084268_1_3710137.1, CM084264_1_34293018.1, CM084277_1_10628425.0, CM084272_1_44059306.0, CM084271_1_43868201.1, CM084267_1_9175849.0, CM084269_1_45423014.1, CM084264_1_66077502.0, CM084270_1_42348999.0, CM084274_1_4795062.0, CM084266_1_58086157.0, CM084270_1_4751856.0, CM084279_1_10149633.0, CM084266_1_69051092.1, CM084270_1_39396180.0, CM084276_1_38558653.0, CM084279_1_1063031.1, CM084276_1_54402.0, CM084269_1_43525440.0, CM084265_1_68807639.1, CM084272_1_9070882.0, CM084274_1_3692385.1, CM084271_1_44106803.1, CM084274_1_4868380.1, CM084275_1_524596.1, CM084269_1_43523945.0, CM084277_1_30631457.0",30,"adapter_trim.F1-B20-pH8.bam",-0.2,"adapter_trim.F1-B1-pH8.bam",-0.24,0.44 +"191","adapter_trim.F2-B19-pH7.bam","CM084266_1_65347060.0, CM084268_1_18512751.1, CM084265_1_73060663.0, CM084268_1_3710137.1, CM084264_1_34293018.1, CM084277_1_10628425.0, CM084272_1_44059306.0, CM084271_1_43868201.1, CM084267_1_9175849.0, CM084269_1_45423014.1, CM084264_1_66077502.0, CM084270_1_42348999.0, CM084274_1_4795062.0, CM084266_1_58086157.0, CM084270_1_4751856.0, CM084279_1_10149633.0, CM084266_1_69051092.1, CM084270_1_39396180.0, CM084276_1_38558653.0, CM084279_1_1063031.1, CM084276_1_54402.0, CM084269_1_43525440.0, CM084265_1_68807639.1, CM084272_1_9070882.0, CM084274_1_3692385.1, CM084271_1_44106803.1, CM084274_1_4868380.1, CM084275_1_524596.1, CM084269_1_43523945.0, CM084277_1_30631457.0",30,"adapter_trim.F1-B15-pH8.bam",-0.2,"adapter_trim.F1-B5-pH8.bam",-0.04,0.24 +"192","adapter_trim.F2-B8-pH7.bam","CM084266_1_65347060.0, CM084268_1_18512751.1, CM084265_1_73060663.0, CM084268_1_3710137.1, CM084264_1_34293018.1, CM084277_1_10628425.0, CM084272_1_44059306.0, CM084271_1_43868201.1, CM084267_1_9175849.0, CM084269_1_45423014.1, CM084264_1_66077502.0, CM084270_1_42348999.0, CM084274_1_4795062.0, CM084266_1_58086157.0, CM084270_1_4751856.0, CM084279_1_10149633.0, CM084266_1_69051092.1, CM084270_1_39396180.0, CM084276_1_38558653.0, CM084279_1_1063031.1, CM084276_1_54402.0, CM084269_1_43525440.0, CM084265_1_68807639.1, CM084272_1_9070882.0, CM084274_1_3692385.1, CM084271_1_44106803.1, CM084274_1_4868380.1, CM084275_1_524596.1, CM084269_1_43523945.0, CM084277_1_30631457.0",30,"adapter_trim.F1-B8-pH8.bam",-0.42,"adapter_trim.F1-B9-pH8.bam",-0.17,0.59 +"193","adapter_trim.F2-J201-pH7.bam","CM084276_1_38117387.0, CM084274_1_4708745.0, CM084268_1_49721854.0, CM084264_1_66561947.1, CM084264_1_68685021.1, CM084266_1_58102684.0, CM084267_1_1134553.1, CM084271_1_43547024.0, CM084264_1_70173621.0, CM084265_1_73060812.0, CM084272_1_33453891.0, CM084264_1_26771547.1, CM084279_1_32673936.0, CM084276_1_935645.1, CM084279_1_32641182.0, CM084271_1_44091713.1, CM084274_1_4792130.0, CM084268_1_3699581.1, CM084266_1_57882838.0, CM084269_1_45310961.1, CM084278_1_20734507.0, CM084271_1_44075853.0, CM084265_1_73060895.0, CM084264_1_5215232.1, CM084274_1_4868385.1, CM084266_1_57882838.0, CM084269_1_4625303.1, CM084264_1_64269877.1, CM084273_1_31866838.1, CM084271_1_44091708.0",30,"adapter_trim.F1-B8-pH8.bam",-0.11,"adapter_trim.F1-B9-pH8.bam",-0.47,0.58 +"194","adapter_trim.F2-J204-pH7.bam","CM084276_1_38117387.0, CM084274_1_4708745.0, CM084268_1_49721854.0, CM084264_1_66561947.1, CM084264_1_68685021.1, CM084266_1_58102684.0, CM084267_1_1134553.1, CM084271_1_43547024.0, CM084264_1_70173621.0, CM084265_1_73060812.0, CM084272_1_33453891.0, CM084264_1_26771547.1, CM084279_1_32673936.0, CM084276_1_935645.1, CM084279_1_32641182.0, CM084271_1_44091713.1, CM084274_1_4792130.0, CM084268_1_3699581.1, CM084266_1_57882838.0, CM084269_1_45310961.1, CM084278_1_20734507.0, CM084271_1_44075853.0, CM084265_1_73060895.0, CM084264_1_5215232.1, CM084274_1_4868385.1, CM084266_1_57882838.0, CM084269_1_4625303.1, CM084264_1_64269877.1, CM084273_1_31866838.1, CM084271_1_44091708.0",30,"adapter_trim.F1-B20-pH8.bam",0,"adapter_trim.F1-B4-pH8.bam",0.17,0.17 +"195","adapter_trim.F2-J223-pH7.bam","CM084276_1_38117387.0, CM084274_1_4708745.0, CM084268_1_49721854.0, CM084264_1_66561947.1, CM084264_1_68685021.1, CM084266_1_58102684.0, CM084267_1_1134553.1, CM084271_1_43547024.0, CM084264_1_70173621.0, CM084265_1_73060812.0, CM084272_1_33453891.0, CM084264_1_26771547.1, CM084279_1_32673936.0, CM084276_1_935645.1, CM084279_1_32641182.0, CM084271_1_44091713.1, CM084274_1_4792130.0, CM084268_1_3699581.1, CM084266_1_57882838.0, CM084269_1_45310961.1, CM084278_1_20734507.0, CM084271_1_44075853.0, CM084265_1_73060895.0, CM084264_1_5215232.1, CM084274_1_4868385.1, CM084266_1_57882838.0, CM084269_1_4625303.1, CM084264_1_64269877.1, CM084273_1_31866838.1, CM084271_1_44091708.0",30,"adapter_trim.F1-B25-pH8.bam",-0.23,"adapter_trim.F1-B11-pH8.bam",-0.4,0.63 +"196","adapter_trim.F2-J227-pH7.bam","CM084276_1_38117387.0, CM084274_1_4708745.0, CM084268_1_49721854.0, CM084264_1_66561947.1, CM084264_1_68685021.1, CM084266_1_58102684.0, CM084267_1_1134553.1, CM084271_1_43547024.0, CM084264_1_70173621.0, CM084265_1_73060812.0, CM084272_1_33453891.0, CM084264_1_26771547.1, CM084279_1_32673936.0, CM084276_1_935645.1, CM084279_1_32641182.0, CM084271_1_44091713.1, CM084274_1_4792130.0, CM084268_1_3699581.1, CM084266_1_57882838.0, CM084269_1_45310961.1, CM084278_1_20734507.0, CM084271_1_44075853.0, CM084265_1_73060895.0, CM084264_1_5215232.1, CM084274_1_4868385.1, CM084266_1_57882838.0, CM084269_1_4625303.1, CM084264_1_64269877.1, CM084273_1_31866838.1, CM084271_1_44091708.0",30,"adapter_trim.F1-B20-pH8.bam",-0.14,"adapter_trim.F1-B11-pH8.bam",-0.21,0.35 +"197","adapter_trim.F2-B8-pH7.bam","CM084276_1_38117387.0, CM084274_1_4708745.0, CM084268_1_49721854.0, CM084264_1_66561947.1, CM084264_1_68685021.1, CM084266_1_58102684.0, CM084267_1_1134553.1, CM084271_1_43547024.0, CM084264_1_70173621.0, CM084265_1_73060812.0, CM084272_1_33453891.0, CM084264_1_26771547.1, CM084279_1_32673936.0, CM084276_1_935645.1, CM084279_1_32641182.0, CM084271_1_44091713.1, CM084274_1_4792130.0, CM084268_1_3699581.1, CM084266_1_57882838.0, CM084269_1_45310961.1, CM084278_1_20734507.0, CM084271_1_44075853.0, CM084265_1_73060895.0, CM084264_1_5215232.1, CM084274_1_4868385.1, CM084266_1_57882838.0, CM084269_1_4625303.1, CM084264_1_64269877.1, CM084273_1_31866838.1, CM084271_1_44091708.0",30,"adapter_trim.F1-B20-pH8.bam",-0.43,"adapter_trim.F1-B1-pH8.bam",0.05,0.48 +"198","adapter_trim.F2-J224-pH7.bam","CM084268_1_2720906.1, CM084275_1_40519747.0, CM084278_1_281238.1, CM084270_1_46587616.1, CM084277_1_29781979.0, CM084269_1_4635090.1, CM084268_1_28858766.0, CM084266_1_70181797.0, CM084274_1_4778609.0, CM084267_1_52593725.1, CM084264_1_74076720.1, CM084276_1_25809477.1, CM084264_1_72054055.1, CM084275_1_36059096.0, CM084265_1_59221275.1, CM084274_1_3692385.1, CM084268_1_50323442.1, CM084264_1_73929737.1, CM084269_1_45438499.0, CM084275_1_23095998.0, CM084273_1_31865717.1, CM084275_1_400249.0, CM084276_1_25975836.0, CM084271_1_44069759.1, CM084277_1_1869733.0, CM084271_1_3820373.0, CM084271_1_379052.1, CM084266_1_57884809.0, CM084271_1_11500058.1, CM084269_1_43524375.0",30,"adapter_trim.F1-B21-pH8.bam",-0.12,"adapter_trim.F1-B9-pH8.bam",-0.01,0.13 +"199","adapter_trim.F2-J206-pH7.bam","CM084271_1_3820382.0, CM084265_1_61648709.1, CM084264_1_70182851.0, CM084274_1_4708745.0, CM084274_1_42859635.1, CM084269_1_15799394.0, CM084266_1_59802412.1, CM084274_1_4694551.0, CM084267_1_2652526.1, CM084269_1_12905566.1, CM084265_1_72368204.0, CM084275_1_312956.0, CM084265_1_70800987.1, CM084278_1_22665042.1, CM084268_1_3703420.1, CM084266_1_69051092.1, CM084276_1_11709759.0, CM084276_1_1510348.0, CM084267_1_6420945.1, CM084275_1_39502397.0, CM084266_1_69793914.1, CM084279_1_10150670.0, CM084267_1_6420929.0, CM084264_1_73929737.1, CM084278_1_20625152.1, CM084273_1_31862642.1, CM084279_1_1063045.1, CM084276_1_38772790.0, CM084268_1_50323846.0, CM084278_1_22654264.1",30,"adapter_trim.F1-B15-pH8.bam",-0.21,"adapter_trim.F1-B10-pH8.bam",-0.37,0.58 +"200","adapter_trim.F2-J224-pH7.bam","CM084271_1_3820382.0, CM084265_1_61648709.1, CM084264_1_70182851.0, CM084274_1_4708745.0, CM084274_1_42859635.1, CM084269_1_15799394.0, CM084266_1_59802412.1, CM084274_1_4694551.0, CM084267_1_2652526.1, CM084269_1_12905566.1, CM084265_1_72368204.0, CM084275_1_312956.0, CM084265_1_70800987.1, CM084278_1_22665042.1, CM084268_1_3703420.1, CM084266_1_69051092.1, CM084276_1_11709759.0, CM084276_1_1510348.0, CM084267_1_6420945.1, CM084275_1_39502397.0, CM084266_1_69793914.1, CM084279_1_10150670.0, CM084267_1_6420929.0, CM084264_1_73929737.1, CM084278_1_20625152.1, CM084273_1_31862642.1, CM084279_1_1063045.1, CM084276_1_38772790.0, CM084268_1_50323846.0, CM084278_1_22654264.1",30,"adapter_trim.F1-B20-pH8.bam",0.28,"adapter_trim.F1-B8-pH8.bam",-0.06,0.34 +"201","adapter_trim.F2-B16-pH7.bam","CM084271_1_3820382.0, CM084265_1_61648709.1, CM084264_1_70182851.0, CM084274_1_4708745.0, CM084274_1_42859635.1, CM084269_1_15799394.0, CM084266_1_59802412.1, CM084274_1_4694551.0, CM084267_1_2652526.1, CM084269_1_12905566.1, CM084265_1_72368204.0, CM084275_1_312956.0, CM084265_1_70800987.1, CM084278_1_22665042.1, CM084268_1_3703420.1, CM084266_1_69051092.1, CM084276_1_11709759.0, CM084276_1_1510348.0, CM084267_1_6420945.1, CM084275_1_39502397.0, CM084266_1_69793914.1, CM084279_1_10150670.0, CM084267_1_6420929.0, CM084264_1_73929737.1, CM084278_1_20625152.1, CM084273_1_31862642.1, CM084279_1_1063045.1, CM084276_1_38772790.0, CM084268_1_50323846.0, CM084278_1_22654264.1",30,"adapter_trim.F1-B8-pH8.bam",-0.27,"adapter_trim.F1-B1-pH8.bam",-0.48,0.75 +"202","adapter_trim.F2-B7-pH7.bam","CM084271_1_3820382.0, CM084265_1_61648709.1, CM084264_1_70182851.0, CM084274_1_4708745.0, CM084274_1_42859635.1, CM084269_1_15799394.0, CM084266_1_59802412.1, CM084274_1_4694551.0, CM084267_1_2652526.1, CM084269_1_12905566.1, CM084265_1_72368204.0, CM084275_1_312956.0, CM084265_1_70800987.1, CM084278_1_22665042.1, CM084268_1_3703420.1, CM084266_1_69051092.1, CM084276_1_11709759.0, CM084276_1_1510348.0, CM084267_1_6420945.1, CM084275_1_39502397.0, CM084266_1_69793914.1, CM084279_1_10150670.0, CM084267_1_6420929.0, CM084264_1_73929737.1, CM084278_1_20625152.1, CM084273_1_31862642.1, CM084279_1_1063045.1, CM084276_1_38772790.0, CM084268_1_50323846.0, CM084278_1_22654264.1",30,"adapter_trim.F1-B15-pH8.bam",-0.27,"adapter_trim.F1-B11-pH8.bam",-0.41,0.68 +"203","adapter_trim.F2-J224-pH7.bam","CM084269_1_40447978.0, CM084273_1_42287132.0, CM084272_1_1883699.0, CM084269_1_46745707.1, CM084276_1_37352422.0, CM084264_1_68689028.0, CM084271_1_44134607.0, CM084278_1_20865574.1, CM084279_1_32652113.0, CM084266_1_58087893.0, CM084264_1_61167131.0, CM084266_1_23321829.1, CM084265_1_59221383.0, CM084270_1_32126729.0, CM084270_1_47077551.1, CM084268_1_28845855.1, CM084267_1_6420945.1, CM084270_1_4751873.0, CM084271_1_274033.1, CM084265_1_1062091.1, CM084268_1_50693767.0, CM084275_1_660866.0, CM084276_1_38772835.0, CM084265_1_50947034.0, CM084278_1_22664889.0, CM084278_1_20858390.0, CM084275_1_524594.0, CM084274_1_4694230.1, CM084272_1_36474242.1, CM084275_1_2509498.1",30,"adapter_trim.F1-B20-pH8.bam",-0.19,"adapter_trim.F1-B5-pH8.bam",-0.16,0.35 +"204","adapter_trim.F2-J185-pH7.bam","CM084265_1_71925203.1, CM084279_1_1063031.1, CM084264_1_74266357.0, CM084264_1_34301630.1, CM084266_1_69632417.1, CM084264_1_74266371.1, CM084275_1_39776646.0, CM084269_1_1577700.0, CM084265_1_39553350.1, CM084271_1_44069759.1, CM084274_1_4734039.0, CM084268_1_2720906.1, CM084268_1_49721842.1, CM084278_1_22667324.0, CM084270_1_19461856.1, CM084271_1_3821109.0, CM084265_1_73061238.1, CM084270_1_46587591.1, CM084279_1_31409261.1, CM084270_1_42349010.0, CM084277_1_30953045.1, CM084267_1_51366722.0, CM084268_1_1508049.0, CM084278_1_25832327.1, CM084274_1_4863175.0, CM084265_1_70974986.0, CM084279_1_1512885.0, CM084274_1_5120580.1, CM084264_1_70175545.1, CM084276_1_25532347.0",30,"adapter_trim.F1-B21-pH8.bam",0.29,"adapter_trim.F1-B3-pH8.bam",-0.03,0.32 +"205","adapter_trim.F2-J187-pH7.bam","CM084265_1_71925203.1, CM084279_1_1063031.1, CM084264_1_74266357.0, CM084264_1_34301630.1, CM084266_1_69632417.1, CM084264_1_74266371.1, CM084275_1_39776646.0, CM084269_1_1577700.0, CM084265_1_39553350.1, CM084271_1_44069759.1, CM084274_1_4734039.0, CM084268_1_2720906.1, CM084268_1_49721842.1, CM084278_1_22667324.0, CM084270_1_19461856.1, CM084271_1_3821109.0, CM084265_1_73061238.1, CM084270_1_46587591.1, CM084279_1_31409261.1, CM084270_1_42349010.0, CM084277_1_30953045.1, CM084267_1_51366722.0, CM084268_1_1508049.0, CM084278_1_25832327.1, CM084274_1_4863175.0, CM084265_1_70974986.0, CM084279_1_1512885.0, CM084274_1_5120580.1, CM084264_1_70175545.1, CM084276_1_25532347.0",30,"adapter_trim.F1-B20-pH8.bam",-0.61,"adapter_trim.F1-B1-pH8.bam",0.26,0.87 +"206","adapter_trim.F2-J201-pH7.bam","CM084265_1_71925203.1, CM084279_1_1063031.1, CM084264_1_74266357.0, CM084264_1_34301630.1, CM084266_1_69632417.1, CM084264_1_74266371.1, CM084275_1_39776646.0, CM084269_1_1577700.0, CM084265_1_39553350.1, CM084271_1_44069759.1, CM084274_1_4734039.0, CM084268_1_2720906.1, CM084268_1_49721842.1, CM084278_1_22667324.0, CM084270_1_19461856.1, CM084271_1_3821109.0, CM084265_1_73061238.1, CM084270_1_46587591.1, CM084279_1_31409261.1, CM084270_1_42349010.0, CM084277_1_30953045.1, CM084267_1_51366722.0, CM084268_1_1508049.0, CM084278_1_25832327.1, CM084274_1_4863175.0, CM084265_1_70974986.0, 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CM084269_1_47265300.0, CM084268_1_50202339.0, CM084279_1_10159270.1, CM084264_1_68689028.1, CM084275_1_120896.0, CM084269_1_47265300.1, CM084267_1_2908962.0, CM084276_1_56673.0, CM084265_1_24901885.1, CM084269_1_1580179.0, CM084273_1_32698886.1, CM084265_1_64735335.1, CM084266_1_69089438.1, CM084266_1_68661769.0, CM084274_1_4863041.1, CM084271_1_26325720.1, CM084264_1_73926179.0, CM084265_1_64581822.0, CM084275_1_272975.0",30,"adapter_trim.F1-B15-pH8.bam",0.17,"adapter_trim.F1-B1-pH8.bam",-0.08,0.25 +"221","adapter_trim.F2-B19-pH7.bam","CM084267_1_48167433.1, CM084274_1_4863902.0, CM084274_1_4694578.0, CM084276_1_25532347.1, CM084267_1_52776062.1, CM084266_1_71148884.1, CM084278_1_24948349.0, CM084276_1_12392697.1, CM084264_1_34291216.0, CM084266_1_57882079.0, CM084269_1_1556132.0, CM084269_1_47265300.0, CM084268_1_50202339.0, CM084279_1_10159270.1, CM084264_1_68689028.1, CM084275_1_120896.0, CM084269_1_47265300.1, CM084267_1_2908962.0, CM084276_1_56673.0, CM084265_1_24901885.1, CM084269_1_1580179.0, CM084273_1_32698886.1, CM084265_1_64735335.1, CM084266_1_69089438.1, CM084266_1_68661769.0, CM084274_1_4863041.1, CM084271_1_26325720.1, CM084264_1_73926179.0, CM084265_1_64581822.0, CM084275_1_272975.0",30,"adapter_trim.F1-B20-pH8.bam",-0.4,"adapter_trim.F1-B8-pH8.bam",-0.19,0.59 +"222","adapter_trim.F2-J185-pH7.bam","CM084268_1_28845816.1, CM084274_1_42855653.1, CM084264_1_66439662.0, CM084278_1_5142968.0, CM084279_1_32666444.1, CM084265_1_64196870.1, CM084274_1_4793084.0, CM084267_1_6421243.1, CM084276_1_54402.0, CM084279_1_1063045.1, CM084266_1_69063996.0, CM084279_1_32666409.0, CM084274_1_12659113.0, CM084279_1_1064680.0, CM084271_1_1033797.1, CM084267_1_699277.0, CM084265_1_69916749.0, CM084266_1_23296704.1, CM084264_1_26773648.1, CM084275_1_1304711.1, CM084269_1_39736991.0, CM084264_1_2737867.0, CM084269_1_12905597.0, CM084267_1_2908130.1, CM084279_1_1062150.1, CM084272_1_7002400.1, CM084268_1_3710137.0, CM084271_1_44134607.1, CM084266_1_57882817.0, CM084265_1_73059931.1",30,"adapter_trim.F1-B21-pH8.bam",-0.7,"adapter_trim.F1-B8-pH8.bam",-0.37,1.07 +"223","adapter_trim.F2-J204-pH7.bam","CM084268_1_28845816.1, CM084274_1_42855653.1, CM084264_1_66439662.0, CM084278_1_5142968.0, CM084279_1_32666444.1, CM084265_1_64196870.1, CM084274_1_4793084.0, CM084267_1_6421243.1, CM084276_1_54402.0, CM084279_1_1063045.1, CM084266_1_69063996.0, CM084279_1_32666409.0, CM084274_1_12659113.0, CM084279_1_1064680.0, CM084271_1_1033797.1, CM084267_1_699277.0, CM084265_1_69916749.0, CM084266_1_23296704.1, CM084264_1_26773648.1, CM084275_1_1304711.1, CM084269_1_39736991.0, CM084264_1_2737867.0, CM084269_1_12905597.0, CM084267_1_2908130.1, CM084279_1_1062150.1, CM084272_1_7002400.1, CM084268_1_3710137.0, CM084271_1_44134607.1, CM084266_1_57882817.0, CM084265_1_73059931.1",30,"adapter_trim.F1-B25-pH8.bam",0.07,"adapter_trim.F1-B11-pH8.bam",0.09,0.16 +"224","adapter_trim.F2-J206-pH7.bam","CM084268_1_28845816.1, CM084274_1_42855653.1, CM084264_1_66439662.0, CM084278_1_5142968.0, CM084279_1_32666444.1, CM084265_1_64196870.1, CM084274_1_4793084.0, CM084267_1_6421243.1, CM084276_1_54402.0, CM084279_1_1063045.1, CM084266_1_69063996.0, CM084279_1_32666409.0, CM084274_1_12659113.0, CM084279_1_1064680.0, CM084271_1_1033797.1, CM084267_1_699277.0, CM084265_1_69916749.0, CM084266_1_23296704.1, CM084264_1_26773648.1, CM084275_1_1304711.1, CM084269_1_39736991.0, CM084264_1_2737867.0, CM084269_1_12905597.0, CM084267_1_2908130.1, CM084279_1_1062150.1, CM084272_1_7002400.1, CM084268_1_3710137.0, CM084271_1_44134607.1, CM084266_1_57882817.0, CM084265_1_73059931.1",30,"adapter_trim.F1-B15-pH8.bam",-0.13,"adapter_trim.F1-B1-pH8.bam",-0.15,0.28 +"225","adapter_trim.F2-B2-pH7.bam","CM084268_1_28845816.1, CM084274_1_42855653.1, CM084264_1_66439662.0, CM084278_1_5142968.0, CM084279_1_32666444.1, CM084265_1_64196870.1, CM084274_1_4793084.0, CM084267_1_6421243.1, CM084276_1_54402.0, CM084279_1_1063045.1, CM084266_1_69063996.0, CM084279_1_32666409.0, CM084274_1_12659113.0, CM084279_1_1064680.0, CM084271_1_1033797.1, CM084267_1_699277.0, CM084265_1_69916749.0, CM084266_1_23296704.1, CM084264_1_26773648.1, CM084275_1_1304711.1, CM084269_1_39736991.0, CM084264_1_2737867.0, CM084269_1_12905597.0, CM084267_1_2908130.1, CM084279_1_1062150.1, CM084272_1_7002400.1, CM084268_1_3710137.0, CM084271_1_44134607.1, CM084266_1_57882817.0, CM084265_1_73059931.1",30,"adapter_trim.F1-B15-pH8.bam",-0.23,"adapter_trim.F1-B4-pH8.bam",-0.46,0.69 +"226","adapter_trim.F2-J165-pH7.bam","CM084276_1_25975836.0, CM084267_1_52593733.1, CM084266_1_70930072.1, CM084269_1_40338569.1, CM084275_1_400325.1, CM084264_1_69902963.1, CM084268_1_28845823.0, CM084272_1_2928852.0, CM084265_1_70597838.0, CM084271_1_3814146.1, CM084268_1_298828.0, CM084266_1_62462208.0, CM084278_1_22667297.1, CM084272_1_18194019.1, CM084264_1_70210132.1, CM084275_1_23104495.1, CM084268_1_42211.0, CM084265_1_791018.1, CM084268_1_298828.0, CM084265_1_71797896.0, CM084274_1_29871125.1, CM084271_1_43849282.1, CM084276_1_31737936.0, CM084274_1_34977132.0, CM084270_1_9411945.0, CM084269_1_43525399.1, CM084277_1_30168398.1, CM084271_1_44104300.0, CM084279_1_10151202.0, CM084279_1_33759502.0",30,"adapter_trim.F1-B8-pH8.bam",-0.04,"adapter_trim.F1-B3-pH8.bam",-0.27,0.31 +"227","adapter_trim.F2-J204-pH7.bam","CM084276_1_25975836.0, CM084267_1_52593733.1, CM084266_1_70930072.1, CM084269_1_40338569.1, CM084275_1_400325.1, CM084264_1_69902963.1, CM084268_1_28845823.0, CM084272_1_2928852.0, CM084265_1_70597838.0, CM084271_1_3814146.1, CM084268_1_298828.0, CM084266_1_62462208.0, CM084278_1_22667297.1, CM084272_1_18194019.1, CM084264_1_70210132.1, CM084275_1_23104495.1, CM084268_1_42211.0, CM084265_1_791018.1, CM084268_1_298828.0, CM084265_1_71797896.0, CM084274_1_29871125.1, CM084271_1_43849282.1, CM084276_1_31737936.0, CM084274_1_34977132.0, CM084270_1_9411945.0, CM084269_1_43525399.1, CM084277_1_30168398.1, CM084271_1_44104300.0, CM084279_1_10151202.0, CM084279_1_33759502.0",30,"adapter_trim.F1-B21-pH8.bam",-0.12,"adapter_trim.F1-B10-pH8.bam",0,0.12 +"228","adapter_trim.F2-J221-pH7.bam","CM084276_1_25975836.0, CM084267_1_52593733.1, CM084266_1_70930072.1, CM084269_1_40338569.1, CM084275_1_400325.1, CM084264_1_69902963.1, CM084268_1_28845823.0, CM084272_1_2928852.0, CM084265_1_70597838.0, CM084271_1_3814146.1, CM084268_1_298828.0, CM084266_1_62462208.0, CM084278_1_22667297.1, CM084272_1_18194019.1, CM084264_1_70210132.1, CM084275_1_23104495.1, CM084268_1_42211.0, CM084265_1_791018.1, CM084268_1_298828.0, CM084265_1_71797896.0, CM084274_1_29871125.1, CM084271_1_43849282.1, CM084276_1_31737936.0, CM084274_1_34977132.0, CM084270_1_9411945.0, CM084269_1_43525399.1, CM084277_1_30168398.1, CM084271_1_44104300.0, CM084279_1_10151202.0, CM084279_1_33759502.0",30,"adapter_trim.F1-B25-pH8.bam",-0.24,"adapter_trim.F1-B7-pH8.bam",-0.67,0.91 +"229","adapter_trim.F2-J223-pH7.bam","CM084278_1_5142968.1, CM084268_1_28845789.0, CM084265_1_70595159.1, CM084265_1_54591384.0, CM084266_1_65576820.0, CM084277_1_30168380.1, CM084271_1_289999.1, CM084279_1_10159275.0, CM084276_1_1856902.1, CM084276_1_1500490.1, CM084265_1_71265328.1, CM084264_1_74035910.1, CM084265_1_70577871.1, CM084265_1_73059931.1, CM084267_1_52092644.1, CM084271_1_379028.1, CM084268_1_42863.1, CM084274_1_4708223.1, CM084268_1_276461.1, CM084279_1_992716.1, CM084272_1_18194972.0, CM084266_1_71319410.1, CM084279_1_10150695.0, CM084271_1_342830.0, CM084264_1_73886234.1, CM084267_1_2908860.1, CM084268_1_1508049.0, CM084268_1_3699589.1, CM084271_1_19655226.0, CM084269_1_46693817.1",30,"adapter_trim.F1-B25-pH8.bam",0.06,"adapter_trim.F1-B11-pH8.bam",0.05,0.11 +"230","adapter_trim.F2-B1-pH7.bam","CM084278_1_5142968.1, CM084268_1_28845789.0, CM084265_1_70595159.1, CM084265_1_54591384.0, CM084266_1_65576820.0, CM084277_1_30168380.1, CM084271_1_289999.1, CM084279_1_10159275.0, CM084276_1_1856902.1, CM084276_1_1500490.1, CM084265_1_71265328.1, CM084264_1_74035910.1, CM084265_1_70577871.1, CM084265_1_73059931.1, CM084267_1_52092644.1, CM084271_1_379028.1, CM084268_1_42863.1, CM084274_1_4708223.1, CM084268_1_276461.1, CM084279_1_992716.1, CM084272_1_18194972.0, CM084266_1_71319410.1, CM084279_1_10150695.0, CM084271_1_342830.0, CM084264_1_73886234.1, CM084267_1_2908860.1, CM084268_1_1508049.0, CM084268_1_3699589.1, CM084271_1_19655226.0, CM084269_1_46693817.1",30,"adapter_trim.F1-B21-pH8.bam",-0.34,"adapter_trim.F1-B4-pH8.bam",-0.18,0.52 +"231","adapter_trim.F2-J204-pH7.bam","CM084274_1_5566177.0, CM084271_1_43851333.0, CM084265_1_69230172.0, CM084276_1_38773493.0, CM084277_1_30168398.1, CM084264_1_74989681.1, CM084269_1_15817354.0, CM084271_1_3820355.1, CM084273_1_10424357.1, CM084265_1_70595159.0, CM084266_1_57882817.1, CM084267_1_2908852.0, CM084275_1_40706319.0, CM084264_1_69303583.1, CM084278_1_14913766.0, CM084264_1_26773675.0, CM084271_1_44105575.1, CM084277_1_5803906.0, CM084264_1_8098035.0, CM084270_1_32126731.0, CM084270_1_46587616.0, CM084271_1_1033797.0, CM084269_1_46693817.1, CM084268_1_50693767.0, CM084264_1_6517724.0, CM084274_1_4726638.0, CM084276_1_38558546.0, CM084270_1_10495951.1, CM084270_1_8444546.1, CM084275_1_675849.0",30,"adapter_trim.F1-B20-pH8.bam",0.14,"adapter_trim.F1-B5-pH8.bam",-0.26,0.4 +"232","adapter_trim.F2-J224-pH7.bam","CM084274_1_5566177.0, CM084271_1_43851333.0, CM084265_1_69230172.0, CM084276_1_38773493.0, CM084277_1_30168398.1, CM084264_1_74989681.1, CM084269_1_15817354.0, CM084271_1_3820355.1, CM084273_1_10424357.1, CM084265_1_70595159.0, CM084266_1_57882817.1, CM084267_1_2908852.0, CM084275_1_40706319.0, CM084264_1_69303583.1, CM084278_1_14913766.0, CM084264_1_26773675.0, CM084271_1_44105575.1, CM084277_1_5803906.0, CM084264_1_8098035.0, CM084270_1_32126731.0, CM084270_1_46587616.0, CM084271_1_1033797.0, CM084269_1_46693817.1, CM084268_1_50693767.0, CM084264_1_6517724.0, CM084274_1_4726638.0, CM084276_1_38558546.0, CM084270_1_10495951.1, CM084270_1_8444546.1, CM084275_1_675849.0",30,"adapter_trim.F1-B20-pH8.bam",-0.12,"adapter_trim.F1-B10-pH8.bam",-0.13,0.25 +"233","adapter_trim.F2-J186-pH7.bam","CM084267_1_8118654.1, CM084268_1_50681646.0, CM084271_1_274096.1, CM084274_1_4694190.1, CM084271_1_44090335.1, CM084265_1_71831292.1, CM084275_1_524614.0, CM084265_1_69230159.1, CM084267_1_2426144.0, CM084274_1_12659015.1, CM084274_1_34977105.0, CM084271_1_3823416.1, CM084264_1_74266355.0, CM084270_1_4920911.0, CM084264_1_74273479.0, CM084276_1_37353154.1, CM084272_1_9070882.0, CM084264_1_2740285.1, CM084264_1_74800272.0, CM084275_1_39776469.0, CM084269_1_45420488.1, CM084266_1_71166412.1, CM084267_1_51346515.1, CM084265_1_65322123.0, CM084270_1_8242343.1, CM084274_1_41688611.1, CM084271_1_760000.1, CM084264_1_70175545.1, CM084266_1_68910397.1, CM084274_1_4708733.0",30,"adapter_trim.F1-B20-pH8.bam",-0.28,"adapter_trim.F1-B5-pH8.bam",-0.42,0.7 +"234","adapter_trim.F2-J187-pH7.bam","CM084267_1_8118654.1, CM084268_1_50681646.0, CM084271_1_274096.1, CM084274_1_4694190.1, CM084271_1_44090335.1, CM084265_1_71831292.1, CM084275_1_524614.0, CM084265_1_69230159.1, CM084267_1_2426144.0, CM084274_1_12659015.1, CM084274_1_34977105.0, CM084271_1_3823416.1, CM084264_1_74266355.0, CM084270_1_4920911.0, CM084264_1_74273479.0, CM084276_1_37353154.1, CM084272_1_9070882.0, CM084264_1_2740285.1, CM084264_1_74800272.0, CM084275_1_39776469.0, CM084269_1_45420488.1, CM084266_1_71166412.1, CM084267_1_51346515.1, CM084265_1_65322123.0, CM084270_1_8242343.1, CM084274_1_41688611.1, CM084271_1_760000.1, CM084264_1_70175545.1, CM084266_1_68910397.1, CM084274_1_4708733.0",30,"adapter_trim.F1-B20-pH8.bam",-0.11,"adapter_trim.F1-B7-pH8.bam",-0.31,0.42 +"235","adapter_trim.F2-B19-pH7.bam","CM084267_1_8118654.1, CM084268_1_50681646.0, CM084271_1_274096.1, CM084274_1_4694190.1, CM084271_1_44090335.1, CM084265_1_71831292.1, CM084275_1_524614.0, CM084265_1_69230159.1, CM084267_1_2426144.0, CM084274_1_12659015.1, CM084274_1_34977105.0, CM084271_1_3823416.1, CM084264_1_74266355.0, CM084270_1_4920911.0, CM084264_1_74273479.0, CM084276_1_37353154.1, CM084272_1_9070882.0, CM084264_1_2740285.1, CM084264_1_74800272.0, CM084275_1_39776469.0, CM084269_1_45420488.1, CM084266_1_71166412.1, CM084267_1_51346515.1, CM084265_1_65322123.0, CM084270_1_8242343.1, CM084274_1_41688611.1, CM084271_1_760000.1, CM084264_1_70175545.1, CM084266_1_68910397.1, CM084274_1_4708733.0",30,"adapter_trim.F1-B21-pH8.bam",-0.19,"adapter_trim.F1-B3-pH8.bam",-0.36,0.55 +"236","adapter_trim.F2-B12-pH7.bam","CM084273_1_31863596.0, CM084267_1_52112064.1, CM084268_1_82411.0, CM084268_1_42089.0, CM084265_1_61648598.1, CM084264_1_34301153.0, CM084273_1_42252907.0, CM084265_1_64784804.1, CM084271_1_44190417.1, CM084264_1_34294397.0, CM084279_1_32666409.1, CM084271_1_1033788.0, CM084266_1_69315495.1, CM084264_1_69903182.0, CM084279_1_10156977.1, CM084272_1_33607000.0, CM084274_1_4796888.1, CM084267_1_2653035.0, CM084271_1_19655226.1, CM084276_1_25975836.0, CM084272_1_2072734.0, CM084265_1_60316158.0, CM084264_1_6956767.1, CM084269_1_15809862.0, CM084273_1_31863355.0, CM084267_1_2653035.0, CM084268_1_3692649.0, CM084266_1_71148891.1, CM084268_1_3699577.1, CM084266_1_64002578.0",30,"adapter_trim.F1-B8-pH8.bam",-0.26,"adapter_trim.F1-B1-pH8.bam",-0.02,0.28 +"237","adapter_trim.F2-B7-pH7.bam","CM084273_1_31863596.0, CM084267_1_52112064.1, CM084268_1_82411.0, CM084268_1_42089.0, CM084265_1_61648598.1, CM084264_1_34301153.0, CM084273_1_42252907.0, CM084265_1_64784804.1, CM084271_1_44190417.1, CM084264_1_34294397.0, CM084279_1_32666409.1, CM084271_1_1033788.0, CM084266_1_69315495.1, CM084264_1_69903182.0, CM084279_1_10156977.1, CM084272_1_33607000.0, CM084274_1_4796888.1, CM084267_1_2653035.0, CM084271_1_19655226.1, CM084276_1_25975836.0, CM084272_1_2072734.0, CM084265_1_60316158.0, CM084264_1_6956767.1, CM084269_1_15809862.0, CM084273_1_31863355.0, CM084267_1_2653035.0, CM084268_1_3692649.0, CM084266_1_71148891.1, CM084268_1_3699577.1, CM084266_1_64002578.0",30,"adapter_trim.F1-B8-pH8.bam",-0.13,"adapter_trim.F1-B5-pH8.bam",-0.2,0.33 +"238","adapter_trim.F2-J185-pH7.bam","CM084277_1_18535852.1, CM084278_1_20732803.0, CM084267_1_6421632.1, CM084264_1_74800241.1, CM084266_1_68642404.1, CM084272_1_25266666.1, CM084269_1_41819713.0, CM084277_1_31296163.0, CM084267_1_5165677.1, CM084268_1_1326636.1, CM084270_1_39395913.1, CM084276_1_2874158.1, CM084267_1_52112064.0, CM084272_1_33453681.0, CM084272_1_33578227.0, CM084264_1_26773650.0, CM084274_1_4869924.0, CM084276_1_1510330.0, CM084266_1_65576934.1, CM084271_1_43851333.1, CM084272_1_33453892.0, CM084269_1_15828545.0, CM084265_1_59221309.1, CM084265_1_1229890.0, CM084276_1_6688311.1, CM084266_1_58087045.1, CM084266_1_69315458.0, CM084270_1_47076316.0, CM084274_1_4862958.0, CM084265_1_64969584.1",30,"adapter_trim.F1-B20-pH8.bam",0.02,"adapter_trim.F1-B5-pH8.bam",-0.04,0.06 +"239","adapter_trim.F2-J201-pH7.bam","CM084277_1_18535852.1, CM084278_1_20732803.0, CM084267_1_6421632.1, CM084264_1_74800241.1, CM084266_1_68642404.1, CM084272_1_25266666.1, CM084269_1_41819713.0, CM084277_1_31296163.0, CM084267_1_5165677.1, CM084268_1_1326636.1, CM084270_1_39395913.1, CM084276_1_2874158.1, CM084267_1_52112064.0, CM084272_1_33453681.0, CM084272_1_33578227.0, CM084264_1_26773650.0, CM084274_1_4869924.0, CM084276_1_1510330.0, CM084266_1_65576934.1, CM084271_1_43851333.1, CM084272_1_33453892.0, CM084269_1_15828545.0, CM084265_1_59221309.1, CM084265_1_1229890.0, CM084276_1_6688311.1, CM084266_1_58087045.1, CM084266_1_69315458.0, CM084270_1_47076316.0, CM084274_1_4862958.0, CM084265_1_64969584.1",30,"adapter_trim.F1-B25-pH8.bam",-0.33,"adapter_trim.F1-B11-pH8.bam",-0.2,0.53 +"240","adapter_trim.F2-J227-pH7.bam","CM084277_1_18535852.1, CM084278_1_20732803.0, CM084267_1_6421632.1, CM084264_1_74800241.1, CM084266_1_68642404.1, CM084272_1_25266666.1, CM084269_1_41819713.0, CM084277_1_31296163.0, CM084267_1_5165677.1, CM084268_1_1326636.1, CM084270_1_39395913.1, CM084276_1_2874158.1, CM084267_1_52112064.0, CM084272_1_33453681.0, CM084272_1_33578227.0, CM084264_1_26773650.0, CM084274_1_4869924.0, CM084276_1_1510330.0, CM084266_1_65576934.1, CM084271_1_43851333.1, CM084272_1_33453892.0, CM084269_1_15828545.0, CM084265_1_59221309.1, CM084265_1_1229890.0, CM084276_1_6688311.1, CM084266_1_58087045.1, CM084266_1_69315458.0, CM084270_1_47076316.0, CM084274_1_4862958.0, CM084265_1_64969584.1",30,"adapter_trim.F1-B8-pH8.bam",0.04,"adapter_trim.F1-B11-pH8.bam",-0.13,0.17 +"241","adapter_trim.F2-B25-pH7.bam","CM084277_1_18535852.1, CM084278_1_20732803.0, CM084267_1_6421632.1, CM084264_1_74800241.1, CM084266_1_68642404.1, CM084272_1_25266666.1, CM084269_1_41819713.0, CM084277_1_31296163.0, CM084267_1_5165677.1, CM084268_1_1326636.1, CM084270_1_39395913.1, CM084276_1_2874158.1, CM084267_1_52112064.0, CM084272_1_33453681.0, CM084272_1_33578227.0, CM084264_1_26773650.0, CM084274_1_4869924.0, CM084276_1_1510330.0, CM084266_1_65576934.1, CM084271_1_43851333.1, CM084272_1_33453892.0, CM084269_1_15828545.0, CM084265_1_59221309.1, CM084265_1_1229890.0, CM084276_1_6688311.1, CM084266_1_58087045.1, CM084266_1_69315458.0, CM084270_1_47076316.0, CM084274_1_4862958.0, CM084265_1_64969584.1",30,"adapter_trim.F1-B25-pH8.bam",-0.13,"adapter_trim.F1-B8-pH8.bam",-0.08,0.21 +"242","adapter_trim.F2-J202-pH7.bam","CM084274_1_4694254.1, CM084276_1_1856643.1, CM084264_1_34294652.1, CM084264_1_69748575.1, CM084278_1_23542548.0, CM084272_1_18194019.1, CM084274_1_4793084.1, CM084269_1_45280043.0, CM084278_1_16767343.1, CM084274_1_34977131.0, CM084267_1_11257252.1, CM084269_1_39737147.0, CM084269_1_43525189.0, CM084264_1_70174663.0, CM084278_1_22660266.1, CM084274_1_5046215.1, CM084272_1_43469474.0, CM084272_1_33515314.0, CM084271_1_257113.0, CM084276_1_1852865.0, CM084275_1_120888.0, CM084278_1_17460152.0, CM084276_1_2841296.0, CM084271_1_340894.1, CM084274_1_4694263.1, CM084264_1_73886234.1, CM084278_1_281214.1, CM084278_1_28652016.1, CM084268_1_45628.1, CM084275_1_66842.0",30,"adapter_trim.F1-B20-pH8.bam",0.03,"adapter_trim.F1-B1-pH8.bam",-0.1,0.13 +"243","adapter_trim.F2-J189-pH7.bam","CM084266_1_71166448.1, CM084269_1_15828546.0, CM084277_1_28144351.1, CM084274_1_34977132.0, CM084277_1_4875961.1, CM084264_1_34301201.1, CM084269_1_15823100.0, CM084275_1_1304704.1, CM084264_1_69870962.0, CM084266_1_69141161.1, CM084270_1_19461856.1, CM084278_1_23541042.0, CM084269_1_12905592.0, CM084272_1_1894347.0, CM084266_1_57884345.1, CM084264_1_69712159.1, CM084276_1_6688311.0, CM084268_1_50216526.0, CM084265_1_24901907.1, CM084265_1_64585926.0, CM084272_1_18553651.1, CM084270_1_42355544.1, CM084268_1_298790.1, CM084265_1_65232929.0, CM084271_1_44086139.0, CM084269_1_43524691.0, CM084277_1_31222635.0, CM084270_1_26884058.1, CM084265_1_24901859.0, CM084275_1_35720341.0",30,"adapter_trim.F1-B20-pH8.bam",0.09,"adapter_trim.F1-B4-pH8.bam",0.02,0.11 +"244","adapter_trim.F2-J204-pH7.bam","CM084266_1_71166448.1, CM084269_1_15828546.0, CM084277_1_28144351.1, CM084274_1_34977132.0, CM084277_1_4875961.1, CM084264_1_34301201.1, CM084269_1_15823100.0, CM084275_1_1304704.1, CM084264_1_69870962.0, CM084266_1_69141161.1, CM084270_1_19461856.1, CM084278_1_23541042.0, CM084269_1_12905592.0, CM084272_1_1894347.0, CM084266_1_57884345.1, CM084264_1_69712159.1, CM084276_1_6688311.0, CM084268_1_50216526.0, CM084265_1_24901907.1, CM084265_1_64585926.0, CM084272_1_18553651.1, CM084270_1_42355544.1, CM084268_1_298790.1, CM084265_1_65232929.0, CM084271_1_44086139.0, CM084269_1_43524691.0, CM084277_1_31222635.0, CM084270_1_26884058.1, CM084265_1_24901859.0, CM084275_1_35720341.0",30,"adapter_trim.F1-B25-pH8.bam",-0.1,"adapter_trim.F1-B3-pH8.bam",-0.16,0.26 +"245","adapter_trim.F2-J221-pH7.bam","CM084266_1_71166448.1, CM084269_1_15828546.0, CM084277_1_28144351.1, CM084274_1_34977132.0, CM084277_1_4875961.1, CM084264_1_34301201.1, CM084269_1_15823100.0, CM084275_1_1304704.1, CM084264_1_69870962.0, CM084266_1_69141161.1, CM084270_1_19461856.1, CM084278_1_23541042.0, CM084269_1_12905592.0, CM084272_1_1894347.0, CM084266_1_57884345.1, CM084264_1_69712159.1, CM084276_1_6688311.0, CM084268_1_50216526.0, CM084265_1_24901907.1, CM084265_1_64585926.0, CM084272_1_18553651.1, CM084270_1_42355544.1, CM084268_1_298790.1, CM084265_1_65232929.0, CM084271_1_44086139.0, CM084269_1_43524691.0, CM084277_1_31222635.0, CM084270_1_26884058.1, CM084265_1_24901859.0, CM084275_1_35720341.0",30,"adapter_trim.F1-B8-pH8.bam",0.04,"adapter_trim.F1-B5-pH8.bam",-0.45,0.49 +"246","adapter_trim.F2-J223-pH7.bam","CM084266_1_71166448.1, CM084269_1_15828546.0, CM084277_1_28144351.1, CM084274_1_34977132.0, CM084277_1_4875961.1, CM084264_1_34301201.1, CM084269_1_15823100.0, CM084275_1_1304704.1, CM084264_1_69870962.0, CM084266_1_69141161.1, CM084270_1_19461856.1, CM084278_1_23541042.0, CM084269_1_12905592.0, CM084272_1_1894347.0, CM084266_1_57884345.1, CM084264_1_69712159.1, CM084276_1_6688311.0, CM084268_1_50216526.0, CM084265_1_24901907.1, CM084265_1_64585926.0, CM084272_1_18553651.1, CM084270_1_42355544.1, CM084268_1_298790.1, CM084265_1_65232929.0, CM084271_1_44086139.0, CM084269_1_43524691.0, CM084277_1_31222635.0, CM084270_1_26884058.1, CM084265_1_24901859.0, CM084275_1_35720341.0",30,"adapter_trim.F1-B20-pH8.bam",-0.26,"adapter_trim.F1-B5-pH8.bam",-0.37,0.63 +"247","adapter_trim.F2-B15-pH7.bam","CM084266_1_71166448.1, CM084269_1_15828546.0, CM084277_1_28144351.1, CM084274_1_34977132.0, CM084277_1_4875961.1, CM084264_1_34301201.1, CM084269_1_15823100.0, CM084275_1_1304704.1, CM084264_1_69870962.0, CM084266_1_69141161.1, CM084270_1_19461856.1, CM084278_1_23541042.0, CM084269_1_12905592.0, CM084272_1_1894347.0, CM084266_1_57884345.1, CM084264_1_69712159.1, CM084276_1_6688311.0, CM084268_1_50216526.0, CM084265_1_24901907.1, CM084265_1_64585926.0, CM084272_1_18553651.1, CM084270_1_42355544.1, CM084268_1_298790.1, CM084265_1_65232929.0, CM084271_1_44086139.0, CM084269_1_43524691.0, CM084277_1_31222635.0, CM084270_1_26884058.1, CM084265_1_24901859.0, CM084275_1_35720341.0",30,"adapter_trim.F1-B25-pH8.bam",0.01,"adapter_trim.F1-B1-pH8.bam",-0.31,0.32 +"248","adapter_trim.F2-J221-pH7.bam","CM084274_1_5120623.1, CM084265_1_65204740.0, CM084268_1_28845522.0, CM084274_1_4778747.0, CM084268_1_1326643.1, CM084269_1_12905562.1, CM084266_1_71149027.1, CM084264_1_71721959.0, CM084267_1_2163704.1, CM084267_1_52112064.1, CM084265_1_14403550.1, CM084267_1_5168533.1, CM084267_1_5830233.1, CM084279_1_33759516.0, CM084274_1_3691747.1, CM084268_1_3699577.0, CM084265_1_58484259.1, CM084279_1_33014997.0, CM084274_1_4708748.1, CM084274_1_4795052.1, CM084279_1_31409239.0, CM084268_1_50693597.0, CM084274_1_34977123.1, CM084277_1_30953064.1, CM084264_1_66525874.0, CM084275_1_660866.0, CM084266_1_68960355.0, CM084264_1_61167161.1, CM084271_1_340905.0, CM084269_1_43524168.1",30,"adapter_trim.F1-B8-pH8.bam",-0.26,"adapter_trim.F1-B7-pH8.bam",-0.26,0.52 +"249","adapter_trim.F2-J223-pH7.bam","CM084274_1_5120623.1, CM084265_1_65204740.0, CM084268_1_28845522.0, CM084274_1_4778747.0, CM084268_1_1326643.1, CM084269_1_12905562.1, CM084266_1_71149027.1, CM084264_1_71721959.0, CM084267_1_2163704.1, CM084267_1_52112064.1, CM084265_1_14403550.1, CM084267_1_5168533.1, CM084267_1_5830233.1, CM084279_1_33759516.0, CM084274_1_3691747.1, CM084268_1_3699577.0, CM084265_1_58484259.1, CM084279_1_33014997.0, CM084274_1_4708748.1, CM084274_1_4795052.1, CM084279_1_31409239.0, CM084268_1_50693597.0, CM084274_1_34977123.1, CM084277_1_30953064.1, CM084264_1_66525874.0, CM084275_1_660866.0, CM084266_1_68960355.0, CM084264_1_61167161.1, CM084271_1_340905.0, CM084269_1_43524168.1",30,"adapter_trim.F1-B15-pH8.bam",-0.1,"adapter_trim.F1-B3-pH8.bam",-0.25,0.35 +"250","adapter_trim.F2-J225-pH7.bam","CM084274_1_5120623.1, CM084265_1_65204740.0, CM084268_1_28845522.0, CM084274_1_4778747.0, CM084268_1_1326643.1, CM084269_1_12905562.1, CM084266_1_71149027.1, CM084264_1_71721959.0, CM084267_1_2163704.1, CM084267_1_52112064.1, CM084265_1_14403550.1, CM084267_1_5168533.1, CM084267_1_5830233.1, CM084279_1_33759516.0, CM084274_1_3691747.1, CM084268_1_3699577.0, CM084265_1_58484259.1, CM084279_1_33014997.0, CM084274_1_4708748.1, CM084274_1_4795052.1, CM084279_1_31409239.0, CM084268_1_50693597.0, CM084274_1_34977123.1, CM084277_1_30953064.1, CM084264_1_66525874.0, CM084275_1_660866.0, CM084266_1_68960355.0, CM084264_1_61167161.1, CM084271_1_340905.0, CM084269_1_43524168.1",30,"adapter_trim.F1-B21-pH8.bam",-0.36,"adapter_trim.F1-B11-pH8.bam",-0.31,0.67 +"251","adapter_trim.F2-J202-pH7.bam","CM084274_1_4869897.1, CM084264_1_69875456.1, CM084276_1_38558590.0, CM084265_1_64735183.0, CM084269_1_1577700.0, CM084264_1_72075461.0, CM084268_1_3699708.1, CM084264_1_34293018.0, CM084264_1_61227529.0, CM084278_1_20625578.1, CM084268_1_24031246.0, CM084275_1_66811.0, CM084276_1_38864870.1, CM084278_1_22657588.0, CM084270_1_4921089.0, CM084265_1_8362505.1, CM084268_1_28855770.0, CM084279_1_32644251.0, CM084278_1_31960662.1, CM084274_1_4727166.0, CM084264_1_70188206.1, CM084271_1_37244915.0, CM084275_1_2509958.1, CM084269_1_1526868.1, CM084266_1_65580309.0, CM084264_1_72011634.0, CM084274_1_4863175.0, CM084268_1_276380.0, CM084268_1_24031433.1, CM084269_1_15809932.1",30,"adapter_trim.F1-B21-pH8.bam",-0.14,"adapter_trim.F1-B3-pH8.bam",-0.28,0.42 +"252","adapter_trim.F2-J227-pH7.bam","CM084274_1_4869897.1, CM084264_1_69875456.1, CM084276_1_38558590.0, CM084265_1_64735183.0, CM084269_1_1577700.0, CM084264_1_72075461.0, CM084268_1_3699708.1, CM084264_1_34293018.0, CM084264_1_61227529.0, CM084278_1_20625578.1, CM084268_1_24031246.0, CM084275_1_66811.0, CM084276_1_38864870.1, CM084278_1_22657588.0, CM084270_1_4921089.0, CM084265_1_8362505.1, CM084268_1_28855770.0, CM084279_1_32644251.0, CM084278_1_31960662.1, CM084274_1_4727166.0, CM084264_1_70188206.1, CM084271_1_37244915.0, CM084275_1_2509958.1, CM084269_1_1526868.1, CM084266_1_65580309.0, CM084264_1_72011634.0, CM084274_1_4863175.0, CM084268_1_276380.0, CM084268_1_24031433.1, CM084269_1_15809932.1",30,"adapter_trim.F1-B21-pH8.bam",0.22,"adapter_trim.F1-B7-pH8.bam",-0.7,0.92 +"253","adapter_trim.F2-J221-pH7.bam","CM084274_1_4734019.1, CM084266_1_66483893.0, CM084275_1_400262.1, CM084274_1_4727166.0, CM084271_1_10301903.0, CM084268_1_28845816.0, CM084271_1_43860460.1, CM084271_1_44134413.1, CM084267_1_50993881.0, CM084268_1_82245.0, CM084266_1_67239897.0, CM084266_1_69095441.1, CM084269_1_45280043.0, CM084271_1_43851333.1, CM084271_1_26332979.1, CM084273_1_32698908.0, CM084266_1_38532344.1, CM084266_1_69806294.0, CM084278_1_22660266.1, CM084264_1_70471433.0, CM084270_1_4921103.0, CM084272_1_18194995.0, CM084269_1_42862704.0, CM084268_1_28845446.0, CM084278_1_15228688.1, CM084269_1_46733079.0, CM084275_1_39774878.0, CM084273_1_11267029.0, CM084269_1_43525440.0, CM084267_1_48167385.0",30,"adapter_trim.F1-B25-pH8.bam",-0.43,"adapter_trim.F1-B11-pH8.bam",-0.18,0.61 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CM084269_1_1567462.0, CM084268_1_50323846.0, CM084269_1_15812959.0, CM084266_1_62460058.0, CM084269_1_4628634.1, CM084266_1_58087794.0, CM084264_1_48147317.0, CM084278_1_22654265.0, CM084264_1_26773690.1, CM084274_1_4720394.1, CM084271_1_44075852.0, CM084264_1_73308596.1, CM084270_1_4920918.0, CM084279_1_31065250.1, CM084268_1_3702289.1, CM084268_1_22932623.1, CM084267_1_6420828.1, CM084265_1_72071409.0, CM084276_1_38558590.0, CM084275_1_39776618.1, CM084269_1_43528587.0, CM084274_1_4694855.1, CM084269_1_15827759.0",30,"adapter_trim.F1-B15-pH8.bam",-0.28,"adapter_trim.F1-B9-pH8.bam",-0.11,0.39 +"256","adapter_trim.F2-J184-pH7.bam","CM084275_1_38995260.0, CM084269_1_15809964.1, CM084266_1_69141121.0, CM084267_1_30270830.0, CM084264_1_66522465.1, CM084264_1_69271980.0, CM084273_1_31863355.0, CM084265_1_64784798.0, CM084269_1_1563962.0, CM084275_1_36059374.1, CM084274_1_4686943.0, CM084274_1_4796888.1, CM084279_1_1063045.0, CM084265_1_71796271.0, CM084267_1_6421632.1, CM084265_1_71463753.1, CM084279_1_10153273.1, CM084274_1_4867333.0, CM084264_1_73931084.1, CM084275_1_1303251.0, CM084275_1_39338236.0, CM084276_1_38558559.1, CM084276_1_20157067.1, CM084270_1_42355508.1, CM084265_1_72992173.0, CM084265_1_794877.0, CM084279_1_10156977.1, CM084267_1_700114.1, CM084267_1_52593775.1, CM084279_1_10149547.1",30,"adapter_trim.F1-B25-pH8.bam",-0.07,"adapter_trim.F1-B8-pH8.bam",-0.66,0.73 +"257","adapter_trim.F2-J204-pH7.bam","CM084275_1_38995260.0, CM084269_1_15809964.1, CM084266_1_69141121.0, CM084267_1_30270830.0, CM084264_1_66522465.1, CM084264_1_69271980.0, CM084273_1_31863355.0, CM084265_1_64784798.0, CM084269_1_1563962.0, CM084275_1_36059374.1, CM084274_1_4686943.0, CM084274_1_4796888.1, CM084279_1_1063045.0, CM084265_1_71796271.0, CM084267_1_6421632.1, CM084265_1_71463753.1, CM084279_1_10153273.1, CM084274_1_4867333.0, CM084264_1_73931084.1, CM084275_1_1303251.0, CM084275_1_39338236.0, CM084276_1_38558559.1, CM084276_1_20157067.1, CM084270_1_42355508.1, CM084265_1_72992173.0, CM084265_1_794877.0, CM084279_1_10156977.1, CM084267_1_700114.1, CM084267_1_52593775.1, CM084279_1_10149547.1",30,"adapter_trim.F1-B8-pH8.bam",-0.21,"adapter_trim.F1-B4-pH8.bam",0,0.21 +"258","adapter_trim.F2-J221-pH7.bam","CM084275_1_38995260.0, CM084269_1_15809964.1, CM084266_1_69141121.0, CM084267_1_30270830.0, CM084264_1_66522465.1, CM084264_1_69271980.0, CM084273_1_31863355.0, CM084265_1_64784798.0, CM084269_1_1563962.0, CM084275_1_36059374.1, CM084274_1_4686943.0, CM084274_1_4796888.1, CM084279_1_1063045.0, CM084265_1_71796271.0, CM084267_1_6421632.1, CM084265_1_71463753.1, CM084279_1_10153273.1, CM084274_1_4867333.0, CM084264_1_73931084.1, CM084275_1_1303251.0, CM084275_1_39338236.0, CM084276_1_38558559.1, CM084276_1_20157067.1, CM084270_1_42355508.1, CM084265_1_72992173.0, CM084265_1_794877.0, CM084279_1_10156977.1, CM084267_1_700114.1, CM084267_1_52593775.1, CM084279_1_10149547.1",30,"adapter_trim.F1-B8-pH8.bam",-0.24,"adapter_trim.F1-B1-pH8.bam",-0.01,0.25 +"259","adapter_trim.F2-J223-pH7.bam","CM084275_1_38995260.0, CM084269_1_15809964.1, CM084266_1_69141121.0, CM084267_1_30270830.0, CM084264_1_66522465.1, CM084264_1_69271980.0, CM084273_1_31863355.0, CM084265_1_64784798.0, CM084269_1_1563962.0, CM084275_1_36059374.1, CM084274_1_4686943.0, CM084274_1_4796888.1, CM084279_1_1063045.0, CM084265_1_71796271.0, CM084267_1_6421632.1, CM084265_1_71463753.1, CM084279_1_10153273.1, CM084274_1_4867333.0, CM084264_1_73931084.1, CM084275_1_1303251.0, CM084275_1_39338236.0, CM084276_1_38558559.1, CM084276_1_20157067.1, CM084270_1_42355508.1, CM084265_1_72992173.0, CM084265_1_794877.0, CM084279_1_10156977.1, CM084267_1_700114.1, CM084267_1_52593775.1, CM084279_1_10149547.1",30,"adapter_trim.F1-B20-pH8.bam",-0.22,"adapter_trim.F1-B4-pH8.bam",-0.32,0.54 +"260","adapter_trim.F2-B19-pH7.bam","CM084275_1_38995260.0, CM084269_1_15809964.1, CM084266_1_69141121.0, CM084267_1_30270830.0, CM084264_1_66522465.1, CM084264_1_69271980.0, CM084273_1_31863355.0, CM084265_1_64784798.0, CM084269_1_1563962.0, CM084275_1_36059374.1, CM084274_1_4686943.0, CM084274_1_4796888.1, CM084279_1_1063045.0, CM084265_1_71796271.0, CM084267_1_6421632.1, CM084265_1_71463753.1, CM084279_1_10153273.1, CM084274_1_4867333.0, CM084264_1_73931084.1, CM084275_1_1303251.0, CM084275_1_39338236.0, CM084276_1_38558559.1, CM084276_1_20157067.1, CM084270_1_42355508.1, CM084265_1_72992173.0, CM084265_1_794877.0, CM084279_1_10156977.1, CM084267_1_700114.1, CM084267_1_52593775.1, CM084279_1_10149547.1",30,"adapter_trim.F1-B8-pH8.bam",-0.24,"adapter_trim.F1-B1-pH8.bam",-0.12,0.36 +"261","adapter_trim.F2-B5-pH7.bam","CM084275_1_38995260.0, CM084269_1_15809964.1, CM084266_1_69141121.0, CM084267_1_30270830.0, CM084264_1_66522465.1, CM084264_1_69271980.0, CM084273_1_31863355.0, CM084265_1_64784798.0, CM084269_1_1563962.0, CM084275_1_36059374.1, CM084274_1_4686943.0, CM084274_1_4796888.1, CM084279_1_1063045.0, CM084265_1_71796271.0, CM084267_1_6421632.1, CM084265_1_71463753.1, CM084279_1_10153273.1, CM084274_1_4867333.0, CM084264_1_73931084.1, CM084275_1_1303251.0, CM084275_1_39338236.0, CM084276_1_38558559.1, CM084276_1_20157067.1, CM084270_1_42355508.1, CM084265_1_72992173.0, CM084265_1_794877.0, CM084279_1_10156977.1, CM084267_1_700114.1, CM084267_1_52593775.1, CM084279_1_10149547.1",30,"adapter_trim.F1-B21-pH8.bam",-0.39,"adapter_trim.F1-B1-pH8.bam",-0.1,0.49 +"262","adapter_trim.F2-J206-pH7.bam","CM084279_1_10159270.1, CM084268_1_18519471.0, CM084269_1_39736980.0, CM084272_1_36474231.1, CM084268_1_2713890.1, CM084276_1_1856094.0, CM084264_1_73152605.1, CM084264_1_70390974.1, CM084277_1_5804570.0, CM084278_1_23541026.1, CM084264_1_70188206.1, CM084266_1_69315458.1, CM084272_1_7002402.1, CM084272_1_44059306.0, CM084276_1_38558603.1, CM084265_1_68072879.1, CM084271_1_276716.0, CM084276_1_38960928.0, CM084270_1_47077463.0, CM084266_1_23321806.1, CM084274_1_4694558.0, CM084266_1_69315458.0, CM084268_1_2832731.0, CM084265_1_959807.1, CM084267_1_727876.0, CM084272_1_1883067.1, CM084266_1_66383710.1, CM084264_1_69539449.1, CM084274_1_4793084.1, CM084274_1_11694583.1",30,"adapter_trim.F1-B25-pH8.bam",0.01,"adapter_trim.F1-B10-pH8.bam",-0.03,0.04 +"263","adapter_trim.F2-J187-pH7.bam","CM084266_1_808035.0, CM084275_1_667604.0, CM084269_1_1567396.0, CM084272_1_18574380.0, CM084278_1_8558559.1, CM084268_1_3703420.1, CM084269_1_36339693.0, CM084272_1_1891465.1, CM084268_1_938570.1, CM084268_1_50323442.1, CM084276_1_20157233.1, CM084267_1_52591726.1, CM084270_1_12307506.1, CM084266_1_63468234.1, CM084276_1_1510348.0, CM084269_1_1580179.1, CM084275_1_38169337.0, CM084269_1_1558041.0, CM084271_1_1052214.0, CM084264_1_73604686.1, CM084278_1_16767353.0, CM084274_1_4769088.0, CM084264_1_69862115.0, CM084266_1_58093839.0, CM084278_1_22665572.1, CM084269_1_45238132.1, CM084269_1_43524375.0, CM084271_1_37237146.1, CM084269_1_15798323.0, CM084270_1_35204451.0",30,"adapter_trim.F1-B25-pH8.bam",-0.11,"adapter_trim.F1-B11-pH8.bam",0.06,0.17 +"264","adapter_trim.F2-J202-pH7.bam","CM084266_1_808035.0, CM084275_1_667604.0, CM084269_1_1567396.0, CM084272_1_18574380.0, CM084278_1_8558559.1, CM084268_1_3703420.1, CM084269_1_36339693.0, CM084272_1_1891465.1, CM084268_1_938570.1, CM084268_1_50323442.1, CM084276_1_20157233.1, CM084267_1_52591726.1, CM084270_1_12307506.1, CM084266_1_63468234.1, CM084276_1_1510348.0, CM084269_1_1580179.1, CM084275_1_38169337.0, CM084269_1_1558041.0, CM084271_1_1052214.0, CM084264_1_73604686.1, CM084278_1_16767353.0, CM084274_1_4769088.0, CM084264_1_69862115.0, CM084266_1_58093839.0, CM084278_1_22665572.1, CM084269_1_45238132.1, CM084269_1_43524375.0, CM084271_1_37237146.1, CM084269_1_15798323.0, CM084270_1_35204451.0",30,"adapter_trim.F1-B20-pH8.bam",-0.17,"adapter_trim.F1-B1-pH8.bam",0.04,0.21 +"265","adapter_trim.F2-B25-pH7.bam","CM084265_1_71265328.0, CM084270_1_46587592.1, CM084268_1_47694452.1, CM084265_1_64969585.1, CM084272_1_1894332.1, CM084264_1_34301201.1, CM084272_1_33597669.0, CM084266_1_68643450.1, CM084266_1_64726584.1, CM084266_1_71166412.1, CM084271_1_43812187.0, CM084266_1_46766307.0, CM084266_1_69806306.0, CM084279_1_1512885.1, CM084279_1_1070313.1, CM084272_1_18188624.0, CM084270_1_4920968.0, CM084265_1_72178237.1, CM084276_1_38072639.1, CM084269_1_47265506.0, CM084267_1_5161036.1, CM084265_1_68807625.0, CM084272_1_18188624.1, CM084267_1_699277.1, CM084275_1_35722060.1, CM084278_1_20734519.0, CM084265_1_72990731.0, CM084265_1_66143640.1, CM084274_1_4795858.1, CM084264_1_64487845.0",30,"adapter_trim.F1-B25-pH8.bam",-0.25,"adapter_trim.F1-B5-pH8.bam",-0.31,0.56 +"266","adapter_trim.F2-J204-pH7.bam","CM084268_1_1326643.0, CM084266_1_70940178.0, CM084277_1_1868384.0, CM084265_1_72992174.0, CM084265_1_72986756.1, CM084276_1_59031.1, CM084275_1_29098655.0, CM084268_1_24031315.1, CM084269_1_15823188.1, CM084274_1_4795052.1, CM084270_1_47077479.1, CM084268_1_938570.0, CM084267_1_591197.0, CM084267_1_50392699.0, CM084274_1_4694915.1, CM084264_1_73311139.0, CM084264_1_69863993.0, CM084274_1_4792130.0, CM084271_1_26325720.0, CM084276_1_12383618.0, CM084273_1_42287238.1, CM084268_1_50679551.1, CM084268_1_50200472.1, CM084270_1_1559802.0, CM084264_1_70191778.1, CM084274_1_4864709.0, CM084274_1_4788621.1, CM084266_1_70221170.0, CM084274_1_41688611.0, CM084272_1_7002400.0",30,"adapter_trim.F1-B25-pH8.bam",-0.01,"adapter_trim.F1-B4-pH8.bam",0.34,0.35 +"267","adapter_trim.F2-J225-pH7.bam","CM084268_1_1326643.0, CM084266_1_70940178.0, CM084277_1_1868384.0, CM084265_1_72992174.0, CM084265_1_72986756.1, CM084276_1_59031.1, CM084275_1_29098655.0, CM084268_1_24031315.1, CM084269_1_15823188.1, CM084274_1_4795052.1, CM084270_1_47077479.1, CM084268_1_938570.0, CM084267_1_591197.0, CM084267_1_50392699.0, CM084274_1_4694915.1, CM084264_1_73311139.0, CM084264_1_69863993.0, CM084274_1_4792130.0, CM084271_1_26325720.0, CM084276_1_12383618.0, CM084273_1_42287238.1, CM084268_1_50679551.1, CM084268_1_50200472.1, CM084270_1_1559802.0, CM084264_1_70191778.1, CM084274_1_4864709.0, CM084274_1_4788621.1, CM084266_1_70221170.0, CM084274_1_41688611.0, CM084272_1_7002400.0",30,"adapter_trim.F1-B20-pH8.bam",-0.21,"adapter_trim.F1-B1-pH8.bam",-0.65,0.86 +"268","adapter_trim.F2-B10-pH7.bam","CM084268_1_1326643.0, CM084266_1_70940178.0, CM084277_1_1868384.0, CM084265_1_72992174.0, CM084265_1_72986756.1, CM084276_1_59031.1, CM084275_1_29098655.0, CM084268_1_24031315.1, CM084269_1_15823188.1, CM084274_1_4795052.1, CM084270_1_47077479.1, CM084268_1_938570.0, CM084267_1_591197.0, CM084267_1_50392699.0, CM084274_1_4694915.1, CM084264_1_73311139.0, CM084264_1_69863993.0, CM084274_1_4792130.0, CM084271_1_26325720.0, CM084276_1_12383618.0, CM084273_1_42287238.1, CM084268_1_50679551.1, CM084268_1_50200472.1, CM084270_1_1559802.0, CM084264_1_70191778.1, CM084274_1_4864709.0, CM084274_1_4788621.1, CM084266_1_70221170.0, CM084274_1_41688611.0, CM084272_1_7002400.0",30,"adapter_trim.F1-B8-pH8.bam",-0.49,"adapter_trim.F1-B1-pH8.bam",-0.58,1.07 +"269","adapter_trim.F2-B10-pH7.bam","CM084273_1_7839210.1, CM084268_1_1326648.0, CM084270_1_10496921.0, CM084274_1_4694967.1, CM084278_1_22667320.1, CM084266_1_1230901.0, CM084271_1_43868181.0, CM084264_1_26777912.0, CM084269_1_39737147.0, CM084275_1_25393416.1, CM084275_1_4345708.0, CM084279_1_10156977.0, CM084276_1_38072639.0, CM084264_1_26773650.1, CM084271_1_26324168.0, CM084269_1_43523945.0, CM084279_1_23112955.0, CM084266_1_58086157.0, CM084268_1_298828.0, CM084268_1_24031246.0, CM084270_1_19464668.1, CM084275_1_667604.1, CM084267_1_2652518.1, CM084266_1_23317745.1, CM084264_1_73604722.1, CM084264_1_61167189.0, CM084264_1_15073840.0, CM084264_1_34292374.0, CM084270_1_42348997.1, CM084273_1_11267029.0",30,"adapter_trim.F1-B25-pH8.bam",-0.04,"adapter_trim.F1-B4-pH8.bam",-0.4,0.44 +"270","adapter_trim.F2-B25-pH7.bam","CM084273_1_7839210.1, CM084268_1_1326648.0, CM084270_1_10496921.0, CM084274_1_4694967.1, CM084278_1_22667320.1, CM084266_1_1230901.0, CM084271_1_43868181.0, CM084264_1_26777912.0, CM084269_1_39737147.0, CM084275_1_25393416.1, CM084275_1_4345708.0, CM084279_1_10156977.0, CM084276_1_38072639.0, CM084264_1_26773650.1, CM084271_1_26324168.0, CM084269_1_43523945.0, CM084279_1_23112955.0, CM084266_1_58086157.0, CM084268_1_298828.0, CM084268_1_24031246.0, CM084270_1_19464668.1, CM084275_1_667604.1, CM084267_1_2652518.1, CM084266_1_23317745.1, CM084264_1_73604722.1, CM084264_1_61167189.0, CM084264_1_15073840.0, CM084264_1_34292374.0, CM084270_1_42348997.1, CM084273_1_11267029.0",30,"adapter_trim.F1-B25-pH8.bam",0.13,"adapter_trim.F1-B4-pH8.bam",-0.21,0.34 +"271","adapter_trim.F2-J185-pH7.bam","CM084279_1_649298.0, CM084278_1_20600197.1, CM084279_1_1070322.1, CM084270_1_9413173.1, CM084265_1_72368299.0, CM084275_1_66811.1, CM084274_1_4708749.0, CM084277_1_18545080.1, CM084264_1_74076720.0, CM084266_1_57882606.0, CM084267_1_11257244.0, CM084276_1_38450614.0, CM084268_1_3692649.1, CM084273_1_31865230.0, CM084279_1_10156951.1, CM084270_1_12307511.0, CM084265_1_68869208.1, CM084271_1_26332979.0, CM084272_1_33571767.1, CM084266_1_23294618.0, CM084264_1_34294472.0, CM084264_1_34301630.0, CM084279_1_31409261.0, CM084265_1_72990731.1, CM084273_1_42285571.1, CM084271_1_26324154.1, CM084276_1_6150174.1, CM084274_1_4734039.0, CM084265_1_72637027.0, CM084274_1_4793177.0",30,"adapter_trim.F1-B20-pH8.bam",-0.07,"adapter_trim.F1-B8-pH8.bam",-0.05,0.12 +"272","adapter_trim.F2-J165-pH7.bam","CM084275_1_36064332.0, CM084274_1_4066885.0, CM084277_1_30953033.1, CM084268_1_28845789.0, CM084276_1_771556.1, CM084274_1_4726638.1, CM084265_1_72078910.0, CM084269_1_41809360.1, CM084268_1_28845816.0, CM084264_1_70456947.0, CM084274_1_4788638.1, CM084278_1_22657612.0, CM084270_1_39395973.1, CM084266_1_68659869.1, CM084274_1_4769088.1, CM084278_1_31960704.1, CM084278_1_22664889.1, CM084278_1_24948349.1, CM084265_1_959800.1, CM084265_1_64586069.1, CM084275_1_672856.0, CM084270_1_8242296.1, CM084276_1_1856066.0, CM084267_1_50994187.0, CM084271_1_44069731.0, CM084267_1_2233926.0, CM084270_1_4921029.1, CM084269_1_12905566.0, CM084266_1_68919262.1, CM084265_1_24898691.1",30,"adapter_trim.F1-B15-pH8.bam",-0.32,"adapter_trim.F1-B4-pH8.bam",-0.34,0.66 +"273","adapter_trim.F2-B4-pH7.bam","CM084275_1_36064332.0, CM084274_1_4066885.0, CM084277_1_30953033.1, CM084268_1_28845789.0, CM084276_1_771556.1, CM084274_1_4726638.1, CM084265_1_72078910.0, CM084269_1_41809360.1, CM084268_1_28845816.0, CM084264_1_70456947.0, CM084274_1_4788638.1, CM084278_1_22657612.0, CM084270_1_39395973.1, CM084266_1_68659869.1, CM084274_1_4769088.1, CM084278_1_31960704.1, CM084278_1_22664889.1, CM084278_1_24948349.1, CM084265_1_959800.1, CM084265_1_64586069.1, CM084275_1_672856.0, CM084270_1_8242296.1, CM084276_1_1856066.0, CM084267_1_50994187.0, CM084271_1_44069731.0, CM084267_1_2233926.0, CM084270_1_4921029.1, CM084269_1_12905566.0, CM084266_1_68919262.1, CM084265_1_24898691.1",30,"adapter_trim.F1-B8-pH8.bam",-0.39,"adapter_trim.F1-B1-pH8.bam",-0.4,0.79 +"274","adapter_trim.F2-J165-pH7.bam","CM084278_1_20736228.0, CM084271_1_26325742.0, CM084276_1_20157233.0, CM084265_1_70974986.1, CM084266_1_57886490.1, CM084272_1_9070882.1, CM084272_1_33571767.0, CM084277_1_18545080.0, CM084265_1_54591404.1, CM084275_1_29098876.0, CM084274_1_4694967.0, CM084274_1_4788623.0, CM084275_1_327388.1, CM084265_1_14403550.0, CM084279_1_32640578.0, CM084277_1_30953078.1, CM084267_1_3204556.1, CM084269_1_15798360.0, CM084264_1_70175564.1, CM084269_1_43523784.0, CM084264_1_73604686.0, CM084265_1_60215543.1, CM084267_1_2163720.0, CM084271_1_7137729.0, CM084275_1_39776469.0, CM084272_1_11675308.0, CM084276_1_38287449.0, CM084267_1_51346515.1, CM084265_1_64586069.0, CM084277_1_18535877.0",30,"adapter_trim.F1-B25-pH8.bam",-0.29,"adapter_trim.F1-B7-pH8.bam",-0.27,0.56 +"275","adapter_trim.F2-B25-pH7.bam","CM084278_1_20736228.0, CM084271_1_26325742.0, CM084276_1_20157233.0, CM084265_1_70974986.1, CM084266_1_57886490.1, CM084272_1_9070882.1, CM084272_1_33571767.0, CM084277_1_18545080.0, CM084265_1_54591404.1, CM084275_1_29098876.0, CM084274_1_4694967.0, CM084274_1_4788623.0, CM084275_1_327388.1, CM084265_1_14403550.0, CM084279_1_32640578.0, CM084277_1_30953078.1, CM084267_1_3204556.1, CM084269_1_15798360.0, CM084264_1_70175564.1, CM084269_1_43523784.0, CM084264_1_73604686.0, CM084265_1_60215543.1, CM084267_1_2163720.0, CM084271_1_7137729.0, CM084275_1_39776469.0, CM084272_1_11675308.0, CM084276_1_38287449.0, CM084267_1_51346515.1, CM084265_1_64586069.0, CM084277_1_18535877.0",30,"adapter_trim.F1-B21-pH8.bam",0.03,"adapter_trim.F1-B11-pH8.bam",-0.58,0.61 +"276","adapter_trim.F2-B7-pH7.bam","CM084278_1_20736228.0, CM084271_1_26325742.0, CM084276_1_20157233.0, CM084265_1_70974986.1, CM084266_1_57886490.1, CM084272_1_9070882.1, CM084272_1_33571767.0, CM084277_1_18545080.0, CM084265_1_54591404.1, CM084275_1_29098876.0, CM084274_1_4694967.0, CM084274_1_4788623.0, CM084275_1_327388.1, CM084265_1_14403550.0, CM084279_1_32640578.0, CM084277_1_30953078.1, CM084267_1_3204556.1, CM084269_1_15798360.0, CM084264_1_70175564.1, CM084269_1_43523784.0, CM084264_1_73604686.0, CM084265_1_60215543.1, CM084267_1_2163720.0, CM084271_1_7137729.0, CM084275_1_39776469.0, CM084272_1_11675308.0, CM084276_1_38287449.0, CM084267_1_51346515.1, CM084265_1_64586069.0, CM084277_1_18535877.0",30,"adapter_trim.F1-B25-pH8.bam",-0.12,"adapter_trim.F1-B5-pH8.bam",-0.21,0.33 +"277","adapter_trim.F2-J186-pH7.bam","CM084264_1_72054043.1, CM084277_1_10628711.1, CM084275_1_327919.0, CM084265_1_70975032.1, CM084267_1_2908860.1, CM084267_1_8687423.0, CM084273_1_42252916.1, CM084268_1_45604.1, CM084268_1_3261991.0, CM084276_1_2857930.0, CM084273_1_31864421.1, CM084266_1_59802398.0, CM084265_1_71796317.1, CM084268_1_3691704.1, CM084279_1_1062144.0, CM084276_1_38797638.0, CM084268_1_45628.1, CM084269_1_1556257.1, CM084266_1_57888582.1, CM084272_1_1704343.0, CM084267_1_51000137.1, CM084267_1_13226543.1, CM084278_1_22654601.0, CM084278_1_20600197.1, CM084276_1_56075.0, CM084264_1_69902276.1, CM084269_1_45280054.1, CM084268_1_28851913.1, CM084271_1_44086160.0, CM084270_1_46588177.0",30,"adapter_trim.F1-B21-pH8.bam",-0.1,"adapter_trim.F1-B3-pH8.bam",0.05,0.15 +"278","adapter_trim.F2-J201-pH7.bam","CM084264_1_72054043.1, CM084277_1_10628711.1, CM084275_1_327919.0, CM084265_1_70975032.1, CM084267_1_2908860.1, CM084267_1_8687423.0, CM084273_1_42252916.1, CM084268_1_45604.1, CM084268_1_3261991.0, CM084276_1_2857930.0, CM084273_1_31864421.1, CM084266_1_59802398.0, CM084265_1_71796317.1, CM084268_1_3691704.1, CM084279_1_1062144.0, CM084276_1_38797638.0, CM084268_1_45628.1, CM084269_1_1556257.1, CM084266_1_57888582.1, CM084272_1_1704343.0, CM084267_1_51000137.1, CM084267_1_13226543.1, CM084278_1_22654601.0, CM084278_1_20600197.1, CM084276_1_56075.0, CM084264_1_69902276.1, CM084269_1_45280054.1, CM084268_1_28851913.1, CM084271_1_44086160.0, CM084270_1_46588177.0",30,"adapter_trim.F1-B15-pH8.bam",-0.36,"adapter_trim.F1-B4-pH8.bam",-0.03,0.39 +"279","adapter_trim.F2-J223-pH7.bam","CM084264_1_72054043.1, CM084277_1_10628711.1, CM084275_1_327919.0, CM084265_1_70975032.1, CM084267_1_2908860.1, CM084267_1_8687423.0, CM084273_1_42252916.1, CM084268_1_45604.1, CM084268_1_3261991.0, CM084276_1_2857930.0, CM084273_1_31864421.1, CM084266_1_59802398.0, CM084265_1_71796317.1, CM084268_1_3691704.1, CM084279_1_1062144.0, CM084276_1_38797638.0, CM084268_1_45628.1, CM084269_1_1556257.1, CM084266_1_57888582.1, CM084272_1_1704343.0, CM084267_1_51000137.1, CM084267_1_13226543.1, CM084278_1_22654601.0, CM084278_1_20600197.1, CM084276_1_56075.0, CM084264_1_69902276.1, CM084269_1_45280054.1, CM084268_1_28851913.1, CM084271_1_44086160.0, CM084270_1_46588177.0",30,"adapter_trim.F1-B8-pH8.bam",-0.3,"adapter_trim.F1-B11-pH8.bam",-0.17,0.47 +"280","adapter_trim.F2-B25-pH7.bam","CM084264_1_72054043.1, CM084277_1_10628711.1, CM084275_1_327919.0, CM084265_1_70975032.1, CM084267_1_2908860.1, CM084267_1_8687423.0, CM084273_1_42252916.1, CM084268_1_45604.1, CM084268_1_3261991.0, CM084276_1_2857930.0, CM084273_1_31864421.1, CM084266_1_59802398.0, CM084265_1_71796317.1, CM084268_1_3691704.1, CM084279_1_1062144.0, CM084276_1_38797638.0, CM084268_1_45628.1, CM084269_1_1556257.1, CM084266_1_57888582.1, CM084272_1_1704343.0, CM084267_1_51000137.1, CM084267_1_13226543.1, CM084278_1_22654601.0, CM084278_1_20600197.1, CM084276_1_56075.0, CM084264_1_69902276.1, CM084269_1_45280054.1, CM084268_1_28851913.1, CM084271_1_44086160.0, CM084270_1_46588177.0",30,"adapter_trim.F1-B25-pH8.bam",-0.11,"adapter_trim.F1-B7-pH8.bam",-0.49,0.6 +"281","adapter_trim.F2-B5-pH7.bam","CM084264_1_72054043.1, CM084277_1_10628711.1, CM084275_1_327919.0, CM084265_1_70975032.1, CM084267_1_2908860.1, CM084267_1_8687423.0, CM084273_1_42252916.1, CM084268_1_45604.1, CM084268_1_3261991.0, CM084276_1_2857930.0, CM084273_1_31864421.1, CM084266_1_59802398.0, CM084265_1_71796317.1, CM084268_1_3691704.1, CM084279_1_1062144.0, CM084276_1_38797638.0, CM084268_1_45628.1, CM084269_1_1556257.1, CM084266_1_57888582.1, CM084272_1_1704343.0, CM084267_1_51000137.1, CM084267_1_13226543.1, CM084278_1_22654601.0, CM084278_1_20600197.1, CM084276_1_56075.0, CM084264_1_69902276.1, CM084269_1_45280054.1, CM084268_1_28851913.1, CM084271_1_44086160.0, CM084270_1_46588177.0",30,"adapter_trim.F1-B15-pH8.bam",-0.45,"adapter_trim.F1-B11-pH8.bam",-0.48,0.93 +"282","adapter_trim.F2-J202-pH7.bam","CM084277_1_35287257.0, CM084264_1_34300493.0, CM084266_1_69623581.1, CM084279_1_992716.1, CM084267_1_13229666.0, CM084276_1_1856643.1, CM084269_1_1558041.0, CM084268_1_49735217.0, CM084264_1_71718010.0, CM084265_1_70607188.0, CM084265_1_68789108.0, CM084267_1_2908060.0, CM084265_1_54595186.1, CM084269_1_15813148.0, CM084264_1_2738116.0, CM084279_1_10150313.1, CM084270_1_46590816.0, CM084276_1_11709760.1, CM084272_1_1894332.0, CM084275_1_25395479.0, CM084271_1_1052214.0, CM084271_1_44086139.1, CM084274_1_4726638.1, CM084266_1_50301468.0, CM084266_1_68659869.0, CM084275_1_39776486.0, CM084272_1_33515314.1, CM084267_1_50994187.1, CM084265_1_24901859.1, CM084279_1_32640564.1",30,"adapter_trim.F1-B25-pH8.bam",-0.34,"adapter_trim.F1-B3-pH8.bam",-0.1,0.44 +"283","adapter_trim.F2-J223-pH7.bam","CM084277_1_35287257.0, CM084264_1_34300493.0, CM084266_1_69623581.1, CM084279_1_992716.1, CM084267_1_13229666.0, CM084276_1_1856643.1, CM084269_1_1558041.0, CM084268_1_49735217.0, CM084264_1_71718010.0, CM084265_1_70607188.0, CM084265_1_68789108.0, CM084267_1_2908060.0, CM084265_1_54595186.1, CM084269_1_15813148.0, CM084264_1_2738116.0, CM084279_1_10150313.1, CM084270_1_46590816.0, CM084276_1_11709760.1, CM084272_1_1894332.0, CM084275_1_25395479.0, CM084271_1_1052214.0, CM084271_1_44086139.1, CM084274_1_4726638.1, CM084266_1_50301468.0, CM084266_1_68659869.0, CM084275_1_39776486.0, CM084272_1_33515314.1, CM084267_1_50994187.1, CM084265_1_24901859.1, CM084279_1_32640564.1",30,"adapter_trim.F1-B15-pH8.bam",-0.1,"adapter_trim.F1-B8-pH8.bam",-0.42,0.52 +"284","adapter_trim.F2-J166-pH7.bam","CM084272_1_41037487.1, CM084272_1_1894332.0, CM084264_1_6151084.1, CM084269_1_43524068.1, CM084270_1_8242296.1, CM084270_1_39396029.1, CM084278_1_31960704.0, CM084271_1_44105575.1, CM084277_1_6198938.1, CM084269_1_15828548.0, CM084271_1_43816629.1, CM084272_1_33515302.0, CM084268_1_28845336.1, CM084268_1_49735243.1, CM084268_1_50216562.0, CM084266_1_68960407.1, CM084269_1_40338566.1, CM084270_1_4921031.0, CM084268_1_42008.0, CM084264_1_70173613.0, CM084267_1_2309126.0, CM084265_1_72926026.1, CM084270_1_47076332.0, CM084267_1_13226543.1, CM084269_1_45420483.1, CM084279_1_32644179.0, CM084271_1_346606.1, CM084266_1_69623578.0, CM084276_1_2874135.1, CM084274_1_4795858.0",30,"adapter_trim.F1-B20-pH8.bam",-0.11,"adapter_trim.F1-B5-pH8.bam",-0.41,0.52 +"285","adapter_trim.F2-J205-pH7.bam","CM084272_1_41037487.1, CM084272_1_1894332.0, CM084264_1_6151084.1, CM084269_1_43524068.1, CM084270_1_8242296.1, CM084270_1_39396029.1, CM084278_1_31960704.0, CM084271_1_44105575.1, CM084277_1_6198938.1, CM084269_1_15828548.0, CM084271_1_43816629.1, CM084272_1_33515302.0, CM084268_1_28845336.1, CM084268_1_49735243.1, CM084268_1_50216562.0, CM084266_1_68960407.1, CM084269_1_40338566.1, CM084270_1_4921031.0, CM084268_1_42008.0, CM084264_1_70173613.0, CM084267_1_2309126.0, CM084265_1_72926026.1, CM084270_1_47076332.0, CM084267_1_13226543.1, CM084269_1_45420483.1, CM084279_1_32644179.0, CM084271_1_346606.1, CM084266_1_69623578.0, CM084276_1_2874135.1, CM084274_1_4795858.0",30,"adapter_trim.F1-B21-pH8.bam",0.08,"adapter_trim.F1-B10-pH8.bam",-0.39,0.47 +"286","adapter_trim.F2-J225-pH7.bam","CM084272_1_41037487.1, CM084272_1_1894332.0, CM084264_1_6151084.1, CM084269_1_43524068.1, CM084270_1_8242296.1, CM084270_1_39396029.1, CM084278_1_31960704.0, CM084271_1_44105575.1, CM084277_1_6198938.1, CM084269_1_15828548.0, CM084271_1_43816629.1, CM084272_1_33515302.0, CM084268_1_28845336.1, CM084268_1_49735243.1, CM084268_1_50216562.0, CM084266_1_68960407.1, CM084269_1_40338566.1, CM084270_1_4921031.0, CM084268_1_42008.0, CM084264_1_70173613.0, CM084267_1_2309126.0, CM084265_1_72926026.1, CM084270_1_47076332.0, CM084267_1_13226543.1, CM084269_1_45420483.1, CM084279_1_32644179.0, CM084271_1_346606.1, CM084266_1_69623578.0, CM084276_1_2874135.1, CM084274_1_4795858.0",30,"adapter_trim.F1-B20-pH8.bam",0.08,"adapter_trim.F1-B1-pH8.bam",-0.12,0.2 +"287","adapter_trim.F2-J165-pH7.bam","CM084276_1_1856066.0, CM084275_1_327919.0, CM084266_1_69141161.0, CM084272_1_1327530.0, CM084266_1_69632434.1, CM084278_1_22667331.0, CM084277_1_30953064.1, CM084273_1_31862397.0, CM084265_1_64196888.0, CM084279_1_32666436.1, CM084276_1_38285696.0, CM084274_1_4773522.0, CM084267_1_2104179.1, CM084268_1_50679469.1, CM084277_1_29780116.0, CM084265_1_66689301.1, CM084270_1_39395913.0, CM084268_1_50739258.0, CM084269_1_15827787.1, CM084279_1_1060874.0, CM084266_1_69315458.1, CM084266_1_58087794.1, CM084278_1_23540735.1, CM084277_1_30643652.0, CM084266_1_68643398.1, CM084264_1_75338719.1, CM084271_1_44075853.0, CM084274_1_4808081.0, CM084275_1_25388529.1, CM084265_1_71797896.0",30,"adapter_trim.F1-B20-pH8.bam",-0.08,"adapter_trim.F1-B11-pH8.bam",-0.22,0.3 +"288","adapter_trim.F2-J186-pH7.bam","CM084265_1_1118701.1, CM084274_1_4796871.1, CM084272_1_33452338.0, CM084276_1_25807604.0, CM084268_1_1508049.1, CM084271_1_44075859.1, CM084277_1_18545080.1, CM084268_1_49719742.0, CM084276_1_25813397.0, CM084265_1_70597838.1, CM084265_1_64584031.0, CM084264_1_70188206.1, CM084277_1_10628755.0, CM084265_1_70979994.0, CM084271_1_44077319.1, CM084271_1_3823416.1, CM084269_1_35627100.1, CM084267_1_13261449.0, CM084276_1_1500414.1, CM084275_1_1212337.1, CM084268_1_3691160.1, CM084270_1_39395894.0, CM084271_1_3805848.1, CM084270_1_42355544.0, CM084272_1_33497675.1, CM084265_1_72078910.1, CM084267_1_6421555.0, CM084275_1_2509962.0, CM084269_1_4628639.0, CM084271_1_276716.0",30,"adapter_trim.F1-B25-pH8.bam",-0.67,"adapter_trim.F1-B3-pH8.bam",-0.16,0.83 +"289","adapter_trim.F2-J224-pH7.bam","CM084265_1_1118701.1, CM084274_1_4796871.1, CM084272_1_33452338.0, CM084276_1_25807604.0, CM084268_1_1508049.1, CM084271_1_44075859.1, CM084277_1_18545080.1, CM084268_1_49719742.0, CM084276_1_25813397.0, CM084265_1_70597838.1, CM084265_1_64584031.0, CM084264_1_70188206.1, CM084277_1_10628755.0, CM084265_1_70979994.0, CM084271_1_44077319.1, CM084271_1_3823416.1, CM084269_1_35627100.1, CM084267_1_13261449.0, CM084276_1_1500414.1, CM084275_1_1212337.1, CM084268_1_3691160.1, CM084270_1_39395894.0, CM084271_1_3805848.1, CM084270_1_42355544.0, CM084272_1_33497675.1, CM084265_1_72078910.1, CM084267_1_6421555.0, CM084275_1_2509962.0, CM084269_1_4628639.0, CM084271_1_276716.0",30,"adapter_trim.F1-B8-pH8.bam",0.22,"adapter_trim.F1-B3-pH8.bam",0.1,0.32 +"290","adapter_trim.F2-J227-pH7.bam","CM084265_1_1118701.1, CM084274_1_4796871.1, CM084272_1_33452338.0, CM084276_1_25807604.0, CM084268_1_1508049.1, CM084271_1_44075859.1, CM084277_1_18545080.1, CM084268_1_49719742.0, CM084276_1_25813397.0, CM084265_1_70597838.1, CM084265_1_64584031.0, CM084264_1_70188206.1, CM084277_1_10628755.0, CM084265_1_70979994.0, CM084271_1_44077319.1, CM084271_1_3823416.1, CM084269_1_35627100.1, CM084267_1_13261449.0, CM084276_1_1500414.1, CM084275_1_1212337.1, CM084268_1_3691160.1, CM084270_1_39395894.0, CM084271_1_3805848.1, CM084270_1_42355544.0, CM084272_1_33497675.1, CM084265_1_72078910.1, CM084267_1_6421555.0, CM084275_1_2509962.0, CM084269_1_4628639.0, CM084271_1_276716.0",30,"adapter_trim.F1-B25-pH8.bam",-0.4,"adapter_trim.F1-B5-pH8.bam",-0.31,0.71 +"291","adapter_trim.F2-J185-pH7.bam","CM084276_1_38558507.1, CM084265_1_59221213.1, CM084266_1_66377772.0, CM084272_1_1894340.0, CM084279_1_1064861.1, CM084269_1_15799434.1, CM084279_1_649298.1, CM084267_1_11257252.1, CM084276_1_1856082.1, CM084270_1_46588167.1, CM084266_1_1230901.1, CM084275_1_25396988.0, CM084274_1_4793173.0, CM084266_1_62460034.0, CM084277_1_1858867.0, CM084274_1_4732023.1, CM084267_1_2163704.1, CM084271_1_3819764.1, CM084267_1_2233926.0, CM084268_1_45574.0, CM084277_1_18535852.0, CM084267_1_3748455.1, CM084266_1_68643487.1, CM084274_1_4694558.1, CM084274_1_42859583.0, CM084275_1_36059252.1, CM084274_1_42473136.1, CM084267_1_11257220.1, CM084269_1_15828545.1, CM084279_1_32915259.0",30,"adapter_trim.F1-B8-pH8.bam",-0.29,"adapter_trim.F1-B5-pH8.bam",-0.29,0.58 +"292","adapter_trim.F2-B10-pH7.bam","CM084276_1_38558507.1, CM084265_1_59221213.1, CM084266_1_66377772.0, CM084272_1_1894340.0, CM084279_1_1064861.1, CM084269_1_15799434.1, CM084279_1_649298.1, CM084267_1_11257252.1, CM084276_1_1856082.1, CM084270_1_46588167.1, CM084266_1_1230901.1, CM084275_1_25396988.0, CM084274_1_4793173.0, CM084266_1_62460034.0, CM084277_1_1858867.0, CM084274_1_4732023.1, CM084267_1_2163704.1, CM084271_1_3819764.1, CM084267_1_2233926.0, CM084268_1_45574.0, CM084277_1_18535852.0, CM084267_1_3748455.1, CM084266_1_68643487.1, CM084274_1_4694558.1, CM084274_1_42859583.0, CM084275_1_36059252.1, CM084274_1_42473136.1, CM084267_1_11257220.1, CM084269_1_15828545.1, CM084279_1_32915259.0",30,"adapter_trim.F1-B20-pH8.bam",-0.42,"adapter_trim.F1-B1-pH8.bam",0.02,0.44 +"293","adapter_trim.F2-J225-pH7.bam","CM084273_1_268153.0, CM084275_1_39774847.1, CM084276_1_20157194.1, CM084265_1_71820726.0, CM084265_1_64735166.1, CM084273_1_31865817.0, CM084276_1_1856904.0, CM084275_1_25388888.0, CM084270_1_47077588.1, CM084265_1_71796309.1, CM084270_1_4920918.0, CM084266_1_69794604.0, CM084275_1_400262.0, CM084269_1_1558064.0, CM084265_1_71796309.0, CM084274_1_4708063.0, CM084265_1_72636285.1, CM084279_1_10157010.0, CM084271_1_37244938.1, CM084264_1_73291570.0, CM084277_1_29782028.1, CM084268_1_50216537.1, CM084264_1_69870962.1, CM084271_1_760000.1, CM084274_1_4674060.1, CM084264_1_15064138.0, CM084265_1_64969585.0, CM084265_1_71831401.1, CM084268_1_50323439.0, CM084266_1_61737006.0",30,"adapter_trim.F1-B20-pH8.bam",-0.26,"adapter_trim.F1-B8-pH8.bam",-0.26,0.52 +"294","adapter_trim.F2-B1-pH7.bam","CM084273_1_268153.0, CM084275_1_39774847.1, CM084276_1_20157194.1, CM084265_1_71820726.0, CM084265_1_64735166.1, CM084273_1_31865817.0, CM084276_1_1856904.0, CM084275_1_25388888.0, CM084270_1_47077588.1, CM084265_1_71796309.1, CM084270_1_4920918.0, CM084266_1_69794604.0, CM084275_1_400262.0, CM084269_1_1558064.0, CM084265_1_71796309.0, CM084274_1_4708063.0, CM084265_1_72636285.1, CM084279_1_10157010.0, CM084271_1_37244938.1, CM084264_1_73291570.0, CM084277_1_29782028.1, CM084268_1_50216537.1, CM084264_1_69870962.1, CM084271_1_760000.1, CM084274_1_4674060.1, CM084264_1_15064138.0, CM084265_1_64969585.0, CM084265_1_71831401.1, CM084268_1_50323439.0, CM084266_1_61737006.0",30,"adapter_trim.F1-B21-pH8.bam",-0.17,"adapter_trim.F1-B11-pH8.bam",-0.29,0.46 +"295","adapter_trim.F2-J189-pH7.bam","CM084277_1_1858867.1, CM084269_1_15809957.0, CM084278_1_22667297.1, CM084269_1_43525348.0, CM084267_1_5830233.0, CM084272_1_7002400.0, CM084270_1_47076329.0, CM084274_1_4862784.0, CM084269_1_43525348.1, CM084264_1_34294469.1, CM084269_1_47563826.0, CM084271_1_44091708.0, CM084271_1_43817223.1, CM084270_1_42349010.0, CM084275_1_29098652.0, CM084265_1_60316111.0, CM084274_1_4708749.1, CM084274_1_4861946.0, CM084278_1_4074299.0, CM084275_1_25388559.0, CM084266_1_68960407.1, CM084277_1_29208393.1, CM084265_1_68869208.0, CM084266_1_23295949.0, CM084265_1_59220865.1, CM084268_1_49735243.0, CM084271_1_19655939.1, CM084264_1_69902276.0, CM084271_1_43860422.0, CM084264_1_64489814.0",30,"adapter_trim.F1-B20-pH8.bam",-0.19,"adapter_trim.F1-B7-pH8.bam",0.05,0.24 +"296","adapter_trim.F2-J206-pH7.bam","CM084277_1_1858867.1, CM084269_1_15809957.0, CM084278_1_22667297.1, CM084269_1_43525348.0, CM084267_1_5830233.0, CM084272_1_7002400.0, CM084270_1_47076329.0, CM084274_1_4862784.0, CM084269_1_43525348.1, CM084264_1_34294469.1, CM084269_1_47563826.0, CM084271_1_44091708.0, CM084271_1_43817223.1, CM084270_1_42349010.0, CM084275_1_29098652.0, CM084265_1_60316111.0, CM084274_1_4708749.1, CM084274_1_4861946.0, CM084278_1_4074299.0, CM084275_1_25388559.0, CM084266_1_68960407.1, CM084277_1_29208393.1, CM084265_1_68869208.0, CM084266_1_23295949.0, CM084265_1_59220865.1, CM084268_1_49735243.0, CM084271_1_19655939.1, CM084264_1_69902276.0, CM084271_1_43860422.0, CM084264_1_64489814.0",30,"adapter_trim.F1-B20-pH8.bam",-0.23,"adapter_trim.F1-B4-pH8.bam",0.19,0.42 +"297","adapter_trim.F2-J184-pH7.bam","CM084265_1_1118701.1, CM084269_1_42862803.0, CM084269_1_1580179.1, CM084272_1_33453891.0, CM084271_1_43851366.0, CM084264_1_69757037.1, CM084279_1_31409037.0, CM084267_1_2910813.1, CM084268_1_1326636.0, CM084274_1_34977123.1, CM084265_1_68074267.0, CM084267_1_48167440.0, CM084269_1_1556132.0, CM084264_1_66077502.0, CM084265_1_70975032.1, CM084264_1_74035910.1, CM084268_1_50225498.0, CM084277_1_5804275.1, CM084268_1_50693767.0, CM084273_1_31862397.1, CM084269_1_46688972.1, CM084274_1_5046215.0, CM084271_1_39686056.0, CM084267_1_6421422.1, CM084276_1_38970482.1, CM084265_1_68072879.1, CM084274_1_4870202.0, CM084278_1_25832327.0, CM084279_1_1072367.1, CM084267_1_6420915.1",30,"adapter_trim.F1-B15-pH8.bam",-0.48,"adapter_trim.F1-B11-pH8.bam",-0.27,0.75 +"298","adapter_trim.F2-J223-pH7.bam","CM084265_1_1118701.1, CM084269_1_42862803.0, CM084269_1_1580179.1, CM084272_1_33453891.0, CM084271_1_43851366.0, CM084264_1_69757037.1, CM084279_1_31409037.0, CM084267_1_2910813.1, CM084268_1_1326636.0, CM084274_1_34977123.1, CM084265_1_68074267.0, CM084267_1_48167440.0, CM084269_1_1556132.0, CM084264_1_66077502.0, CM084265_1_70975032.1, CM084264_1_74035910.1, CM084268_1_50225498.0, CM084277_1_5804275.1, CM084268_1_50693767.0, CM084273_1_31862397.1, CM084269_1_46688972.1, CM084274_1_5046215.0, CM084271_1_39686056.0, CM084267_1_6421422.1, CM084276_1_38970482.1, CM084265_1_68072879.1, CM084274_1_4870202.0, CM084278_1_25832327.0, CM084279_1_1072367.1, CM084267_1_6420915.1",30,"adapter_trim.F1-B20-pH8.bam",-0.23,"adapter_trim.F1-B1-pH8.bam",-0.45,0.68 +"299","adapter_trim.F2-J201-pH7.bam","CM084266_1_50301553.0, CM084269_1_40451682.0, CM084264_1_6990394.1, CM084279_1_161041.0, CM084276_1_37353162.0, CM084276_1_38772790.0, CM084269_1_39737118.1, CM084276_1_31737936.1, CM084268_1_3697521.0, CM084268_1_50225492.1, CM084279_1_32640578.0, CM084275_1_38169337.0, CM084275_1_66842.1, CM084267_1_2646659.1, CM084272_1_33597658.0, CM084273_1_42285571.0, CM084274_1_4694254.1, CM084265_1_68806465.0, CM084267_1_8118559.0, CM084277_1_29780153.1, CM084270_1_47077588.0, CM084267_1_2908060.1, CM084274_1_34977142.1, CM084274_1_4729950.0, CM084279_1_10149628.0, CM084276_1_20157323.0, CM084266_1_70706208.0, CM084264_1_73311139.0, CM084267_1_11257262.0, CM084268_1_2832731.1",30,"adapter_trim.F1-B15-pH8.bam",-0.31,"adapter_trim.F1-B10-pH8.bam",-0.14,0.45 +"300","adapter_trim.F2-J204-pH7.bam","CM084266_1_50301553.0, CM084269_1_40451682.0, CM084264_1_6990394.1, CM084279_1_161041.0, CM084276_1_37353162.0, CM084276_1_38772790.0, CM084269_1_39737118.1, CM084276_1_31737936.1, CM084268_1_3697521.0, CM084268_1_50225492.1, CM084279_1_32640578.0, CM084275_1_38169337.0, CM084275_1_66842.1, CM084267_1_2646659.1, CM084272_1_33597658.0, CM084273_1_42285571.0, CM084274_1_4694254.1, CM084265_1_68806465.0, CM084267_1_8118559.0, CM084277_1_29780153.1, CM084270_1_47077588.0, CM084267_1_2908060.1, CM084274_1_34977142.1, CM084274_1_4729950.0, CM084279_1_10149628.0, CM084276_1_20157323.0, CM084266_1_70706208.0, CM084264_1_73311139.0, CM084267_1_11257262.0, CM084268_1_2832731.1",30,"adapter_trim.F1-B20-pH8.bam",-0.5,"adapter_trim.F1-B3-pH8.bam",0.04,0.54 +"301","adapter_trim.F2-J205-pH7.bam","CM084266_1_50301553.0, CM084269_1_40451682.0, CM084264_1_6990394.1, CM084279_1_161041.0, CM084276_1_37353162.0, CM084276_1_38772790.0, CM084269_1_39737118.1, CM084276_1_31737936.1, CM084268_1_3697521.0, CM084268_1_50225492.1, CM084279_1_32640578.0, CM084275_1_38169337.0, CM084275_1_66842.1, CM084267_1_2646659.1, CM084272_1_33597658.0, CM084273_1_42285571.0, CM084274_1_4694254.1, CM084265_1_68806465.0, CM084267_1_8118559.0, CM084277_1_29780153.1, CM084270_1_47077588.0, CM084267_1_2908060.1, CM084274_1_34977142.1, CM084274_1_4729950.0, CM084279_1_10149628.0, CM084276_1_20157323.0, CM084266_1_70706208.0, CM084264_1_73311139.0, CM084267_1_11257262.0, CM084268_1_2832731.1",30,"adapter_trim.F1-B20-pH8.bam",-0.54,"adapter_trim.F1-B11-pH8.bam",-0.11,0.65 +"302","adapter_trim.F2-B12-pH7.bam","CM084266_1_50301553.0, CM084269_1_40451682.0, CM084264_1_6990394.1, CM084279_1_161041.0, CM084276_1_37353162.0, CM084276_1_38772790.0, CM084269_1_39737118.1, CM084276_1_31737936.1, CM084268_1_3697521.0, CM084268_1_50225492.1, CM084279_1_32640578.0, CM084275_1_38169337.0, CM084275_1_66842.1, CM084267_1_2646659.1, CM084272_1_33597658.0, CM084273_1_42285571.0, CM084274_1_4694254.1, CM084265_1_68806465.0, CM084267_1_8118559.0, CM084277_1_29780153.1, CM084270_1_47077588.0, CM084267_1_2908060.1, CM084274_1_34977142.1, CM084274_1_4729950.0, CM084279_1_10149628.0, CM084276_1_20157323.0, CM084266_1_70706208.0, CM084264_1_73311139.0, CM084267_1_11257262.0, CM084268_1_2832731.1",30,"adapter_trim.F1-B8-pH8.bam",-0.41,"adapter_trim.F1-B7-pH8.bam",-0.49,0.9 +"303","adapter_trim.F2-B15-pH7.bam","CM084266_1_50301553.0, CM084269_1_40451682.0, CM084264_1_6990394.1, CM084279_1_161041.0, CM084276_1_37353162.0, CM084276_1_38772790.0, CM084269_1_39737118.1, CM084276_1_31737936.1, CM084268_1_3697521.0, CM084268_1_50225492.1, CM084279_1_32640578.0, CM084275_1_38169337.0, CM084275_1_66842.1, CM084267_1_2646659.1, CM084272_1_33597658.0, CM084273_1_42285571.0, CM084274_1_4694254.1, CM084265_1_68806465.0, CM084267_1_8118559.0, CM084277_1_29780153.1, CM084270_1_47077588.0, CM084267_1_2908060.1, CM084274_1_34977142.1, CM084274_1_4729950.0, CM084279_1_10149628.0, 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CM084266_1_1230887.1, CM084268_1_50321855.1, CM084266_1_64725843.1, CM084269_1_12904900.0, CM084274_1_4734019.0, CM084264_1_69287125.0, CM084274_1_4674050.1, CM084274_1_4863917.0, CM084265_1_72992173.0, CM084269_1_15813374.0, CM084266_1_69625511.0, CM084265_1_64581822.1, CM084266_1_63468226.1, CM084271_1_43339301.1",30,"adapter_trim.F1-B20-pH8.bam",-0.81,"adapter_trim.F1-B9-pH8.bam",-0.51,1.32 +"308","adapter_trim.F2-J186-pH7.bam","CM084265_1_71792056.0, CM084274_1_4708223.0, CM084279_1_32917233.1, CM084274_1_4730081.1, CM084274_1_4795468.0, CM084266_1_69793914.0, CM084264_1_26771545.1, CM084264_1_34293018.1, CM084264_1_75480216.0, CM084270_1_4920961.1, CM084271_1_44086137.1, CM084265_1_794843.1, CM084265_1_64733351.1, CM084269_1_15820188.0, CM084265_1_8362486.1, CM084279_1_1070294.1, CM084271_1_26325716.0, CM084270_1_10495977.1, CM084266_1_67097921.1, CM084269_1_43525271.0, CM084266_1_69793931.0, CM084268_1_3691693.0, CM084265_1_794843.0, CM084265_1_69007603.1, CM084266_1_38532340.1, 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CM084271_1_26325716.0, CM084270_1_10495977.1, CM084266_1_67097921.1, CM084269_1_43525271.0, CM084266_1_69793931.0, CM084268_1_3691693.0, CM084265_1_794843.0, CM084265_1_69007603.1, CM084266_1_38532340.1, CM084264_1_8098050.0, CM084275_1_66811.0, CM084265_1_58531646.0, CM084272_1_33616442.1, CM084271_1_43860460.0",30,"adapter_trim.F1-B15-pH8.bam",-0.06,"adapter_trim.F1-B4-pH8.bam",0.04,0.1 +"313","adapter_trim.F2-J201-pH7.bam","CM084274_1_4773522.1, CM084267_1_2653032.1, CM084272_1_18188620.1, CM084268_1_50224896.0, CM084269_1_45420483.1, CM084265_1_58484259.1, CM084272_1_23578669.1, CM084270_1_4920911.0, CM084272_1_18574380.1, CM084276_1_38450614.1, CM084264_1_72054053.1, CM084267_1_832141.1, CM084266_1_65571765.0, CM084272_1_1327530.0, CM084268_1_28845816.0, CM084269_1_39736991.0, CM084275_1_35717364.0, CM084270_1_26890196.0, CM084277_1_6198930.1, CM084264_1_70175545.1, CM084273_1_31862787.1, CM084265_1_64586071.0, CM084266_1_71166433.0, CM084273_1_7839417.1, CM084271_1_3816215.0, 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CM084266_1_68882944.0, CM084266_1_59364074.1, CM084279_1_1196441.0, CM084265_1_65322091.0, CM084278_1_20701460.1, CM084276_1_1849333.0, CM084275_1_66842.0, CM084268_1_28845439.1, CM084265_1_1229890.1, CM084266_1_70706207.0, CM084275_1_39780930.1, CM084278_1_20734392.1, CM084279_1_10149534.1, CM084269_1_43528587.0",30,"adapter_trim.F1-B8-pH8.bam",-0.4,"adapter_trim.F1-B1-pH8.bam",-0.24,0.64 +"318","adapter_trim.F2-J223-pH7.bam","CM084274_1_4726637.1, CM084266_1_68659872.1, CM084268_1_9292527.0, CM084273_1_21179215.0, CM084274_1_4792130.0, CM084269_1_1549405.0, CM084275_1_1304704.0, CM084276_1_56048.1, CM084265_1_70801101.1, CM084264_1_74721251.0, CM084273_1_4090291.1, CM084271_1_1034868.1, CM084268_1_28845509.1, CM084265_1_59221291.1, CM084270_1_39395973.1, CM084265_1_70979980.0, CM084266_1_57888582.1, CM084268_1_3691693.0, CM084277_1_1858867.1, CM084275_1_39420927.0, CM084269_1_12905590.1, CM084272_1_18188700.0, CM084275_1_29098652.1, CM084275_1_25388529.1, CM084278_1_22667296.1, CM084279_1_10156951.1, CM084278_1_20701768.0, CM084278_1_23542073.0, CM084266_1_66383611.1, CM084264_1_34292374.1",30,"adapter_trim.F1-B20-pH8.bam",-0.21,"adapter_trim.F1-B11-pH8.bam",-0.8,1.01 +"319","adapter_trim.F2-J227-pH7.bam","CM084274_1_4726637.1, CM084266_1_68659872.1, CM084268_1_9292527.0, CM084273_1_21179215.0, CM084274_1_4792130.0, CM084269_1_1549405.0, CM084275_1_1304704.0, CM084276_1_56048.1, CM084265_1_70801101.1, CM084264_1_74721251.0, CM084273_1_4090291.1, CM084271_1_1034868.1, CM084268_1_28845509.1, CM084265_1_59221291.1, CM084270_1_39395973.1, CM084265_1_70979980.0, CM084266_1_57888582.1, CM084268_1_3691693.0, CM084277_1_1858867.1, CM084275_1_39420927.0, CM084269_1_12905590.1, CM084272_1_18188700.0, CM084275_1_29098652.1, CM084275_1_25388529.1, CM084278_1_22667296.1, CM084279_1_10156951.1, CM084278_1_20701768.0, CM084278_1_23542073.0, CM084266_1_66383611.1, CM084264_1_34292374.1",30,"adapter_trim.F1-B8-pH8.bam",-0.56,"adapter_trim.F1-B9-pH8.bam",-0.57,1.13 +"320","adapter_trim.F2-J201-pH7.bam","CM084268_1_3703420.1, CM084278_1_23554760.1, CM084268_1_50681537.0, CM084264_1_73931173.0, CM084264_1_39013.0, CM084269_1_4626408.0, CM084266_1_64164372.1, CM084264_1_34301201.0, CM084275_1_23083662.1, CM084278_1_15228737.1, CM084268_1_3261991.0, CM084278_1_15228710.0, CM084274_1_4788623.0, CM084272_1_33462360.0, CM084276_1_2855799.1, CM084266_1_58087776.1, CM084265_1_8361584.1, CM084272_1_43469486.0, CM084271_1_43860456.1, CM084269_1_46694331.1, CM084267_1_832141.1, CM084269_1_4626408.0, CM084275_1_400276.1, CM084264_1_70174668.1, CM084275_1_35717367.0, CM084265_1_19672164.1, CM084270_1_4920911.0, CM084266_1_23321836.1, CM084265_1_71820616.1, CM084271_1_379028.1",30,"adapter_trim.F1-B15-pH8.bam",-0.27,"adapter_trim.F1-B11-pH8.bam",-0.07,0.34 +"321","adapter_trim.F2-J204-pH7.bam","CM084268_1_3703420.1, CM084278_1_23554760.1, CM084268_1_50681537.0, CM084264_1_73931173.0, CM084264_1_39013.0, CM084269_1_4626408.0, CM084266_1_64164372.1, CM084264_1_34301201.0, CM084275_1_23083662.1, CM084278_1_15228737.1, CM084268_1_3261991.0, CM084278_1_15228710.0, CM084274_1_4788623.0, CM084272_1_33462360.0, CM084276_1_2855799.1, CM084266_1_58087776.1, CM084265_1_8361584.1, CM084272_1_43469486.0, CM084271_1_43860456.1, CM084269_1_46694331.1, CM084267_1_832141.1, CM084269_1_4626408.0, CM084275_1_400276.1, CM084264_1_70174668.1, CM084275_1_35717367.0, CM084265_1_19672164.1, CM084270_1_4920911.0, CM084266_1_23321836.1, CM084265_1_71820616.1, CM084271_1_379028.1",30,"adapter_trim.F1-B15-pH8.bam",-0.32,"adapter_trim.F1-B11-pH8.bam",0.02,0.34 +"322","adapter_trim.F2-J205-pH7.bam","CM084268_1_3703420.1, CM084278_1_23554760.1, CM084268_1_50681537.0, CM084264_1_73931173.0, CM084264_1_39013.0, CM084269_1_4626408.0, CM084266_1_64164372.1, CM084264_1_34301201.0, CM084275_1_23083662.1, CM084278_1_15228737.1, CM084268_1_3261991.0, CM084278_1_15228710.0, CM084274_1_4788623.0, CM084272_1_33462360.0, CM084276_1_2855799.1, CM084266_1_58087776.1, CM084265_1_8361584.1, CM084272_1_43469486.0, CM084271_1_43860456.1, CM084269_1_46694331.1, CM084267_1_832141.1, CM084269_1_4626408.0, CM084275_1_400276.1, CM084264_1_70174668.1, CM084275_1_35717367.0, CM084265_1_19672164.1, CM084270_1_4920911.0, CM084266_1_23321836.1, CM084265_1_71820616.1, CM084271_1_379028.1",30,"adapter_trim.F1-B8-pH8.bam",0.14,"adapter_trim.F1-B11-pH8.bam",-0.12,0.26 +"323","adapter_trim.F2-J224-pH7.bam","CM084277_1_30026693.0, CM084272_1_18188624.1, CM084274_1_11619945.1, CM084274_1_21933035.1, CM084275_1_8878532.0, CM084266_1_70706263.0, CM084266_1_23317745.0, CM084265_1_70597838.0, CM084271_1_44104315.0, CM084271_1_37170448.0, CM084272_1_33453804.1, CM084264_1_72117199.0, CM084268_1_50321875.1, CM084267_1_13261464.1, CM084267_1_8118559.0, CM084268_1_50200456.1, CM084266_1_70530691.0, CM084270_1_4921106.1, CM084274_1_4869897.1, CM084266_1_66483893.1, CM084266_1_63468235.1, CM084269_1_15818485.0, CM084276_1_38072621.0, CM084266_1_69723117.1, CM084275_1_39776618.0, CM084271_1_19655820.1, CM084279_1_10156984.1, CM084272_1_1596808.0, CM084271_1_44086137.1, CM084266_1_58093839.1",30,"adapter_trim.F1-B20-pH8.bam",-0.06,"adapter_trim.F1-B5-pH8.bam",-0.13,0.19 +"324","adapter_trim.F2-B18-pH7.bam","CM084277_1_30026693.0, CM084272_1_18188624.1, CM084274_1_11619945.1, CM084274_1_21933035.1, CM084275_1_8878532.0, CM084266_1_70706263.0, CM084266_1_23317745.0, CM084265_1_70597838.0, CM084271_1_44104315.0, CM084271_1_37170448.0, CM084272_1_33453804.1, CM084264_1_72117199.0, CM084268_1_50321875.1, CM084267_1_13261464.1, CM084267_1_8118559.0, CM084268_1_50200456.1, CM084266_1_70530691.0, CM084270_1_4921106.1, CM084274_1_4869897.1, CM084266_1_66483893.1, CM084266_1_63468235.1, CM084269_1_15818485.0, CM084276_1_38072621.0, CM084266_1_69723117.1, CM084275_1_39776618.0, CM084271_1_19655820.1, CM084279_1_10156984.1, CM084272_1_1596808.0, CM084271_1_44086137.1, CM084266_1_58093839.1",30,"adapter_trim.F1-B25-pH8.bam",0.03,"adapter_trim.F1-B4-pH8.bam",-0.15,0.18 +"325","adapter_trim.F2-J223-pH7.bam","CM084275_1_2509962.1, CM084267_1_832141.0, CM084269_1_15823106.1, CM084266_1_46766313.0, CM084274_1_4734035.0, CM084268_1_22932611.1, CM084270_1_2585592.1, CM084266_1_57886153.1, CM084267_1_13229742.0, CM084264_1_66561947.0, CM084276_1_59031.0, CM084266_1_70707608.1, CM084277_1_18535877.1, CM084279_1_649336.1, CM084271_1_3821109.0, CM084264_1_69870962.1, CM084274_1_4870202.1, CM084274_1_4793177.1, CM084265_1_71899241.0, CM084272_1_18574380.1, CM084271_1_19656061.0, CM084268_1_46448.0, CM084276_1_36515301.0, CM084269_1_15828548.1, CM084266_1_64725843.0, CM084269_1_43523897.0, CM084264_1_70174663.1, CM084265_1_60316158.1, CM084274_1_4792092.0, CM084278_1_32252661.0",30,"adapter_trim.F1-B15-pH8.bam",-0.29,"adapter_trim.F1-B4-pH8.bam",-0.08,0.37 +"326","adapter_trim.F2-B25-pH7.bam","CM084275_1_2509962.1, CM084267_1_832141.0, CM084269_1_15823106.1, CM084266_1_46766313.0, CM084274_1_4734035.0, CM084268_1_22932611.1, CM084270_1_2585592.1, CM084266_1_57886153.1, CM084267_1_13229742.0, CM084264_1_66561947.0, CM084276_1_59031.0, CM084266_1_70707608.1, CM084277_1_18535877.1, CM084279_1_649336.1, CM084271_1_3821109.0, CM084264_1_69870962.1, CM084274_1_4870202.1, CM084274_1_4793177.1, CM084265_1_71899241.0, CM084272_1_18574380.1, CM084271_1_19656061.0, CM084268_1_46448.0, CM084276_1_36515301.0, CM084269_1_15828548.1, CM084266_1_64725843.0, CM084269_1_43523897.0, CM084264_1_70174663.1, CM084265_1_60316158.1, CM084274_1_4792092.0, CM084278_1_32252661.0",30,"adapter_trim.F1-B25-pH8.bam",-0.14,"adapter_trim.F1-B11-pH8.bam",-0.29,0.43 +"327","adapter_trim.F2-B18-pH7.bam","CM084264_1_69861978.0, CM084276_1_38072633.1, CM084266_1_71166412.0, CM084276_1_1856888.1, CM084278_1_23542073.1, CM084269_1_43524104.1, CM084265_1_791030.1, CM084275_1_25393416.0, CM084273_1_268148.0, CM084269_1_35627068.1, CM084274_1_4863872.0, CM084265_1_64733395.1, CM084267_1_51000137.1, CM084264_1_26771545.1, CM084265_1_70595162.0, CM084265_1_68869496.0, CM084276_1_38558670.1, CM084266_1_57882847.0, CM084273_1_42285391.0, CM084274_1_4778496.1, CM084265_1_70595159.1, CM084275_1_36059096.0, CM084269_1_1556257.0, CM084278_1_5144637.0, CM084266_1_23321803.1, CM084267_1_2908957.0, CM084264_1_8098032.1, CM084265_1_72978107.0, CM084265_1_65322091.1, CM084275_1_2509952.0",30,"adapter_trim.F1-B8-pH8.bam",-0.15,"adapter_trim.F1-B4-pH8.bam",0.04,0.19 +"328","adapter_trim.F2-J189-pH7.bam","CM084269_1_15799394.0, CM084275_1_38169338.0, CM084269_1_42862704.0, CM084278_1_279479.0, CM084275_1_66842.0, CM084266_1_65576820.1, CM084270_1_4920904.1, CM084266_1_69794604.1, CM084265_1_70979980.1, CM084276_1_1500412.1, CM084267_1_2652518.0, CM084267_1_2646659.0, CM084266_1_58087776.1, CM084267_1_5881718.0, CM084271_1_44073395.1, CM084267_1_2309126.0, CM084271_1_44190420.1, CM084264_1_69862119.1, CM084268_1_2696122.0, CM084267_1_13261464.1, CM084270_1_39395973.0, CM084265_1_71265340.0, CM084265_1_68714893.1, CM084268_1_2832731.1, CM084274_1_34976974.1, CM084273_1_31863691.0, CM084265_1_71831292.0, CM084278_1_16767353.0, CM084278_1_22667362.1, CM084266_1_64725843.0",30,"adapter_trim.F1-B15-pH8.bam",-0.02,"adapter_trim.F1-B7-pH8.bam",-0.1,0.12 +"329","adapter_trim.F2-J201-pH7.bam","CM084269_1_15799394.0, CM084275_1_38169338.0, CM084269_1_42862704.0, CM084278_1_279479.0, CM084275_1_66842.0, CM084266_1_65576820.1, CM084270_1_4920904.1, CM084266_1_69794604.1, CM084265_1_70979980.1, CM084276_1_1500412.1, CM084267_1_2652518.0, CM084267_1_2646659.0, CM084266_1_58087776.1, CM084267_1_5881718.0, CM084271_1_44073395.1, CM084267_1_2309126.0, CM084271_1_44190420.1, CM084264_1_69862119.1, CM084268_1_2696122.0, CM084267_1_13261464.1, CM084270_1_39395973.0, CM084265_1_71265340.0, CM084265_1_68714893.1, CM084268_1_2832731.1, CM084274_1_34976974.1, CM084273_1_31863691.0, CM084265_1_71831292.0, CM084278_1_16767353.0, CM084278_1_22667362.1, CM084266_1_64725843.0",30,"adapter_trim.F1-B15-pH8.bam",-0.11,"adapter_trim.F1-B3-pH8.bam",-0.19,0.3 +"330","adapter_trim.F2-B2-pH7.bam","CM084269_1_15799394.0, CM084275_1_38169338.0, CM084269_1_42862704.0, CM084278_1_279479.0, CM084275_1_66842.0, CM084266_1_65576820.1, CM084270_1_4920904.1, CM084266_1_69794604.1, CM084265_1_70979980.1, CM084276_1_1500412.1, CM084267_1_2652518.0, CM084267_1_2646659.0, CM084266_1_58087776.1, CM084267_1_5881718.0, CM084271_1_44073395.1, CM084267_1_2309126.0, CM084271_1_44190420.1, CM084264_1_69862119.1, CM084268_1_2696122.0, CM084267_1_13261464.1, CM084270_1_39395973.0, CM084265_1_71265340.0, CM084265_1_68714893.1, CM084268_1_2832731.1, CM084274_1_34976974.1, CM084273_1_31863691.0, CM084265_1_71831292.0, CM084278_1_16767353.0, CM084278_1_22667362.1, CM084266_1_64725843.0",30,"adapter_trim.F1-B8-pH8.bam",-0.52,"adapter_trim.F1-B11-pH8.bam",-0.41,0.93 +"331","adapter_trim.F2-B4-pH7.bam","CM084269_1_15799394.0, CM084275_1_38169338.0, CM084269_1_42862704.0, CM084278_1_279479.0, CM084275_1_66842.0, CM084266_1_65576820.1, CM084270_1_4920904.1, CM084266_1_69794604.1, CM084265_1_70979980.1, CM084276_1_1500412.1, CM084267_1_2652518.0, CM084267_1_2646659.0, CM084266_1_58087776.1, CM084267_1_5881718.0, CM084271_1_44073395.1, CM084267_1_2309126.0, CM084271_1_44190420.1, CM084264_1_69862119.1, CM084268_1_2696122.0, CM084267_1_13261464.1, CM084270_1_39395973.0, CM084265_1_71265340.0, CM084265_1_68714893.1, CM084268_1_2832731.1, CM084274_1_34976974.1, CM084273_1_31863691.0, CM084265_1_71831292.0, CM084278_1_16767353.0, CM084278_1_22667362.1, CM084266_1_64725843.0",30,"adapter_trim.F1-B8-pH8.bam",-0.27,"adapter_trim.F1-B9-pH8.bam",-0.38,0.65 +"332","adapter_trim.F2-J162-pH7.bam","CM084270_1_47076365.1, CM084272_1_1311984.0, CM084265_1_1229890.0, CM084276_1_62244.0, CM084274_1_42859664.0, CM084264_1_69712159.1, CM084275_1_400292.0, CM084264_1_34294397.0, CM084268_1_49719742.1, CM084271_1_344606.1, CM084264_1_70175564.0, CM084275_1_2509498.0, CM084275_1_38995254.0, CM084265_1_61648602.1, CM084271_1_44073395.1, CM084266_1_816291.0, CM084264_1_72054047.0, CM084269_1_12905590.0, CM084279_1_1070298.1, CM084271_1_43849883.1, CM084266_1_46766309.1, CM084266_1_59802412.1, CM084272_1_1596710.1, CM084270_1_8242343.1, CM084279_1_32971482.1, CM084264_1_34300372.0, CM084271_1_344491.0, CM084266_1_70706235.1, CM084273_1_31865717.1, CM084265_1_73060812.1",30,"adapter_trim.F1-B25-pH8.bam",-0.16,"adapter_trim.F1-B4-pH8.bam",0.09,0.25 +"333","adapter_trim.F2-J204-pH7.bam","CM084270_1_47076365.1, CM084272_1_1311984.0, CM084265_1_1229890.0, CM084276_1_62244.0, CM084274_1_42859664.0, CM084264_1_69712159.1, CM084275_1_400292.0, CM084264_1_34294397.0, CM084268_1_49719742.1, CM084271_1_344606.1, CM084264_1_70175564.0, CM084275_1_2509498.0, CM084275_1_38995254.0, CM084265_1_61648602.1, CM084271_1_44073395.1, CM084266_1_816291.0, CM084264_1_72054047.0, CM084269_1_12905590.0, CM084279_1_1070298.1, CM084271_1_43849883.1, CM084266_1_46766309.1, CM084266_1_59802412.1, CM084272_1_1596710.1, CM084270_1_8242343.1, CM084279_1_32971482.1, CM084264_1_34300372.0, CM084271_1_344491.0, CM084266_1_70706235.1, CM084273_1_31865717.1, CM084265_1_73060812.1",30,"adapter_trim.F1-B25-pH8.bam",-0.33,"adapter_trim.F1-B7-pH8.bam",-0.39,0.72 +"334","adapter_trim.F2-J205-pH7.bam","CM084270_1_47076365.1, CM084272_1_1311984.0, CM084265_1_1229890.0, CM084276_1_62244.0, CM084274_1_42859664.0, CM084264_1_69712159.1, CM084275_1_400292.0, CM084264_1_34294397.0, CM084268_1_49719742.1, CM084271_1_344606.1, CM084264_1_70175564.0, CM084275_1_2509498.0, CM084275_1_38995254.0, CM084265_1_61648602.1, CM084271_1_44073395.1, CM084266_1_816291.0, CM084264_1_72054047.0, CM084269_1_12905590.0, CM084279_1_1070298.1, CM084271_1_43849883.1, CM084266_1_46766309.1, CM084266_1_59802412.1, CM084272_1_1596710.1, CM084270_1_8242343.1, CM084279_1_32971482.1, CM084264_1_34300372.0, CM084271_1_344491.0, CM084266_1_70706235.1, CM084273_1_31865717.1, CM084265_1_73060812.1",30,"adapter_trim.F1-B21-pH8.bam",-0.1,"adapter_trim.F1-B5-pH8.bam",-0.1,0.2 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CM084265_1_72071376.0, CM084264_1_34294396.1, CM084272_1_2073141.0, CM084272_1_18170845.0, CM084277_1_30631457.0, CM084264_1_2738113.1, CM084275_1_39491731.1, CM084270_1_46588177.1, CM084275_1_29098877.0, CM084270_1_1559641.0, CM084274_1_4695098.0, CM084269_1_45438470.1, CM084274_1_42859583.0, CM084265_1_1816569.1",30,"adapter_trim.F1-B25-pH8.bam",-0.11,"adapter_trim.F1-B9-pH8.bam",0.09,0.2 +"338","adapter_trim.F2-J223-pH7.bam","CM084272_1_33452045.1, CM084265_1_71794444.1, CM084279_1_32640578.0, CM084265_1_68868202.1, CM084265_1_68073022.0, CM084266_1_68519869.1, CM084267_1_699428.0, CM084266_1_50301523.1, CM084269_1_42862798.1, CM084271_1_3821109.0, CM084276_1_771542.1, CM084265_1_64528148.0, CM084269_1_35627230.0, CM084277_1_30611564.1, CM084269_1_39737155.1, CM084275_1_29098652.0, CM084266_1_65298589.0, CM084276_1_38775936.0, CM084272_1_18193991.1, CM084277_1_10628715.1, CM084271_1_44086139.0, CM084269_1_45423014.0, CM084272_1_2928852.0, CM084274_1_4863872.1, CM084266_1_70706263.0, 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CM084274_1_4778592.0, CM084272_1_18194957.0, CM084265_1_64736906.1, CM084279_1_10153273.1, CM084267_1_700054.0, CM084274_1_4708749.0, CM084274_1_4720394.0, CM084276_1_38552504.0, CM084278_1_16774023.0, CM084269_1_39736991.1, CM084279_1_10157010.1, CM084268_1_47694452.0, CM084269_1_1567491.0, CM084264_1_73283219.1",30,"adapter_trim.F1-B20-pH8.bam",-0.26,"adapter_trim.F1-B3-pH8.bam",-0.36,0.62 +"343","adapter_trim.F2-B2-pH7.bam","CM084277_1_30611605.1, CM084267_1_2165108.0, CM084267_1_2653032.0, CM084268_1_22040366.1, CM084265_1_68074592.1, CM084279_1_28791311.0, CM084278_1_32252684.1, CM084269_1_40336207.0, CM084270_1_26884058.0, CM084271_1_44073407.0, CM084274_1_4864709.1, CM084274_1_4696973.1, CM084276_1_1625423.1, CM084272_1_33452338.0, CM084268_1_2713890.0, CM084274_1_5120623.1, CM084265_1_60316111.0, CM084275_1_39776469.1, CM084264_1_7131437.0, CM084267_1_48167433.1, CM084267_1_6421555.1, CM084279_1_10149547.0, CM084265_1_69924624.1, CM084275_1_312853.1, CM084267_1_2081904.0, 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CM084265_1_65268038.0, CM084264_1_66522465.1, CM084275_1_328861.1, CM084265_1_72926026.1, CM084279_1_1064862.1, CM084274_1_4863996.0, CM084279_1_32640564.1, CM084274_1_4795112.1, CM084269_1_43525214.1",30,"adapter_trim.F1-B21-pH8.bam",0.09,"adapter_trim.F1-B9-pH8.bam",0.13,0.22 +"369","adapter_trim.F2-J227-pH7.bam","CM084269_1_1567129.0, CM084272_1_43331300.1, CM084272_1_1144109.1, CM084268_1_50321875.0, CM084277_1_6198930.1, CM084274_1_4709089.0, CM084266_1_57841523.0, CM084268_1_3703420.0, CM084265_1_71925452.0, CM084269_1_15798357.0, CM084272_1_26336261.1, CM084275_1_23096151.0, CM084268_1_28845823.1, CM084266_1_64723817.1, CM084271_1_44104310.1, CM084269_1_45238132.0, CM084278_1_20630020.0, CM084264_1_70210132.0, CM084279_1_992716.0, CM084265_1_61648596.1, CM084266_1_68478650.0, CM084265_1_65268038.0, CM084264_1_66522465.1, CM084275_1_328861.1, CM084265_1_72926026.1, CM084279_1_1064862.1, CM084274_1_4863996.0, CM084279_1_32640564.1, CM084274_1_4795112.1, 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CM084278_1_20858397.1, CM084264_1_75278291.0, CM084266_1_1233079.1, CM084265_1_65268038.0, CM084271_1_19655228.1, CM084271_1_3822736.0, CM084278_1_22657612.0, CM084274_1_42859637.0, CM084265_1_71820726.0, CM084266_1_70400233.0, CM084277_1_18535878.0, CM084267_1_2910818.1, CM084274_1_4792256.1, CM084272_1_18191577.0, CM084269_1_40338578.1, CM084265_1_72091635.1, CM084279_1_31073085.1, CM084279_1_32640625.0, CM084272_1_1596808.1, CM084274_1_4862958.1, CM084270_1_32126728.1, CM084276_1_20157067.0, CM084264_1_72075476.0, CM084264_1_15064482.0, CM084275_1_38169337.1, CM084266_1_68643487.0, CM084265_1_64735174.0",30,"adapter_trim.F1-B15-pH8.bam",-0.26,"adapter_trim.F1-B10-pH8.bam",-0.41,0.67 +"372","adapter_trim.F2-J201-pH7.bam","CM084271_1_44086139.0, CM084264_1_8098035.0, CM084269_1_1567133.0, CM084278_1_20858397.1, CM084264_1_75278291.0, CM084266_1_1233079.1, CM084265_1_65268038.0, CM084271_1_19655228.1, CM084271_1_3822736.0, CM084278_1_22657612.0, CM084274_1_42859637.0, CM084265_1_71820726.0, CM084266_1_70400233.0, CM084277_1_18535878.0, CM084267_1_2910818.1, CM084274_1_4792256.1, CM084272_1_18191577.0, CM084269_1_40338578.1, CM084265_1_72091635.1, CM084279_1_31073085.1, CM084279_1_32640625.0, CM084272_1_1596808.1, CM084274_1_4862958.1, CM084270_1_32126728.1, CM084276_1_20157067.0, CM084264_1_72075476.0, CM084264_1_15064482.0, CM084275_1_38169337.1, CM084266_1_68643487.0, CM084265_1_64735174.0",30,"adapter_trim.F1-B21-pH8.bam",-0.14,"adapter_trim.F1-B9-pH8.bam",-0.32,0.46 +"373","adapter_trim.F2-J223-pH7.bam","CM084271_1_44086139.0, CM084264_1_8098035.0, CM084269_1_1567133.0, CM084278_1_20858397.1, CM084264_1_75278291.0, CM084266_1_1233079.1, CM084265_1_65268038.0, CM084271_1_19655228.1, CM084271_1_3822736.0, CM084278_1_22657612.0, CM084274_1_42859637.0, CM084265_1_71820726.0, CM084266_1_70400233.0, CM084277_1_18535878.0, CM084267_1_2910818.1, CM084274_1_4792256.1, CM084272_1_18191577.0, CM084269_1_40338578.1, CM084265_1_72091635.1, CM084279_1_31073085.1, CM084279_1_32640625.0, CM084272_1_1596808.1, CM084274_1_4862958.1, CM084270_1_32126728.1, CM084276_1_20157067.0, CM084264_1_72075476.0, CM084264_1_15064482.0, CM084275_1_38169337.1, CM084266_1_68643487.0, CM084265_1_64735174.0",30,"adapter_trim.F1-B25-pH8.bam",-0.65,"adapter_trim.F1-B10-pH8.bam",-0.31,0.96 +"374","adapter_trim.F2-B12-pH7.bam","CM084271_1_44086139.0, CM084264_1_8098035.0, CM084269_1_1567133.0, CM084278_1_20858397.1, CM084264_1_75278291.0, CM084266_1_1233079.1, CM084265_1_65268038.0, CM084271_1_19655228.1, CM084271_1_3822736.0, CM084278_1_22657612.0, CM084274_1_42859637.0, CM084265_1_71820726.0, CM084266_1_70400233.0, CM084277_1_18535878.0, CM084267_1_2910818.1, CM084274_1_4792256.1, CM084272_1_18191577.0, CM084269_1_40338578.1, CM084265_1_72091635.1, CM084279_1_31073085.1, CM084279_1_32640625.0, CM084272_1_1596808.1, CM084274_1_4862958.1, CM084270_1_32126728.1, CM084276_1_20157067.0, CM084264_1_72075476.0, CM084264_1_15064482.0, 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CM084265_1_61648602.1, CM084273_1_31862197.1, CM084265_1_72071409.0, CM084269_1_15813374.0, CM084275_1_8878509.0, CM084274_1_4869977.1, CM084279_1_10151202.0, CM084265_1_70609247.0, CM084274_1_4863048.1, CM084264_1_73931084.1, CM084274_1_4732023.0, CM084270_1_8242343.0, CM084265_1_1062161.0, CM084265_1_71796309.0",30,"adapter_trim.F1-B20-pH8.bam",-0.12,"adapter_trim.F1-B3-pH8.bam",-0.17,0.29 +"379","adapter_trim.F2-J204-pH7.bam","CM084274_1_4700811.1, CM084279_1_32640578.0, CM084275_1_39774900.1, CM084266_1_69052082.0, CM084266_1_57882606.1, CM084269_1_46689548.1, CM084278_1_29698402.1, CM084274_1_4734036.1, CM084276_1_714435.1, CM084266_1_69625503.0, CM084276_1_4238176.0, CM084268_1_50792945.0, CM084267_1_8118616.1, CM084272_1_33597669.0, CM084271_1_256611.0, CM084272_1_33452069.1, CM084279_1_1060874.0, CM084271_1_1034868.1, CM084275_1_20000943.1, CM084279_1_1070294.0, CM084266_1_58087775.0, CM084272_1_44059306.0, CM084266_1_69063996.0, CM084278_1_22644747.0, CM084265_1_73061238.1, 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CM084265_1_71265301.0, CM084271_1_3805850.0, CM084265_1_70977429.0, CM084265_1_58531646.1, CM084266_1_69793914.0, CM084275_1_39420927.0",30,"adapter_trim.F1-B25-pH8.bam",-0.27,"adapter_trim.F1-B1-pH8.bam",-0.27,0.54 +"390","adapter_trim.F2-B7-pH7.bam","CM084278_1_31960704.1, CM084265_1_64736906.1, CM084279_1_32644251.0, CM084274_1_4734039.0, CM084268_1_42211.0, CM084276_1_38559639.1, CM084269_1_1567834.0, CM084277_1_31027263.0, CM084265_1_71796309.1, CM084274_1_4869968.1, CM084264_1_34294033.0, CM084265_1_68072879.0, CM084269_1_12905592.0, CM084268_1_50693767.0, CM084276_1_38797641.1, CM084278_1_23541019.1, CM084271_1_43338888.0, CM084274_1_4773492.1, CM084274_1_4727151.0, CM084272_1_33503418.1, CM084270_1_47077595.0, CM084275_1_25393416.0, CM084266_1_58087776.1, CM084269_1_40338578.1, CM084265_1_71265301.0, CM084271_1_3805850.0, CM084265_1_70977429.0, CM084265_1_58531646.1, CM084266_1_69793914.0, 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CM084267_1_832159.0, CM084267_1_727876.1, CM084265_1_72368293.0, CM084264_1_65424.1, CM084267_1_5165671.0, CM084265_1_72368258.0, CM084266_1_68519869.1, CM084270_1_47076316.0, CM084267_1_700114.0, CM084265_1_70979980.0, CM084270_1_8242350.0, CM084265_1_72636296.0, CM084266_1_69806294.1, CM084277_1_30629891.1, CM084270_1_19464668.0, CM084272_1_43469487.1, CM084279_1_32640622.1, CM084264_1_69534058.0, CM084267_1_6418351.0, CM084266_1_70396245.0, CM084275_1_36059374.0, CM084275_1_39502406.1, CM084268_1_28855794.1, CM084279_1_32652116.1, CM084269_1_46733079.0, CM084278_1_20625152.0, CM084264_1_70171655.0",30,"adapter_trim.F1-B20-pH8.bam",-0.02,"adapter_trim.F1-B3-pH8.bam",-0.23,0.25 +"398","adapter_trim.F2-J184-pH7.bam","CM084276_1_37355346.0, CM084273_1_7839210.0, CM084266_1_66377784.1, CM084275_1_23096151.1, CM084266_1_71319410.0, CM084274_1_4863936.1, CM084266_1_69806294.0, CM084277_1_29780093.1, CM084266_1_38532344.1, CM084269_1_35627205.1, CM084269_1_42862718.0, CM084271_1_44075863.1, CM084269_1_15799403.1, CM084268_1_47694452.1, CM084269_1_15823421.0, CM084271_1_44086152.1, CM084265_1_59221281.1, CM084266_1_69632417.1, CM084266_1_68884692.1, CM084275_1_29098655.1, CM084266_1_57886153.1, CM084278_1_4074299.0, CM084265_1_70607188.1, CM084266_1_65576820.1, CM084265_1_59221275.0, CM084277_1_18535852.1, CM084266_1_68661534.0, CM084265_1_64527991.1, CM084266_1_70707506.0, CM084276_1_25809541.1",30,"adapter_trim.F1-B25-pH8.bam",-0.23,"adapter_trim.F1-B10-pH8.bam",-0.37,0.6 +"399","adapter_trim.F2-J189-pH7.bam","CM084276_1_37355346.0, CM084273_1_7839210.0, CM084266_1_66377784.1, CM084275_1_23096151.1, CM084266_1_71319410.0, CM084274_1_4863936.1, CM084266_1_69806294.0, CM084277_1_29780093.1, CM084266_1_38532344.1, CM084269_1_35627205.1, CM084269_1_42862718.0, CM084271_1_44075863.1, CM084269_1_15799403.1, CM084268_1_47694452.1, CM084269_1_15823421.0, CM084271_1_44086152.1, CM084265_1_59221281.1, CM084266_1_69632417.1, CM084266_1_68884692.1, CM084275_1_29098655.1, CM084266_1_57886153.1, CM084278_1_4074299.0, CM084265_1_70607188.1, CM084266_1_65576820.1, CM084265_1_59221275.0, CM084277_1_18535852.1, CM084266_1_68661534.0, CM084265_1_64527991.1, CM084266_1_70707506.0, CM084276_1_25809541.1",30,"adapter_trim.F1-B8-pH8.bam",0.2,"adapter_trim.F1-B7-pH8.bam",0.21,0.41 +"400","adapter_trim.F2-J204-pH7.bam","CM084276_1_37355346.0, CM084273_1_7839210.0, CM084266_1_66377784.1, CM084275_1_23096151.1, CM084266_1_71319410.0, CM084274_1_4863936.1, CM084266_1_69806294.0, CM084277_1_29780093.1, CM084266_1_38532344.1, CM084269_1_35627205.1, CM084269_1_42862718.0, CM084271_1_44075863.1, CM084269_1_15799403.1, CM084268_1_47694452.1, CM084269_1_15823421.0, CM084271_1_44086152.1, CM084265_1_59221281.1, CM084266_1_69632417.1, CM084266_1_68884692.1, CM084275_1_29098655.1, CM084266_1_57886153.1, CM084278_1_4074299.0, CM084265_1_70607188.1, CM084266_1_65576820.1, CM084265_1_59221275.0, CM084277_1_18535852.1, CM084266_1_68661534.0, CM084265_1_64527991.1, CM084266_1_70707506.0, CM084276_1_25809541.1",30,"adapter_trim.F1-B25-pH8.bam",0.02,"adapter_trim.F1-B1-pH8.bam",-0.2,0.22 +"401","adapter_trim.F2-J225-pH7.bam","CM084276_1_37355346.0, CM084273_1_7839210.0, CM084266_1_66377784.1, CM084275_1_23096151.1, CM084266_1_71319410.0, CM084274_1_4863936.1, CM084266_1_69806294.0, CM084277_1_29780093.1, CM084266_1_38532344.1, CM084269_1_35627205.1, CM084269_1_42862718.0, CM084271_1_44075863.1, CM084269_1_15799403.1, CM084268_1_47694452.1, CM084269_1_15823421.0, CM084271_1_44086152.1, CM084265_1_59221281.1, CM084266_1_69632417.1, CM084266_1_68884692.1, CM084275_1_29098655.1, CM084266_1_57886153.1, CM084278_1_4074299.0, CM084265_1_70607188.1, CM084266_1_65576820.1, CM084265_1_59221275.0, CM084277_1_18535852.1, CM084266_1_68661534.0, CM084265_1_64527991.1, CM084266_1_70707506.0, CM084276_1_25809541.1",30,"adapter_trim.F1-B15-pH8.bam",-0.14,"adapter_trim.F1-B1-pH8.bam",-0.29,0.43 +"402","adapter_trim.F2-J186-pH7.bam","CM084265_1_64196884.0, CM084266_1_68643450.1, CM084272_1_1584317.0, CM084278_1_23541026.1, CM084267_1_2081902.0, CM084269_1_43524472.1, CM084272_1_1307854.1, CM084279_1_1072342.1, CM084276_1_20157325.0, CM084266_1_57882581.0, CM084274_1_4694239.1, CM084265_1_65233014.1, CM084278_1_20732803.1, CM084275_1_25393263.1, CM084275_1_35720346.1, CM084272_1_18553651.1, CM084265_1_64733395.0, CM084264_1_72075461.0, CM084264_1_74266331.0, CM084278_1_4074392.1, CM084264_1_26771545.1, CM084271_1_43817223.1, CM084279_1_10149596.0, CM084269_1_45238238.0, CM084274_1_4863902.1, CM084270_1_4920911.0, CM084268_1_3691704.1, CM084274_1_4789233.0, CM084272_1_43469575.0, CM084264_1_34300890.0",30,"adapter_trim.F1-B21-pH8.bam",0,"adapter_trim.F1-B3-pH8.bam",-0.24,0.24 +"403","adapter_trim.F2-J224-pH7.bam","CM084269_1_12905566.0, CM084275_1_38169337.0, CM084270_1_47077551.0, CM084277_1_29780093.0, CM084266_1_58093839.1, CM084264_1_70182851.1, CM084271_1_44228071.1, CM084270_1_8244653.1, CM084276_1_38539342.1, CM084271_1_1033926.1, CM084279_1_32640564.1, CM084278_1_279490.1, CM084267_1_13229742.0, CM084264_1_65408.1, CM084268_1_50216526.1, CM084278_1_4074395.0, CM084276_1_38797641.0, CM084269_1_15827890.1, CM084266_1_67097921.0, CM084270_1_9401006.0, CM084264_1_73926177.0, CM084264_1_74191504.1, CM084268_1_50790925.0, CM084264_1_69902963.1, CM084264_1_70466147.0, CM084268_1_22932625.0, CM084264_1_2737868.1, CM084278_1_22654264.1, CM084272_1_1894337.0, CM084276_1_1856888.1",30,"adapter_trim.F1-B20-pH8.bam",-0.04,"adapter_trim.F1-B4-pH8.bam",-0.09,0.13 +"404","adapter_trim.F2-J187-pH7.bam","CM084269_1_42862779.0, CM084269_1_15828545.0, CM084273_1_31865208.1, CM084264_1_71816897.1, CM084267_1_52092638.0, CM084266_1_69051090.0, CM084269_1_15813148.1, CM084264_1_72929492.1, CM084266_1_69545761.1, CM084279_1_1196450.0, CM084276_1_12392692.1, CM084271_1_44104716.1, CM084275_1_39338236.1, CM084265_1_72178237.0, CM084265_1_64736906.1, CM084271_1_3821161.0, CM084267_1_5165677.1, CM084276_1_38775936.0, CM084279_1_32917233.0, CM084279_1_10151169.1, CM084272_1_1308683.1, CM084265_1_72637027.0, CM084274_1_4818355.1, CM084274_1_4792974.0, CM084269_1_39736991.0, CM084279_1_28791311.0, CM084277_1_30631457.1, CM084268_1_9292474.0, CM084265_1_24901859.0, CM084274_1_4708735.0",30,"adapter_trim.F1-B25-pH8.bam",-0.08,"adapter_trim.F1-B5-pH8.bam",-0.29,0.37 +"405","adapter_trim.F2-J221-pH7.bam","CM084266_1_69050667.0, CM084265_1_72368245.0, CM084268_1_45604.1, CM084275_1_327919.0, CM084274_1_6125560.0, CM084277_1_30953057.1, CM084264_1_72117199.1, CM084264_1_73152528.0, CM084266_1_50301553.1, CM084266_1_1233079.1, CM084265_1_8362505.1, CM084266_1_65401967.1, CM084267_1_6420851.1, CM084271_1_43851366.1, CM084265_1_59221213.0, CM084271_1_379052.0, CM084264_1_71189810.0, CM084274_1_4870202.1, CM084274_1_4686932.1, CM084275_1_23095308.1, CM084265_1_68019714.0, CM084264_1_69748575.0, CM084268_1_1326643.1, CM084274_1_4795482.0, CM084269_1_43528677.0, CM084275_1_38169321.0, CM084269_1_4628748.1, CM084267_1_9176045.1, CM084275_1_120808.1, CM084265_1_71831292.1",30,"adapter_trim.F1-B25-pH8.bam",-0.5,"adapter_trim.F1-B7-pH8.bam",-0.65,1.15 +"406","adapter_trim.F2-B25-pH7.bam","CM084266_1_69050667.0, CM084265_1_72368245.0, CM084268_1_45604.1, CM084275_1_327919.0, CM084274_1_6125560.0, CM084277_1_30953057.1, CM084264_1_72117199.1, CM084264_1_73152528.0, CM084266_1_50301553.1, CM084266_1_1233079.1, CM084265_1_8362505.1, CM084266_1_65401967.1, CM084267_1_6420851.1, CM084271_1_43851366.1, CM084265_1_59221213.0, CM084271_1_379052.0, CM084264_1_71189810.0, CM084274_1_4870202.1, CM084274_1_4686932.1, CM084275_1_23095308.1, CM084265_1_68019714.0, CM084264_1_69748575.0, CM084268_1_1326643.1, CM084274_1_4795482.0, CM084269_1_43528677.0, CM084275_1_38169321.0, CM084269_1_4628748.1, CM084267_1_9176045.1, CM084275_1_120808.1, CM084265_1_71831292.1",30,"adapter_trim.F1-B15-pH8.bam",-0.45,"adapter_trim.F1-B4-pH8.bam",-0.11,0.56 +"407","adapter_trim.F2-J166-pH7.bam","CM084275_1_661848.0, CM084270_1_1559641.0, CM084266_1_58102684.1, CM084269_1_46688879.1, CM084273_1_214008.1, CM084274_1_4066885.0, CM084279_1_32673936.0, CM084268_1_18519471.0, CM084269_1_15799397.1, CM084271_1_11500058.0, CM084273_1_32683023.0, CM084270_1_26884058.1, CM084265_1_71797896.1, CM084279_1_1079183.0, CM084271_1_1033937.1, CM084271_1_3814148.0, CM084275_1_1304747.1, CM084266_1_65571765.0, CM084267_1_51241061.0, CM084272_1_33589893.1, CM084278_1_16767343.0, CM084265_1_60316158.0, CM084276_1_38271843.0, CM084269_1_15809963.1, CM084268_1_46422.1, CM084267_1_9175847.0, CM084275_1_40706319.0, CM084268_1_42863.0, CM084264_1_70466152.0, CM084272_1_23578669.0",30,"adapter_trim.F1-B8-pH8.bam",-0.25,"adapter_trim.F1-B9-pH8.bam",-0.26,0.51 +"408","adapter_trim.F2-J201-pH7.bam","CM084275_1_661848.0, CM084270_1_1559641.0, CM084266_1_58102684.1, CM084269_1_46688879.1, CM084273_1_214008.1, CM084274_1_4066885.0, CM084279_1_32673936.0, CM084268_1_18519471.0, CM084269_1_15799397.1, CM084271_1_11500058.0, CM084273_1_32683023.0, CM084270_1_26884058.1, CM084265_1_71797896.1, CM084279_1_1079183.0, CM084271_1_1033937.1, CM084271_1_3814148.0, CM084275_1_1304747.1, CM084266_1_65571765.0, CM084267_1_51241061.0, CM084272_1_33589893.1, CM084278_1_16767343.0, CM084265_1_60316158.0, CM084276_1_38271843.0, CM084269_1_15809963.1, CM084268_1_46422.1, CM084267_1_9175847.0, CM084275_1_40706319.0, CM084268_1_42863.0, CM084264_1_70466152.0, CM084272_1_23578669.0",30,"adapter_trim.F1-B20-pH8.bam",0.03,"adapter_trim.F1-B9-pH8.bam",0.36,0.39 +"409","adapter_trim.F2-J221-pH7.bam","CM084275_1_661848.0, CM084270_1_1559641.0, CM084266_1_58102684.1, CM084269_1_46688879.1, CM084273_1_214008.1, CM084274_1_4066885.0, CM084279_1_32673936.0, CM084268_1_18519471.0, CM084269_1_15799397.1, CM084271_1_11500058.0, CM084273_1_32683023.0, CM084270_1_26884058.1, CM084265_1_71797896.1, CM084279_1_1079183.0, CM084271_1_1033937.1, CM084271_1_3814148.0, CM084275_1_1304747.1, CM084266_1_65571765.0, CM084267_1_51241061.0, CM084272_1_33589893.1, CM084278_1_16767343.0, CM084265_1_60316158.0, CM084276_1_38271843.0, CM084269_1_15809963.1, CM084268_1_46422.1, CM084267_1_9175847.0, CM084275_1_40706319.0, CM084268_1_42863.0, CM084264_1_70466152.0, CM084272_1_23578669.0",30,"adapter_trim.F1-B8-pH8.bam",-0.1,"adapter_trim.F1-B7-pH8.bam",-0.08,0.18 +"410","adapter_trim.F2-J164-pH7.bam","CM084270_1_4921029.0, CM084278_1_23542543.1, CM084276_1_1856066.1, CM084271_1_43851366.1, CM084266_1_62460085.1, CM084266_1_64723817.0, CM084279_1_10151202.1, CM084277_1_31027263.0, CM084264_1_72054052.1, CM084268_1_42009.0, CM084264_1_72117194.0, CM084271_1_44075859.0, CM084274_1_4694494.1, CM084279_1_10147315.1, CM084274_1_3692509.0, CM084276_1_38775924.0, CM084268_1_1326519.0, CM084268_1_49721957.1, CM084264_1_8099092.0, CM084269_1_1558064.1, CM084265_1_14403532.0, CM084266_1_68659587.0, CM084276_1_2841302.0, CM084269_1_40438751.1, CM084274_1_4709089.1, CM084275_1_29098881.0, CM084264_1_74266331.1, CM084266_1_68478650.0, CM084264_1_70182852.0, CM084278_1_20734376.1",30,"adapter_trim.F1-B20-pH8.bam",0.02,"adapter_trim.F1-B7-pH8.bam",0,0.02 +"411","adapter_trim.F2-J201-pH7.bam","CM084270_1_4921029.0, CM084278_1_23542543.1, CM084276_1_1856066.1, CM084271_1_43851366.1, CM084266_1_62460085.1, CM084266_1_64723817.0, CM084279_1_10151202.1, CM084277_1_31027263.0, CM084264_1_72054052.1, CM084268_1_42009.0, CM084264_1_72117194.0, CM084271_1_44075859.0, CM084274_1_4694494.1, CM084279_1_10147315.1, CM084274_1_3692509.0, CM084276_1_38775924.0, CM084268_1_1326519.0, CM084268_1_49721957.1, CM084264_1_8099092.0, CM084269_1_1558064.1, CM084265_1_14403532.0, CM084266_1_68659587.0, CM084276_1_2841302.0, CM084269_1_40438751.1, CM084274_1_4709089.1, CM084275_1_29098881.0, CM084264_1_74266331.1, CM084266_1_68478650.0, CM084264_1_70182852.0, CM084278_1_20734376.1",30,"adapter_trim.F1-B25-pH8.bam",-0.14,"adapter_trim.F1-B9-pH8.bam",-0.33,0.47 +"412","adapter_trim.F2-J204-pH7.bam","CM084270_1_4921029.0, CM084278_1_23542543.1, CM084276_1_1856066.1, CM084271_1_43851366.1, CM084266_1_62460085.1, CM084266_1_64723817.0, CM084279_1_10151202.1, CM084277_1_31027263.0, CM084264_1_72054052.1, CM084268_1_42009.0, CM084264_1_72117194.0, CM084271_1_44075859.0, CM084274_1_4694494.1, CM084279_1_10147315.1, CM084274_1_3692509.0, CM084276_1_38775924.0, CM084268_1_1326519.0, CM084268_1_49721957.1, CM084264_1_8099092.0, CM084269_1_1558064.1, CM084265_1_14403532.0, CM084266_1_68659587.0, CM084276_1_2841302.0, CM084269_1_40438751.1, CM084274_1_4709089.1, CM084275_1_29098881.0, CM084264_1_74266331.1, CM084266_1_68478650.0, CM084264_1_70182852.0, CM084278_1_20734376.1",30,"adapter_trim.F1-B8-pH8.bam",0.15,"adapter_trim.F1-B4-pH8.bam",-0.13,0.28 +"413","adapter_trim.F2-J162-pH7.bam","CM084269_1_43525189.0, CM084265_1_72071374.0, CM084265_1_71826461.1, CM084274_1_4778747.0, CM084271_1_11500058.1, CM084279_1_1070298.0, CM084267_1_6420929.0, CM084268_1_1508040.1, CM084264_1_64269859.1, CM084272_1_1891434.0, CM084272_1_33616443.0, CM084278_1_20734519.0, CM084275_1_126552.0, CM084276_1_25532347.0, CM084265_1_73060810.1, CM084267_1_6421555.0, CM084279_1_32915269.1, CM084266_1_70396060.1, CM084270_1_8444534.0, CM084265_1_68525973.1, CM084275_1_400276.1, CM084266_1_68320536.1, CM084276_1_2855903.0, CM084273_1_42294202.0, CM084266_1_69547380.1, CM084276_1_1856630.0, CM084274_1_4868380.0, CM084265_1_72178250.0, CM084270_1_42348999.1, CM084268_1_9292527.0",30,"adapter_trim.F1-B20-pH8.bam",0.04,"adapter_trim.F1-B11-pH8.bam",-0.06,0.1 +"414","adapter_trim.F2-J166-pH7.bam","CM084269_1_43525189.0, CM084265_1_72071374.0, CM084265_1_71826461.1, CM084274_1_4778747.0, CM084271_1_11500058.1, CM084279_1_1070298.0, CM084267_1_6420929.0, CM084268_1_1508040.1, CM084264_1_64269859.1, CM084272_1_1891434.0, CM084272_1_33616443.0, CM084278_1_20734519.0, CM084275_1_126552.0, CM084276_1_25532347.0, CM084265_1_73060810.1, CM084267_1_6421555.0, CM084279_1_32915269.1, CM084266_1_70396060.1, CM084270_1_8444534.0, CM084265_1_68525973.1, CM084275_1_400276.1, CM084266_1_68320536.1, CM084276_1_2855903.0, CM084273_1_42294202.0, CM084266_1_69547380.1, CM084276_1_1856630.0, CM084274_1_4868380.0, CM084265_1_72178250.0, CM084270_1_42348999.1, CM084268_1_9292527.0",30,"adapter_trim.F1-B15-pH8.bam",-0.17,"adapter_trim.F1-B3-pH8.bam",-0.02,0.19 +"415","adapter_trim.F2-B7-pH7.bam","CM084269_1_43525189.0, CM084265_1_72071374.0, CM084265_1_71826461.1, CM084274_1_4778747.0, CM084271_1_11500058.1, CM084279_1_1070298.0, CM084267_1_6420929.0, CM084268_1_1508040.1, CM084264_1_64269859.1, CM084272_1_1891434.0, CM084272_1_33616443.0, CM084278_1_20734519.0, CM084275_1_126552.0, CM084276_1_25532347.0, CM084265_1_73060810.1, CM084267_1_6421555.0, CM084279_1_32915269.1, CM084266_1_70396060.1, CM084270_1_8444534.0, CM084265_1_68525973.1, CM084275_1_400276.1, CM084266_1_68320536.1, CM084276_1_2855903.0, CM084273_1_42294202.0, CM084266_1_69547380.1, CM084276_1_1856630.0, CM084274_1_4868380.0, CM084265_1_72178250.0, CM084270_1_42348999.1, CM084268_1_9292527.0",30,"adapter_trim.F1-B15-pH8.bam",-0.49,"adapter_trim.F1-B10-pH8.bam",-0.16,0.65 +"416","adapter_trim.F2-J186-pH7.bam","CM084265_1_71265301.0, CM084274_1_4788621.0, CM084268_1_9292468.1, CM084266_1_70707506.1, CM084274_1_4696973.0, CM084265_1_71899669.1, CM084265_1_64586071.0, CM084264_1_70182851.1, CM084275_1_38169332.1, CM084266_1_62460085.1, CM084264_1_34301630.1, CM084273_1_268153.0, CM084271_1_43868179.1, CM084267_1_51366722.0, CM084265_1_71796309.0, CM084265_1_71265241.0, CM084264_1_70173624.1, CM084275_1_400249.0, CM084266_1_68659869.1, CM084269_1_15823954.0, CM084272_1_43469486.1, CM084267_1_2163720.1, CM084275_1_29098881.1, CM084264_1_8233152.0, CM084271_1_7137729.0, CM084268_1_18519471.1, CM084274_1_11694583.1, CM084264_1_71189810.1, CM084266_1_57889092.1, CM084264_1_74273479.0",30,"adapter_trim.F1-B15-pH8.bam",-0.16,"adapter_trim.F1-B4-pH8.bam",-0.2,0.36 +"417","adapter_trim.F2-J187-pH7.bam","CM084265_1_71265301.0, CM084274_1_4788621.0, CM084268_1_9292468.1, CM084266_1_70707506.1, CM084274_1_4696973.0, CM084265_1_71899669.1, CM084265_1_64586071.0, CM084264_1_70182851.1, CM084275_1_38169332.1, CM084266_1_62460085.1, CM084264_1_34301630.1, CM084273_1_268153.0, CM084271_1_43868179.1, CM084267_1_51366722.0, CM084265_1_71796309.0, CM084265_1_71265241.0, CM084264_1_70173624.1, CM084275_1_400249.0, CM084266_1_68659869.1, CM084269_1_15823954.0, CM084272_1_43469486.1, CM084267_1_2163720.1, CM084275_1_29098881.1, CM084264_1_8233152.0, CM084271_1_7137729.0, CM084268_1_18519471.1, CM084274_1_11694583.1, CM084264_1_71189810.1, CM084266_1_57889092.1, CM084264_1_74273479.0",30,"adapter_trim.F1-B8-pH8.bam",-0.23,"adapter_trim.F1-B10-pH8.bam",-0.48,0.71 +"418","adapter_trim.F2-J203-pH7.bam","CM084265_1_71265301.0, CM084274_1_4788621.0, CM084268_1_9292468.1, CM084266_1_70707506.1, CM084274_1_4696973.0, CM084265_1_71899669.1, CM084265_1_64586071.0, CM084264_1_70182851.1, CM084275_1_38169332.1, CM084266_1_62460085.1, CM084264_1_34301630.1, CM084273_1_268153.0, CM084271_1_43868179.1, CM084267_1_51366722.0, CM084265_1_71796309.0, CM084265_1_71265241.0, CM084264_1_70173624.1, CM084275_1_400249.0, CM084266_1_68659869.1, CM084269_1_15823954.0, CM084272_1_43469486.1, CM084267_1_2163720.1, CM084275_1_29098881.1, CM084264_1_8233152.0, CM084271_1_7137729.0, CM084268_1_18519471.1, CM084274_1_11694583.1, CM084264_1_71189810.1, CM084266_1_57889092.1, CM084264_1_74273479.0",30,"adapter_trim.F1-B8-pH8.bam",-0.21,"adapter_trim.F1-B5-pH8.bam",-0.23,0.44 +"419","adapter_trim.F2-J227-pH7.bam","CM084265_1_71265301.0, CM084274_1_4788621.0, CM084268_1_9292468.1, CM084266_1_70707506.1, CM084274_1_4696973.0, CM084265_1_71899669.1, CM084265_1_64586071.0, CM084264_1_70182851.1, CM084275_1_38169332.1, CM084266_1_62460085.1, CM084264_1_34301630.1, CM084273_1_268153.0, CM084271_1_43868179.1, CM084267_1_51366722.0, CM084265_1_71796309.0, CM084265_1_71265241.0, CM084264_1_70173624.1, CM084275_1_400249.0, CM084266_1_68659869.1, CM084269_1_15823954.0, CM084272_1_43469486.1, CM084267_1_2163720.1, CM084275_1_29098881.1, CM084264_1_8233152.0, CM084271_1_7137729.0, CM084268_1_18519471.1, CM084274_1_11694583.1, CM084264_1_71189810.1, CM084266_1_57889092.1, CM084264_1_74273479.0",30,"adapter_trim.F1-B15-pH8.bam",-0.29,"adapter_trim.F1-B3-pH8.bam",-0.04,0.33 +"420","adapter_trim.F2-B25-pH7.bam","CM084265_1_71265301.0, CM084274_1_4788621.0, CM084268_1_9292468.1, CM084266_1_70707506.1, CM084274_1_4696973.0, CM084265_1_71899669.1, CM084265_1_64586071.0, CM084264_1_70182851.1, CM084275_1_38169332.1, CM084266_1_62460085.1, CM084264_1_34301630.1, CM084273_1_268153.0, CM084271_1_43868179.1, CM084267_1_51366722.0, CM084265_1_71796309.0, CM084265_1_71265241.0, CM084264_1_70173624.1, CM084275_1_400249.0, CM084266_1_68659869.1, CM084269_1_15823954.0, CM084272_1_43469486.1, CM084267_1_2163720.1, CM084275_1_29098881.1, CM084264_1_8233152.0, CM084271_1_7137729.0, CM084268_1_18519471.1, CM084274_1_11694583.1, CM084264_1_71189810.1, CM084266_1_57889092.1, CM084264_1_74273479.0",30,"adapter_trim.F1-B20-pH8.bam",-0.29,"adapter_trim.F1-B7-pH8.bam",-0.38,0.67 +"421","adapter_trim.F2-B2-pH7.bam","CM084265_1_71265301.0, CM084274_1_4788621.0, CM084268_1_9292468.1, CM084266_1_70707506.1, CM084274_1_4696973.0, CM084265_1_71899669.1, CM084265_1_64586071.0, CM084264_1_70182851.1, CM084275_1_38169332.1, CM084266_1_62460085.1, CM084264_1_34301630.1, CM084273_1_268153.0, CM084271_1_43868179.1, CM084267_1_51366722.0, CM084265_1_71796309.0, CM084265_1_71265241.0, CM084264_1_70173624.1, CM084275_1_400249.0, CM084266_1_68659869.1, CM084269_1_15823954.0, CM084272_1_43469486.1, CM084267_1_2163720.1, CM084275_1_29098881.1, CM084264_1_8233152.0, CM084271_1_7137729.0, CM084268_1_18519471.1, CM084274_1_11694583.1, CM084264_1_71189810.1, CM084266_1_57889092.1, CM084264_1_74273479.0",30,"adapter_trim.F1-B21-pH8.bam",-0.33,"adapter_trim.F1-B10-pH8.bam",-0.72,1.05 +"422","adapter_trim.F2-J223-pH7.bam","CM084266_1_68519869.1, CM084268_1_276460.0, CM084274_1_4869977.0, CM084271_1_37240198.1, CM084279_1_32640564.0, CM084266_1_64723799.0, CM084265_1_72079002.0, CM084264_1_68688356.0, CM084272_1_33617974.0, CM084275_1_25393709.1, CM084264_1_72054047.0, CM084274_1_41835817.0, CM084270_1_46590816.1, CM084272_1_33597669.0, CM084265_1_24898691.1, CM084272_1_11675308.0, CM084266_1_71149029.0, CM084266_1_64726670.0, CM084276_1_4238114.0, CM084264_1_66525866.1, CM084277_1_30623529.0, CM084272_1_18194129.0, CM084269_1_1567133.0, CM084268_1_298786.0, CM084270_1_32126724.0, CM084265_1_64784804.1, CM084273_1_32683002.1, CM084279_1_32665186.0, CM084265_1_73061223.1, CM084265_1_64586069.1",30,"adapter_trim.F1-B8-pH8.bam",-0.12,"adapter_trim.F1-B7-pH8.bam",-0.19,0.31 +"423","adapter_trim.F2-B10-pH7.bam","CM084266_1_68519869.1, CM084268_1_276460.0, CM084274_1_4869977.0, CM084271_1_37240198.1, CM084279_1_32640564.0, CM084266_1_64723799.0, CM084265_1_72079002.0, CM084264_1_68688356.0, CM084272_1_33617974.0, CM084275_1_25393709.1, CM084264_1_72054047.0, CM084274_1_41835817.0, CM084270_1_46590816.1, CM084272_1_33597669.0, CM084265_1_24898691.1, CM084272_1_11675308.0, CM084266_1_71149029.0, CM084266_1_64726670.0, CM084276_1_4238114.0, CM084264_1_66525866.1, CM084277_1_30623529.0, CM084272_1_18194129.0, CM084269_1_1567133.0, CM084268_1_298786.0, CM084270_1_32126724.0, CM084265_1_64784804.1, CM084273_1_32683002.1, CM084279_1_32665186.0, CM084265_1_73061223.1, CM084265_1_64586069.1",30,"adapter_trim.F1-B15-pH8.bam",-0.26,"adapter_trim.F1-B5-pH8.bam",-0.14,0.4 +"424","adapter_trim.F2-B7-pH7.bam","CM084279_1_33759516.0, CM084264_1_70174612.1, CM084269_1_15826462.0, CM084269_1_4636406.0, CM084278_1_4074311.0, CM084265_1_64832883.0, CM084269_1_43524104.0, CM084276_1_38772790.1, CM084270_1_47077479.1, CM084264_1_69271981.1, CM084266_1_57882616.0, CM084266_1_50301523.1, CM084264_1_73309412.0, CM084270_1_32126102.1, CM084264_1_69870962.0, CM084278_1_16774023.0, CM084279_1_32648014.1, CM084278_1_5144752.1, CM084266_1_69632417.1, CM084268_1_49719639.0, CM084267_1_8118654.1, CM084264_1_74800265.0, CM084266_1_65576813.0, CM084276_1_7202888.1, CM084268_1_42745.0, CM084277_1_6198970.1, CM084278_1_20732803.0, CM084274_1_4708745.1, CM084268_1_4026799.1, CM084272_1_1584317.0",30,"adapter_trim.F1-B15-pH8.bam",0.04,"adapter_trim.F1-B5-pH8.bam",0.01,0.05 +"425","adapter_trim.F2-J164-pH7.bam","CM084264_1_12084160.1, CM084276_1_1849333.1, CM084275_1_35722060.1, CM084277_1_1858867.1, CM084275_1_524647.0, CM084265_1_73060663.1, CM084271_1_44104716.1, CM084264_1_8098050.1, CM084271_1_44073407.0, CM084264_1_8098050.0, CM084269_1_15827788.1, CM084267_1_591197.1, CM084264_1_34297313.0, CM084266_1_69052185.0, CM084264_1_12084160.0, CM084273_1_31862649.1, CM084271_1_3819803.1, CM084266_1_66383611.0, CM084274_1_6125560.1, CM084271_1_44077330.1, CM084279_1_1073381.0, CM084272_1_1894340.1, CM084277_1_18546601.0, CM084271_1_290137.0, CM084279_1_1073128.1, CM084264_1_72912659.1, CM084266_1_23411289.1, CM084278_1_19960942.0, CM084274_1_42859664.1, CM084269_1_47265482.0",30,"adapter_trim.F1-B8-pH8.bam",-0.11,"adapter_trim.F1-B3-pH8.bam",-0.12,0.23 +"426","adapter_trim.F2-J187-pH7.bam","CM084264_1_12084160.1, CM084276_1_1849333.1, CM084275_1_35722060.1, CM084277_1_1858867.1, CM084275_1_524647.0, CM084265_1_73060663.1, CM084271_1_44104716.1, CM084264_1_8098050.1, CM084271_1_44073407.0, CM084264_1_8098050.0, CM084269_1_15827788.1, CM084267_1_591197.1, CM084264_1_34297313.0, CM084266_1_69052185.0, CM084264_1_12084160.0, CM084273_1_31862649.1, CM084271_1_3819803.1, CM084266_1_66383611.0, CM084274_1_6125560.1, CM084271_1_44077330.1, CM084279_1_1073381.0, CM084272_1_1894340.1, CM084277_1_18546601.0, CM084271_1_290137.0, CM084279_1_1073128.1, CM084264_1_72912659.1, CM084266_1_23411289.1, CM084278_1_19960942.0, CM084274_1_42859664.1, CM084269_1_47265482.0",30,"adapter_trim.F1-B20-pH8.bam",-0.16,"adapter_trim.F1-B9-pH8.bam",-0.39,0.55 +"427","adapter_trim.F2-J225-pH7.bam","CM084264_1_12084160.1, CM084276_1_1849333.1, CM084275_1_35722060.1, CM084277_1_1858867.1, CM084275_1_524647.0, CM084265_1_73060663.1, CM084271_1_44104716.1, CM084264_1_8098050.1, CM084271_1_44073407.0, CM084264_1_8098050.0, CM084269_1_15827788.1, CM084267_1_591197.1, CM084264_1_34297313.0, CM084266_1_69052185.0, CM084264_1_12084160.0, CM084273_1_31862649.1, CM084271_1_3819803.1, CM084266_1_66383611.0, CM084274_1_6125560.1, CM084271_1_44077330.1, CM084279_1_1073381.0, CM084272_1_1894340.1, CM084277_1_18546601.0, CM084271_1_290137.0, CM084279_1_1073128.1, CM084264_1_72912659.1, CM084266_1_23411289.1, CM084278_1_19960942.0, CM084274_1_42859664.1, CM084269_1_47265482.0",30,"adapter_trim.F1-B15-pH8.bam",-0.41,"adapter_trim.F1-B10-pH8.bam",-0.37,0.78 +"428","adapter_trim.F2-J205-pH7.bam","CM084265_1_72990731.1, CM084264_1_69682047.1, CM084267_1_13229742.1, CM084268_1_24031324.0, CM084279_1_10153273.0, CM084279_1_32666409.1, CM084277_1_10628711.0, CM084264_1_34300493.0, CM084274_1_4785921.1, CM084265_1_66141859.0, CM084267_1_727876.0, CM084274_1_42859668.0, CM084266_1_59802398.1, CM084274_1_4863779.0, CM084275_1_39781005.1, CM084278_1_20858390.1, CM084277_1_18546604.1, CM084266_1_71160169.0, CM084264_1_69902963.1, CM084275_1_25393266.1, CM084267_1_52593725.1, CM084266_1_68322173.1, CM084275_1_4345059.0, CM084269_1_35627068.1, CM084267_1_11257262.1, CM084265_1_790976.1, CM084271_1_30532429.0, CM084268_1_3261991.0, CM084270_1_42355508.1, CM084264_1_15064482.0",30,"adapter_trim.F1-B21-pH8.bam",0.03,"adapter_trim.F1-B3-pH8.bam",-0.07,0.1 +"429","adapter_trim.F2-J223-pH7.bam","CM084265_1_72990731.1, CM084264_1_69682047.1, CM084267_1_13229742.1, CM084268_1_24031324.0, CM084279_1_10153273.0, CM084279_1_32666409.1, CM084277_1_10628711.0, CM084264_1_34300493.0, CM084274_1_4785921.1, CM084265_1_66141859.0, CM084267_1_727876.0, CM084274_1_42859668.0, CM084266_1_59802398.1, CM084274_1_4863779.0, CM084275_1_39781005.1, CM084278_1_20858390.1, CM084277_1_18546604.1, CM084266_1_71160169.0, CM084264_1_69902963.1, CM084275_1_25393266.1, CM084267_1_52593725.1, CM084266_1_68322173.1, CM084275_1_4345059.0, CM084269_1_35627068.1, CM084267_1_11257262.1, CM084265_1_790976.1, CM084271_1_30532429.0, CM084268_1_3261991.0, CM084270_1_42355508.1, CM084264_1_15064482.0",30,"adapter_trim.F1-B20-pH8.bam",-0.5,"adapter_trim.F1-B9-pH8.bam",-0.32,0.82 +"430","adapter_trim.F2-J224-pH7.bam","CM084265_1_72990731.1, CM084264_1_69682047.1, CM084267_1_13229742.1, CM084268_1_24031324.0, CM084279_1_10153273.0, CM084279_1_32666409.1, CM084277_1_10628711.0, CM084264_1_34300493.0, CM084274_1_4785921.1, CM084265_1_66141859.0, CM084267_1_727876.0, CM084274_1_42859668.0, CM084266_1_59802398.1, CM084274_1_4863779.0, CM084275_1_39781005.1, CM084278_1_20858390.1, CM084277_1_18546604.1, CM084266_1_71160169.0, CM084264_1_69902963.1, CM084275_1_25393266.1, CM084267_1_52593725.1, CM084266_1_68322173.1, CM084275_1_4345059.0, CM084269_1_35627068.1, CM084267_1_11257262.1, CM084265_1_790976.1, CM084271_1_30532429.0, CM084268_1_3261991.0, CM084270_1_42355508.1, CM084264_1_15064482.0",30,"adapter_trim.F1-B21-pH8.bam",-0.08,"adapter_trim.F1-B9-pH8.bam",-0.2,0.28 +"431","adapter_trim.F2-J223-pH7.bam","CM084276_1_38960928.0, CM084269_1_1567834.1, CM084267_1_52593725.1, CM084273_1_214007.0, CM084265_1_71463753.0, CM084264_1_70174612.1, CM084277_1_5804275.0, CM084265_1_68806466.0, CM084271_1_1033788.1, CM084265_1_24901885.1, CM084270_1_42355544.1, CM084272_1_33453891.0, CM084274_1_6125439.0, CM084278_1_23541053.1, CM084277_1_5804275.1, CM084265_1_790962.0, CM084269_1_42862797.1, CM084275_1_39420927.0, CM084274_1_42293378.0, CM084264_1_70182851.0, CM084266_1_70396060.0, CM084270_1_8242296.0, CM084268_1_50682932.1, CM084268_1_28845823.1, CM084265_1_1816578.1, CM084268_1_24031324.0, CM084274_1_34977142.1, CM084275_1_39774860.1, CM084275_1_2509950.0, CM084269_1_42862718.0",30,"adapter_trim.F1-B15-pH8.bam",0.06,"adapter_trim.F1-B4-pH8.bam",0.07,0.13 +"432","adapter_trim.F2-J224-pH7.bam","CM084276_1_38960928.0, CM084269_1_1567834.1, CM084267_1_52593725.1, CM084273_1_214007.0, CM084265_1_71463753.0, CM084264_1_70174612.1, CM084277_1_5804275.0, CM084265_1_68806466.0, CM084271_1_1033788.1, CM084265_1_24901885.1, CM084270_1_42355544.1, CM084272_1_33453891.0, CM084274_1_6125439.0, CM084278_1_23541053.1, CM084277_1_5804275.1, CM084265_1_790962.0, CM084269_1_42862797.1, CM084275_1_39420927.0, CM084274_1_42293378.0, CM084264_1_70182851.0, CM084266_1_70396060.0, CM084270_1_8242296.0, CM084268_1_50682932.1, CM084268_1_28845823.1, CM084265_1_1816578.1, CM084268_1_24031324.0, CM084274_1_34977142.1, CM084275_1_39774860.1, CM084275_1_2509950.0, CM084269_1_42862718.0",30,"adapter_trim.F1-B20-pH8.bam",-0.37,"adapter_trim.F1-B3-pH8.bam",-0.24,0.61 +"433","adapter_trim.F2-J225-pH7.bam","CM084276_1_38960928.0, CM084269_1_1567834.1, CM084267_1_52593725.1, CM084273_1_214007.0, CM084265_1_71463753.0, CM084264_1_70174612.1, CM084277_1_5804275.0, CM084265_1_68806466.0, CM084271_1_1033788.1, CM084265_1_24901885.1, CM084270_1_42355544.1, CM084272_1_33453891.0, CM084274_1_6125439.0, CM084278_1_23541053.1, CM084277_1_5804275.1, CM084265_1_790962.0, CM084269_1_42862797.1, CM084275_1_39420927.0, CM084274_1_42293378.0, CM084264_1_70182851.0, CM084266_1_70396060.0, CM084270_1_8242296.0, CM084268_1_50682932.1, CM084268_1_28845823.1, CM084265_1_1816578.1, CM084268_1_24031324.0, CM084274_1_34977142.1, CM084275_1_39774860.1, CM084275_1_2509950.0, CM084269_1_42862718.0",30,"adapter_trim.F1-B21-pH8.bam",-0.37,"adapter_trim.F1-B4-pH8.bam",-0.28,0.65 +"434","adapter_trim.F2-J162-pH7.bam","CM084275_1_319819.1, CM084271_1_44105575.1, CM084275_1_312961.1, CM084271_1_44077319.0, CM084269_1_43525399.0, CM084275_1_25393416.1, CM084276_1_2841296.1, CM084265_1_72368163.0, CM084266_1_65576934.0, CM084274_1_4708043.1, CM084278_1_20695466.1, CM084266_1_816291.1, CM084265_1_71831292.1, CM084268_1_28851913.0, CM084274_1_4671994.1, CM084265_1_72071381.1, CM084265_1_59221309.1, CM084267_1_5881751.1, CM084276_1_38558507.0, CM084269_1_41809353.0, CM084264_1_8233152.0, CM084274_1_4869924.1, CM084275_1_39774927.1, CM084267_1_4505277.0, CM084268_1_50681648.0, CM084264_1_34294397.1, CM084265_1_959800.0, CM084269_1_39737144.0, CM084264_1_68634780.1, CM084266_1_64164269.0",30,"adapter_trim.F1-B21-pH8.bam",-0.18,"adapter_trim.F1-B8-pH8.bam",-0.32,0.5 +"435","adapter_trim.F2-J187-pH7.bam","CM084275_1_319819.1, CM084271_1_44105575.1, CM084275_1_312961.1, CM084271_1_44077319.0, CM084269_1_43525399.0, CM084275_1_25393416.1, CM084276_1_2841296.1, CM084265_1_72368163.0, CM084266_1_65576934.0, CM084274_1_4708043.1, CM084278_1_20695466.1, CM084266_1_816291.1, CM084265_1_71831292.1, CM084268_1_28851913.0, CM084274_1_4671994.1, CM084265_1_72071381.1, CM084265_1_59221309.1, CM084267_1_5881751.1, CM084276_1_38558507.0, CM084269_1_41809353.0, CM084264_1_8233152.0, CM084274_1_4869924.1, CM084275_1_39774927.1, CM084267_1_4505277.0, CM084268_1_50681648.0, CM084264_1_34294397.1, CM084265_1_959800.0, CM084269_1_39737144.0, CM084264_1_68634780.1, CM084266_1_64164269.0",30,"adapter_trim.F1-B21-pH8.bam",0.12,"adapter_trim.F1-B4-pH8.bam",0.06,0.18 +"436","adapter_trim.F2-J189-pH7.bam","CM084275_1_319819.1, CM084271_1_44105575.1, CM084275_1_312961.1, CM084271_1_44077319.0, CM084269_1_43525399.0, CM084275_1_25393416.1, CM084276_1_2841296.1, CM084265_1_72368163.0, CM084266_1_65576934.0, CM084274_1_4708043.1, CM084278_1_20695466.1, CM084266_1_816291.1, CM084265_1_71831292.1, CM084268_1_28851913.0, CM084274_1_4671994.1, CM084265_1_72071381.1, CM084265_1_59221309.1, CM084267_1_5881751.1, CM084276_1_38558507.0, CM084269_1_41809353.0, CM084264_1_8233152.0, CM084274_1_4869924.1, CM084275_1_39774927.1, CM084267_1_4505277.0, CM084268_1_50681648.0, CM084264_1_34294397.1, CM084265_1_959800.0, CM084269_1_39737144.0, CM084264_1_68634780.1, CM084266_1_64164269.0",30,"adapter_trim.F1-B20-pH8.bam",0.02,"adapter_trim.F1-B7-pH8.bam",-0.19,0.21 +"437","adapter_trim.F2-J202-pH7.bam","CM084275_1_319819.1, CM084271_1_44105575.1, CM084275_1_312961.1, CM084271_1_44077319.0, CM084269_1_43525399.0, CM084275_1_25393416.1, CM084276_1_2841296.1, CM084265_1_72368163.0, CM084266_1_65576934.0, CM084274_1_4708043.1, CM084278_1_20695466.1, CM084266_1_816291.1, CM084265_1_71831292.1, CM084268_1_28851913.0, CM084274_1_4671994.1, CM084265_1_72071381.1, CM084265_1_59221309.1, CM084267_1_5881751.1, CM084276_1_38558507.0, CM084269_1_41809353.0, CM084264_1_8233152.0, CM084274_1_4869924.1, CM084275_1_39774927.1, CM084267_1_4505277.0, CM084268_1_50681648.0, CM084264_1_34294397.1, CM084265_1_959800.0, CM084269_1_39737144.0, CM084264_1_68634780.1, CM084266_1_64164269.0",30,"adapter_trim.F1-B20-pH8.bam",-0.05,"adapter_trim.F1-B5-pH8.bam",-0.43,0.48 +"438","adapter_trim.F2-J224-pH7.bam","CM084275_1_319819.1, CM084271_1_44105575.1, CM084275_1_312961.1, CM084271_1_44077319.0, CM084269_1_43525399.0, CM084275_1_25393416.1, CM084276_1_2841296.1, CM084265_1_72368163.0, CM084266_1_65576934.0, CM084274_1_4708043.1, CM084278_1_20695466.1, CM084266_1_816291.1, CM084265_1_71831292.1, CM084268_1_28851913.0, CM084274_1_4671994.1, CM084265_1_72071381.1, CM084265_1_59221309.1, CM084267_1_5881751.1, CM084276_1_38558507.0, CM084269_1_41809353.0, CM084264_1_8233152.0, CM084274_1_4869924.1, CM084275_1_39774927.1, CM084267_1_4505277.0, CM084268_1_50681648.0, CM084264_1_34294397.1, CM084265_1_959800.0, CM084269_1_39737144.0, CM084264_1_68634780.1, CM084266_1_64164269.0",30,"adapter_trim.F1-B25-pH8.bam",-0.16,"adapter_trim.F1-B5-pH8.bam",-0.26,0.42 +"439","adapter_trim.F2-B1-pH7.bam","CM084275_1_319819.1, CM084271_1_44105575.1, CM084275_1_312961.1, CM084271_1_44077319.0, CM084269_1_43525399.0, CM084275_1_25393416.1, CM084276_1_2841296.1, CM084265_1_72368163.0, CM084266_1_65576934.0, CM084274_1_4708043.1, CM084278_1_20695466.1, CM084266_1_816291.1, CM084265_1_71831292.1, CM084268_1_28851913.0, CM084274_1_4671994.1, CM084265_1_72071381.1, CM084265_1_59221309.1, CM084267_1_5881751.1, CM084276_1_38558507.0, CM084269_1_41809353.0, CM084264_1_8233152.0, CM084274_1_4869924.1, CM084275_1_39774927.1, CM084267_1_4505277.0, CM084268_1_50681648.0, CM084264_1_34294397.1, CM084265_1_959800.0, CM084269_1_39737144.0, CM084264_1_68634780.1, CM084266_1_64164269.0",30,"adapter_trim.F1-B25-pH8.bam",-0.32,"adapter_trim.F1-B5-pH8.bam",-0.04,0.36 +"440","adapter_trim.F2-B7-pH7.bam","CM084275_1_319819.1, CM084271_1_44105575.1, CM084275_1_312961.1, CM084271_1_44077319.0, CM084269_1_43525399.0, CM084275_1_25393416.1, CM084276_1_2841296.1, CM084265_1_72368163.0, CM084266_1_65576934.0, CM084274_1_4708043.1, CM084278_1_20695466.1, CM084266_1_816291.1, CM084265_1_71831292.1, CM084268_1_28851913.0, CM084274_1_4671994.1, CM084265_1_72071381.1, CM084265_1_59221309.1, CM084267_1_5881751.1, CM084276_1_38558507.0, CM084269_1_41809353.0, CM084264_1_8233152.0, CM084274_1_4869924.1, CM084275_1_39774927.1, CM084267_1_4505277.0, CM084268_1_50681648.0, CM084264_1_34294397.1, CM084265_1_959800.0, CM084269_1_39737144.0, CM084264_1_68634780.1, CM084266_1_64164269.0",30,"adapter_trim.F1-B25-pH8.bam",-0.3,"adapter_trim.F1-B5-pH8.bam",-0.32,0.62 +"441","adapter_trim.F2-J224-pH7.bam","CM084271_1_44086137.0, CM084265_1_46089269.0, CM084267_1_591197.1, CM084279_1_160989.1, CM084275_1_8878532.1, CM084269_1_35627054.0, CM084266_1_70743731.1, CM084278_1_31960704.1, CM084274_1_4863872.0, CM084279_1_1072380.0, CM084279_1_32915269.1, CM084271_1_43338888.0, CM084265_1_14403401.0, CM084267_1_699449.1, CM084264_1_69712159.1, CM084278_1_20733311.1, CM084275_1_8878509.1, CM084275_1_38995359.1, CM084274_1_4708033.1, CM084274_1_4818355.0, CM084270_1_42355508.1, CM084268_1_50321875.0, CM084268_1_42024.0, CM084271_1_344606.0, CM084271_1_44090328.0, CM084266_1_70531188.0, CM084271_1_19655820.1, CM084272_1_18189795.1, CM084276_1_25807604.1, CM084269_1_4636404.1",30,"adapter_trim.F1-B20-pH8.bam",-0.07,"adapter_trim.F1-B1-pH8.bam",-0.13,0.2 +"442","adapter_trim.F2-B8-pH7.bam","CM084271_1_44086137.0, CM084265_1_46089269.0, CM084267_1_591197.1, CM084279_1_160989.1, CM084275_1_8878532.1, CM084269_1_35627054.0, CM084266_1_70743731.1, CM084278_1_31960704.1, CM084274_1_4863872.0, CM084279_1_1072380.0, CM084279_1_32915269.1, CM084271_1_43338888.0, CM084265_1_14403401.0, CM084267_1_699449.1, CM084264_1_69712159.1, CM084278_1_20733311.1, CM084275_1_8878509.1, CM084275_1_38995359.1, CM084274_1_4708033.1, CM084274_1_4818355.0, CM084270_1_42355508.1, CM084268_1_50321875.0, CM084268_1_42024.0, CM084271_1_344606.0, CM084271_1_44090328.0, CM084266_1_70531188.0, CM084271_1_19655820.1, CM084272_1_18189795.1, CM084276_1_25807604.1, CM084269_1_4636404.1",30,"adapter_trim.F1-B25-pH8.bam",-0.19,"adapter_trim.F1-B7-pH8.bam",-0.61,0.8 +"443","adapter_trim.F2-J164-pH7.bam","CM084276_1_1625243.0, CM084266_1_68960407.1, CM084278_1_30230906.1, CM084274_1_4694855.0, CM084273_1_31865682.1, CM084270_1_15641795.0, CM084265_1_72990731.1, CM084274_1_4723640.1, CM084267_1_4505277.0, CM084266_1_65309860.1, CM084265_1_794917.0, CM084269_1_1556935.0, CM084265_1_70577871.0, CM084274_1_4869974.1, CM084276_1_38788200.0, CM084266_1_57882838.1, CM084273_1_7839417.1, CM084267_1_9176045.0, CM084279_1_28791311.1, CM084274_1_4862951.1, CM084277_1_6198930.0, CM084271_1_43868149.0, CM084271_1_346606.0, CM084276_1_38558603.1, CM084264_1_34300042.0, CM084276_1_38557410.1, CM084274_1_4773546.0, CM084265_1_794917.1, CM084265_1_65232929.1, CM084270_1_15641798.1",30,"adapter_trim.F1-B25-pH8.bam",0.19,"adapter_trim.F1-B3-pH8.bam",0.04,0.23 +"444","adapter_trim.F2-J224-pH7.bam","CM084276_1_1625243.0, CM084266_1_68960407.1, CM084278_1_30230906.1, CM084274_1_4694855.0, CM084273_1_31865682.1, CM084270_1_15641795.0, CM084265_1_72990731.1, CM084274_1_4723640.1, CM084267_1_4505277.0, CM084266_1_65309860.1, CM084265_1_794917.0, CM084269_1_1556935.0, CM084265_1_70577871.0, CM084274_1_4869974.1, CM084276_1_38788200.0, CM084266_1_57882838.1, CM084273_1_7839417.1, CM084267_1_9176045.0, CM084279_1_28791311.1, CM084274_1_4862951.1, CM084277_1_6198930.0, CM084271_1_43868149.0, CM084271_1_346606.0, CM084276_1_38558603.1, CM084264_1_34300042.0, CM084276_1_38557410.1, CM084274_1_4773546.0, CM084265_1_794917.1, CM084265_1_65232929.1, CM084270_1_15641798.1",30,"adapter_trim.F1-B25-pH8.bam",-0.28,"adapter_trim.F1-B3-pH8.bam",-0.39,0.67 +"445","adapter_trim.F2-J227-pH7.bam","CM084276_1_1625243.0, CM084266_1_68960407.1, CM084278_1_30230906.1, CM084274_1_4694855.0, CM084273_1_31865682.1, CM084270_1_15641795.0, CM084265_1_72990731.1, CM084274_1_4723640.1, CM084267_1_4505277.0, CM084266_1_65309860.1, CM084265_1_794917.0, CM084269_1_1556935.0, CM084265_1_70577871.0, CM084274_1_4869974.1, CM084276_1_38788200.0, CM084266_1_57882838.1, CM084273_1_7839417.1, CM084267_1_9176045.0, CM084279_1_28791311.1, CM084274_1_4862951.1, CM084277_1_6198930.0, CM084271_1_43868149.0, CM084271_1_346606.0, CM084276_1_38558603.1, CM084264_1_34300042.0, CM084276_1_38557410.1, CM084274_1_4773546.0, CM084265_1_794917.1, CM084265_1_65232929.1, CM084270_1_15641798.1",30,"adapter_trim.F1-B20-pH8.bam",-0.09,"adapter_trim.F1-B3-pH8.bam",-0.35,0.44 +"446","adapter_trim.F2-B1-pH7.bam","CM084276_1_1625243.0, CM084266_1_68960407.1, CM084278_1_30230906.1, CM084274_1_4694855.0, CM084273_1_31865682.1, CM084270_1_15641795.0, CM084265_1_72990731.1, CM084274_1_4723640.1, CM084267_1_4505277.0, CM084266_1_65309860.1, CM084265_1_794917.0, CM084269_1_1556935.0, CM084265_1_70577871.0, CM084274_1_4869974.1, CM084276_1_38788200.0, CM084266_1_57882838.1, CM084273_1_7839417.1, CM084267_1_9176045.0, CM084279_1_28791311.1, CM084274_1_4862951.1, CM084277_1_6198930.0, CM084271_1_43868149.0, CM084271_1_346606.0, CM084276_1_38558603.1, CM084264_1_34300042.0, CM084276_1_38557410.1, CM084274_1_4773546.0, CM084265_1_794917.1, CM084265_1_65232929.1, 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CM084275_1_40706380.1, CM084266_1_70940178.0, CM084274_1_34977131.1, CM084276_1_38970482.0, CM084269_1_15812960.1, CM084265_1_39553350.0, CM084274_1_4734036.0, CM084269_1_42862803.0, CM084269_1_15806965.1, CM084268_1_2717677.0, CM084274_1_4734039.1, CM084275_1_35717367.1, CM084264_1_8099096.0, CM084271_1_43868181.0, CM084269_1_15827788.1, CM084271_1_3819548.1, CM084274_1_4792352.1, CM084268_1_50219227.1, CM084267_1_2910818.1, CM084278_1_32252678.1, CM084274_1_34976974.1, CM084267_1_51919009.0, CM084279_1_10147284.1, CM084266_1_57888961.1, CM084264_1_73604722.0, CM084275_1_25393416.0, CM084269_1_15812959.1","30","-0.27","-0.16","0.43","2, 4","1, 4","TRUE" +"459","adapter_trim.F1-B9-pH8.bam","adapter_trim.F1-B25-pH8.bam","adapter_trim.F2-J203-pH7.bam","CM084278_1_20679238.1, CM084276_1_38287449.0, CM084267_1_52591726.0, CM084274_1_5120580.1, CM084269_1_43525116.1, CM084264_1_34293018.0, CM084273_1_42285391.0, CM084274_1_4862784.1, CM084265_1_65204740.0, CM084266_1_71166448.0, CM084264_1_75506833.1, CM084271_1_43860422.0, CM084273_1_31862787.1, CM084267_1_700054.1, CM084268_1_18512798.0, CM084266_1_70706235.0, CM084264_1_73291504.1, CM084278_1_19960942.1, CM084268_1_42008.1, CM084269_1_40336193.0, CM084278_1_22644747.1, CM084268_1_50323442.1, CM084276_1_2855917.0, CM084278_1_22664889.1, CM084264_1_70466152.0, CM084267_1_13261464.1, CM084278_1_8558559.1, CM084270_1_4751834.1, CM084271_1_340905.0, CM084276_1_38072623.0","30","-0.05","-0.1","0.15","3","1, 4","FALSE" +"460","adapter_trim.F1-B9-pH8.bam","adapter_trim.F1-B21-pH8.bam","adapter_trim.F2-J227-pH7.bam","CM084269_1_1567129.0, CM084272_1_43331300.1, CM084272_1_1144109.1, CM084268_1_50321875.0, CM084277_1_6198930.1, CM084274_1_4709089.0, CM084266_1_57841523.0, CM084268_1_3703420.0, CM084265_1_71925452.0, CM084269_1_15798357.0, CM084272_1_26336261.1, CM084275_1_23096151.0, CM084268_1_28845823.1, CM084266_1_64723817.1, CM084271_1_44104310.1, CM084269_1_45238132.0, CM084278_1_20630020.0, CM084264_1_70210132.0, CM084279_1_992716.0, CM084265_1_61648596.1, CM084266_1_68478650.0, CM084265_1_65268038.0, CM084264_1_66522465.1, CM084275_1_328861.1, CM084265_1_72926026.1, CM084279_1_1064862.1, CM084274_1_4863996.0, CM084279_1_32640564.1, CM084274_1_4795112.1, CM084269_1_43525214.1","30","-0.08","0.08","0.16","2, 4","1, 4","TRUE" diff --git a/RAnalysis/Output/Popgen/parentage_sequoia/F1BF2O/Low/F1BF2O_Low_final.csv b/RAnalysis/Output/Popgen/parentage_sequoia/F1BF2O/Low/F1BF2O_Low_final.csv new file mode 100644 index 0000000..574420c --- /dev/null +++ b/RAnalysis/Output/Popgen/parentage_sequoia/F1BF2O/Low/F1BF2O_Low_final.csv @@ -0,0 +1,33 @@ +"","id","dam","sire","absLLRtotal","Fertilization_pairs","loci" +"1","adapter_trim.F2-J104-pH8.bam","adapter_trim.F1-B21-pH8.bam","adapter_trim.F1-B1-pH8.bam",0.7,TRUE,"CM084267_1_13231056.1, CM084264_1_70355122.0, CM084271_1_43934411.0, CM084272_1_33454573.1, CM084264_1_69275359.1, CM084265_1_66143662.1, CM084278_1_31960704.0, CM084273_1_21179270.1, CM084271_1_44077341.1, CM084264_1_70471433.0, CM084274_1_4773546.0, CM084270_1_42355495.1, CM084278_1_22664889.0, CM084270_1_47077463.0, CM084270_1_4920904.1, CM084274_1_4785935.1, CM084276_1_11709759.0, CM084265_1_70577871.0, CM084268_1_1508040.1, CM084278_1_8558506.1, CM084276_1_20157216.0, CM084267_1_51248426.1, CM084278_1_28652016.0, CM084277_1_18546604.0, CM084268_1_3704020.0, CM084277_1_28144351.0, CM084266_1_68919241.1, CM084274_1_4694551.0, CM084266_1_64164372.0, CM084273_1_42253133.0" +"2","adapter_trim.F2-B10-pH8.bam","adapter_trim.F1-B15-pH8.bam","adapter_trim.F1-B1-pH8.bam",0.59,TRUE,"CM084264_1_26771529.1, CM084271_1_30532481.0, CM084265_1_71828881.0, CM084269_1_1538788.1, CM084271_1_43868125.1, CM084276_1_2855915.1, CM084266_1_71149029.0, CM084264_1_8098050.1, CM084264_1_72011674.1, CM084265_1_70607188.0, CM084275_1_25393263.0, CM084266_1_59802412.1, CM084269_1_43524472.0, CM084274_1_4870202.0, CM084274_1_21933035.1, CM084276_1_38558670.1, CM084270_1_1553326.0, CM084277_1_17835716.0, CM084279_1_32917233.1, CM084264_1_66439662.0, CM084265_1_790976.0, CM084270_1_47077595.1, CM084265_1_64735166.1, CM084266_1_70396060.1, CM084265_1_64585926.1, CM084270_1_42348998.1, CM084268_1_3699589.1, CM084279_1_10159275.0, CM084265_1_66143662.0, CM084265_1_24901859.0" +"3","adapter_trim.F2-J85-pH8.bam","adapter_trim.F1-B20-pH8.bam","adapter_trim.F1-B1-pH8.bam",0.7,TRUE,"CM084266_1_58086157.0, CM084274_1_43102349.0, CM084268_1_23612506.0, CM084266_1_67098131.0, CM084265_1_71925202.0, CM084266_1_69793914.0, CM084276_1_38787722.1, CM084264_1_2738036.1, CM084277_1_30611564.0, CM084266_1_23321801.0, CM084268_1_3699701.1, CM084276_1_38775920.0, CM084275_1_39781005.1, CM084279_1_10149633.1, CM084274_1_4796888.1, CM084271_1_37237148.0, CM084265_1_69004202.0, CM084269_1_15827759.0, CM084269_1_1558034.0, CM084269_1_15799390.0, CM084265_1_72978107.1, CM084271_1_289999.1, CM084265_1_71797896.0, CM084275_1_25388576.0, CM084278_1_20736236.0, CM084268_1_28845509.0, CM084277_1_18546604.0, CM084270_1_47103340.0, CM084277_1_30631454.1, CM084271_1_43860505.1" +"4","adapter_trim.F2-B13-pH8.bam","adapter_trim.F1-B8-pH8.bam","adapter_trim.F1-B1-pH8.bam",1.08,FALSE,"CM084275_1_25393709.0, CM084266_1_71149023.1, CM084269_1_15823421.0, CM084276_1_38559646.1, CM084265_1_71827811.0, CM084266_1_57888742.1, CM084264_1_70188213.1, CM084269_1_46692099.0, CM084268_1_18519472.0, CM084266_1_69547380.1, CM084272_1_29973150.1, CM084274_1_5566177.0, CM084275_1_39776469.0, CM084274_1_4723647.0, CM084279_1_1064676.1, CM084266_1_71224927.0, CM084274_1_4773495.0, CM084266_1_64726664.0, CM084276_1_1847305.1, CM084267_1_3748455.0, CM084274_1_4695098.0, CM084273_1_42294202.0, CM084268_1_4026799.1, CM084273_1_42285391.0, CM084266_1_61737001.0, CM084266_1_57885009.0, CM084264_1_34293018.1, CM084275_1_38169321.0, CM084266_1_58111750.0, CM084269_1_45420483.1" +"5","adapter_trim.F2-J122-pH8.bam","adapter_trim.F1-B8-pH8.bam","adapter_trim.F1-B10-pH8.bam",1.25,FALSE,"CM084275_1_35722051.1, CM084265_1_64196884.0, CM084270_1_47077463.0, CM084265_1_60316111.0, CM084268_1_3704024.0, CM084277_1_4875961.0, CM084269_1_1567360.1, CM084269_1_1558041.1, CM084264_1_69712159.0, CM084276_1_37144250.1, CM084266_1_71166412.1, CM084276_1_38775920.1, CM084274_1_4862014.1, CM084266_1_70181836.0, CM084276_1_37352348.0, CM084266_1_57884809.0, CM084269_1_1556138.1, CM084279_1_32644179.0, CM084268_1_49719742.0, CM084267_1_700114.0, CM084274_1_4778609.1, CM084277_1_31296163.1, CM084271_1_43851333.1, CM084278_1_20732798.1, CM084274_1_7449618.0, CM084274_1_4726638.0, CM084267_1_2081906.1, CM084269_1_39737155.0, CM084274_1_4671994.0, CM084265_1_68074259.0" +"6","adapter_trim.F2-J141-pH8.bam","adapter_trim.F1-B25-pH8.bam","adapter_trim.F1-B10-pH8.bam",0.91,FALSE,"CM084268_1_22932625.1, CM084274_1_4694254.1, CM084269_1_15799403.1, CM084275_1_120808.1, CM084266_1_66483893.0, CM084277_1_30027539.0, CM084267_1_51248426.1, CM084269_1_45438488.1, CM084264_1_61167189.1, CM084276_1_38552579.1, CM084265_1_71265328.0, CM084268_1_28845513.0, CM084267_1_832141.0, CM084271_1_37244938.0, CM084269_1_40338566.0, CM084269_1_43525146.0, CM084270_1_12307511.1, CM084271_1_30532401.1, CM084274_1_4694239.1, CM084272_1_1307854.0, CM084273_1_31864421.0, CM084267_1_8118540.1, CM084269_1_35642171.1, CM084271_1_379011.1, CM084267_1_6421243.0, CM084278_1_16774412.0, CM084266_1_69625503.0, CM084273_1_42252907.0, CM084270_1_46588162.1, CM084266_1_68515581.1" +"7","adapter_trim.F2-J83-pH8.bam","adapter_trim.F1-B15-pH8.bam","adapter_trim.F1-B10-pH8.bam",0.76,FALSE,"CM084274_1_4694578.0, CM084275_1_327388.1, CM084268_1_50679469.1, CM084274_1_4708033.0, CM084279_1_32641182.1, CM084264_1_70355122.1, CM084268_1_82411.1, CM084275_1_1304701.1, CM084269_1_1538788.0, CM084265_1_69381551.0, CM084268_1_3704024.1, CM084276_1_38558546.0, CM084269_1_1549398.0, CM084269_1_47563826.0, CM084268_1_4036222.0, CM084273_1_31864733.0, CM084274_1_34977132.1, CM084270_1_46590815.0, CM084275_1_400249.0, CM084276_1_38773493.1, CM084270_1_35204451.1, CM084268_1_50219223.1, CM084278_1_19961223.0, CM084272_1_33617974.0, CM084271_1_276716.1, CM084268_1_28845816.0, CM084272_1_18170755.0, CM084279_1_32915259.0, CM084265_1_59221275.1, CM084264_1_61167189.0" +"8","adapter_trim.F2-J127-pH8.bam","adapter_trim.F1-B15-pH8.bam","adapter_trim.F1-B10-pH8.bam",1.01,FALSE,"CM084266_1_58086157.0, CM084274_1_43102349.0, CM084268_1_23612506.0, CM084266_1_67098131.0, CM084265_1_71925202.0, CM084266_1_69793914.0, CM084276_1_38787722.1, CM084264_1_2738036.1, CM084277_1_30611564.0, CM084266_1_23321801.0, CM084268_1_3699701.1, CM084276_1_38775920.0, CM084275_1_39781005.1, CM084279_1_10149633.1, CM084274_1_4796888.1, CM084271_1_37237148.0, CM084265_1_69004202.0, CM084269_1_15827759.0, CM084269_1_1558034.0, CM084269_1_15799390.0, CM084265_1_72978107.1, CM084271_1_289999.1, CM084265_1_71797896.0, CM084275_1_25388576.0, CM084278_1_20736236.0, CM084268_1_28845509.0, CM084277_1_18546604.0, CM084270_1_47103340.0, CM084277_1_30631454.1, CM084271_1_43860505.1" +"9","adapter_trim.F2-J107-pH8.bam","adapter_trim.F1-B8-pH8.bam","adapter_trim.F1-B10-pH8.bam",0.88,FALSE,"CM084269_1_43528607.1, CM084264_1_75506833.0, CM084266_1_69793914.0, CM084264_1_70190068.0, CM084274_1_4694263.1, CM084275_1_19996655.0, CM084267_1_6421475.1, CM084266_1_57885157.1, CM084265_1_68869208.1, CM084275_1_675849.1, CM084278_1_32252684.0, CM084278_1_20600197.1, CM084271_1_19934424.1, CM084267_1_30270830.0, CM084269_1_15823423.1, CM084266_1_52832550.1, CM084271_1_344406.0, CM084278_1_20701460.0, CM084272_1_18193991.0, CM084274_1_4769088.0, CM084273_1_10424351.0, CM084274_1_3691337.0, CM084268_1_28845522.1, CM084275_1_39502454.1, CM084264_1_66522465.0, CM084268_1_24031324.1, CM084265_1_72368299.1, CM084274_1_4795062.1, CM084267_1_51248425.0, CM084266_1_68919260.1" 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CM084266_1_69141150.1, CM084274_1_3692385.0, CM084265_1_3130640.0, CM084267_1_5165711.1, CM084275_1_77171.1, CM084279_1_10156984.0, CM084271_1_44091708.1, CM084268_1_50216562.0" +"29","adapter_trim.F2-J142-pH8.bam","adapter_trim.F1-B15-pH8.bam","adapter_trim.F1-B9-pH8.bam",0.65,TRUE,"CM084277_1_29782029.1, CM084265_1_58036330.1, CM084264_1_6990362.1, CM084266_1_23295280.0, CM084269_1_43524104.0, CM084268_1_50202339.1, CM084271_1_1033797.0, CM084275_1_35722051.1, CM084271_1_39685141.1, CM084264_1_48147317.0, CM084264_1_73929737.0, CM084275_1_25388529.0, CM084268_1_42009.1, CM084276_1_38072633.1, CM084279_1_1060874.1, CM084276_1_38552504.1, CM084279_1_1073128.0, CM084267_1_2309126.0, CM084270_1_42348999.0, CM084274_1_4709677.1, CM084274_1_5120654.0, CM084268_1_50323442.0, CM084271_1_43868179.0, CM084270_1_8242309.1, CM084267_1_5165711.1, CM084265_1_72071409.0, CM084264_1_70182851.1, CM084279_1_1070763.1, CM084268_1_50739136.1, CM084270_1_32126724.0" +"30","adapter_trim.F2-J147-pH8.bam","adapter_trim.F1-B15-pH8.bam","adapter_trim.F1-B9-pH8.bam",1.2,TRUE,"CM084277_1_30635514.1, CM084277_1_30505537.0, CM084274_1_4863903.1, CM084274_1_4864445.0, CM084278_1_28652016.1, CM084265_1_60316111.1, CM084269_1_46688879.0, CM084276_1_1625423.1, CM084266_1_63195162.1, CM084278_1_20734507.0, CM084271_1_43851366.0, CM084265_1_68074267.0, CM084268_1_50200545.0, CM084271_1_3814148.0, CM084271_1_44069731.0, CM084268_1_24030404.0, CM084265_1_64527973.0, CM084278_1_22657588.0, CM084264_1_71718010.0, CM084274_1_34977105.1, CM084271_1_44105575.0, CM084278_1_8558566.1, CM084265_1_71794141.0, CM084264_1_72054205.0, CM084275_1_38169337.0, CM084267_1_5165671.0, CM084274_1_4727151.0, CM084265_1_8362532.1, CM084274_1_4863726.0, CM084279_1_1892713.0" +"31","adapter_trim.F2-J145-pH8.bam","adapter_trim.F1-B25-pH8.bam","adapter_trim.F1-B9-pH8.bam",0.59,FALSE,"CM084269_1_12905590.1, CM084269_1_15809957.0, CM084271_1_257176.0, CM084272_1_1311984.0, CM084277_1_29781980.1, CM084269_1_40447963.0, CM084271_1_37237148.1, CM084276_1_25809477.0, CM084273_1_214008.1, CM084268_1_276461.1, CM084274_1_4694578.0, CM084267_1_50994309.0, CM084273_1_31865817.0, CM084276_1_2855915.1, CM084273_1_7839325.0, CM084267_1_52593733.0, CM084272_1_1308683.0, CM084278_1_20858397.0, CM084266_1_61737001.0, CM084269_1_1549405.1, CM084269_1_15823106.0, CM084272_1_18188792.1, CM084274_1_34976974.0, CM084269_1_35627054.0, CM084266_1_71319410.1, CM084266_1_23294618.1, CM084276_1_38787723.0, CM084277_1_30623529.1, CM084270_1_47103324.0, CM084266_1_67098131.1" +"32","adapter_trim.F2-J146-pH8.bam","adapter_trim.F1-B8-pH8.bam","adapter_trim.F1-B9-pH8.bam",1.05,TRUE,"CM084268_1_49721854.1, CM084271_1_44090302.0, CM084274_1_4773546.0, CM084274_1_4671994.1, CM084278_1_20858390.0, CM084264_1_74183870.0, CM084266_1_70531191.1, CM084269_1_42862704.1, CM084271_1_30532519.0, CM084269_1_1567834.0, CM084264_1_73931171.0, CM084271_1_44190420.0, CM084265_1_68806450.0, CM084265_1_64196888.0, CM084278_1_20635947.0, CM084269_1_35627054.0, CM084266_1_70930072.1, CM084276_1_38558658.0, CM084265_1_61648709.0, CM084278_1_24948220.0, CM084273_1_31863606.0, CM084266_1_69623581.0, CM084279_1_31065250.0, CM084266_1_64725837.0, CM084267_1_2652774.1, CM084272_1_43469486.0, CM084274_1_4708063.0, CM084279_1_1073112.0, CM084278_1_20861266.0, CM084265_1_66688742.1" diff --git a/RAnalysis/Output/Popgen/parentage_sequoia/F1BF2O/Low/F1BF2O_Low_raw.csv b/RAnalysis/Output/Popgen/parentage_sequoia/F1BF2O/Low/F1BF2O_Low_raw.csv new file mode 100644 index 0000000..5dd3695 --- /dev/null +++ b/RAnalysis/Output/Popgen/parentage_sequoia/F1BF2O/Low/F1BF2O_Low_raw.csv @@ -0,0 +1,221 @@ +"","id","loci","n.loci","dam","LLRdam","sire","LLRsire","absLLRtotal" +"1","adapter_trim.F2-J105-pH8.bam","CM084275_1_35722051.1, CM084265_1_64196884.0, CM084270_1_47077463.0, CM084265_1_60316111.0, CM084268_1_3704024.0, CM084277_1_4875961.0, CM084269_1_1567360.1, CM084269_1_1558041.1, CM084264_1_69712159.0, CM084276_1_37144250.1, CM084266_1_71166412.1, CM084276_1_38775920.1, CM084274_1_4862014.1, CM084266_1_70181836.0, CM084276_1_37352348.0, CM084266_1_57884809.0, CM084269_1_1556138.1, CM084279_1_32644179.0, CM084268_1_49719742.0, CM084267_1_700114.0, CM084274_1_4778609.1, CM084277_1_31296163.1, CM084271_1_43851333.1, CM084278_1_20732798.1, CM084274_1_7449618.0, CM084274_1_4726638.0, CM084267_1_2081906.1, CM084269_1_39737155.0, CM084274_1_4671994.0, CM084265_1_68074259.0",30,"adapter_trim.F1-B25-pH8.bam",-0.34,"adapter_trim.F1-B3-pH8.bam",-0.27,0.61 +"2","adapter_trim.F2-J122-pH8.bam","CM084275_1_35722051.1, CM084265_1_64196884.0, CM084270_1_47077463.0, CM084265_1_60316111.0, CM084268_1_3704024.0, CM084277_1_4875961.0, CM084269_1_1567360.1, CM084269_1_1558041.1, CM084264_1_69712159.0, CM084276_1_37144250.1, CM084266_1_71166412.1, CM084276_1_38775920.1, CM084274_1_4862014.1, CM084266_1_70181836.0, CM084276_1_37352348.0, CM084266_1_57884809.0, CM084269_1_1556138.1, CM084279_1_32644179.0, CM084268_1_49719742.0, CM084267_1_700114.0, CM084274_1_4778609.1, CM084277_1_31296163.1, CM084271_1_43851333.1, CM084278_1_20732798.1, CM084274_1_7449618.0, CM084274_1_4726638.0, CM084267_1_2081906.1, CM084269_1_39737155.0, CM084274_1_4671994.0, CM084265_1_68074259.0",30,"adapter_trim.F1-B8-pH8.bam",-0.91,"adapter_trim.F1-B10-pH8.bam",-0.34,1.25 +"3","adapter_trim.F2-B12-pH8.bam","CM084273_1_31863691.1, CM084276_1_1852865.0, CM084272_1_18191744.0, CM084279_1_33759502.1, CM084267_1_6421632.1, CM084266_1_23295949.0, CM084264_1_64874049.0, CM084268_1_49721842.1, CM084265_1_64735166.0, CM084279_1_32641182.1, CM084264_1_34300494.1, CM084278_1_31960662.1, CM084276_1_54402.1, CM084266_1_69625511.1, CM084269_1_35627054.0, CM084268_1_276378.0, CM084277_1_30027552.1, CM084274_1_4864445.1, CM084268_1_50679551.0, CM084271_1_43934411.0, CM084268_1_50224889.0, CM084266_1_70400406.1, CM084278_1_23542073.1, CM084274_1_4812118.1, CM084279_1_32650016.0, CM084265_1_46089269.1, CM084272_1_18194019.1, CM084276_1_1625243.0, CM084276_1_12383618.1, CM084274_1_4694551.0",30,"adapter_trim.F1-B21-pH8.bam",-0.24,"adapter_trim.F1-B1-pH8.bam",-0.44,0.68 +"4","adapter_trim.F2-J145-pH8.bam","CM084265_1_24898691.0, CM084275_1_35719388.1, CM084278_1_20689091.0, CM084273_1_31862179.0, CM084267_1_51000190.0, CM084266_1_69625503.0, CM084275_1_36059374.1, CM084269_1_45438470.1, CM084276_1_11705154.1, CM084278_1_20732810.0, CM084276_1_7202888.1, CM084269_1_43524375.1, CM084271_1_1034868.1, CM084272_1_1596808.1, CM084265_1_73060663.1, CM084265_1_71265272.1, CM084270_1_19464668.0, CM084276_1_1852865.0, CM084268_1_82245.0, CM084270_1_8242350.1, CM084267_1_699428.0, CM084266_1_69794604.0, CM084270_1_47103324.1, CM084278_1_20689098.0, CM084267_1_48167385.0, CM084274_1_4862014.0, CM084271_1_337313.1, CM084270_1_21846007.0, CM084268_1_276461.0, CM084267_1_8118540.1",30,"adapter_trim.F1-B15-pH8.bam",-0.09,"adapter_trim.F1-B4-pH8.bam",-0.06,0.15 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CM084265_1_70798125.1, CM084277_1_18535878.1, CM084266_1_69806293.1, CM084274_1_4773492.0, CM084275_1_667184.1, CM084269_1_4625304.0, CM084274_1_42855653.0, CM084264_1_74273479.1, CM084265_1_59221229.1, CM084273_1_42253181.1, CM084264_1_5215232.1, CM084279_1_10153273.1, CM084272_1_18188792.1, CM084269_1_45420483.1",30,"adapter_trim.F1-B25-pH8.bam",-0.25,"adapter_trim.F1-B9-pH8.bam",-0.29,0.54 +"8","adapter_trim.F2-J105-pH8.bam","CM084275_1_39502397.0, CM084271_1_43817223.0, CM084276_1_37352348.0, CM084274_1_42855653.0, CM084270_1_8444546.0, CM084271_1_346606.0, CM084264_1_26773648.0, CM084276_1_38072623.0, CM084264_1_69294926.0, CM084266_1_66377784.1, CM084275_1_23083657.0, CM084275_1_4345708.0, CM084266_1_64164374.1, CM084276_1_38558603.0, CM084266_1_65347078.1, CM084275_1_25388529.1, CM084275_1_36059252.1, CM084264_1_73291504.0, CM084279_1_10150670.1, CM084277_1_10628755.0, CM084278_1_20867809.1, CM084268_1_28855770.1, CM084269_1_1558052.0, CM084268_1_4550920.1, CM084272_1_1596808.1, 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CM084272_1_33454573.0, CM084271_1_43849246.0, CM084278_1_23540735.1, CM084268_1_45604.0, CM084266_1_63167162.0, CM084269_1_12905597.1, CM084268_1_2832742.0",30,"adapter_trim.F1-B8-pH8.bam",-0.09,"adapter_trim.F1-B10-pH8.bam",-0.21,0.3 +"14","adapter_trim.F2-J126-pH8.bam","CM084271_1_43920589.1, CM084275_1_25396988.1, CM084272_1_33515302.0, CM084278_1_22667296.0, CM084265_1_68786095.1, CM084276_1_38558604.0, CM084269_1_4636406.1, CM084279_1_1072380.0, CM084271_1_30532473.0, CM084272_1_33503448.1, CM084274_1_3691747.1, CM084271_1_39686056.0, CM084266_1_64725838.0, CM084271_1_43851366.1, CM084270_1_15641795.1, CM084273_1_7839386.0, CM084264_1_72117233.0, CM084266_1_64725871.0, CM084271_1_43920589.1, CM084274_1_4785921.0, CM084271_1_44066688.1, CM084267_1_51346515.1, CM084271_1_44083919.1, CM084272_1_33454573.0, CM084271_1_43849246.0, CM084278_1_23540735.1, CM084268_1_45604.0, CM084266_1_63167162.0, CM084269_1_12905597.1, 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CM084272_1_33515302.0, CM084278_1_22667296.0, CM084265_1_68786095.1, CM084276_1_38558604.0, CM084269_1_4636406.1, CM084279_1_1072380.0, CM084271_1_30532473.0, CM084272_1_33503448.1, CM084274_1_3691747.1, CM084271_1_39686056.0, CM084266_1_64725838.0, CM084271_1_43851366.1, CM084270_1_15641795.1, CM084273_1_7839386.0, CM084264_1_72117233.0, CM084266_1_64725871.0, CM084271_1_43920589.1, CM084274_1_4785921.0, CM084271_1_44066688.1, CM084267_1_51346515.1, CM084271_1_44083919.1, CM084272_1_33454573.0, CM084271_1_43849246.0, CM084278_1_23540735.1, CM084268_1_45604.0, CM084266_1_63167162.0, CM084269_1_12905597.1, CM084268_1_2832742.0",30,"adapter_trim.F1-B21-pH8.bam",-0.1,"adapter_trim.F1-B7-pH8.bam",-0.31,0.41 +"17","adapter_trim.F2-J85-pH8.bam","CM084271_1_43920589.1, CM084275_1_25396988.1, CM084272_1_33515302.0, CM084278_1_22667296.0, CM084265_1_68786095.1, CM084276_1_38558604.0, CM084269_1_4636406.1, CM084279_1_1072380.0, CM084271_1_30532473.0, CM084272_1_33503448.1, CM084274_1_3691747.1, 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CM084266_1_63195191.0, CM084275_1_35722058.1, CM084274_1_11694583.0, CM084265_1_69009992.1, CM084266_1_65347078.0, CM084266_1_65576820.1, CM084266_1_69315469.1",30,"adapter_trim.F1-B25-pH8.bam",-0.27,"adapter_trim.F1-B3-pH8.bam",-0.19,0.46 +"30","adapter_trim.F2-J142-pH8.bam","CM084264_1_34300890.1, CM084264_1_70471577.1, CM084279_1_1060874.1, CM084274_1_4730089.1, CM084276_1_1856902.1, CM084273_1_32683016.1, CM084264_1_73927104.1, CM084264_1_2740285.1, CM084268_1_50224886.0, CM084278_1_16774023.1, CM084278_1_20732803.1, CM084264_1_74800265.1, CM084275_1_1212337.1, CM084276_1_1856653.1, CM084265_1_46089443.0, CM084266_1_70400406.1, CM084271_1_26324168.0, CM084274_1_4723640.0, CM084271_1_7137729.0, CM084271_1_379057.0, CM084276_1_38960936.1, CM084274_1_3691349.1, CM084272_1_26336261.1, CM084274_1_4795479.0, CM084267_1_51167077.1, CM084267_1_5168546.1, CM084271_1_3818665.0, CM084265_1_66143662.1, CM084267_1_832141.0, 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CM084278_1_31960704.0, CM084269_1_4625303.0, CM084272_1_18188620.0, CM084271_1_11500058.1, CM084266_1_71166412.0, CM084278_1_20625152.1, CM084269_1_12905597.0, CM084274_1_4796079.1, CM084273_1_32683005.1, CM084266_1_62462208.0, CM084265_1_66688742.0, CM084269_1_15823106.0, CM084264_1_64875158.1, CM084268_1_49720512.0, CM084266_1_68659872.1, CM084275_1_25395480.1, CM084275_1_667184.1, CM084267_1_9175847.0, CM084276_1_20157071.1, CM084278_1_22667297.0, CM084276_1_20157194.0, CM084278_1_20742383.1, CM084275_1_319819.0, CM084272_1_18553651.0, CM084278_1_31960662.0, CM084273_1_7839386.1, CM084267_1_51000174.0, CM084274_1_42296087.0, CM084264_1_8112731.1",30,"adapter_trim.F1-B25-pH8.bam",-0.36,"adapter_trim.F1-B5-pH8.bam",-0.25,0.61 +"43","adapter_trim.F2-J84-pH8.bam","CM084276_1_38785557.0, CM084278_1_31960704.0, CM084269_1_4625303.0, CM084272_1_18188620.0, CM084271_1_11500058.1, CM084266_1_71166412.0, CM084278_1_20625152.1, CM084269_1_12905597.0, CM084274_1_4796079.1, CM084273_1_32683005.1, CM084266_1_62462208.0, CM084265_1_66688742.0, CM084269_1_15823106.0, CM084264_1_64875158.1, CM084268_1_49720512.0, CM084266_1_68659872.1, CM084275_1_25395480.1, CM084275_1_667184.1, CM084267_1_9175847.0, CM084276_1_20157071.1, CM084278_1_22667297.0, CM084276_1_20157194.0, CM084278_1_20742383.1, CM084275_1_319819.0, CM084272_1_18553651.0, CM084278_1_31960662.0, CM084273_1_7839386.1, CM084267_1_51000174.0, CM084274_1_42296087.0, CM084264_1_8112731.1",30,"adapter_trim.F1-B21-pH8.bam",-0.14,"adapter_trim.F1-B8-pH8.bam",-0.1,0.24 +"44","adapter_trim.F2-J107-pH8.bam","CM084269_1_43528607.1, CM084264_1_75506833.0, CM084266_1_69793914.0, CM084264_1_70190068.0, CM084274_1_4694263.1, CM084275_1_19996655.0, CM084267_1_6421475.1, CM084266_1_57885157.1, CM084265_1_68869208.1, CM084275_1_675849.1, CM084278_1_32252684.0, CM084278_1_20600197.1, CM084271_1_19934424.1, CM084267_1_30270830.0, CM084269_1_15823423.1, CM084266_1_52832550.1, CM084271_1_344406.0, CM084278_1_20701460.0, CM084272_1_18193991.0, CM084274_1_4769088.0, CM084273_1_10424351.0, CM084274_1_3691337.0, CM084268_1_28845522.1, CM084275_1_39502454.1, CM084264_1_66522465.0, CM084268_1_24031324.1, CM084265_1_72368299.1, CM084274_1_4795062.1, CM084267_1_51248425.0, CM084266_1_68919260.1",30,"adapter_trim.F1-B8-pH8.bam",-0.37,"adapter_trim.F1-B10-pH8.bam",-0.51,0.88 +"45","adapter_trim.F2-J85-pH8.bam","CM084269_1_43528607.1, CM084264_1_75506833.0, CM084266_1_69793914.0, CM084264_1_70190068.0, CM084274_1_4694263.1, CM084275_1_19996655.0, CM084267_1_6421475.1, CM084266_1_57885157.1, CM084265_1_68869208.1, CM084275_1_675849.1, CM084278_1_32252684.0, CM084278_1_20600197.1, CM084271_1_19934424.1, CM084267_1_30270830.0, CM084269_1_15823423.1, CM084266_1_52832550.1, CM084271_1_344406.0, CM084278_1_20701460.0, CM084272_1_18193991.0, CM084274_1_4769088.0, CM084273_1_10424351.0, CM084274_1_3691337.0, CM084268_1_28845522.1, CM084275_1_39502454.1, CM084264_1_66522465.0, CM084268_1_24031324.1, CM084265_1_72368299.1, CM084274_1_4795062.1, CM084267_1_51248425.0, CM084266_1_68919260.1",30,"adapter_trim.F1-B25-pH8.bam",0.07,"adapter_trim.F1-B7-pH8.bam",0.1,0.17 +"46","adapter_trim.F2-J88-pH8.bam","CM084269_1_43528607.1, CM084264_1_75506833.0, CM084266_1_69793914.0, CM084264_1_70190068.0, CM084274_1_4694263.1, CM084275_1_19996655.0, CM084267_1_6421475.1, CM084266_1_57885157.1, CM084265_1_68869208.1, CM084275_1_675849.1, CM084278_1_32252684.0, CM084278_1_20600197.1, CM084271_1_19934424.1, CM084267_1_30270830.0, CM084269_1_15823423.1, CM084266_1_52832550.1, CM084271_1_344406.0, CM084278_1_20701460.0, CM084272_1_18193991.0, CM084274_1_4769088.0, CM084273_1_10424351.0, CM084274_1_3691337.0, CM084268_1_28845522.1, CM084275_1_39502454.1, CM084264_1_66522465.0, CM084268_1_24031324.1, CM084265_1_72368299.1, CM084274_1_4795062.1, CM084267_1_51248425.0, CM084266_1_68919260.1",30,"adapter_trim.F1-B20-pH8.bam",-0.19,"adapter_trim.F1-B8-pH8.bam",-0.42,0.61 +"47","adapter_trim.F2-B11-pH8.bam","CM084269_1_43528607.1, CM084264_1_75506833.0, CM084266_1_69793914.0, CM084264_1_70190068.0, CM084274_1_4694263.1, CM084275_1_19996655.0, CM084267_1_6421475.1, CM084266_1_57885157.1, CM084265_1_68869208.1, CM084275_1_675849.1, CM084278_1_32252684.0, CM084278_1_20600197.1, CM084271_1_19934424.1, CM084267_1_30270830.0, CM084269_1_15823423.1, CM084266_1_52832550.1, CM084271_1_344406.0, CM084278_1_20701460.0, CM084272_1_18193991.0, CM084274_1_4769088.0, CM084273_1_10424351.0, CM084274_1_3691337.0, CM084268_1_28845522.1, CM084275_1_39502454.1, CM084264_1_66522465.0, CM084268_1_24031324.1, CM084265_1_72368299.1, CM084274_1_4795062.1, CM084267_1_51248425.0, CM084266_1_68919260.1",30,"adapter_trim.F1-B20-pH8.bam",-0.35,"adapter_trim.F1-B8-pH8.bam",-0.45,0.8 +"48","adapter_trim.F2-B13-pH8.bam","CM084269_1_43528607.1, CM084264_1_75506833.0, CM084266_1_69793914.0, CM084264_1_70190068.0, CM084274_1_4694263.1, CM084275_1_19996655.0, CM084267_1_6421475.1, CM084266_1_57885157.1, CM084265_1_68869208.1, CM084275_1_675849.1, CM084278_1_32252684.0, CM084278_1_20600197.1, CM084271_1_19934424.1, CM084267_1_30270830.0, CM084269_1_15823423.1, CM084266_1_52832550.1, CM084271_1_344406.0, CM084278_1_20701460.0, CM084272_1_18193991.0, CM084274_1_4769088.0, CM084273_1_10424351.0, CM084274_1_3691337.0, CM084268_1_28845522.1, CM084275_1_39502454.1, CM084264_1_66522465.0, CM084268_1_24031324.1, CM084265_1_72368299.1, CM084274_1_4795062.1, CM084267_1_51248425.0, CM084266_1_68919260.1",30,"adapter_trim.F1-B25-pH8.bam",-0.07,"adapter_trim.F1-B7-pH8.bam",-0.65,0.72 +"49","adapter_trim.F2-B16-pH8.bam","CM084269_1_43528607.1, CM084264_1_75506833.0, CM084266_1_69793914.0, CM084264_1_70190068.0, CM084274_1_4694263.1, CM084275_1_19996655.0, CM084267_1_6421475.1, CM084266_1_57885157.1, CM084265_1_68869208.1, CM084275_1_675849.1, CM084278_1_32252684.0, CM084278_1_20600197.1, CM084271_1_19934424.1, CM084267_1_30270830.0, CM084269_1_15823423.1, CM084266_1_52832550.1, CM084271_1_344406.0, CM084278_1_20701460.0, CM084272_1_18193991.0, CM084274_1_4769088.0, CM084273_1_10424351.0, CM084274_1_3691337.0, CM084268_1_28845522.1, CM084275_1_39502454.1, CM084264_1_66522465.0, CM084268_1_24031324.1, CM084265_1_72368299.1, CM084274_1_4795062.1, CM084267_1_51248425.0, CM084266_1_68919260.1",30,"adapter_trim.F1-B20-pH8.bam",-0.26,"adapter_trim.F1-B8-pH8.bam",-0.39,0.65 +"50","adapter_trim.F2-B5-pH8.bam","CM084269_1_43528607.1, CM084264_1_75506833.0, CM084266_1_69793914.0, CM084264_1_70190068.0, CM084274_1_4694263.1, CM084275_1_19996655.0, CM084267_1_6421475.1, CM084266_1_57885157.1, CM084265_1_68869208.1, CM084275_1_675849.1, CM084278_1_32252684.0, CM084278_1_20600197.1, CM084271_1_19934424.1, CM084267_1_30270830.0, CM084269_1_15823423.1, CM084266_1_52832550.1, CM084271_1_344406.0, CM084278_1_20701460.0, CM084272_1_18193991.0, CM084274_1_4769088.0, CM084273_1_10424351.0, CM084274_1_3691337.0, CM084268_1_28845522.1, CM084275_1_39502454.1, CM084264_1_66522465.0, CM084268_1_24031324.1, CM084265_1_72368299.1, CM084274_1_4795062.1, CM084267_1_51248425.0, CM084266_1_68919260.1",30,"adapter_trim.F1-B25-pH8.bam",-0.36,"adapter_trim.F1-B5-pH8.bam",-0.78,1.14 +"51","adapter_trim.F2-B8-pH8.bam","CM084269_1_43528607.1, CM084264_1_75506833.0, CM084266_1_69793914.0, CM084264_1_70190068.0, CM084274_1_4694263.1, CM084275_1_19996655.0, CM084267_1_6421475.1, CM084266_1_57885157.1, CM084265_1_68869208.1, CM084275_1_675849.1, CM084278_1_32252684.0, CM084278_1_20600197.1, CM084271_1_19934424.1, CM084267_1_30270830.0, CM084269_1_15823423.1, CM084266_1_52832550.1, CM084271_1_344406.0, CM084278_1_20701460.0, CM084272_1_18193991.0, CM084274_1_4769088.0, CM084273_1_10424351.0, CM084274_1_3691337.0, CM084268_1_28845522.1, CM084275_1_39502454.1, CM084264_1_66522465.0, CM084268_1_24031324.1, CM084265_1_72368299.1, CM084274_1_4795062.1, CM084267_1_51248425.0, CM084266_1_68919260.1",30,"adapter_trim.F1-B25-pH8.bam",0.04,"adapter_trim.F1-B8-pH8.bam",-0.2,0.24 +"52","adapter_trim.F2-J126-pH8.bam","CM084275_1_39394528.1, CM084265_1_71831292.0, CM084269_1_40338566.0, CM084268_1_50681648.1, CM084264_1_74191573.0, CM084276_1_38559639.1, CM084277_1_28144351.0, CM084269_1_43525116.1, CM084277_1_1868381.1, CM084266_1_23321836.0, CM084266_1_68200825.1, CM084275_1_35722063.1, CM084270_1_1559641.0, CM084276_1_25809477.1, CM084268_1_3699577.1, CM084279_1_32652116.1, CM084272_1_43469474.0, CM084278_1_15228737.1, CM084275_1_39502454.1, CM084274_1_4694202.1, CM084266_1_71160169.0, CM084268_1_18519471.0, CM084265_1_8361562.0, CM084276_1_1856066.1, CM084264_1_70182851.0, CM084275_1_25393416.1, CM084266_1_62468799.0, CM084271_1_44070252.1, CM084275_1_529161.0, CM084264_1_72011634.1",30,"adapter_trim.F1-B15-pH8.bam",-0.35,"adapter_trim.F1-B7-pH8.bam",-0.2,0.55 +"53","adapter_trim.F2-J143-pH8.bam","CM084275_1_39394528.1, CM084265_1_71831292.0, CM084269_1_40338566.0, CM084268_1_50681648.1, CM084264_1_74191573.0, CM084276_1_38559639.1, CM084277_1_28144351.0, CM084269_1_43525116.1, CM084277_1_1868381.1, CM084266_1_23321836.0, CM084266_1_68200825.1, CM084275_1_35722063.1, CM084270_1_1559641.0, CM084276_1_25809477.1, CM084268_1_3699577.1, CM084279_1_32652116.1, CM084272_1_43469474.0, CM084278_1_15228737.1, CM084275_1_39502454.1, CM084274_1_4694202.1, CM084266_1_71160169.0, CM084268_1_18519471.0, CM084265_1_8361562.0, CM084276_1_1856066.1, CM084264_1_70182851.0, CM084275_1_25393416.1, CM084266_1_62468799.0, CM084271_1_44070252.1, CM084275_1_529161.0, CM084264_1_72011634.1",30,"adapter_trim.F1-B21-pH8.bam",-0.31,"adapter_trim.F1-B7-pH8.bam",-0.24,0.55 +"54","adapter_trim.F2-B16-pH8.bam","CM084275_1_39394528.1, CM084265_1_71831292.0, CM084269_1_40338566.0, CM084268_1_50681648.1, CM084264_1_74191573.0, CM084276_1_38559639.1, CM084277_1_28144351.0, CM084269_1_43525116.1, CM084277_1_1868381.1, CM084266_1_23321836.0, CM084266_1_68200825.1, CM084275_1_35722063.1, CM084270_1_1559641.0, CM084276_1_25809477.1, CM084268_1_3699577.1, CM084279_1_32652116.1, CM084272_1_43469474.0, CM084278_1_15228737.1, CM084275_1_39502454.1, CM084274_1_4694202.1, CM084266_1_71160169.0, CM084268_1_18519471.0, CM084265_1_8361562.0, CM084276_1_1856066.1, CM084264_1_70182851.0, CM084275_1_25393416.1, CM084266_1_62468799.0, CM084271_1_44070252.1, CM084275_1_529161.0, CM084264_1_72011634.1",30,"adapter_trim.F1-B25-pH8.bam",-0.22,"adapter_trim.F1-B11-pH8.bam",-0.46,0.68 +"55","adapter_trim.F2-B3-pH8.bam","CM084277_1_30168106.0, CM084265_1_69007603.0, CM084275_1_25388576.0, CM084274_1_4862951.0, CM084275_1_39781020.0, CM084266_1_59364074.1, CM084264_1_74721232.0, CM084271_1_43817223.1, CM084268_1_50219227.1, CM084274_1_4694522.1, CM084264_1_72929492.1, CM084271_1_3814120.1, CM084278_1_23540722.1, CM084271_1_344406.0, CM084270_1_4921025.0, CM084265_1_794840.0, CM084272_1_33453891.0, CM084264_1_73152528.1, CM084264_1_72117233.0, CM084274_1_4863048.0, CM084271_1_37240198.0, CM084274_1_4869897.0, CM084272_1_43469575.0, CM084268_1_50224889.0, CM084270_1_8444546.0, CM084269_1_41819713.0, CM084272_1_18553681.0, CM084272_1_1584317.0, CM084273_1_42285577.0, CM084274_1_4778609.0",30,"adapter_trim.F1-B25-pH8.bam",-0.19,"adapter_trim.F1-B3-pH8.bam",-0.12,0.31 +"56","adapter_trim.F2-B11-pH8.bam","CM084265_1_64735166.0, CM084268_1_3691160.1, CM084274_1_4708748.1, CM084264_1_66439628.1, CM084269_1_41809360.0, CM084264_1_70182858.1, CM084279_1_32673936.1, CM084274_1_4708735.0, CM084267_1_30270830.0, CM084266_1_70400406.0, CM084279_1_31409578.1, CM084266_1_23321803.0, CM084275_1_40706324.1, CM084271_1_3821269.0, CM084264_1_73309412.1, CM084268_1_28845782.0, CM084265_1_71796317.0, CM084267_1_51919009.1, CM084274_1_4778496.1, CM084277_1_30953033.0, CM084264_1_74076720.0, CM084266_1_66832562.1, CM084272_1_18192676.1, CM084268_1_28851913.1, CM084264_1_69902275.0, CM084274_1_4734039.0, CM084266_1_58086170.1, CM084266_1_50301524.1, CM084269_1_42862704.1, CM084266_1_68960355.1",30,"adapter_trim.F1-B21-pH8.bam",-0.22,"adapter_trim.F1-B10-pH8.bam",-0.15,0.37 +"57","adapter_trim.F2-J142-pH8.bam","CM084265_1_64196855.1, CM084273_1_214008.1, CM084278_1_22657588.0, CM084277_1_29780644.0, CM084267_1_5165693.1, CM084265_1_58530104.1, CM084266_1_70530691.0, CM084267_1_51242798.1, CM084272_1_33607000.1, CM084265_1_71795197.1, CM084266_1_46766313.0, CM084277_1_30027552.0, CM084264_1_69271984.0, CM084276_1_38775924.0, CM084268_1_49721957.0, CM084266_1_50301553.0, CM084271_1_26325720.1, CM084278_1_23542095.1, CM084272_1_29972645.1, CM084271_1_344606.0, CM084269_1_35627230.1, CM084276_1_25809541.0, CM084264_1_64269877.0, CM084272_1_1596807.0, CM084277_1_36521175.1, CM084273_1_31864457.0, CM084275_1_19996650.1, CM084277_1_30953078.0, CM084279_1_32666410.0, CM084276_1_37987468.0",30,"adapter_trim.F1-B8-pH8.bam",-0.11,"adapter_trim.F1-B7-pH8.bam",-0.33,0.44 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CM084277_1_10628755.0, CM084279_1_33759516.1, CM084264_1_70190075.0, CM084272_1_33597658.1, CM084268_1_273292.0, CM084265_1_73060663.0, CM084271_1_43547024.1, CM084273_1_31863606.0, CM084276_1_935739.0, CM084269_1_15798323.1, CM084268_1_3261991.0, CM084269_1_15812959.1, CM084265_1_72368299.0, CM084277_1_5804551.0, CM084274_1_42859635.1, CM084272_1_33453618.0, CM084271_1_3819548.1, CM084273_1_32683023.0, CM084269_1_15823954.0, CM084276_1_20157071.1, CM084278_1_16767343.0, CM084272_1_2072764.0, CM084278_1_23536923.1, CM084275_1_25393416.1, CM084268_1_28845782.1, CM084269_1_15812959.0, CM084274_1_5566177.0, CM084267_1_9175848.1",30,"adapter_trim.F1-B20-pH8.bam",-0.21,"adapter_trim.F1-B5-pH8.bam",-0.33,0.54 +"75","adapter_trim.F2-B1-pH8.bam","CM084274_1_4795062.1, CM084268_1_3710137.0, CM084267_1_52092644.0, CM084277_1_5803945.1, CM084272_1_33453681.1, CM084275_1_25397320.1, CM084264_1_70173615.1, CM084264_1_75278300.1, CM084270_1_46587607.1, CM084274_1_4674050.0, CM084278_1_22657612.1, CM084272_1_1311984.1, CM084268_1_2706209.1, CM084274_1_4785921.1, CM084277_1_36521175.0, CM084264_1_73311149.1, CM084274_1_4795112.0, CM084278_1_22665042.0, CM084264_1_73926180.0, CM084269_1_1556175.0, CM084278_1_281238.0, CM084279_1_1070264.0, CM084265_1_61648709.1, CM084273_1_31863691.0, CM084272_1_43469474.0, CM084275_1_25388888.1, CM084271_1_44090328.1, CM084269_1_47265482.0, CM084276_1_1849333.1, CM084272_1_1894276.1",30,"adapter_trim.F1-B21-pH8.bam",-0.29,"adapter_trim.F1-B9-pH8.bam",-0.15,0.44 +"76","adapter_trim.F2-B13-pH8.bam","CM084275_1_25393709.0, CM084266_1_71149023.1, CM084269_1_15823421.0, CM084276_1_38559646.1, CM084265_1_71827811.0, CM084266_1_57888742.1, CM084264_1_70188213.1, CM084269_1_46692099.0, CM084268_1_18519472.0, CM084266_1_69547380.1, CM084272_1_29973150.1, CM084274_1_5566177.0, CM084275_1_39776469.0, CM084274_1_4723647.0, CM084279_1_1064676.1, CM084266_1_71224927.0, CM084274_1_4773495.0, CM084266_1_64726664.0, CM084276_1_1847305.1, CM084267_1_3748455.0, CM084274_1_4695098.0, CM084273_1_42294202.0, CM084268_1_4026799.1, CM084273_1_42285391.0, CM084266_1_61737001.0, CM084266_1_57885009.0, CM084264_1_34293018.1, CM084275_1_38169321.0, CM084266_1_58111750.0, CM084269_1_45420483.1",30,"adapter_trim.F1-B8-pH8.bam",-0.68,"adapter_trim.F1-B1-pH8.bam",-0.4,1.08 +"77","adapter_trim.F2-J127-pH8.bam","CM084266_1_57882573.1, CM084275_1_272975.1, CM084275_1_35720341.0, CM084268_1_50681646.0, CM084271_1_337322.1, CM084277_1_30953033.0, CM084265_1_72071374.0, CM084266_1_23296704.0, CM084271_1_3807705.1, CM084267_1_52593733.0, CM084276_1_38558690.0, CM084275_1_25393266.0, CM084268_1_28851913.0, CM084268_1_50225017.1, CM084268_1_28845782.1, CM084264_1_34293018.1, CM084265_1_68074267.1, CM084268_1_24031324.1, CM084270_1_42348998.0, CM084265_1_68806425.1, CM084264_1_34294476.1, CM084267_1_11257244.1, CM084276_1_25809361.1, CM084274_1_3691337.1, CM084279_1_32673936.1, CM084264_1_69298657.0, CM084265_1_68798193.0, CM084264_1_15073604.0, CM084274_1_4796871.0, CM084279_1_31073068.1",30,"adapter_trim.F1-B21-pH8.bam",0,"adapter_trim.F1-B5-pH8.bam",-0.48,0.48 +"78","adapter_trim.F2-J146-pH8.bam","CM084266_1_57882573.1, CM084275_1_272975.1, CM084275_1_35720341.0, CM084268_1_50681646.0, CM084271_1_337322.1, CM084277_1_30953033.0, CM084265_1_72071374.0, CM084266_1_23296704.0, CM084271_1_3807705.1, CM084267_1_52593733.0, CM084276_1_38558690.0, CM084275_1_25393266.0, CM084268_1_28851913.0, CM084268_1_50225017.1, CM084268_1_28845782.1, CM084264_1_34293018.1, CM084265_1_68074267.1, CM084268_1_24031324.1, CM084270_1_42348998.0, CM084265_1_68806425.1, CM084264_1_34294476.1, CM084267_1_11257244.1, CM084276_1_25809361.1, CM084274_1_3691337.1, CM084279_1_32673936.1, CM084264_1_69298657.0, CM084265_1_68798193.0, CM084264_1_15073604.0, CM084274_1_4796871.0, CM084279_1_31073068.1",30,"adapter_trim.F1-B25-pH8.bam",-0.05,"adapter_trim.F1-B8-pH8.bam",-0.36,0.41 +"79","adapter_trim.F2-B1-pH8.bam","CM084266_1_57882573.1, CM084275_1_272975.1, CM084275_1_35720341.0, CM084268_1_50681646.0, CM084271_1_337322.1, CM084277_1_30953033.0, CM084265_1_72071374.0, CM084266_1_23296704.0, CM084271_1_3807705.1, CM084267_1_52593733.0, CM084276_1_38558690.0, CM084275_1_25393266.0, CM084268_1_28851913.0, CM084268_1_50225017.1, CM084268_1_28845782.1, CM084264_1_34293018.1, CM084265_1_68074267.1, CM084268_1_24031324.1, CM084270_1_42348998.0, CM084265_1_68806425.1, CM084264_1_34294476.1, CM084267_1_11257244.1, CM084276_1_25809361.1, CM084274_1_3691337.1, CM084279_1_32673936.1, CM084264_1_69298657.0, CM084265_1_68798193.0, CM084264_1_15073604.0, CM084274_1_4796871.0, CM084279_1_31073068.1",30,"adapter_trim.F1-B21-pH8.bam",-0.22,"adapter_trim.F1-B4-pH8.bam",-0.25,0.47 +"80","adapter_trim.F2-J127-pH8.bam","CM084266_1_23317745.1, CM084277_1_4875899.0, CM084275_1_327388.0, CM084265_1_70595157.1, CM084276_1_935645.1, CM084274_1_4708745.0, CM084273_1_32698906.0, CM084264_1_73927104.1, CM084264_1_69682047.1, CM084266_1_69085559.1, CM084269_1_46692120.1, CM084264_1_69539449.0, CM084279_1_161458.0, CM084266_1_63195133.1, CM084277_1_6198938.1, CM084269_1_43525189.1, CM084269_1_39736980.1, CM084264_1_73604686.1, CM084269_1_1577700.0, CM084268_1_3692649.1, CM084272_1_1891451.1, CM084271_1_43339301.1, CM084267_1_6421227.0, CM084274_1_4694263.0, CM084268_1_3695238.1, CM084278_1_19960942.0, CM084265_1_19672164.1, CM084276_1_38096618.0, CM084274_1_4864682.0, CM084265_1_71925203.1",30,"adapter_trim.F1-B25-pH8.bam",0.02,"adapter_trim.F1-B5-pH8.bam",-0.35,0.37 +"81","adapter_trim.F2-J86-pH8.bam","CM084272_1_1311984.0, CM084264_1_2737868.1, CM084264_1_68688357.1, CM084272_1_1894347.0, CM084266_1_57888961.0, CM084271_1_43868189.1, CM084274_1_4864709.0, CM084266_1_65993526.0, CM084267_1_699277.0, CM084278_1_22664889.0, CM084276_1_38772810.1, CM084269_1_45420488.0, CM084270_1_42345710.0, CM084275_1_524597.0, CM084276_1_7202888.0, CM084264_1_73926177.1, CM084271_1_19655820.0, CM084269_1_4636404.1, CM084277_1_5803945.0, CM084273_1_32698908.0, CM084270_1_32126731.1, CM084275_1_39776618.0, CM084265_1_70607188.0, CM084274_1_4869825.1, CM084275_1_25395524.0, CM084269_1_41809356.1, CM084265_1_59221281.1, CM084275_1_39780930.1, CM084264_1_2740173.1, CM084273_1_31863691.0",30,"adapter_trim.F1-B21-pH8.bam",-0.5,"adapter_trim.F1-B3-pH8.bam",-0.31,0.81 +"82","adapter_trim.F2-B23-pH8.bam","CM084272_1_1311984.0, CM084264_1_2737868.1, CM084264_1_68688357.1, CM084272_1_1894347.0, CM084266_1_57888961.0, CM084271_1_43868189.1, CM084274_1_4864709.0, CM084266_1_65993526.0, CM084267_1_699277.0, CM084278_1_22664889.0, CM084276_1_38772810.1, CM084269_1_45420488.0, CM084270_1_42345710.0, CM084275_1_524597.0, CM084276_1_7202888.0, CM084264_1_73926177.1, CM084271_1_19655820.0, CM084269_1_4636404.1, CM084277_1_5803945.0, CM084273_1_32698908.0, CM084270_1_32126731.1, CM084275_1_39776618.0, CM084265_1_70607188.0, CM084274_1_4869825.1, CM084275_1_25395524.0, CM084269_1_41809356.1, CM084265_1_59221281.1, CM084275_1_39780930.1, CM084264_1_2740173.1, CM084273_1_31863691.0",30,"adapter_trim.F1-B8-pH8.bam",-0.51,"adapter_trim.F1-B1-pH8.bam",-0.31,0.82 +"83","adapter_trim.F2-J105-pH8.bam","CM084278_1_30230906.1, CM084275_1_25397304.1, CM084273_1_11263082.1, CM084267_1_5881718.1, CM084265_1_70980049.1, CM084266_1_70706238.1, CM084278_1_22644846.0, CM084268_1_22040366.1, CM084271_1_37240204.0, CM084279_1_1072380.0, CM084266_1_71148891.1, CM084269_1_15812958.1, CM084271_1_26324168.0, CM084264_1_61167189.1, CM084276_1_1856932.0, CM084266_1_68919241.1, CM084266_1_59802321.1, CM084277_1_29208392.1, CM084274_1_4796888.1, CM084271_1_44105575.1, CM084276_1_38072621.1, CM084270_1_46589386.0, CM084271_1_344493.0, CM084277_1_29208301.0, CM084264_1_72011613.0, CM084276_1_25809477.0, CM084271_1_39685141.0, CM084279_1_1512885.1, CM084273_1_42252907.0, CM084264_1_74721329.0",30,"adapter_trim.F1-B8-pH8.bam",-0.09,"adapter_trim.F1-B9-pH8.bam",-0.07,0.16 +"84","adapter_trim.F2-J122-pH8.bam","CM084278_1_30230906.1, CM084275_1_25397304.1, CM084273_1_11263082.1, CM084267_1_5881718.1, CM084265_1_70980049.1, CM084266_1_70706238.1, CM084278_1_22644846.0, CM084268_1_22040366.1, CM084271_1_37240204.0, CM084279_1_1072380.0, CM084266_1_71148891.1, CM084269_1_15812958.1, CM084271_1_26324168.0, CM084264_1_61167189.1, CM084276_1_1856932.0, CM084266_1_68919241.1, CM084266_1_59802321.1, CM084277_1_29208392.1, CM084274_1_4796888.1, CM084271_1_44105575.1, CM084276_1_38072621.1, CM084270_1_46589386.0, CM084271_1_344493.0, CM084277_1_29208301.0, CM084264_1_72011613.0, CM084276_1_25809477.0, CM084271_1_39685141.0, CM084279_1_1512885.1, CM084273_1_42252907.0, CM084264_1_74721329.0",30,"adapter_trim.F1-B15-pH8.bam",-0.41,"adapter_trim.F1-B1-pH8.bam",-0.38,0.79 +"85","adapter_trim.F2-J83-pH8.bam","CM084278_1_30230906.1, CM084275_1_25397304.1, CM084273_1_11263082.1, CM084267_1_5881718.1, CM084265_1_70980049.1, CM084266_1_70706238.1, CM084278_1_22644846.0, CM084268_1_22040366.1, CM084271_1_37240204.0, CM084279_1_1072380.0, CM084266_1_71148891.1, CM084269_1_15812958.1, CM084271_1_26324168.0, CM084264_1_61167189.1, CM084276_1_1856932.0, CM084266_1_68919241.1, CM084266_1_59802321.1, CM084277_1_29208392.1, CM084274_1_4796888.1, CM084271_1_44105575.1, CM084276_1_38072621.1, CM084270_1_46589386.0, CM084271_1_344493.0, CM084277_1_29208301.0, CM084264_1_72011613.0, CM084276_1_25809477.0, CM084271_1_39685141.0, CM084279_1_1512885.1, CM084273_1_42252907.0, CM084264_1_74721329.0",30,"adapter_trim.F1-B21-pH8.bam",-0.28,"adapter_trim.F1-B4-pH8.bam",-0.08,0.36 +"86","adapter_trim.F2-J143-pH8.bam","CM084271_1_43851366.0, CM084269_1_42862718.0, CM084265_1_71265269.0, CM084264_1_73312740.0, CM084266_1_816291.1, CM084264_1_75512053.1, CM084277_1_31296163.1, CM084266_1_68319456.1, CM084275_1_39491731.0, CM084268_1_3704024.0, CM084266_1_59802412.0, CM084271_1_340894.1, CM084270_1_4920918.1, CM084265_1_39553345.0, CM084265_1_68525973.0, CM084274_1_4864682.0, CM084266_1_57889035.0, CM084269_1_1544433.1, CM084268_1_9292527.1, CM084271_1_379028.0, CM084277_1_30611511.1, CM084272_1_33606995.0, CM084276_1_38785557.0, CM084266_1_71166433.0, CM084266_1_70706208.0, CM084276_1_38797638.0, CM084272_1_1891434.0, CM084269_1_4628639.1, CM084265_1_65204740.1, CM084271_1_379038.1",30,"adapter_trim.F1-B8-pH8.bam",-0.17,"adapter_trim.F1-B7-pH8.bam",-0.03,0.2 +"87","adapter_trim.F2-B11-pH8.bam","CM084271_1_43851366.0, CM084269_1_42862718.0, CM084265_1_71265269.0, CM084264_1_73312740.0, CM084266_1_816291.1, CM084264_1_75512053.1, CM084277_1_31296163.1, CM084266_1_68319456.1, CM084275_1_39491731.0, CM084268_1_3704024.0, CM084266_1_59802412.0, CM084271_1_340894.1, CM084270_1_4920918.1, CM084265_1_39553345.0, CM084265_1_68525973.0, CM084274_1_4864682.0, CM084266_1_57889035.0, CM084269_1_1544433.1, CM084268_1_9292527.1, CM084271_1_379028.0, CM084277_1_30611511.1, CM084272_1_33606995.0, CM084276_1_38785557.0, CM084266_1_71166433.0, CM084266_1_70706208.0, CM084276_1_38797638.0, CM084272_1_1891434.0, 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CM084276_1_1625257.0, CM084266_1_70706238.1, CM084266_1_38532344.1, CM084266_1_57888563.1, CM084270_1_42355508.1, CM084275_1_120888.1, CM084275_1_35719388.0, CM084274_1_21938486.0, CM084267_1_5165677.0, CM084271_1_43546299.0, CM084267_1_51346515.0, CM084275_1_39338236.0, CM084266_1_69141150.1, CM084274_1_3692385.0, CM084265_1_3130640.0, CM084267_1_5165711.1, CM084275_1_77171.1, CM084279_1_10156984.0, CM084271_1_44091708.1, CM084268_1_50216562.0",30,"adapter_trim.F1-B15-pH8.bam",-0.3,"adapter_trim.F1-B7-pH8.bam",-0.44,0.74 +"91","adapter_trim.F2-J85-pH8.bam","CM084271_1_43868201.0, CM084266_1_68319456.0, CM084275_1_35717364.0, CM084265_1_1816564.0, CM084267_1_13261420.1, CM084265_1_70979988.0, CM084270_1_47077465.1, CM084267_1_11257260.0, CM084274_1_4863872.1, CM084265_1_70800987.1, CM084276_1_1625257.0, CM084266_1_70706238.1, CM084266_1_38532344.1, CM084266_1_57888563.1, CM084270_1_42355508.1, CM084275_1_120888.1, CM084275_1_35719388.0, CM084274_1_21938486.0, CM084267_1_5165677.0, CM084271_1_43546299.0, CM084267_1_51346515.0, CM084275_1_39338236.0, CM084266_1_69141150.1, CM084274_1_3692385.0, CM084265_1_3130640.0, CM084267_1_5165711.1, CM084275_1_77171.1, CM084279_1_10156984.0, CM084271_1_44091708.1, CM084268_1_50216562.0",30,"adapter_trim.F1-B15-pH8.bam",-0.17,"adapter_trim.F1-B1-pH8.bam",-0.09,0.26 +"92","adapter_trim.F2-J89-pH8.bam","CM084271_1_43868201.0, CM084266_1_68319456.0, CM084275_1_35717364.0, CM084265_1_1816564.0, CM084267_1_13261420.1, CM084265_1_70979988.0, CM084270_1_47077465.1, CM084267_1_11257260.0, CM084274_1_4863872.1, CM084265_1_70800987.1, CM084276_1_1625257.0, CM084266_1_70706238.1, CM084266_1_38532344.1, CM084266_1_57888563.1, CM084270_1_42355508.1, CM084275_1_120888.1, CM084275_1_35719388.0, CM084274_1_21938486.0, CM084267_1_5165677.0, CM084271_1_43546299.0, CM084267_1_51346515.0, CM084275_1_39338236.0, CM084266_1_69141150.1, CM084274_1_3692385.0, CM084265_1_3130640.0, CM084267_1_5165711.1, CM084275_1_77171.1, CM084279_1_10156984.0, CM084271_1_44091708.1, CM084268_1_50216562.0",30,"adapter_trim.F1-B25-pH8.bam",-0.37,"adapter_trim.F1-B8-pH8.bam",0.12,0.49 +"93","adapter_trim.F2-J126-pH8.bam","CM084278_1_23542095.0, CM084276_1_62244.0, CM084267_1_5952857.1, CM084269_1_1544433.1, CM084266_1_70400406.1, CM084264_1_72075482.1, CM084266_1_68478650.0, CM084266_1_57888563.0, CM084266_1_68960355.1, CM084275_1_39420927.0, CM084269_1_40451676.1, CM084276_1_12383618.0, CM084269_1_15817354.1, CM084276_1_38539465.0, CM084266_1_64725843.0, CM084268_1_45613.0, CM084275_1_1304711.1, CM084275_1_35720350.1, CM084265_1_70798989.1, CM084270_1_46588177.0, CM084271_1_44134607.1, CM084274_1_3691763.0, CM084264_1_61167131.1, CM084275_1_20000958.1, CM084276_1_1625423.1, CM084264_1_75506833.0, CM084264_1_74721244.1, CM084269_1_4636406.0, CM084264_1_72011634.0, CM084269_1_43525341.0",30,"adapter_trim.F1-B20-pH8.bam",-0.05,"adapter_trim.F1-B11-pH8.bam",-0.3,0.35 +"94","adapter_trim.F2-J127-pH8.bam","CM084278_1_23542095.0, CM084276_1_62244.0, CM084267_1_5952857.1, CM084269_1_1544433.1, CM084266_1_70400406.1, CM084264_1_72075482.1, CM084266_1_68478650.0, CM084266_1_57888563.0, CM084266_1_68960355.1, CM084275_1_39420927.0, CM084269_1_40451676.1, CM084276_1_12383618.0, CM084269_1_15817354.1, CM084276_1_38539465.0, CM084266_1_64725843.0, CM084268_1_45613.0, CM084275_1_1304711.1, CM084275_1_35720350.1, CM084265_1_70798989.1, CM084270_1_46588177.0, CM084271_1_44134607.1, CM084274_1_3691763.0, CM084264_1_61167131.1, CM084275_1_20000958.1, CM084276_1_1625423.1, CM084264_1_75506833.0, CM084264_1_74721244.1, CM084269_1_4636406.0, CM084264_1_72011634.0, CM084269_1_43525341.0",30,"adapter_trim.F1-B25-pH8.bam",-0.41,"adapter_trim.F1-B9-pH8.bam",-0.03,0.44 +"95","adapter_trim.F2-J141-pH8.bam","CM084278_1_23542095.0, CM084276_1_62244.0, CM084267_1_5952857.1, CM084269_1_1544433.1, CM084266_1_70400406.1, CM084264_1_72075482.1, CM084266_1_68478650.0, CM084266_1_57888563.0, CM084266_1_68960355.1, CM084275_1_39420927.0, CM084269_1_40451676.1, CM084276_1_12383618.0, CM084269_1_15817354.1, CM084276_1_38539465.0, CM084266_1_64725843.0, CM084268_1_45613.0, CM084275_1_1304711.1, CM084275_1_35720350.1, CM084265_1_70798989.1, CM084270_1_46588177.0, CM084271_1_44134607.1, CM084274_1_3691763.0, CM084264_1_61167131.1, CM084275_1_20000958.1, CM084276_1_1625423.1, CM084264_1_75506833.0, CM084264_1_74721244.1, CM084269_1_4636406.0, CM084264_1_72011634.0, CM084269_1_43525341.0",30,"adapter_trim.F1-B25-pH8.bam",-0.07,"adapter_trim.F1-B8-pH8.bam",-0.25,0.32 +"96","adapter_trim.F2-B11-pH8.bam","CM084278_1_23542095.0, CM084276_1_62244.0, CM084267_1_5952857.1, CM084269_1_1544433.1, CM084266_1_70400406.1, CM084264_1_72075482.1, CM084266_1_68478650.0, CM084266_1_57888563.0, CM084266_1_68960355.1, CM084275_1_39420927.0, CM084269_1_40451676.1, CM084276_1_12383618.0, CM084269_1_15817354.1, CM084276_1_38539465.0, CM084266_1_64725843.0, CM084268_1_45613.0, CM084275_1_1304711.1, CM084275_1_35720350.1, CM084265_1_70798989.1, CM084270_1_46588177.0, CM084271_1_44134607.1, CM084274_1_3691763.0, CM084264_1_61167131.1, CM084275_1_20000958.1, CM084276_1_1625423.1, CM084264_1_75506833.0, CM084264_1_74721244.1, CM084269_1_4636406.0, CM084264_1_72011634.0, CM084269_1_43525341.0",30,"adapter_trim.F1-B15-pH8.bam",-0.44,"adapter_trim.F1-B11-pH8.bam",-0.37,0.81 +"97","adapter_trim.F2-J104-pH8.bam","CM084274_1_4869968.0, CM084270_1_4751817.1, CM084274_1_4709671.1, CM084266_1_57885157.0, CM084266_1_70743740.1, CM084269_1_1558064.0, CM084279_1_32649961.1, CM084279_1_993504.0, CM084278_1_15228737.1, CM084266_1_63468218.1, CM084268_1_3699701.0, CM084279_1_1064677.1, CM084265_1_786811.0, CM084265_1_8361584.0, CM084274_1_4792351.1, CM084268_1_28845336.1, CM084271_1_43860460.1, CM084273_1_42253159.0, CM084264_1_66522465.0, CM084270_1_4920904.1, CM084265_1_60316111.1, CM084279_1_16586112.1, CM084264_1_66525874.1, CM084274_1_4694263.0, CM084268_1_3704024.1, CM084269_1_43525341.1, CM084267_1_8118654.1, CM084271_1_19655909.0, CM084274_1_4773486.1, CM084265_1_72992174.0",30,"adapter_trim.F1-B15-pH8.bam",0.03,"adapter_trim.F1-B10-pH8.bam",-0.23,0.26 +"98","adapter_trim.F2-B11-pH8.bam","CM084274_1_4869968.0, CM084270_1_4751817.1, CM084274_1_4709671.1, CM084266_1_57885157.0, CM084266_1_70743740.1, CM084269_1_1558064.0, CM084279_1_32649961.1, CM084279_1_993504.0, CM084278_1_15228737.1, CM084266_1_63468218.1, CM084268_1_3699701.0, CM084279_1_1064677.1, CM084265_1_786811.0, CM084265_1_8361584.0, CM084274_1_4792351.1, CM084268_1_28845336.1, CM084271_1_43860460.1, CM084273_1_42253159.0, CM084264_1_66522465.0, CM084270_1_4920904.1, CM084265_1_60316111.1, CM084279_1_16586112.1, CM084264_1_66525874.1, CM084274_1_4694263.0, CM084268_1_3704024.1, CM084269_1_43525341.1, CM084267_1_8118654.1, CM084271_1_19655909.0, CM084274_1_4773486.1, CM084265_1_72992174.0",30,"adapter_trim.F1-B8-pH8.bam",-0.31,"adapter_trim.F1-B3-pH8.bam",-0.22,0.53 +"99","adapter_trim.F2-J104-pH8.bam","CM084267_1_13231056.1, CM084264_1_70355122.0, CM084271_1_43934411.0, CM084272_1_33454573.1, CM084264_1_69275359.1, CM084265_1_66143662.1, CM084278_1_31960704.0, CM084273_1_21179270.1, CM084271_1_44077341.1, CM084264_1_70471433.0, CM084274_1_4773546.0, CM084270_1_42355495.1, CM084278_1_22664889.0, CM084270_1_47077463.0, CM084270_1_4920904.1, CM084274_1_4785935.1, CM084276_1_11709759.0, CM084265_1_70577871.0, CM084268_1_1508040.1, CM084278_1_8558506.1, CM084276_1_20157216.0, CM084267_1_51248426.1, CM084278_1_28652016.0, CM084277_1_18546604.0, CM084268_1_3704020.0, CM084277_1_28144351.0, CM084266_1_68919241.1, CM084274_1_4694551.0, CM084266_1_64164372.0, CM084273_1_42253133.0",30,"adapter_trim.F1-B21-pH8.bam",-0.34,"adapter_trim.F1-B1-pH8.bam",-0.36,0.7 +"100","adapter_trim.F2-J105-pH8.bam","CM084267_1_13231056.1, CM084264_1_70355122.0, CM084271_1_43934411.0, CM084272_1_33454573.1, CM084264_1_69275359.1, CM084265_1_66143662.1, CM084278_1_31960704.0, CM084273_1_21179270.1, CM084271_1_44077341.1, CM084264_1_70471433.0, CM084274_1_4773546.0, CM084270_1_42355495.1, CM084278_1_22664889.0, CM084270_1_47077463.0, CM084270_1_4920904.1, CM084274_1_4785935.1, CM084276_1_11709759.0, CM084265_1_70577871.0, CM084268_1_1508040.1, CM084278_1_8558506.1, CM084276_1_20157216.0, CM084267_1_51248426.1, CM084278_1_28652016.0, CM084277_1_18546604.0, CM084268_1_3704020.0, CM084277_1_28144351.0, CM084266_1_68919241.1, CM084274_1_4694551.0, CM084266_1_64164372.0, CM084273_1_42253133.0",30,"adapter_trim.F1-B20-pH8.bam",-0.44,"adapter_trim.F1-B10-pH8.bam",-0.2,0.64 +"101","adapter_trim.F2-J145-pH8.bam","CM084267_1_13231056.1, CM084264_1_70355122.0, CM084271_1_43934411.0, CM084272_1_33454573.1, CM084264_1_69275359.1, CM084265_1_66143662.1, CM084278_1_31960704.0, CM084273_1_21179270.1, CM084271_1_44077341.1, CM084264_1_70471433.0, CM084274_1_4773546.0, CM084270_1_42355495.1, CM084278_1_22664889.0, CM084270_1_47077463.0, CM084270_1_4920904.1, CM084274_1_4785935.1, CM084276_1_11709759.0, CM084265_1_70577871.0, CM084268_1_1508040.1, CM084278_1_8558506.1, CM084276_1_20157216.0, CM084267_1_51248426.1, CM084278_1_28652016.0, CM084277_1_18546604.0, CM084268_1_3704020.0, CM084277_1_28144351.0, CM084266_1_68919241.1, CM084274_1_4694551.0, CM084266_1_64164372.0, CM084273_1_42253133.0",30,"adapter_trim.F1-B21-pH8.bam",-0.17,"adapter_trim.F1-B1-pH8.bam",-0.34,0.51 +"102","adapter_trim.F2-J147-pH8.bam","CM084267_1_13231056.1, CM084264_1_70355122.0, CM084271_1_43934411.0, CM084272_1_33454573.1, CM084264_1_69275359.1, CM084265_1_66143662.1, CM084278_1_31960704.0, CM084273_1_21179270.1, CM084271_1_44077341.1, CM084264_1_70471433.0, CM084274_1_4773546.0, CM084270_1_42355495.1, CM084278_1_22664889.0, CM084270_1_47077463.0, CM084270_1_4920904.1, CM084274_1_4785935.1, CM084276_1_11709759.0, CM084265_1_70577871.0, CM084268_1_1508040.1, CM084278_1_8558506.1, CM084276_1_20157216.0, CM084267_1_51248426.1, CM084278_1_28652016.0, CM084277_1_18546604.0, CM084268_1_3704020.0, CM084277_1_28144351.0, CM084266_1_68919241.1, CM084274_1_4694551.0, CM084266_1_64164372.0, CM084273_1_42253133.0",30,"adapter_trim.F1-B15-pH8.bam",-0.46,"adapter_trim.F1-B3-pH8.bam",-0.17,0.63 +"103","adapter_trim.F2-J142-pH8.bam","CM084272_1_36474242.1, CM084268_1_28845789.0, CM084269_1_39737144.1, CM084270_1_39395913.1, CM084264_1_72054047.0, CM084277_1_18541349.0, CM084266_1_50301553.0, CM084269_1_1577700.0, CM084265_1_46089269.0, CM084279_1_32917232.0, CM084278_1_279490.1, CM084265_1_58036330.1, CM084266_1_63167162.1, CM084266_1_69052082.1, CM084270_1_12307506.1, CM084276_1_6150174.0, CM084276_1_38558590.1, CM084265_1_19672164.0, CM084279_1_1073400.0, CM084276_1_4855640.1, CM084279_1_10147354.1, CM084265_1_69915221.0, CM084269_1_1556138.1, CM084266_1_63195133.1, CM084268_1_3691704.0, CM084267_1_2646659.1, CM084265_1_64735421.0, CM084275_1_25393709.0, CM084276_1_1849333.1, CM084275_1_40706319.1",30,"adapter_trim.F1-B15-pH8.bam",-0.14,"adapter_trim.F1-B7-pH8.bam",-0.29,0.43 +"104","adapter_trim.F2-B13-pH8.bam","CM084272_1_36474242.1, CM084268_1_28845789.0, CM084269_1_39737144.1, CM084270_1_39395913.1, CM084264_1_72054047.0, CM084277_1_18541349.0, CM084266_1_50301553.0, CM084269_1_1577700.0, CM084265_1_46089269.0, CM084279_1_32917232.0, CM084278_1_279490.1, CM084265_1_58036330.1, CM084266_1_63167162.1, CM084266_1_69052082.1, CM084270_1_12307506.1, CM084276_1_6150174.0, CM084276_1_38558590.1, CM084265_1_19672164.0, CM084279_1_1073400.0, CM084276_1_4855640.1, CM084279_1_10147354.1, CM084265_1_69915221.0, CM084269_1_1556138.1, CM084266_1_63195133.1, CM084268_1_3691704.0, CM084267_1_2646659.1, CM084265_1_64735421.0, CM084275_1_25393709.0, CM084276_1_1849333.1, CM084275_1_40706319.1",30,"adapter_trim.F1-B21-pH8.bam",-0.14,"adapter_trim.F1-B8-pH8.bam",-0.01,0.15 +"105","adapter_trim.F2-J105-pH8.bam","CM084268_1_22932625.1, CM084274_1_4694254.1, CM084269_1_15799403.1, CM084275_1_120808.1, CM084266_1_66483893.0, CM084277_1_30027539.0, CM084267_1_51248426.1, CM084269_1_45438488.1, CM084264_1_61167189.1, CM084276_1_38552579.1, CM084265_1_71265328.0, CM084268_1_28845513.0, CM084267_1_832141.0, CM084271_1_37244938.0, CM084269_1_40338566.0, CM084269_1_43525146.0, CM084270_1_12307511.1, CM084271_1_30532401.1, CM084274_1_4694239.1, CM084272_1_1307854.0, CM084273_1_31864421.0, CM084267_1_8118540.1, CM084269_1_35642171.1, CM084271_1_379011.1, CM084267_1_6421243.0, CM084278_1_16774412.0, CM084266_1_69625503.0, CM084273_1_42252907.0, CM084270_1_46588162.1, CM084266_1_68515581.1",30,"adapter_trim.F1-B20-pH8.bam",0.09,"adapter_trim.F1-B7-pH8.bam",0.06,0.15 +"106","adapter_trim.F2-J141-pH8.bam","CM084268_1_22932625.1, CM084274_1_4694254.1, CM084269_1_15799403.1, CM084275_1_120808.1, CM084266_1_66483893.0, CM084277_1_30027539.0, CM084267_1_51248426.1, CM084269_1_45438488.1, CM084264_1_61167189.1, CM084276_1_38552579.1, CM084265_1_71265328.0, CM084268_1_28845513.0, CM084267_1_832141.0, CM084271_1_37244938.0, CM084269_1_40338566.0, CM084269_1_43525146.0, CM084270_1_12307511.1, CM084271_1_30532401.1, CM084274_1_4694239.1, CM084272_1_1307854.0, CM084273_1_31864421.0, CM084267_1_8118540.1, CM084269_1_35642171.1, CM084271_1_379011.1, CM084267_1_6421243.0, CM084278_1_16774412.0, CM084266_1_69625503.0, CM084273_1_42252907.0, CM084270_1_46588162.1, CM084266_1_68515581.1",30,"adapter_trim.F1-B25-pH8.bam",-0.44,"adapter_trim.F1-B10-pH8.bam",-0.47,0.91 +"107","adapter_trim.F2-B1-pH8.bam","CM084268_1_22932625.1, CM084274_1_4694254.1, CM084269_1_15799403.1, CM084275_1_120808.1, CM084266_1_66483893.0, CM084277_1_30027539.0, CM084267_1_51248426.1, CM084269_1_45438488.1, CM084264_1_61167189.1, CM084276_1_38552579.1, CM084265_1_71265328.0, CM084268_1_28845513.0, CM084267_1_832141.0, CM084271_1_37244938.0, CM084269_1_40338566.0, CM084269_1_43525146.0, CM084270_1_12307511.1, CM084271_1_30532401.1, CM084274_1_4694239.1, CM084272_1_1307854.0, CM084273_1_31864421.0, CM084267_1_8118540.1, CM084269_1_35642171.1, CM084271_1_379011.1, CM084267_1_6421243.0, CM084278_1_16774412.0, CM084266_1_69625503.0, CM084273_1_42252907.0, CM084270_1_46588162.1, CM084266_1_68515581.1",30,"adapter_trim.F1-B25-pH8.bam",-0.56,"adapter_trim.F1-B5-pH8.bam",-0.17,0.73 +"108","adapter_trim.F2-B3-pH8.bam","CM084268_1_22932625.1, CM084274_1_4694254.1, CM084269_1_15799403.1, CM084275_1_120808.1, CM084266_1_66483893.0, CM084277_1_30027539.0, CM084267_1_51248426.1, CM084269_1_45438488.1, CM084264_1_61167189.1, CM084276_1_38552579.1, CM084265_1_71265328.0, CM084268_1_28845513.0, CM084267_1_832141.0, CM084271_1_37244938.0, CM084269_1_40338566.0, CM084269_1_43525146.0, CM084270_1_12307511.1, CM084271_1_30532401.1, CM084274_1_4694239.1, CM084272_1_1307854.0, CM084273_1_31864421.0, CM084267_1_8118540.1, CM084269_1_35642171.1, CM084271_1_379011.1, CM084267_1_6421243.0, CM084278_1_16774412.0, CM084266_1_69625503.0, CM084273_1_42252907.0, CM084270_1_46588162.1, CM084266_1_68515581.1",30,"adapter_trim.F1-B15-pH8.bam",-0.03,"adapter_trim.F1-B7-pH8.bam",-0.26,0.29 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CM084265_1_46089269.0, CM084278_1_20689098.0, CM084266_1_68320526.1, CM084269_1_4635012.1, CM084276_1_38788200.0, CM084275_1_38995254.1, CM084274_1_4686930.0, CM084276_1_38117392.1, CM084268_1_3699577.1, CM084273_1_31862042.1, CM084275_1_39780930.1, CM084266_1_69141202.1, CM084279_1_32673936.0, CM084279_1_33014997.0, CM084271_1_26325716.0",30,"adapter_trim.F1-B25-pH8.bam",-0.46,"adapter_trim.F1-B5-pH8.bam",-0.33,0.79 +"112","adapter_trim.F2-J89-pH8.bam","CM084266_1_57884809.0, CM084274_1_4723647.1, CM084277_1_29780894.1, CM084276_1_25807604.0, CM084267_1_2163704.0, CM084275_1_667184.1, CM084265_1_66146092.0, CM084279_1_10151201.0, CM084264_1_70456947.1, CM084275_1_35722074.0, CM084268_1_50679518.1, CM084278_1_16767353.0, CM084278_1_15228710.1, CM084265_1_69007607.0, CM084264_1_70355057.1, CM084265_1_46089269.0, CM084278_1_20689098.0, CM084266_1_68320526.1, CM084269_1_4635012.1, CM084276_1_38788200.0, CM084275_1_38995254.1, CM084274_1_4686930.0, CM084276_1_38117392.1, CM084268_1_3699577.1, CM084273_1_31862042.1, CM084275_1_39780930.1, CM084266_1_69141202.1, CM084279_1_32673936.0, CM084279_1_33014997.0, CM084271_1_26325716.0",30,"adapter_trim.F1-B15-pH8.bam",-0.11,"adapter_trim.F1-B10-pH8.bam",-0.31,0.42 +"113","adapter_trim.F2-B1-pH8.bam","CM084266_1_57884809.0, CM084274_1_4723647.1, CM084277_1_29780894.1, CM084276_1_25807604.0, CM084267_1_2163704.0, CM084275_1_667184.1, CM084265_1_66146092.0, CM084279_1_10151201.0, CM084264_1_70456947.1, CM084275_1_35722074.0, CM084268_1_50679518.1, CM084278_1_16767353.0, CM084278_1_15228710.1, CM084265_1_69007607.0, CM084264_1_70355057.1, CM084265_1_46089269.0, CM084278_1_20689098.0, CM084266_1_68320526.1, CM084269_1_4635012.1, CM084276_1_38788200.0, CM084275_1_38995254.1, CM084274_1_4686930.0, CM084276_1_38117392.1, CM084268_1_3699577.1, CM084273_1_31862042.1, CM084275_1_39780930.1, CM084266_1_69141202.1, CM084279_1_32673936.0, CM084279_1_33014997.0, 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CM084264_1_26771521.1, CM084274_1_4726242.0, CM084266_1_70707506.0, CM084267_1_52896140.0, CM084267_1_9176202.1, CM084274_1_4708834.1, CM084271_1_3821125.0, CM084266_1_70531188.1, CM084264_1_34300494.1, CM084275_1_661848.1, CM084271_1_760000.1, CM084266_1_1230887.1, CM084269_1_43524691.1, CM084265_1_46089269.1, CM084264_1_73926179.1, CM084264_1_70174612.1, CM084266_1_57882573.1, CM084274_1_4793445.0, CM084266_1_50301524.1, CM084274_1_4863903.1, CM084271_1_3807705.1, CM084274_1_4694916.1, CM084264_1_70355125.0, CM084265_1_69924624.1, CM084274_1_6125439.1, CM084277_1_30611563.1, CM084274_1_4795086.0",30,"adapter_trim.F1-B21-pH8.bam",0.1,"adapter_trim.F1-B4-pH8.bam",-0.31,0.41 +"116","adapter_trim.F2-J123-pH8.bam","CM084276_1_771556.1, CM084265_1_70594980.1, CM084273_1_7839417.0, CM084269_1_15799430.0, CM084268_1_24031315.1, CM084276_1_2841292.1, CM084266_1_58087794.0, CM084266_1_64725871.0, CM084275_1_312961.1, CM084277_1_4875961.0, CM084270_1_47076332.0, CM084266_1_69625503.1, 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CM084265_1_68074592.1",30,"adapter_trim.F1-B8-pH8.bam",-0.16,"adapter_trim.F1-B1-pH8.bam",-0.21,0.37 +"119","adapter_trim.F2-J125-pH8.bam","CM084274_1_4700811.1, CM084270_1_21846007.1, CM084266_1_64725837.1, CM084271_1_44083010.0, CM084276_1_38285682.1, CM084274_1_4795903.0, CM084274_1_4795058.1, CM084279_1_10156977.0, CM084274_1_4795062.0, CM084265_1_72992174.1, CM084279_1_161458.0, CM084265_1_64733351.1, CM084279_1_1073112.0, CM084264_1_69903182.1, CM084278_1_20625152.1, CM084271_1_37240198.1, CM084275_1_35720350.1, CM084278_1_8558566.1, CM084277_1_30642880.0, CM084268_1_938570.0, CM084266_1_69052083.0, CM084267_1_5165711.1, CM084278_1_20865574.0, CM084265_1_65204740.0, CM084265_1_66141830.0, CM084272_1_1584317.1, CM084274_1_4709650.0, CM084265_1_71825876.0, CM084276_1_20157216.1, CM084265_1_68074592.1",30,"adapter_trim.F1-B25-pH8.bam",-0.32,"adapter_trim.F1-B4-pH8.bam",0.05,0.37 +"120","adapter_trim.F2-J88-pH8.bam","CM084274_1_4700811.1, CM084270_1_21846007.1, CM084266_1_64725837.1, CM084271_1_44083010.0, CM084276_1_38285682.1, CM084274_1_4795903.0, CM084274_1_4795058.1, CM084279_1_10156977.0, CM084274_1_4795062.0, CM084265_1_72992174.1, CM084279_1_161458.0, CM084265_1_64733351.1, CM084279_1_1073112.0, CM084264_1_69903182.1, CM084278_1_20625152.1, CM084271_1_37240198.1, CM084275_1_35720350.1, CM084278_1_8558566.1, CM084277_1_30642880.0, CM084268_1_938570.0, CM084266_1_69052083.0, CM084267_1_5165711.1, CM084278_1_20865574.0, CM084265_1_65204740.0, CM084265_1_66141830.0, CM084272_1_1584317.1, CM084274_1_4709650.0, CM084265_1_71825876.0, CM084276_1_20157216.1, CM084265_1_68074592.1",30,"adapter_trim.F1-B20-pH8.bam",-0.27,"adapter_trim.F1-B7-pH8.bam",-0.71,0.98 +"121","adapter_trim.F2-B11-pH8.bam","CM084274_1_4700811.1, CM084270_1_21846007.1, CM084266_1_64725837.1, CM084271_1_44083010.0, CM084276_1_38285682.1, CM084274_1_4795903.0, CM084274_1_4795058.1, CM084279_1_10156977.0, CM084274_1_4795062.0, CM084265_1_72992174.1, CM084279_1_161458.0, CM084265_1_64733351.1, 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CM084267_1_5165711.1, CM084278_1_20865574.0, CM084265_1_65204740.0, CM084265_1_66141830.0, CM084272_1_1584317.1, CM084274_1_4709650.0, CM084265_1_71825876.0, CM084276_1_20157216.1, CM084265_1_68074592.1",30,"adapter_trim.F1-B21-pH8.bam",-0.59,"adapter_trim.F1-B8-pH8.bam",-0.26,0.85 +"123","adapter_trim.F2-J122-pH8.bam","CM084269_1_1577748.1, CM084269_1_40447963.1, CM084272_1_43469575.1, CM084275_1_39502374.0, CM084276_1_38961028.0, CM084278_1_23541019.0, CM084265_1_64735183.0, CM084265_1_976180.0, CM084268_1_50224896.0, CM084278_1_20865574.0, CM084265_1_1816612.1, CM084266_1_62460055.0, CM084272_1_43469486.0, CM084268_1_50693763.0, CM084275_1_327935.1, CM084268_1_45628.1, CM084271_1_44134607.0, CM084269_1_43525133.0, CM084271_1_290137.1, CM084277_1_30505565.0, CM084266_1_69141121.0, CM084267_1_2653040.1, CM084265_1_70977429.1, CM084266_1_57882838.0, CM084270_1_46588167.0, CM084269_1_1563962.0, CM084278_1_22667296.0, CM084271_1_3805848.1, CM084264_1_68689030.0, CM084267_1_51248424.1",30,"adapter_trim.F1-B25-pH8.bam",-0.09,"adapter_trim.F1-B10-pH8.bam",-0.13,0.22 +"124","adapter_trim.F2-J127-pH8.bam","CM084269_1_1577748.1, CM084269_1_40447963.1, CM084272_1_43469575.1, CM084275_1_39502374.0, CM084276_1_38961028.0, CM084278_1_23541019.0, CM084265_1_64735183.0, CM084265_1_976180.0, CM084268_1_50224896.0, CM084278_1_20865574.0, CM084265_1_1816612.1, CM084266_1_62460055.0, CM084272_1_43469486.0, CM084268_1_50693763.0, CM084275_1_327935.1, CM084268_1_45628.1, CM084271_1_44134607.0, CM084269_1_43525133.0, CM084271_1_290137.1, CM084277_1_30505565.0, CM084266_1_69141121.0, CM084267_1_2653040.1, CM084265_1_70977429.1, CM084266_1_57882838.0, CM084270_1_46588167.0, CM084269_1_1563962.0, CM084278_1_22667296.0, CM084271_1_3805848.1, CM084264_1_68689030.0, CM084267_1_51248424.1",30,"adapter_trim.F1-B25-pH8.bam",-0.13,"adapter_trim.F1-B10-pH8.bam",-0.09,0.22 +"125","adapter_trim.F2-B12-pH8.bam","CM084269_1_1577748.1, CM084269_1_40447963.1, CM084272_1_43469575.1, CM084275_1_39502374.0, CM084276_1_38961028.0, CM084278_1_23541019.0, CM084265_1_64735183.0, CM084265_1_976180.0, CM084268_1_50224896.0, CM084278_1_20865574.0, CM084265_1_1816612.1, CM084266_1_62460055.0, CM084272_1_43469486.0, CM084268_1_50693763.0, CM084275_1_327935.1, CM084268_1_45628.1, CM084271_1_44134607.0, CM084269_1_43525133.0, CM084271_1_290137.1, CM084277_1_30505565.0, CM084266_1_69141121.0, CM084267_1_2653040.1, CM084265_1_70977429.1, CM084266_1_57882838.0, CM084270_1_46588167.0, CM084269_1_1563962.0, CM084278_1_22667296.0, CM084271_1_3805848.1, CM084264_1_68689030.0, CM084267_1_51248424.1",30,"adapter_trim.F1-B15-pH8.bam",-0.24,"adapter_trim.F1-B4-pH8.bam",-0.1,0.34 +"126","adapter_trim.F2-J105-pH8.bam","CM084268_1_50321855.0, CM084264_1_73309406.0, CM084270_1_4751873.0, CM084265_1_71794141.1, CM084269_1_15798323.1, CM084267_1_2653040.0, CM084265_1_64585921.0, CM084266_1_1233079.1, CM084266_1_67235326.1, CM084264_1_34294469.0, CM084274_1_4793087.1, CM084277_1_29208305.0, CM084266_1_69806306.0, CM084266_1_68320536.1, CM084276_1_38960928.0, CM084272_1_33503448.0, CM084276_1_38558585.1, CM084274_1_4730026.0, CM084276_1_38772805.0, CM084272_1_1894337.0, CM084271_1_342830.0, CM084278_1_20623588.1, CM084264_1_66439628.1, CM084271_1_43849282.1, CM084275_1_8878521.0, CM084268_1_276461.0, CM084274_1_4695098.0, CM084269_1_1555101.1, CM084269_1_42862718.0, CM084266_1_71149023.1",30,"adapter_trim.F1-B8-pH8.bam",-0.45,"adapter_trim.F1-B3-pH8.bam",-0.27,0.72 +"127","adapter_trim.F2-J108-pH8.bam","CM084268_1_50321855.0, CM084264_1_73309406.0, CM084270_1_4751873.0, CM084265_1_71794141.1, CM084269_1_15798323.1, CM084267_1_2653040.0, CM084265_1_64585921.0, CM084266_1_1233079.1, CM084266_1_67235326.1, CM084264_1_34294469.0, CM084274_1_4793087.1, CM084277_1_29208305.0, CM084266_1_69806306.0, CM084266_1_68320536.1, CM084276_1_38960928.0, CM084272_1_33503448.0, CM084276_1_38558585.1, CM084274_1_4730026.0, CM084276_1_38772805.0, CM084272_1_1894337.0, CM084271_1_342830.0, CM084278_1_20623588.1, CM084264_1_66439628.1, CM084271_1_43849282.1, CM084275_1_8878521.0, CM084268_1_276461.0, CM084274_1_4695098.0, CM084269_1_1555101.1, CM084269_1_42862718.0, CM084266_1_71149023.1",30,"adapter_trim.F1-B15-pH8.bam",-0.2,"adapter_trim.F1-B1-pH8.bam",-0.22,0.42 +"128","adapter_trim.F2-J143-pH8.bam","CM084268_1_50321855.0, CM084264_1_73309406.0, CM084270_1_4751873.0, CM084265_1_71794141.1, CM084269_1_15798323.1, CM084267_1_2653040.0, CM084265_1_64585921.0, CM084266_1_1233079.1, CM084266_1_67235326.1, CM084264_1_34294469.0, CM084274_1_4793087.1, CM084277_1_29208305.0, CM084266_1_69806306.0, CM084266_1_68320536.1, CM084276_1_38960928.0, CM084272_1_33503448.0, CM084276_1_38558585.1, CM084274_1_4730026.0, CM084276_1_38772805.0, CM084272_1_1894337.0, CM084271_1_342830.0, CM084278_1_20623588.1, CM084264_1_66439628.1, CM084271_1_43849282.1, CM084275_1_8878521.0, CM084268_1_276461.0, CM084274_1_4695098.0, CM084269_1_1555101.1, CM084269_1_42862718.0, CM084266_1_71149023.1",30,"adapter_trim.F1-B25-pH8.bam",-0.3,"adapter_trim.F1-B11-pH8.bam",0.29,0.59 +"129","adapter_trim.F2-B5-pH8.bam","CM084268_1_50321855.0, CM084264_1_73309406.0, CM084270_1_4751873.0, CM084265_1_71794141.1, CM084269_1_15798323.1, CM084267_1_2653040.0, CM084265_1_64585921.0, CM084266_1_1233079.1, CM084266_1_67235326.1, CM084264_1_34294469.0, CM084274_1_4793087.1, CM084277_1_29208305.0, CM084266_1_69806306.0, CM084266_1_68320536.1, CM084276_1_38960928.0, CM084272_1_33503448.0, CM084276_1_38558585.1, CM084274_1_4730026.0, CM084276_1_38772805.0, CM084272_1_1894337.0, CM084271_1_342830.0, CM084278_1_20623588.1, CM084264_1_66439628.1, CM084271_1_43849282.1, CM084275_1_8878521.0, CM084268_1_276461.0, CM084274_1_4695098.0, CM084269_1_1555101.1, CM084269_1_42862718.0, CM084266_1_71149023.1",30,"adapter_trim.F1-B20-pH8.bam",-0.12,"adapter_trim.F1-B9-pH8.bam",-0.75,0.87 +"130","adapter_trim.F2-J105-pH8.bam","CM084264_1_70174663.1, CM084276_1_1856653.0, CM084273_1_31862787.1, CM084275_1_39338236.0, CM084278_1_23541019.0, CM084278_1_20630020.0, CM084275_1_25393416.1, CM084265_1_68806446.1, CM084275_1_23083657.1, CM084272_1_33589893.1, CM084274_1_4869825.0, CM084264_1_72054055.1, CM084278_1_24948349.0, CM084264_1_34301630.1, CM084269_1_43525133.1, CM084265_1_61648602.1, CM084272_1_33571757.0, CM084267_1_6421632.1, CM084271_1_37237146.1, CM084269_1_43525348.1, CM084268_1_22932625.0, CM084268_1_50225492.1, CM084267_1_5952857.1, CM084274_1_4795058.1, CM084264_1_34294487.0, CM084265_1_71796271.0, CM084272_1_1308695.0, CM084276_1_1625292.1, CM084271_1_43868149.1, CM084268_1_298790.0",30,"adapter_trim.F1-B21-pH8.bam",-0.03,"adapter_trim.F1-B8-pH8.bam",-0.55,0.58 +"131","adapter_trim.F2-B8-pH8.bam","CM084264_1_70174663.1, CM084276_1_1856653.0, CM084273_1_31862787.1, CM084275_1_39338236.0, CM084278_1_23541019.0, CM084278_1_20630020.0, CM084275_1_25393416.1, CM084265_1_68806446.1, CM084275_1_23083657.1, CM084272_1_33589893.1, CM084274_1_4869825.0, CM084264_1_72054055.1, CM084278_1_24948349.0, CM084264_1_34301630.1, CM084269_1_43525133.1, CM084265_1_61648602.1, CM084272_1_33571757.0, CM084267_1_6421632.1, CM084271_1_37237146.1, CM084269_1_43525348.1, CM084268_1_22932625.0, CM084268_1_50225492.1, CM084267_1_5952857.1, CM084274_1_4795058.1, CM084264_1_34294487.0, CM084265_1_71796271.0, CM084272_1_1308695.0, CM084276_1_1625292.1, CM084271_1_43868149.1, CM084268_1_298790.0",30,"adapter_trim.F1-B15-pH8.bam",-0.47,"adapter_trim.F1-B5-pH8.bam",-0.48,0.95 +"132","adapter_trim.F2-J122-pH8.bam","CM084274_1_4694578.0, CM084275_1_327388.1, CM084268_1_50679469.1, CM084274_1_4708033.0, CM084279_1_32641182.1, CM084264_1_70355122.1, CM084268_1_82411.1, CM084275_1_1304701.1, CM084269_1_1538788.0, CM084265_1_69381551.0, CM084268_1_3704024.1, CM084276_1_38558546.0, CM084269_1_1549398.0, CM084269_1_47563826.0, CM084268_1_4036222.0, CM084273_1_31864733.0, CM084274_1_34977132.1, CM084270_1_46590815.0, CM084275_1_400249.0, CM084276_1_38773493.1, CM084270_1_35204451.1, CM084268_1_50219223.1, CM084278_1_19961223.0, CM084272_1_33617974.0, CM084271_1_276716.1, CM084268_1_28845816.0, CM084272_1_18170755.0, CM084279_1_32915259.0, CM084265_1_59221275.1, CM084264_1_61167189.0",30,"adapter_trim.F1-B8-pH8.bam",-0.32,"adapter_trim.F1-B7-pH8.bam",-0.3,0.62 +"133","adapter_trim.F2-J123-pH8.bam","CM084274_1_4694578.0, CM084275_1_327388.1, CM084268_1_50679469.1, CM084274_1_4708033.0, CM084279_1_32641182.1, CM084264_1_70355122.1, CM084268_1_82411.1, CM084275_1_1304701.1, CM084269_1_1538788.0, CM084265_1_69381551.0, CM084268_1_3704024.1, CM084276_1_38558546.0, CM084269_1_1549398.0, CM084269_1_47563826.0, CM084268_1_4036222.0, CM084273_1_31864733.0, CM084274_1_34977132.1, CM084270_1_46590815.0, CM084275_1_400249.0, CM084276_1_38773493.1, CM084270_1_35204451.1, CM084268_1_50219223.1, CM084278_1_19961223.0, CM084272_1_33617974.0, CM084271_1_276716.1, CM084268_1_28845816.0, CM084272_1_18170755.0, CM084279_1_32915259.0, CM084265_1_59221275.1, CM084264_1_61167189.0",30,"adapter_trim.F1-B8-pH8.bam",-0.06,"adapter_trim.F1-B10-pH8.bam",-0.36,0.42 +"134","adapter_trim.F2-J127-pH8.bam","CM084274_1_4694578.0, CM084275_1_327388.1, CM084268_1_50679469.1, CM084274_1_4708033.0, CM084279_1_32641182.1, CM084264_1_70355122.1, CM084268_1_82411.1, CM084275_1_1304701.1, CM084269_1_1538788.0, CM084265_1_69381551.0, CM084268_1_3704024.1, CM084276_1_38558546.0, CM084269_1_1549398.0, CM084269_1_47563826.0, CM084268_1_4036222.0, CM084273_1_31864733.0, CM084274_1_34977132.1, CM084270_1_46590815.0, CM084275_1_400249.0, CM084276_1_38773493.1, CM084270_1_35204451.1, CM084268_1_50219223.1, CM084278_1_19961223.0, CM084272_1_33617974.0, CM084271_1_276716.1, CM084268_1_28845816.0, CM084272_1_18170755.0, CM084279_1_32915259.0, CM084265_1_59221275.1, CM084264_1_61167189.0",30,"adapter_trim.F1-B25-pH8.bam",0.02,"adapter_trim.F1-B4-pH8.bam",0.21,0.23 +"135","adapter_trim.F2-J142-pH8.bam","CM084274_1_4694578.0, CM084275_1_327388.1, CM084268_1_50679469.1, CM084274_1_4708033.0, CM084279_1_32641182.1, CM084264_1_70355122.1, CM084268_1_82411.1, CM084275_1_1304701.1, CM084269_1_1538788.0, CM084265_1_69381551.0, CM084268_1_3704024.1, CM084276_1_38558546.0, CM084269_1_1549398.0, CM084269_1_47563826.0, CM084268_1_4036222.0, CM084273_1_31864733.0, CM084274_1_34977132.1, CM084270_1_46590815.0, CM084275_1_400249.0, CM084276_1_38773493.1, CM084270_1_35204451.1, CM084268_1_50219223.1, CM084278_1_19961223.0, CM084272_1_33617974.0, CM084271_1_276716.1, CM084268_1_28845816.0, CM084272_1_18170755.0, CM084279_1_32915259.0, CM084265_1_59221275.1, CM084264_1_61167189.0",30,"adapter_trim.F1-B8-pH8.bam",-0.12,"adapter_trim.F1-B7-pH8.bam",-0.37,0.49 +"136","adapter_trim.F2-J83-pH8.bam","CM084274_1_4694578.0, CM084275_1_327388.1, CM084268_1_50679469.1, CM084274_1_4708033.0, CM084279_1_32641182.1, CM084264_1_70355122.1, CM084268_1_82411.1, CM084275_1_1304701.1, CM084269_1_1538788.0, CM084265_1_69381551.0, CM084268_1_3704024.1, CM084276_1_38558546.0, CM084269_1_1549398.0, CM084269_1_47563826.0, CM084268_1_4036222.0, CM084273_1_31864733.0, CM084274_1_34977132.1, CM084270_1_46590815.0, CM084275_1_400249.0, CM084276_1_38773493.1, CM084270_1_35204451.1, CM084268_1_50219223.1, CM084278_1_19961223.0, CM084272_1_33617974.0, CM084271_1_276716.1, CM084268_1_28845816.0, CM084272_1_18170755.0, CM084279_1_32915259.0, CM084265_1_59221275.1, CM084264_1_61167189.0",30,"adapter_trim.F1-B15-pH8.bam",-0.37,"adapter_trim.F1-B10-pH8.bam",-0.39,0.76 +"137","adapter_trim.F2-J108-pH8.bam","CM084273_1_31862787.1, CM084274_1_4863917.1, CM084265_1_68073022.1, CM084270_1_4920968.1, CM084274_1_4694855.0, CM084277_1_30505537.1, CM084265_1_70607188.1, CM084267_1_2646659.1, CM084268_1_298790.1, CM084274_1_4864753.1, CM084268_1_2832742.1, CM084272_1_18193991.1, CM084271_1_3816215.1, CM084270_1_4751834.1, CM084267_1_52593751.1, CM084274_1_7449618.0, CM084264_1_15064138.0, CM084276_1_4855640.1, CM084276_1_1856630.0, CM084278_1_23536520.0, CM084272_1_33454573.0, CM084265_1_70974986.0, CM084266_1_69314162.0, CM084265_1_72071366.1, CM084278_1_20734392.0, CM084276_1_38552579.1, CM084270_1_8444546.1, CM084265_1_59221213.0, CM084278_1_22667323.1, CM084275_1_25395464.0",30,"adapter_trim.F1-B21-pH8.bam",-0.26,"adapter_trim.F1-B10-pH8.bam",-0.14,0.4 +"138","adapter_trim.F2-J105-pH8.bam","CM084269_1_12905590.1, CM084269_1_15809957.0, CM084271_1_257176.0, CM084272_1_1311984.0, CM084277_1_29781980.1, CM084269_1_40447963.0, CM084271_1_37237148.1, CM084276_1_25809477.0, CM084273_1_214008.1, CM084268_1_276461.1, CM084274_1_4694578.0, CM084267_1_50994309.0, CM084273_1_31865817.0, CM084276_1_2855915.1, CM084273_1_7839325.0, CM084267_1_52593733.0, CM084272_1_1308683.0, CM084278_1_20858397.0, CM084266_1_61737001.0, CM084269_1_1549405.1, CM084269_1_15823106.0, CM084272_1_18188792.1, CM084274_1_34976974.0, CM084269_1_35627054.0, CM084266_1_71319410.1, CM084266_1_23294618.1, CM084276_1_38787723.0, CM084277_1_30623529.1, CM084270_1_47103324.0, 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CM084271_1_257176.0, CM084272_1_1311984.0, CM084277_1_29781980.1, CM084269_1_40447963.0, CM084271_1_37237148.1, CM084276_1_25809477.0, CM084273_1_214008.1, CM084268_1_276461.1, CM084274_1_4694578.0, CM084267_1_50994309.0, CM084273_1_31865817.0, CM084276_1_2855915.1, CM084273_1_7839325.0, CM084267_1_52593733.0, CM084272_1_1308683.0, CM084278_1_20858397.0, CM084266_1_61737001.0, CM084269_1_1549405.1, CM084269_1_15823106.0, CM084272_1_18188792.1, CM084274_1_34976974.0, CM084269_1_35627054.0, CM084266_1_71319410.1, CM084266_1_23294618.1, CM084276_1_38787723.0, CM084277_1_30623529.1, CM084270_1_47103324.0, CM084266_1_67098131.1",30,"adapter_trim.F1-B25-pH8.bam",-0.22,"adapter_trim.F1-B9-pH8.bam",-0.37,0.59 +"141","adapter_trim.F2-J105-pH8.bam","CM084274_1_4795468.0, CM084276_1_38072633.1, CM084272_1_11675265.1, CM084275_1_327935.1, CM084265_1_69381551.1, CM084268_1_50323439.0, CM084277_1_10628425.0, CM084275_1_25400810.0, CM084268_1_50679518.1, CM084271_1_256574.1, CM084267_1_51167096.0, CM084274_1_34977142.1, CM084276_1_38558507.0, CM084271_1_10303572.0, CM084279_1_33014997.0, CM084271_1_290137.1, CM084275_1_36064337.1, CM084278_1_23540735.1, CM084269_1_1572344.0, CM084278_1_31960662.1, CM084265_1_60316158.0, CM084264_1_2740173.0, CM084276_1_37355346.1, CM084274_1_4694230.0, CM084276_1_38773525.1, CM084272_1_18574376.1, CM084265_1_59221301.0, CM084266_1_23321829.1, CM084275_1_39780930.0, CM084276_1_714435.0",30,"adapter_trim.F1-B15-pH8.bam",0.1,"adapter_trim.F1-B9-pH8.bam",-0.14,0.24 +"142","adapter_trim.F2-B1-pH8.bam","CM084274_1_4795468.0, CM084276_1_38072633.1, CM084272_1_11675265.1, CM084275_1_327935.1, CM084265_1_69381551.1, CM084268_1_50323439.0, CM084277_1_10628425.0, CM084275_1_25400810.0, CM084268_1_50679518.1, CM084271_1_256574.1, CM084267_1_51167096.0, CM084274_1_34977142.1, CM084276_1_38558507.0, CM084271_1_10303572.0, CM084279_1_33014997.0, CM084271_1_290137.1, CM084275_1_36064337.1, CM084278_1_23540735.1, CM084269_1_1572344.0, CM084278_1_31960662.1, CM084265_1_60316158.0, CM084264_1_2740173.0, CM084276_1_37355346.1, CM084274_1_4694230.0, CM084276_1_38773525.1, CM084272_1_18574376.1, CM084265_1_59221301.0, CM084266_1_23321829.1, CM084275_1_39780930.0, CM084276_1_714435.0",30,"adapter_trim.F1-B20-pH8.bam",0.04,"adapter_trim.F1-B8-pH8.bam",-0.2,0.24 +"143","adapter_trim.F2-B16-pH8.bam","CM084278_1_22660266.0, CM084268_1_49721842.1, CM084266_1_65580309.0, CM084274_1_4793445.0, CM084265_1_71265269.1, CM084269_1_1577711.0, CM084276_1_38773493.1, CM084267_1_2653035.1, CM084271_1_43860505.1, CM084266_1_46766307.0, CM084264_1_69861978.0, CM084265_1_70597838.0, CM084264_1_69865995.0, CM084265_1_71265340.1, CM084273_1_268158.0, CM084271_1_760000.0, CM084278_1_23554760.1, CM084265_1_59221155.0, CM084278_1_23541019.0, CM084265_1_68798193.1, CM084265_1_3130643.0, CM084278_1_23540722.1, CM084271_1_10301897.1, CM084271_1_43817223.0, CM084266_1_68643398.0, CM084264_1_61167131.0, CM084264_1_70182851.0, CM084276_1_38772805.0, CM084265_1_71826940.1, CM084272_1_43469474.0",30,"adapter_trim.F1-B25-pH8.bam",0.17,"adapter_trim.F1-B10-pH8.bam",-0.39,0.56 +"144","adapter_trim.F2-J147-pH8.bam","CM084270_1_42355504.0, CM084266_1_70707608.1, CM084271_1_3821267.1, CM084270_1_10495977.0, CM084267_1_13261500.0, CM084269_1_12905566.0, CM084269_1_15823188.0, CM084278_1_23536960.0, CM084274_1_43102349.0, CM084272_1_18170755.1, CM084273_1_31866838.0, CM084270_1_32126089.0, CM084279_1_33759502.1, CM084274_1_4729950.0, CM084269_1_15798363.0, CM084270_1_47076365.0, CM084277_1_30168073.1, CM084273_1_31864733.0, CM084266_1_64725837.0, CM084274_1_4789702.1, CM084265_1_68806450.1, CM084273_1_31862649.1, CM084270_1_47076329.0, CM084276_1_38943253.0, CM084265_1_70974986.1, CM084275_1_529192.1, CM084274_1_4792243.0, CM084268_1_22040366.1, CM084272_1_1704343.1, CM084271_1_10303572.0",30,"adapter_trim.F1-B8-pH8.bam",-0.22,"adapter_trim.F1-B11-pH8.bam",-0.45,0.67 +"145","adapter_trim.F2-J86-pH8.bam","CM084270_1_42355504.0, CM084266_1_70707608.1, CM084271_1_3821267.1, CM084270_1_10495977.0, CM084267_1_13261500.0, CM084269_1_12905566.0, CM084269_1_15823188.0, CM084278_1_23536960.0, CM084274_1_43102349.0, CM084272_1_18170755.1, CM084273_1_31866838.0, CM084270_1_32126089.0, CM084279_1_33759502.1, CM084274_1_4729950.0, CM084269_1_15798363.0, CM084270_1_47076365.0, CM084277_1_30168073.1, CM084273_1_31864733.0, CM084266_1_64725837.0, CM084274_1_4789702.1, CM084265_1_68806450.1, CM084273_1_31862649.1, CM084270_1_47076329.0, CM084276_1_38943253.0, CM084265_1_70974986.1, CM084275_1_529192.1, CM084274_1_4792243.0, CM084268_1_22040366.1, CM084272_1_1704343.1, CM084271_1_10303572.0",30,"adapter_trim.F1-B20-pH8.bam",-0.3,"adapter_trim.F1-B10-pH8.bam",-0.12,0.42 +"146","adapter_trim.F2-J142-pH8.bam","CM084277_1_29782029.1, CM084279_1_1512885.0, CM084266_1_57882736.0, CM084271_1_19655878.1, CM084264_1_74191574.0, CM084270_1_19461856.1, CM084279_1_1064861.1, CM084273_1_7839210.0, CM084269_1_40338578.0, CM084268_1_938570.1, CM084265_1_59221291.0, CM084272_1_18189795.0, CM084274_1_4863343.1, CM084277_1_30611564.0, CM084278_1_20734376.1, CM084268_1_49721842.1, CM084269_1_42862716.1, CM084279_1_1072330.1, CM084279_1_10153273.1, CM084273_1_31863691.0, CM084276_1_12392697.1, CM084265_1_73060616.1, CM084267_1_956424.0, CM084277_1_6198938.0, CM084266_1_57882606.1, CM084272_1_33589893.0, CM084265_1_72990731.1, CM084271_1_3822736.0, CM084264_1_69534058.1, CM084265_1_67424061.0",30,"adapter_trim.F1-B8-pH8.bam",-0.36,"adapter_trim.F1-B5-pH8.bam",-0.28,0.64 +"147","adapter_trim.F2-J105-pH8.bam","CM084266_1_58102684.1, CM084264_1_34294472.0, CM084267_1_2908966.0, CM084279_1_31065257.0, CM084267_1_52092644.0, CM084266_1_70706235.0, CM084275_1_39420927.1, CM084277_1_4875899.1, CM084266_1_68515581.0, CM084273_1_31865717.0, CM084278_1_23539431.1, CM084266_1_59364074.1, CM084266_1_66383694.0, CM084268_1_50679518.1, CM084269_1_45420345.1, CM084264_1_61227544.1, CM084274_1_4869977.1, CM084274_1_5046195.1, CM084278_1_8558566.1, CM084266_1_66485296.1, CM084269_1_15812965.0, CM084265_1_66689301.0, CM084275_1_2509950.0, CM084272_1_33578227.1, CM084275_1_25393416.1, CM084276_1_1849333.1, CM084267_1_2426156.1, CM084268_1_28845823.1, CM084269_1_42862695.1, CM084275_1_327911.0",30,"adapter_trim.F1-B8-pH8.bam",-0.09,"adapter_trim.F1-B9-pH8.bam",-0.23,0.32 +"148","adapter_trim.F2-J122-pH8.bam","CM084266_1_58102684.1, CM084264_1_34294472.0, CM084267_1_2908966.0, CM084279_1_31065257.0, CM084267_1_52092644.0, CM084266_1_70706235.0, CM084275_1_39420927.1, CM084277_1_4875899.1, CM084266_1_68515581.0, CM084273_1_31865717.0, CM084278_1_23539431.1, CM084266_1_59364074.1, CM084266_1_66383694.0, CM084268_1_50679518.1, CM084269_1_45420345.1, CM084264_1_61227544.1, CM084274_1_4869977.1, CM084274_1_5046195.1, CM084278_1_8558566.1, CM084266_1_66485296.1, CM084269_1_15812965.0, CM084265_1_66689301.0, CM084275_1_2509950.0, CM084272_1_33578227.1, CM084275_1_25393416.1, CM084276_1_1849333.1, CM084267_1_2426156.1, CM084268_1_28845823.1, CM084269_1_42862695.1, CM084275_1_327911.0",30,"adapter_trim.F1-B25-pH8.bam",0.11,"adapter_trim.F1-B4-pH8.bam",0.03,0.14 +"149","adapter_trim.F2-J142-pH8.bam","CM084277_1_30635514.1, CM084277_1_30505537.0, CM084274_1_4863903.1, CM084274_1_4864445.0, CM084278_1_28652016.1, CM084265_1_60316111.1, CM084269_1_46688879.0, CM084276_1_1625423.1, CM084266_1_63195162.1, CM084278_1_20734507.0, CM084271_1_43851366.0, CM084265_1_68074267.0, CM084268_1_50200545.0, CM084271_1_3814148.0, CM084271_1_44069731.0, CM084268_1_24030404.0, CM084265_1_64527973.0, CM084278_1_22657588.0, CM084264_1_71718010.0, CM084274_1_34977105.1, CM084271_1_44105575.0, CM084278_1_8558566.1, CM084265_1_71794141.0, CM084264_1_72054205.0, CM084275_1_38169337.0, CM084267_1_5165671.0, CM084274_1_4727151.0, CM084265_1_8362532.1, CM084274_1_4863726.0, CM084279_1_1892713.0",30,"adapter_trim.F1-B21-pH8.bam",-0.18,"adapter_trim.F1-B1-pH8.bam",-0.17,0.35 +"150","adapter_trim.F2-J147-pH8.bam","CM084277_1_30635514.1, CM084277_1_30505537.0, CM084274_1_4863903.1, CM084274_1_4864445.0, CM084278_1_28652016.1, CM084265_1_60316111.1, CM084269_1_46688879.0, CM084276_1_1625423.1, CM084266_1_63195162.1, CM084278_1_20734507.0, CM084271_1_43851366.0, CM084265_1_68074267.0, CM084268_1_50200545.0, CM084271_1_3814148.0, CM084271_1_44069731.0, CM084268_1_24030404.0, CM084265_1_64527973.0, CM084278_1_22657588.0, CM084264_1_71718010.0, CM084274_1_34977105.1, CM084271_1_44105575.0, CM084278_1_8558566.1, CM084265_1_71794141.0, CM084264_1_72054205.0, CM084275_1_38169337.0, CM084267_1_5165671.0, CM084274_1_4727151.0, CM084265_1_8362532.1, CM084274_1_4863726.0, CM084279_1_1892713.0",30,"adapter_trim.F1-B15-pH8.bam",-0.64,"adapter_trim.F1-B9-pH8.bam",-0.56,1.2 +"151","adapter_trim.F2-J141-pH8.bam","CM084266_1_68478650.0, CM084278_1_29698392.1, CM084272_1_1894276.0, CM084271_1_337322.1, CM084277_1_30168073.0, CM084274_1_4695205.0, CM084274_1_5028288.1, CM084274_1_42296087.1, CM084267_1_48167440.1, CM084274_1_4808081.0, CM084271_1_3807705.0, CM084275_1_524614.0, CM084265_1_58483282.1, CM084269_1_4628634.0, CM084264_1_68634780.0, CM084265_1_14403559.1, CM084266_1_71166449.1, CM084270_1_8444546.1, CM084273_1_31865957.1, CM084265_1_58483282.0, CM084267_1_6421422.0, CM084269_1_4628639.1, CM084276_1_771542.1, CM084278_1_20734519.0, CM084269_1_1558034.0, CM084272_1_18194995.1, CM084269_1_43529904.0, CM084268_1_49721957.1, CM084276_1_714435.1, CM084272_1_1584317.1",30,"adapter_trim.F1-B15-pH8.bam",-0.44,"adapter_trim.F1-B3-pH8.bam",-0.15,0.59 +"152","adapter_trim.F2-J142-pH8.bam","CM084266_1_68478650.0, CM084278_1_29698392.1, CM084272_1_1894276.0, CM084271_1_337322.1, CM084277_1_30168073.0, CM084274_1_4695205.0, CM084274_1_5028288.1, CM084274_1_42296087.1, CM084267_1_48167440.1, CM084274_1_4808081.0, CM084271_1_3807705.0, CM084275_1_524614.0, CM084265_1_58483282.1, CM084269_1_4628634.0, CM084264_1_68634780.0, CM084265_1_14403559.1, CM084266_1_71166449.1, CM084270_1_8444546.1, CM084273_1_31865957.1, CM084265_1_58483282.0, CM084267_1_6421422.0, CM084269_1_4628639.1, CM084276_1_771542.1, CM084278_1_20734519.0, CM084269_1_1558034.0, CM084272_1_18194995.1, CM084269_1_43529904.0, CM084268_1_49721957.1, CM084276_1_714435.1, CM084272_1_1584317.1",30,"adapter_trim.F1-B15-pH8.bam",-0.38,"adapter_trim.F1-B3-pH8.bam",-0.25,0.63 +"153","adapter_trim.F2-J85-pH8.bam","CM084265_1_60316158.1, CM084270_1_9413290.1, CM084270_1_9413173.1, CM084265_1_72091635.1, CM084269_1_15809964.0, CM084267_1_591197.1, CM084266_1_62462208.0, CM084264_1_73291573.1, CM084267_1_52112064.1, CM084274_1_42296087.1, CM084268_1_50321964.0, CM084265_1_14403401.0, CM084274_1_4773546.0, CM084277_1_1869733.0, CM084264_1_70175564.1, CM084266_1_70396245.0, CM084265_1_71925452.1, CM084267_1_2652515.0, CM084272_1_33617991.0, CM084276_1_1856070.0, CM084272_1_29972645.0, CM084273_1_32683005.0, CM084275_1_39501427.1, CM084264_1_26773649.1, CM084268_1_28845522.0, CM084271_1_30532438.0, CM084264_1_70185106.0, CM084270_1_19464627.0, CM084276_1_1856082.0, CM084276_1_2874135.1",30,"adapter_trim.F1-B8-pH8.bam",-0.47,"adapter_trim.F1-B11-pH8.bam",-0.14,0.61 +"154","adapter_trim.F2-J105-pH8.bam","CM084270_1_9401006.1, CM084265_1_69381524.0, CM084273_1_31863596.1, CM084274_1_4788669.1, CM084268_1_28845446.1, CM084272_1_33571757.1, CM084278_1_24948349.1, CM084273_1_31862476.0, CM084266_1_69625521.0, CM084266_1_65401945.1, CM084269_1_12905566.1, CM084275_1_35722063.1, CM084268_1_3704020.1, CM084278_1_4074311.1, CM084269_1_15799430.1, CM084264_1_2740287.0, CM084275_1_39780930.0, CM084266_1_64725843.1, CM084269_1_1556257.0, CM084271_1_30532519.0, CM084276_1_38864870.1, CM084268_1_50200545.1, CM084270_1_32126089.0, CM084266_1_71166433.0, CM084267_1_6418250.1, CM084264_1_73926179.1, CM084271_1_44086137.1, CM084267_1_2309126.1, CM084276_1_25975836.1, CM084276_1_38489687.0",30,"adapter_trim.F1-B21-pH8.bam",-0.05,"adapter_trim.F1-B9-pH8.bam",-0.17,0.22 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CM084273_1_31862476.0, CM084266_1_69625521.0, CM084266_1_65401945.1, CM084269_1_12905566.1, CM084275_1_35722063.1, CM084268_1_3704020.1, CM084278_1_4074311.1, CM084269_1_15799430.1, CM084264_1_2740287.0, CM084275_1_39780930.0, CM084266_1_64725843.1, CM084269_1_1556257.0, CM084271_1_30532519.0, CM084276_1_38864870.1, CM084268_1_50200545.1, CM084270_1_32126089.0, CM084266_1_71166433.0, CM084267_1_6418250.1, CM084264_1_73926179.1, CM084271_1_44086137.1, CM084267_1_2309126.1, CM084276_1_25975836.1, CM084276_1_38489687.0",30,"adapter_trim.F1-B25-pH8.bam",0.15,"adapter_trim.F1-B4-pH8.bam",-0.22,0.37 +"157","adapter_trim.F2-J123-pH8.bam","CM084266_1_69095439.0, CM084264_1_64487818.1, CM084266_1_63167162.0, CM084266_1_62460100.1, CM084267_1_52593751.0, CM084275_1_39780958.1, CM084275_1_39502454.1, CM084275_1_42592955.1, CM084265_1_59220865.1, CM084279_1_1072380.0, CM084275_1_25395465.0, CM084266_1_66483880.1, CM084272_1_18191744.1, CM084272_1_2073150.0, CM084264_1_69303583.0, 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CM084269_1_15809862.0, CM084267_1_2652526.0, CM084270_1_8242343.1, CM084272_1_1584311.1, CM084274_1_4869924.1, CM084265_1_69004214.0",30,"adapter_trim.F1-B21-pH8.bam",-0.15,"adapter_trim.F1-B5-pH8.bam",0.05,0.2 +"159","adapter_trim.F2-B23-pH8.bam","CM084266_1_69095439.0, CM084264_1_64487818.1, CM084266_1_63167162.0, CM084266_1_62460100.1, CM084267_1_52593751.0, CM084275_1_39780958.1, CM084275_1_39502454.1, CM084275_1_42592955.1, CM084265_1_59220865.1, CM084279_1_1072380.0, CM084275_1_25395465.0, CM084266_1_66483880.1, CM084272_1_18191744.1, CM084272_1_2073150.0, CM084264_1_69303583.0, CM084267_1_700054.0, CM084269_1_42862704.1, CM084275_1_23095308.1, CM084275_1_20000990.0, CM084266_1_70706263.0, CM084266_1_68960407.0, CM084274_1_4694967.1, CM084270_1_4751873.1, CM084276_1_1856653.0, CM084269_1_15809862.0, CM084267_1_2652526.0, CM084270_1_8242343.1, CM084272_1_1584311.1, CM084274_1_4869924.1, 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CM084265_1_71828881.0, CM084269_1_1538788.1, CM084271_1_43868125.1, CM084276_1_2855915.1, CM084266_1_71149029.0, CM084264_1_8098050.1, CM084264_1_72011674.1, CM084265_1_70607188.0, CM084275_1_25393263.0, CM084266_1_59802412.1, CM084269_1_43524472.0, CM084274_1_4870202.0, CM084274_1_21933035.1, CM084276_1_38558670.1, CM084270_1_1553326.0, CM084277_1_17835716.0, CM084279_1_32917233.1, CM084264_1_66439662.0, CM084265_1_790976.0, CM084270_1_47077595.1, CM084265_1_64735166.1, CM084266_1_70396060.1, CM084265_1_64585926.1, CM084270_1_42348998.1, CM084268_1_3699589.1, CM084279_1_10159275.0, CM084265_1_66143662.0, CM084265_1_24901859.0",30,"adapter_trim.F1-B15-pH8.bam",-0.09,"adapter_trim.F1-B5-pH8.bam",-0.5,0.59 +"162","adapter_trim.F2-J83-pH8.bam","CM084265_1_64733351.0, CM084266_1_68322200.1, CM084268_1_42089.0, CM084272_1_33503448.0, CM084264_1_64487818.1, CM084268_1_22040366.1, CM084278_1_20732805.0, CM084267_1_2652518.0, CM084267_1_8687446.1, CM084271_1_10301938.1, CM084266_1_71319410.1, 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CM084269_1_35627054.0, CM084266_1_70930072.1, CM084276_1_38558658.0, CM084265_1_61648709.0, CM084278_1_24948220.0, CM084273_1_31863606.0, CM084266_1_69623581.0, CM084279_1_31065250.0, CM084266_1_64725837.0, CM084267_1_2652774.1, CM084272_1_43469486.0, CM084274_1_4708063.0, CM084279_1_1073112.0, CM084278_1_20861266.0, CM084265_1_66688742.1",30,"adapter_trim.F1-B8-pH8.bam",-0.64,"adapter_trim.F1-B9-pH8.bam",-0.41,1.05 +"189","adapter_trim.F2-B12-pH8.bam","CM084268_1_49721854.1, CM084271_1_44090302.0, CM084274_1_4773546.0, CM084274_1_4671994.1, CM084278_1_20858390.0, CM084264_1_74183870.0, CM084266_1_70531191.1, CM084269_1_42862704.1, CM084271_1_30532519.0, CM084269_1_1567834.0, CM084264_1_73931171.0, CM084271_1_44190420.0, CM084265_1_68806450.0, CM084265_1_64196888.0, CM084278_1_20635947.0, CM084269_1_35627054.0, CM084266_1_70930072.1, CM084276_1_38558658.0, CM084265_1_61648709.0, CM084278_1_24948220.0, CM084273_1_31863606.0, CM084266_1_69623581.0, CM084279_1_31065250.0, CM084266_1_64725837.0, CM084267_1_2652774.1, CM084272_1_43469486.0, CM084274_1_4708063.0, CM084279_1_1073112.0, CM084278_1_20861266.0, CM084265_1_66688742.1",30,"adapter_trim.F1-B8-pH8.bam",-0.26,"adapter_trim.F1-B4-pH8.bam",-0.17,0.43 +"190","adapter_trim.F2-B15-pH8.bam","CM084272_1_2072734.1, CM084269_1_45238254.1, CM084265_1_72078910.0, CM084272_1_36474231.0, CM084271_1_43812187.0, CM084265_1_58530104.0, CM084277_1_29208305.0, CM084275_1_25388576.0, CM084264_1_7131437.1, CM084277_1_18541349.0, CM084274_1_4793084.0, CM084269_1_1549393.1, CM084274_1_4868366.1, CM084265_1_72368293.1, CM084272_1_7002402.0, CM084264_1_73931171.0, CM084278_1_23536960.0, CM084279_1_161176.0, CM084274_1_4867333.0, CM084275_1_39338236.0, CM084274_1_4694494.0, CM084266_1_65576813.1, CM084277_1_29780153.1, CM084267_1_2908966.0, CM084275_1_39776646.1, CM084273_1_31865817.0, CM084265_1_71794444.1, CM084274_1_5566177.1, CM084274_1_34977132.0, CM084265_1_8361584.1",30,"adapter_trim.F1-B25-pH8.bam",-0.31,"adapter_trim.F1-B5-pH8.bam",-0.53,0.84 +"191","adapter_trim.F2-J143-pH8.bam","CM084270_1_47076365.0, CM084267_1_3748455.0, CM084273_1_31866816.1, CM084265_1_72898809.0, CM084266_1_71319410.1, CM084266_1_71149025.0, CM084272_1_33452045.0, CM084274_1_11694583.0, CM084271_1_1034852.1, CM084267_1_727876.1, CM084269_1_43529904.0, CM084266_1_68919260.0, CM084264_1_75506833.1, CM084275_1_39774847.1, CM084274_1_11694910.0, CM084279_1_649298.1, CM084272_1_33578227.1, CM084277_1_18535852.1, CM084276_1_38558604.0, CM084264_1_74721232.1, CM084269_1_43528677.0, CM084265_1_1816612.1, CM084268_1_9292474.0, CM084275_1_312851.0, CM084277_1_29781979.0, CM084271_1_3820313.1, CM084276_1_20157067.1, CM084269_1_35627068.1, CM084269_1_15823100.0, CM084279_1_32641182.0",30,"adapter_trim.F1-B15-pH8.bam",-0.3,"adapter_trim.F1-B4-pH8.bam",0.13,0.43 +"192","adapter_trim.F2-J122-pH8.bam","CM084265_1_64196888.1, CM084271_1_3821125.0, CM084271_1_1052235.0, CM084265_1_1816578.0, CM084266_1_58087794.1, CM084278_1_23536520.1, CM084272_1_33546605.0, CM084271_1_19655964.1, CM084265_1_71925452.1, CM084276_1_54402.1, CM084264_1_34301159.1, CM084269_1_12905592.1, CM084272_1_1726216.1, CM084271_1_23942504.0, CM084276_1_1856070.1, CM084267_1_2426156.1, CM084267_1_2426144.0, CM084274_1_41835817.0, CM084266_1_69632418.1, CM084269_1_15812960.0, CM084266_1_68919260.0, CM084266_1_69141121.1, CM084274_1_5028297.1, CM084268_1_37774069.1, CM084268_1_50681546.0, CM084266_1_68320536.0, CM084266_1_23295925.0, CM084271_1_44073395.0, CM084266_1_70706207.1, CM084268_1_2720906.0",30,"adapter_trim.F1-B8-pH8.bam",0.12,"adapter_trim.F1-B10-pH8.bam",-0.05,0.17 +"193","adapter_trim.F2-J126-pH8.bam","CM084265_1_64196888.1, CM084271_1_3821125.0, CM084271_1_1052235.0, CM084265_1_1816578.0, CM084266_1_58087794.1, CM084278_1_23536520.1, CM084272_1_33546605.0, CM084271_1_19655964.1, CM084265_1_71925452.1, CM084276_1_54402.1, CM084264_1_34301159.1, CM084269_1_12905592.1, CM084272_1_1726216.1, CM084271_1_23942504.0, CM084276_1_1856070.1, CM084267_1_2426156.1, CM084267_1_2426144.0, CM084274_1_41835817.0, CM084266_1_69632418.1, CM084269_1_15812960.0, CM084266_1_68919260.0, CM084266_1_69141121.1, CM084274_1_5028297.1, CM084268_1_37774069.1, CM084268_1_50681546.0, CM084266_1_68320536.0, CM084266_1_23295925.0, CM084271_1_44073395.0, CM084266_1_70706207.1, CM084268_1_2720906.0",30,"adapter_trim.F1-B20-pH8.bam",-0.13,"adapter_trim.F1-B11-pH8.bam",-0.19,0.32 +"194","adapter_trim.F2-J122-pH8.bam","CM084266_1_71149025.1, CM084269_1_42862779.1, CM084270_1_19464627.0, CM084267_1_51167057.1, CM084271_1_760000.1, CM084267_1_5830233.0, CM084268_1_50225498.1, CM084274_1_4868380.0, CM084271_1_43860497.0, CM084266_1_69056442.0, CM084279_1_32971482.0, CM084265_1_72368163.1, CM084265_1_72071414.1, CM084275_1_8878509.1, CM084278_1_20635947.0, CM084267_1_5165711.1, CM084266_1_23295283.0, CM084265_1_59221301.1, CM084266_1_23295949.0, CM084264_1_6517724.0, CM084274_1_4708033.0, CM084270_1_47077463.0, CM084266_1_67098131.0, CM084275_1_39491725.0, CM084275_1_25388546.1, CM084272_1_1311984.1, CM084269_1_47265506.0, CM084265_1_64581822.0, CM084266_1_66377784.0, CM084266_1_64726584.0",30,"adapter_trim.F1-B25-pH8.bam",-0.51,"adapter_trim.F1-B7-pH8.bam",-0.07,0.58 +"195","adapter_trim.F2-J105-pH8.bam","CM084266_1_63167162.1, CM084267_1_6420945.1, CM084279_1_10159270.0, CM084276_1_20157216.0, CM084273_1_268153.1, CM084267_1_591197.1, CM084266_1_57882780.0, CM084265_1_68074259.1, CM084270_1_8242309.0, CM084269_1_15798357.0, CM084273_1_7839386.0, CM084267_1_8118616.0, CM084271_1_44090307.0, CM084265_1_50947034.1, CM084265_1_71463753.1, CM084269_1_39736991.0, CM084279_1_1070313.0, CM084272_1_43469474.0, CM084273_1_10424357.0, CM084266_1_59356462.0, CM084274_1_4778609.1, CM084278_1_23555170.1, CM084274_1_4863903.0, CM084273_1_42287132.0, CM084274_1_4785935.0, CM084265_1_72078910.1, CM084277_1_4875899.1, CM084277_1_5803906.1, CM084274_1_4695106.1, CM084275_1_39780958.0",30,"adapter_trim.F1-B25-pH8.bam",-0.21,"adapter_trim.F1-B5-pH8.bam",0.04,0.25 +"196","adapter_trim.F2-J108-pH8.bam","CM084266_1_63167162.1, CM084267_1_6420945.1, CM084279_1_10159270.0, CM084276_1_20157216.0, CM084273_1_268153.1, CM084267_1_591197.1, CM084266_1_57882780.0, CM084265_1_68074259.1, CM084270_1_8242309.0, CM084269_1_15798357.0, CM084273_1_7839386.0, CM084267_1_8118616.0, CM084271_1_44090307.0, CM084265_1_50947034.1, CM084265_1_71463753.1, CM084269_1_39736991.0, CM084279_1_1070313.0, CM084272_1_43469474.0, CM084273_1_10424357.0, CM084266_1_59356462.0, CM084274_1_4778609.1, CM084278_1_23555170.1, CM084274_1_4863903.0, CM084273_1_42287132.0, CM084274_1_4785935.0, CM084265_1_72078910.1, CM084277_1_4875899.1, CM084277_1_5803906.1, CM084274_1_4695106.1, CM084275_1_39780958.0",30,"adapter_trim.F1-B25-pH8.bam",-0.01,"adapter_trim.F1-B8-pH8.bam",-0.28,0.29 +"197","adapter_trim.F2-J123-pH8.bam","CM084266_1_63167162.1, CM084267_1_6420945.1, CM084279_1_10159270.0, CM084276_1_20157216.0, CM084273_1_268153.1, CM084267_1_591197.1, CM084266_1_57882780.0, CM084265_1_68074259.1, CM084270_1_8242309.0, CM084269_1_15798357.0, CM084273_1_7839386.0, CM084267_1_8118616.0, CM084271_1_44090307.0, CM084265_1_50947034.1, CM084265_1_71463753.1, CM084269_1_39736991.0, CM084279_1_1070313.0, CM084272_1_43469474.0, CM084273_1_10424357.0, CM084266_1_59356462.0, CM084274_1_4778609.1, CM084278_1_23555170.1, CM084274_1_4863903.0, CM084273_1_42287132.0, CM084274_1_4785935.0, CM084265_1_72078910.1, CM084277_1_4875899.1, CM084277_1_5803906.1, CM084274_1_4695106.1, CM084275_1_39780958.0",30,"adapter_trim.F1-B25-pH8.bam",-0.17,"adapter_trim.F1-B8-pH8.bam",-0.49,0.66 +"198","adapter_trim.F2-J127-pH8.bam","CM084266_1_63167162.1, CM084267_1_6420945.1, CM084279_1_10159270.0, CM084276_1_20157216.0, CM084273_1_268153.1, CM084267_1_591197.1, CM084266_1_57882780.0, CM084265_1_68074259.1, CM084270_1_8242309.0, CM084269_1_15798357.0, CM084273_1_7839386.0, CM084267_1_8118616.0, CM084271_1_44090307.0, CM084265_1_50947034.1, CM084265_1_71463753.1, CM084269_1_39736991.0, CM084279_1_1070313.0, CM084272_1_43469474.0, CM084273_1_10424357.0, CM084266_1_59356462.0, CM084274_1_4778609.1, CM084278_1_23555170.1, CM084274_1_4863903.0, CM084273_1_42287132.0, CM084274_1_4785935.0, CM084265_1_72078910.1, CM084277_1_4875899.1, CM084277_1_5803906.1, CM084274_1_4695106.1, CM084275_1_39780958.0",30,"adapter_trim.F1-B8-pH8.bam",-0.06,"adapter_trim.F1-B11-pH8.bam",-0.09,0.15 +"199","adapter_trim.F2-J83-pH8.bam","CM084266_1_63167162.1, CM084267_1_6420945.1, CM084279_1_10159270.0, CM084276_1_20157216.0, CM084273_1_268153.1, CM084267_1_591197.1, CM084266_1_57882780.0, CM084265_1_68074259.1, CM084270_1_8242309.0, CM084269_1_15798357.0, CM084273_1_7839386.0, CM084267_1_8118616.0, CM084271_1_44090307.0, CM084265_1_50947034.1, CM084265_1_71463753.1, CM084269_1_39736991.0, CM084279_1_1070313.0, CM084272_1_43469474.0, CM084273_1_10424357.0, CM084266_1_59356462.0, CM084274_1_4778609.1, CM084278_1_23555170.1, CM084274_1_4863903.0, CM084273_1_42287132.0, CM084274_1_4785935.0, CM084265_1_72078910.1, CM084277_1_4875899.1, CM084277_1_5803906.1, CM084274_1_4695106.1, CM084275_1_39780958.0",30,"adapter_trim.F1-B21-pH8.bam",0.03,"adapter_trim.F1-B1-pH8.bam",-0.25,0.28 +"200","adapter_trim.F2-J104-pH8.bam","CM084279_1_1070313.0, CM084276_1_37353183.1, CM084275_1_19996650.1, CM084273_1_9136147.1, CM084276_1_2841302.0, CM084267_1_727876.1, CM084271_1_19655939.1, CM084267_1_1134424.0, CM084266_1_64002736.0, CM084274_1_4792352.0, CM084277_1_31027250.1, CM084271_1_346616.1, CM084269_1_1567360.0, CM084272_1_33571767.1, CM084275_1_524647.1, CM084266_1_69141117.1, CM084269_1_35627205.0, CM084268_1_28845446.1, CM084264_1_34300493.0, CM084278_1_20689098.0, CM084266_1_50301559.0, CM084266_1_66383611.1, CM084266_1_68960407.1, CM084274_1_4694190.0, CM084271_1_43868201.0, CM084272_1_33515314.0, CM084270_1_13944196.0, CM084264_1_34300042.0, CM084277_1_29208395.0, CM084264_1_64269877.1",30,"adapter_trim.F1-B8-pH8.bam",0.12,"adapter_trim.F1-B1-pH8.bam",-0.23,0.35 +"201","adapter_trim.F2-J146-pH8.bam","CM084279_1_1070313.0, CM084276_1_37353183.1, CM084275_1_19996650.1, CM084273_1_9136147.1, CM084276_1_2841302.0, CM084267_1_727876.1, CM084271_1_19655939.1, CM084267_1_1134424.0, CM084266_1_64002736.0, CM084274_1_4792352.0, CM084277_1_31027250.1, CM084271_1_346616.1, CM084269_1_1567360.0, CM084272_1_33571767.1, CM084275_1_524647.1, CM084266_1_69141117.1, CM084269_1_35627205.0, CM084268_1_28845446.1, CM084264_1_34300493.0, CM084278_1_20689098.0, CM084266_1_50301559.0, CM084266_1_66383611.1, CM084266_1_68960407.1, CM084274_1_4694190.0, CM084271_1_43868201.0, CM084272_1_33515314.0, CM084270_1_13944196.0, CM084264_1_34300042.0, CM084277_1_29208395.0, CM084264_1_64269877.1",30,"adapter_trim.F1-B20-pH8.bam",-0.01,"adapter_trim.F1-B8-pH8.bam",-0.12,0.13 +"202","adapter_trim.F2-J86-pH8.bam","CM084279_1_1070313.0, CM084276_1_37353183.1, CM084275_1_19996650.1, CM084273_1_9136147.1, CM084276_1_2841302.0, CM084267_1_727876.1, CM084271_1_19655939.1, CM084267_1_1134424.0, CM084266_1_64002736.0, CM084274_1_4792352.0, CM084277_1_31027250.1, CM084271_1_346616.1, CM084269_1_1567360.0, CM084272_1_33571767.1, CM084275_1_524647.1, CM084266_1_69141117.1, CM084269_1_35627205.0, CM084268_1_28845446.1, CM084264_1_34300493.0, CM084278_1_20689098.0, CM084266_1_50301559.0, CM084266_1_66383611.1, CM084266_1_68960407.1, CM084274_1_4694190.0, CM084271_1_43868201.0, CM084272_1_33515314.0, CM084270_1_13944196.0, CM084264_1_34300042.0, CM084277_1_29208395.0, CM084264_1_64269877.1",30,"adapter_trim.F1-B15-pH8.bam",-0.35,"adapter_trim.F1-B3-pH8.bam",-0.09,0.44 +"203","adapter_trim.F2-J85-pH8.bam","CM084266_1_57882079.0, CM084279_1_161440.1, CM084270_1_47103340.0, CM084278_1_22665046.1, CM084265_1_69007607.0, CM084276_1_31737936.0, CM084274_1_4863965.1, CM084268_1_50219227.0, CM084274_1_34977105.0, CM084264_1_26773675.1, CM084264_1_74191574.0, CM084266_1_69625511.0, CM084265_1_64832885.1, CM084270_1_26884058.0, CM084264_1_73349423.1, CM084265_1_64196855.1, CM084275_1_312842.1, CM084275_1_23083657.1, CM084264_1_26771547.1, CM084276_1_38559646.1, CM084264_1_65422.0, CM084271_1_1033937.1, CM084278_1_22667307.0, CM084276_1_2874135.1, CM084271_1_19655871.0, CM084266_1_70195701.1, CM084268_1_28845501.0, CM084273_1_9136147.0, CM084279_1_161458.0, CM084274_1_4862958.1",30,"adapter_trim.F1-B15-pH8.bam",0.01,"adapter_trim.F1-B8-pH8.bam",-0.05,0.06 +"204","adapter_trim.F2-J141-pH8.bam","CM084268_1_3692649.1, CM084276_1_38271843.1, CM084265_1_64735335.0, CM084265_1_64196888.1, CM084264_1_6990362.1, CM084279_1_1073112.0, CM084275_1_1304702.1, CM084272_1_33597692.1, CM084267_1_50392657.1, CM084279_1_16586120.1, CM084275_1_120896.0, CM084265_1_70980049.0, CM084268_1_22932623.0, CM084275_1_66842.0, CM084271_1_257149.0, CM084266_1_63468234.0, CM084265_1_59221220.1, CM084269_1_1567848.0, CM084266_1_69051092.0, CM084266_1_58915367.0, CM084267_1_11257262.1, CM084266_1_68659869.0, CM084275_1_39780930.0, CM084264_1_70175551.1, CM084270_1_9413290.1, CM084264_1_72054052.1, CM084278_1_279490.1, CM084270_1_8244653.0, CM084271_1_1052214.1, CM084279_1_32666410.0",30,"adapter_trim.F1-B25-pH8.bam",-0.2,"adapter_trim.F1-B9-pH8.bam",-0.21,0.41 +"205","adapter_trim.F2-J143-pH8.bam","CM084268_1_3692649.1, CM084276_1_38271843.1, CM084265_1_64735335.0, CM084265_1_64196888.1, CM084264_1_6990362.1, CM084279_1_1073112.0, CM084275_1_1304702.1, CM084272_1_33597692.1, CM084267_1_50392657.1, CM084279_1_16586120.1, CM084275_1_120896.0, CM084265_1_70980049.0, CM084268_1_22932623.0, CM084275_1_66842.0, CM084271_1_257149.0, CM084266_1_63468234.0, CM084265_1_59221220.1, CM084269_1_1567848.0, CM084266_1_69051092.0, CM084266_1_58915367.0, CM084267_1_11257262.1, CM084266_1_68659869.0, CM084275_1_39780930.0, CM084264_1_70175551.1, CM084270_1_9413290.1, CM084264_1_72054052.1, CM084278_1_279490.1, CM084270_1_8244653.0, CM084271_1_1052214.1, 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CM084268_1_49533758.1",30,"adapter_trim.F1-B15-pH8.bam",-0.14,"adapter_trim.F1-B5-pH8.bam",-0.42,0.56 +"211","adapter_trim.F2-J122-pH8.bam","CM084267_1_50994309.0, CM084268_1_3692649.0, CM084269_1_42862775.1, CM084269_1_4635085.1, CM084267_1_2426144.0, CM084268_1_45574.1, CM084265_1_68798193.1, CM084279_1_1060874.1, CM084275_1_39502397.0, CM084265_1_68798193.0, CM084264_1_66439628.1, CM084274_1_4778496.0, CM084269_1_43524691.0, CM084274_1_4773524.1, CM084266_1_69623578.0, CM084267_1_6420853.0, CM084265_1_64832885.0, CM084267_1_4505277.0, CM084268_1_82245.0, CM084276_1_1625423.1, CM084264_1_8112731.0, CM084266_1_68322200.1, CM084276_1_6150174.0, CM084274_1_4778496.1, CM084265_1_64784798.0, CM084265_1_59221275.1, CM084276_1_38117403.0, CM084268_1_2706209.0, CM084266_1_69051080.1, CM084268_1_49533758.1",30,"adapter_trim.F1-B20-pH8.bam",0.13,"adapter_trim.F1-B8-pH8.bam",-0.07,0.2 +"212","adapter_trim.F2-J141-pH8.bam","CM084267_1_50994309.0, CM084268_1_3692649.0, CM084269_1_42862775.1, CM084269_1_4635085.1, CM084267_1_2426144.0, CM084268_1_45574.1, CM084265_1_68798193.1, CM084279_1_1060874.1, CM084275_1_39502397.0, CM084265_1_68798193.0, CM084264_1_66439628.1, CM084274_1_4778496.0, CM084269_1_43524691.0, CM084274_1_4773524.1, CM084266_1_69623578.0, CM084267_1_6420853.0, CM084265_1_64832885.0, CM084267_1_4505277.0, CM084268_1_82245.0, CM084276_1_1625423.1, CM084264_1_8112731.0, CM084266_1_68322200.1, CM084276_1_6150174.0, CM084274_1_4778496.1, CM084265_1_64784798.0, CM084265_1_59221275.1, CM084276_1_38117403.0, CM084268_1_2706209.0, CM084266_1_69051080.1, CM084268_1_49533758.1",30,"adapter_trim.F1-B15-pH8.bam",-0.16,"adapter_trim.F1-B10-pH8.bam",-0.06,0.22 +"213","adapter_trim.F2-J86-pH8.bam","CM084267_1_50994309.0, CM084268_1_3692649.0, CM084269_1_42862775.1, CM084269_1_4635085.1, CM084267_1_2426144.0, CM084268_1_45574.1, CM084265_1_68798193.1, CM084279_1_1060874.1, CM084275_1_39502397.0, CM084265_1_68798193.0, CM084264_1_66439628.1, CM084274_1_4778496.0, CM084269_1_43524691.0, CM084274_1_4773524.1, CM084266_1_69623578.0, CM084267_1_6420853.0, CM084265_1_64832885.0, CM084267_1_4505277.0, CM084268_1_82245.0, CM084276_1_1625423.1, CM084264_1_8112731.0, CM084266_1_68322200.1, CM084276_1_6150174.0, CM084274_1_4778496.1, CM084265_1_64784798.0, CM084265_1_59221275.1, CM084276_1_38117403.0, CM084268_1_2706209.0, CM084266_1_69051080.1, CM084268_1_49533758.1",30,"adapter_trim.F1-B8-pH8.bam",-0.07,"adapter_trim.F1-B1-pH8.bam",-0.12,0.19 +"214","adapter_trim.F2-J141-pH8.bam","CM084275_1_39394528.1, CM084265_1_64584031.0, CM084265_1_8362532.1, CM084277_1_30611507.1, CM084264_1_64875158.1, CM084268_1_50739238.1, CM084266_1_70396060.1, CM084279_1_28791311.0, CM084274_1_4864682.1, CM084264_1_34300494.1, CM084276_1_771542.1, CM084266_1_68319474.0, CM084268_1_28845855.1, CM084270_1_46587592.1, CM084272_1_2073148.1, CM084267_1_2163704.0, CM084268_1_2713890.0, CM084277_1_30642880.1, CM084276_1_62244.1, CM084276_1_61700.1, CM084265_1_790962.1, CM084276_1_38772835.0, CM084268_1_50323442.0, CM084274_1_4708063.1, CM084275_1_272975.0, CM084276_1_38558602.1, CM084274_1_4862951.1, CM084275_1_39776496.0, CM084265_1_71797896.0, CM084279_1_10157010.1",30,"adapter_trim.F1-B15-pH8.bam",-0.13,"adapter_trim.F1-B1-pH8.bam",-0.29,0.42 +"215","adapter_trim.F2-J147-pH8.bam","CM084275_1_39394528.1, CM084265_1_64584031.0, CM084265_1_8362532.1, CM084277_1_30611507.1, CM084264_1_64875158.1, CM084268_1_50739238.1, CM084266_1_70396060.1, CM084279_1_28791311.0, CM084274_1_4864682.1, CM084264_1_34300494.1, CM084276_1_771542.1, CM084266_1_68319474.0, CM084268_1_28845855.1, CM084270_1_46587592.1, CM084272_1_2073148.1, CM084267_1_2163704.0, CM084268_1_2713890.0, CM084277_1_30642880.1, CM084276_1_62244.1, CM084276_1_61700.1, CM084265_1_790962.1, CM084276_1_38772835.0, CM084268_1_50323442.0, CM084274_1_4708063.1, CM084275_1_272975.0, CM084276_1_38558602.1, CM084274_1_4862951.1, CM084275_1_39776496.0, CM084265_1_71797896.0, CM084279_1_10157010.1",30,"adapter_trim.F1-B25-pH8.bam",0.07,"adapter_trim.F1-B10-pH8.bam",-0.09,0.16 +"216","adapter_trim.F2-J125-pH8.bam","CM084274_1_11694583.1, CM084271_1_3814148.1, CM084271_1_342830.1, CM084264_1_69870956.0, CM084269_1_12905566.0, CM084267_1_5161036.0, CM084264_1_70175500.0, CM084268_1_1508040.1, CM084264_1_73311139.1, CM084279_1_32917232.1, CM084273_1_32698908.1, CM084264_1_70188206.1, CM084265_1_68807634.1, CM084277_1_29780153.1, CM084265_1_72071376.0, CM084266_1_69085566.0, CM084266_1_69314162.0, CM084267_1_2135737.1, CM084269_1_43525146.1, CM084265_1_71794141.0, CM084264_1_64487818.1, CM084264_1_70391024.1, CM084274_1_4695106.1, CM084275_1_29098881.0, CM084266_1_46766313.1, CM084265_1_68868190.0, CM084275_1_319819.1, CM084270_1_4751880.0, CM084264_1_34294487.0, CM084268_1_18512752.1",30,"adapter_trim.F1-B21-pH8.bam",-0.33,"adapter_trim.F1-B1-pH8.bam",-0.39,0.72 +"217","adapter_trim.F2-J86-pH8.bam","CM084274_1_11694583.1, CM084271_1_3814148.1, CM084271_1_342830.1, CM084264_1_69870956.0, CM084269_1_12905566.0, CM084267_1_5161036.0, CM084264_1_70175500.0, CM084268_1_1508040.1, CM084264_1_73311139.1, CM084279_1_32917232.1, CM084273_1_32698908.1, CM084264_1_70188206.1, CM084265_1_68807634.1, CM084277_1_29780153.1, CM084265_1_72071376.0, CM084266_1_69085566.0, CM084266_1_69314162.0, CM084267_1_2135737.1, CM084269_1_43525146.1, CM084265_1_71794141.0, CM084264_1_64487818.1, CM084264_1_70391024.1, CM084274_1_4695106.1, CM084275_1_29098881.0, CM084266_1_46766313.1, CM084265_1_68868190.0, CM084275_1_319819.1, CM084270_1_4751880.0, CM084264_1_34294487.0, CM084268_1_18512752.1",30,"adapter_trim.F1-B8-pH8.bam",0.07,"adapter_trim.F1-B5-pH8.bam",0,0.07 +"218","adapter_trim.F2-J122-pH8.bam","CM084269_1_39737147.1, CM084267_1_2910789.1, CM084276_1_2841302.0, CM084279_1_1064680.1, CM084265_1_60313980.1, CM084264_1_69748575.1, CM084264_1_34294660.0, CM084264_1_64487845.1, CM084265_1_71265241.1, CM084278_1_20732803.0, CM084264_1_72054053.1, CM084265_1_72990731.1, CM084271_1_3821161.0, CM084272_1_33616442.1, CM084265_1_72071376.0, CM084277_1_30631454.0, CM084279_1_10149541.0, CM084272_1_18191738.1, CM084276_1_38271842.1, CM084269_1_40438751.1, CM084266_1_69052082.0, CM084265_1_66142270.0, CM084269_1_15823423.0, CM084271_1_30532401.0, CM084271_1_1052235.1, CM084265_1_59221281.0, CM084269_1_46688892.1, CM084265_1_73060812.1, CM084274_1_4862951.1, CM084265_1_72637027.1",30,"adapter_trim.F1-B20-pH8.bam",-0.26,"adapter_trim.F1-B9-pH8.bam",-0.31,0.57 +"219","adapter_trim.F2-J123-pH8.bam","CM084269_1_39737147.1, CM084267_1_2910789.1, CM084276_1_2841302.0, CM084279_1_1064680.1, CM084265_1_60313980.1, CM084264_1_69748575.1, CM084264_1_34294660.0, CM084264_1_64487845.1, CM084265_1_71265241.1, CM084278_1_20732803.0, CM084264_1_72054053.1, CM084265_1_72990731.1, CM084271_1_3821161.0, CM084272_1_33616442.1, CM084265_1_72071376.0, CM084277_1_30631454.0, CM084279_1_10149541.0, CM084272_1_18191738.1, CM084276_1_38271842.1, 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CM084265_1_73060812.1, CM084274_1_4862951.1, CM084265_1_72637027.1",30,"adapter_trim.F1-B20-pH8.bam",-0.39,"adapter_trim.F1-B9-pH8.bam",-0.17,0.56 diff --git a/RAnalysis/Output/Popgen/parentage_sequoia/F1BF2O/Low/F1BF2O_Low_summary.csv b/RAnalysis/Output/Popgen/parentage_sequoia/F1BF2O/Low/F1BF2O_Low_summary.csv new file mode 100644 index 0000000..371001f --- /dev/null +++ b/RAnalysis/Output/Popgen/parentage_sequoia/F1BF2O/Low/F1BF2O_Low_summary.csv @@ -0,0 +1,221 @@ +"","sire","dam","id","loci","n.loci","LLRdam","LLRsire","absLLRtotal","dam.batch","sire.batch","Fertilization_pairs" +"1","adapter_trim.F1-B1-pH8.bam","adapter_trim.F1-B21-pH8.bam","adapter_trim.F2-B23-pH8.bam","CM084265_1_64733351.0, CM084266_1_68322200.1, CM084268_1_42089.0, CM084272_1_33503448.0, CM084264_1_64487818.1, CM084268_1_22040366.1, CM084278_1_20732805.0, CM084267_1_2652518.0, CM084267_1_8687446.1, CM084271_1_10301938.1, CM084266_1_71319410.1, CM084275_1_23104495.0, CM084264_1_26773690.1, 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CM084268_1_50225502.0, CM084266_1_58111750.0, CM084265_1_59221383.0, CM084266_1_58086170.1, CM084271_1_44090335.1, CM084265_1_70577871.1, CM084266_1_64723817.0, CM084267_1_3748455.1, CM084271_1_19655226.1, CM084274_1_4863343.1, CM084269_1_1544562.1, CM084269_1_15798363.0","30","0.1","0.05","0.15","2","1, 4","FALSE" +"220","adapter_trim.F1-B9-pH8.bam","adapter_trim.F1-B8-pH8.bam","adapter_trim.F2-J146-pH8.bam","CM084268_1_49721854.1, CM084271_1_44090302.0, CM084274_1_4773546.0, CM084274_1_4671994.1, CM084278_1_20858390.0, CM084264_1_74183870.0, CM084266_1_70531191.1, CM084269_1_42862704.1, CM084271_1_30532519.0, CM084269_1_1567834.0, CM084264_1_73931171.0, CM084271_1_44190420.0, CM084265_1_68806450.0, CM084265_1_64196888.0, CM084278_1_20635947.0, CM084269_1_35627054.0, CM084266_1_70930072.1, CM084276_1_38558658.0, CM084265_1_61648709.0, CM084278_1_24948220.0, CM084273_1_31863606.0, CM084266_1_69623581.0, CM084279_1_31065250.0, CM084266_1_64725837.0, CM084267_1_2652774.1, CM084272_1_43469486.0, CM084274_1_4708063.0, CM084279_1_1073112.0, CM084278_1_20861266.0, CM084265_1_66688742.1","30","-0.64","-0.41","1.05","1","1, 4","TRUE" diff --git a/RAnalysis/Output/Popgen/parentage_sequoia/F1BF2O/Moderate/F1BF2O_Mod_final.csv b/RAnalysis/Output/Popgen/parentage_sequoia/F1BF2O/Moderate/F1BF2O_Mod_final.csv new file mode 100644 index 0000000..b70f272 --- /dev/null +++ b/RAnalysis/Output/Popgen/parentage_sequoia/F1BF2O/Moderate/F1BF2O_Mod_final.csv @@ -0,0 +1,48 @@ +"","id","dam","sire","absLLRtotal","Fertilization_pairs","loci" +"1","adapter_trim.F2-J63-pH75.bam","adapter_trim.F1-B11-pH75.bam","adapter_trim.F1-B1-pH75.bam",0.55,TRUE,"CM084279_1_10151169.1, CM084276_1_4125650.1, CM084265_1_72071366.1, CM084273_1_42287132.0, CM084269_1_4628634.1, CM084278_1_20858390.0, CM084276_1_38072633.0, CM084264_1_75512070.0, CM084264_1_34291216.0, CM084271_1_26325742.0, CM084265_1_64735166.0, CM084279_1_1073112.0, CM084265_1_70979988.1, CM084269_1_1538788.0, CM084279_1_1871842.1, CM084272_1_18194019.0, CM084279_1_1070264.1, CM084266_1_58093839.0, CM084276_1_38970477.1, CM084265_1_72992174.1, CM084265_1_70979994.1, CM084264_1_74989689.1, CM084265_1_73060616.0, CM084277_1_30168102.0, CM084264_1_26773675.0, CM084266_1_38532344.1, CM084278_1_281214.1, CM084264_1_2737868.0, CM084273_1_4090291.0, CM084265_1_71792056.1" +"2","adapter_trim.F2-J24-pH75.bam","adapter_trim.F1-B16-pH75.bam","adapter_trim.F1-B1-pH75.bam",0.6,FALSE,"CM084264_1_66439628.0, CM084274_1_4868380.1, CM084271_1_274110.0, CM084273_1_32683002.0, CM084265_1_66688742.1, CM084266_1_57886823.1, CM084269_1_12905562.0, CM084275_1_675849.0, CM084266_1_70181797.1, CM084268_1_42010.0, CM084269_1_43525214.1, CM084278_1_20625578.0, CM084279_1_10156951.0, CM084266_1_57882606.0, CM084266_1_63466127.1, CM084265_1_64735440.0, CM084270_1_47077465.1, CM084265_1_69381551.1, CM084277_1_36519423.1, CM084267_1_48167440.0, CM084271_1_3818665.1, CM084275_1_1304748.0, CM084276_1_1625257.1, CM084265_1_64196870.0, CM084266_1_69141161.0, CM084264_1_34300493.1, CM084271_1_289999.1, CM084268_1_2832731.0, CM084272_1_36474231.0, CM084278_1_22664889.1" +"3","adapter_trim.F2-J13-pH75.bam","adapter_trim.F1-B12-pH75.bam","adapter_trim.F1-B1-pH75.bam",1.32,FALSE,"CM084269_1_43529904.0, CM084279_1_1070313.1, CM084268_1_24030545.1, CM084264_1_70190068.0, CM084266_1_23298342.1, CM084266_1_23321836.1, CM084276_1_38960936.1, CM084266_1_57886153.1, CM084274_1_4861946.1, CM084264_1_72054205.1, CM084264_1_75512070.0, CM084278_1_20591212.1, CM084276_1_4125650.1, CM084274_1_21933150.0, CM084264_1_6956700.0, CM084269_1_46693817.0, CM084270_1_47077465.0, CM084270_1_4921029.0, CM084276_1_37352422.0, CM084267_1_6421475.0, CM084268_1_41971.1, CM084268_1_50681537.1, CM084273_1_31861630.0, CM084277_1_1869733.0, CM084278_1_22667323.0, CM084268_1_42211.0, CM084276_1_2841292.1, CM084271_1_379011.0, CM084264_1_70466179.1, CM084268_1_50693763.0" +"4","adapter_trim.F2-B17-pH75.bam","adapter_trim.F1-B12-pH75.bam","adapter_trim.F1-B1-pH75.bam",1.17,FALSE,"CM084269_1_43529904.0, CM084279_1_1070313.1, CM084268_1_24030545.1, CM084264_1_70190068.0, CM084266_1_23298342.1, CM084266_1_23321836.1, CM084276_1_38960936.1, CM084266_1_57886153.1, CM084274_1_4861946.1, CM084264_1_72054205.1, CM084264_1_75512070.0, CM084278_1_20591212.1, CM084276_1_4125650.1, CM084274_1_21933150.0, CM084264_1_6956700.0, CM084269_1_46693817.0, CM084270_1_47077465.0, CM084270_1_4921029.0, CM084276_1_37352422.0, CM084267_1_6421475.0, CM084268_1_41971.1, CM084268_1_50681537.1, CM084273_1_31861630.0, CM084277_1_1869733.0, CM084278_1_22667323.0, CM084268_1_42211.0, CM084276_1_2841292.1, CM084271_1_379011.0, CM084264_1_70466179.1, CM084268_1_50693763.0" +"5","adapter_trim.F2-B21-pH75.bam","adapter_trim.F1-B11-pH75.bam","adapter_trim.F1-B1-pH75.bam",1.04,TRUE,"CM084265_1_64585926.0, CM084276_1_56075.1, CM084276_1_4125650.1, CM084276_1_54402.0, CM084276_1_1500490.0, CM084266_1_69793931.0, CM084265_1_71827811.1, CM084267_1_5881718.0, CM084266_1_69141121.1, CM084264_1_70456944.1, CM084275_1_29098876.1, CM084272_1_18194995.1, CM084266_1_69051064.0, CM084265_1_60316111.0, CM084275_1_39502454.0, CM084279_1_1073128.1, CM084265_1_72368172.0, CM084264_1_69870956.0, CM084270_1_19464591.0, CM084276_1_38787722.0, CM084264_1_70471566.0, CM084265_1_71265272.0, CM084278_1_4074392.0, CM084274_1_4708733.1, CM084266_1_64725838.0, CM084278_1_279354.0, CM084271_1_379057.0, CM084278_1_20867809.0, CM084273_1_31862197.0, CM084265_1_72991915.1" +"6","adapter_trim.F2-J51-pH75.bam","adapter_trim.F1-B21-pH75.bam","adapter_trim.F1-B1-pH75.bam",0.33,TRUE,"CM084279_1_10151202.1, CM084265_1_64585921.0, CM084267_1_6420929.0, CM084266_1_64725843.1, CM084271_1_44104310.0, CM084278_1_22645215.0, CM084268_1_1508040.0, CM084276_1_38775920.1, CM084265_1_72636285.1, CM084269_1_43523945.0, CM084279_1_10151202.1, CM084274_1_42294261.0, CM084269_1_15813148.0, CM084275_1_39500153.0, CM084272_1_43331300.1, CM084264_1_65945.0, CM084264_1_2740285.1, CM084279_1_16586112.0, CM084269_1_15828545.0, CM084264_1_69902275.1, CM084274_1_4695205.1, CM084264_1_73886234.1, CM084271_1_44105575.0, CM084265_1_64196884.1, CM084271_1_43860417.1, CM084266_1_63195133.1, CM084270_1_46588167.1, CM084267_1_52896140.1, CM084274_1_4694578.1, CM084279_1_32973101.1" +"7","adapter_trim.F2-J50-pH75.bam","adapter_trim.F1-B16-pH75.bam","adapter_trim.F1-B1-pH75.bam",1.23,FALSE,"CM084275_1_2509498.1, CM084279_1_161074.1, CM084276_1_54402.0, CM084274_1_4863301.1, CM084266_1_70743740.0, CM084276_1_12392697.1, CM084264_1_70175562.0, CM084274_1_4773492.0, CM084266_1_69315458.0, CM084266_1_57882847.0, CM084271_1_43934405.0, CM084265_1_60313980.1, CM084271_1_19655912.1, CM084269_1_47265300.0, CM084264_1_70456944.1, CM084278_1_32252661.1, CM084270_1_9401006.0, CM084278_1_4074395.0, CM084270_1_47076316.0, CM084266_1_64164374.0, CM084268_1_3703420.0, CM084264_1_73311149.1, CM084264_1_66522465.0, CM084271_1_43816629.1, CM084274_1_4720394.0, CM084274_1_4793160.1, CM084269_1_12905562.1, CM084279_1_32662843.0, CM084276_1_38558585.1, CM084278_1_22645215.1" +"8","adapter_trim.F2-J31-pH75.bam","adapter_trim.F1-B16-pH75.bam","adapter_trim.F1-B1-pH75.bam",1.34,FALSE,"CM084270_1_2585592.1, CM084278_1_20623588.1, CM084278_1_20630020.0, CM084266_1_70706263.0, CM084271_1_3821267.0, CM084264_1_72075482.1, CM084278_1_5144747.0, CM084265_1_70974986.0, CM084275_1_38995359.1, CM084264_1_73931171.0, CM084279_1_31409578.1, CM084269_1_4628639.1, CM084271_1_290137.0, CM084267_1_5881762.0, CM084276_1_4125650.1, CM084266_1_69051080.0, CM084274_1_4726638.0, CM084279_1_1079183.0, CM084264_1_15064482.0, CM084266_1_66483855.1, CM084269_1_4625304.0, CM084264_1_61227529.1, CM084268_1_28845823.1, CM084271_1_43868181.1, CM084276_1_12399731.0, CM084272_1_44059306.0, CM084271_1_218855.1, CM084270_1_39395914.1, CM084275_1_2509950.0, CM084275_1_529178.0" 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CM084273_1_31866838.1, CM084273_1_10381194.0, CM084277_1_29780641.1, CM084279_1_32649961.0, CM084279_1_10147284.1, CM084275_1_38995260.0, CM084274_1_6125560.0, CM084272_1_33515314.1, CM084269_1_1541112.1, CM084279_1_649336.1, CM084265_1_50947034.1, CM084267_1_8118654.0, CM084269_1_15799390.1, CM084265_1_71925486.1, CM084271_1_44107457.0, CM084271_1_44090307.0, CM084275_1_120896.1, CM084278_1_20591181.1, CM084272_1_33597692.1, CM084273_1_31863606.1, CM084274_1_4867255.1, CM084268_1_3692649.1, CM084272_1_18194306.0, CM084270_1_972098.0, CM084265_1_64584031.1, CM084265_1_72636291.0" +"11","adapter_trim.F2-J64-pH75.bam","adapter_trim.F1-B17-pH75.bam","adapter_trim.F1-B1-pH75.bam",1,TRUE,"CM084279_1_1072330.0, CM084268_1_3691704.1, CM084264_1_70466154.0, CM084277_1_31027256.0, CM084271_1_39686056.1, CM084266_1_63195133.0, CM084274_1_12659015.0, CM084268_1_50321875.1, CM084272_1_11675265.0, CM084267_1_6421227.1, CM084266_1_69806294.0, CM084279_1_32666444.0, CM084276_1_38557410.1, CM084276_1_38773527.0, CM084277_1_30611564.1, CM084279_1_10156950.1, CM084265_1_73061238.0, CM084278_1_16774412.1, CM084264_1_8098035.0, CM084265_1_72992174.1, CM084276_1_25975836.1, CM084266_1_66377772.1, CM084265_1_66141830.1, CM084266_1_69547380.0, CM084276_1_38772810.0, CM084266_1_69052082.0, CM084277_1_29781979.0, CM084264_1_73927178.1, CM084268_1_28851946.0, CM084266_1_61737006.1" +"12","adapter_trim.F2-J61-pH75.bam","adapter_trim.F1-B16-pH75.bam","adapter_trim.F1-B1-pH75.bam",0.69,FALSE,"CM084270_1_2585592.1, CM084278_1_20623588.1, CM084278_1_20630020.0, CM084266_1_70706263.0, CM084271_1_3821267.0, CM084264_1_72075482.1, CM084278_1_5144747.0, CM084265_1_70974986.0, CM084275_1_38995359.1, CM084264_1_73931171.0, CM084279_1_31409578.1, CM084269_1_4628639.1, CM084271_1_290137.0, CM084267_1_5881762.0, CM084276_1_4125650.1, CM084266_1_69051080.0, CM084274_1_4726638.0, CM084279_1_1079183.0, CM084264_1_15064482.0, CM084266_1_66483855.1, CM084269_1_4625304.0, CM084264_1_61227529.1, 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CM084264_1_70173624.1, CM084278_1_4074392.0, CM084274_1_4864709.0, CM084274_1_4795903.1, CM084270_1_19461856.1, CM084279_1_649298.0, CM084279_1_32662843.0, CM084278_1_22665042.0" diff --git a/RAnalysis/Output/Popgen/parentage_sequoia/F1BF2O/Moderate/F1BF2O_Mod_raw.csv b/RAnalysis/Output/Popgen/parentage_sequoia/F1BF2O/Moderate/F1BF2O_Mod_raw.csv new file mode 100644 index 0000000..1c22c4e --- /dev/null +++ b/RAnalysis/Output/Popgen/parentage_sequoia/F1BF2O/Moderate/F1BF2O_Mod_raw.csv @@ -0,0 +1,291 @@ +"","id","loci","n.loci","dam","LLRdam","sire","LLRsire","absLLRtotal" +"1","adapter_trim.F2-J46-pH75.bam","CM084266_1_57889092.0, CM084272_1_1584317.1, CM084272_1_33617974.0, CM084272_1_43331300.1, CM084273_1_31866838.1, CM084273_1_10381194.0, CM084277_1_29780641.1, CM084279_1_32649961.0, CM084279_1_10147284.1, CM084275_1_38995260.0, CM084274_1_6125560.0, CM084272_1_33515314.1, CM084269_1_1541112.1, CM084279_1_649336.1, CM084265_1_50947034.1, CM084267_1_8118654.0, CM084269_1_15799390.1, CM084265_1_71925486.1, CM084271_1_44107457.0, CM084271_1_44090307.0, CM084275_1_120896.1, CM084278_1_20591181.1, CM084272_1_33597692.1, CM084273_1_31863606.1, CM084274_1_4867255.1, CM084268_1_3692649.1, CM084272_1_18194306.0, CM084270_1_972098.0, CM084265_1_64584031.1, CM084265_1_72636291.0",30,"adapter_trim.F1-B17-pH75.bam",-0.42,"adapter_trim.F1-B4-pH75.bam",-0.23,0.65 +"2","adapter_trim.F2-J64-pH75.bam","CM084266_1_57889092.0, CM084272_1_1584317.1, CM084272_1_33617974.0, CM084272_1_43331300.1, CM084273_1_31866838.1, CM084273_1_10381194.0, CM084277_1_29780641.1, CM084279_1_32649961.0, CM084279_1_10147284.1, CM084275_1_38995260.0, CM084274_1_6125560.0, CM084272_1_33515314.1, CM084269_1_1541112.1, CM084279_1_649336.1, CM084265_1_50947034.1, CM084267_1_8118654.0, CM084269_1_15799390.1, CM084265_1_71925486.1, CM084271_1_44107457.0, CM084271_1_44090307.0, CM084275_1_120896.1, CM084278_1_20591181.1, CM084272_1_33597692.1, CM084273_1_31863606.1, CM084274_1_4867255.1, CM084268_1_3692649.1, CM084272_1_18194306.0, CM084270_1_972098.0, CM084265_1_64584031.1, CM084265_1_72636291.0",30,"adapter_trim.F1-B6-pH75.bam",-0.2,"adapter_trim.F1-B8-pH75.bam",-0.03,0.23 +"3","adapter_trim.F2-J8-pH75.bam","CM084266_1_57889092.0, CM084272_1_1584317.1, CM084272_1_33617974.0, CM084272_1_43331300.1, CM084273_1_31866838.1, CM084273_1_10381194.0, CM084277_1_29780641.1, CM084279_1_32649961.0, CM084279_1_10147284.1, CM084275_1_38995260.0, CM084274_1_6125560.0, CM084272_1_33515314.1, CM084269_1_1541112.1, CM084279_1_649336.1, CM084265_1_50947034.1, CM084267_1_8118654.0, CM084269_1_15799390.1, CM084265_1_71925486.1, CM084271_1_44107457.0, CM084271_1_44090307.0, CM084275_1_120896.1, CM084278_1_20591181.1, CM084272_1_33597692.1, CM084273_1_31863606.1, CM084274_1_4867255.1, CM084268_1_3692649.1, CM084272_1_18194306.0, CM084270_1_972098.0, CM084265_1_64584031.1, CM084265_1_72636291.0",30,"adapter_trim.F1-B6-pH75.bam",-0.26,"adapter_trim.F1-B20-pH75.bam",-0.14,0.4 +"4","adapter_trim.F2-B2-pH75.bam","CM084266_1_57889092.0, CM084272_1_1584317.1, CM084272_1_33617974.0, CM084272_1_43331300.1, CM084273_1_31866838.1, CM084273_1_10381194.0, CM084277_1_29780641.1, CM084279_1_32649961.0, CM084279_1_10147284.1, CM084275_1_38995260.0, CM084274_1_6125560.0, CM084272_1_33515314.1, CM084269_1_1541112.1, CM084279_1_649336.1, CM084265_1_50947034.1, CM084267_1_8118654.0, CM084269_1_15799390.1, CM084265_1_71925486.1, CM084271_1_44107457.0, CM084271_1_44090307.0, CM084275_1_120896.1, CM084278_1_20591181.1, CM084272_1_33597692.1, CM084273_1_31863606.1, CM084274_1_4867255.1, CM084268_1_3692649.1, CM084272_1_18194306.0, CM084270_1_972098.0, CM084265_1_64584031.1, CM084265_1_72636291.0",30,"adapter_trim.F1-B6-pH75.bam",-0.35,"adapter_trim.F1-B1-pH75.bam",-0.58,0.93 +"5","adapter_trim.F2-J29-pH75.bam","CM084279_1_33014997.1, CM084271_1_1034868.0, CM084267_1_2908957.0, CM084276_1_4855640.0, CM084276_1_37353147.0, CM084273_1_31862179.0, CM084266_1_66485296.0, 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CM084265_1_70975032.0, CM084273_1_42287238.0, CM084270_1_32126731.0, CM084264_1_73604407.0, CM084268_1_938570.1, CM084274_1_42473136.1, CM084271_1_3820373.1, CM084271_1_379009.0, CM084264_1_15064482.0, CM084279_1_32652116.1, CM084266_1_64002578.1, CM084267_1_8687446.0, CM084274_1_41835817.0, CM084266_1_66377772.0, CM084272_1_2073148.1, CM084279_1_10157010.0, CM084273_1_31862797.0, CM084275_1_25388546.0, CM084272_1_11675288.1",30,"adapter_trim.F1-B12-pH75.bam",-0.24,"adapter_trim.F1-B14-pH75.bam",-0.42,0.66 +"17","adapter_trim.F2-J25-pH75.bam","CM084265_1_58530104.1, CM084274_1_4708223.0, CM084275_1_8878532.1, CM084268_1_50225025.1, CM084274_1_4709089.1, CM084269_1_40451676.0, CM084266_1_65576820.0, CM084278_1_34806817.0, CM084275_1_524618.0, CM084274_1_4715467.0, CM084270_1_15641821.0, CM084265_1_70975032.0, CM084273_1_42287238.0, CM084270_1_32126731.0, CM084264_1_73604407.0, CM084268_1_938570.1, CM084274_1_42473136.1, CM084271_1_3820373.1, CM084271_1_379009.0, CM084264_1_15064482.0, CM084279_1_32652116.1, CM084266_1_64002578.1, CM084267_1_8687446.0, CM084274_1_41835817.0, CM084266_1_66377772.0, CM084272_1_2073148.1, CM084279_1_10157010.0, CM084273_1_31862797.0, CM084275_1_25388546.0, CM084272_1_11675288.1",30,"adapter_trim.F1-B11-pH75.bam",-0.3,"adapter_trim.F1-B4-pH75.bam",0.02,0.32 +"18","adapter_trim.F2-J62-pH75.bam","CM084265_1_58530104.1, CM084274_1_4708223.0, CM084275_1_8878532.1, CM084268_1_50225025.1, CM084274_1_4709089.1, CM084269_1_40451676.0, CM084266_1_65576820.0, CM084278_1_34806817.0, CM084275_1_524618.0, CM084274_1_4715467.0, CM084270_1_15641821.0, CM084265_1_70975032.0, CM084273_1_42287238.0, CM084270_1_32126731.0, CM084264_1_73604407.0, CM084268_1_938570.1, CM084274_1_42473136.1, CM084271_1_3820373.1, CM084271_1_379009.0, CM084264_1_15064482.0, CM084279_1_32652116.1, CM084266_1_64002578.1, CM084267_1_8687446.0, CM084274_1_41835817.0, CM084266_1_66377772.0, CM084272_1_2073148.1, CM084279_1_10157010.0, CM084273_1_31862797.0, CM084275_1_25388546.0, CM084272_1_11675288.1",30,"adapter_trim.F1-B21-pH75.bam",-0.07,"adapter_trim.F1-B9-pH75.bam",-0.62,0.69 +"19","adapter_trim.F2-B14-pH75.bam","CM084265_1_58530104.1, CM084274_1_4708223.0, CM084275_1_8878532.1, CM084268_1_50225025.1, CM084274_1_4709089.1, CM084269_1_40451676.0, CM084266_1_65576820.0, CM084278_1_34806817.0, CM084275_1_524618.0, CM084274_1_4715467.0, CM084270_1_15641821.0, CM084265_1_70975032.0, CM084273_1_42287238.0, CM084270_1_32126731.0, CM084264_1_73604407.0, CM084268_1_938570.1, CM084274_1_42473136.1, CM084271_1_3820373.1, CM084271_1_379009.0, CM084264_1_15064482.0, CM084279_1_32652116.1, CM084266_1_64002578.1, CM084267_1_8687446.0, CM084274_1_41835817.0, CM084266_1_66377772.0, CM084272_1_2073148.1, CM084279_1_10157010.0, CM084273_1_31862797.0, CM084275_1_25388546.0, CM084272_1_11675288.1",30,"adapter_trim.F1-B12-pH75.bam",-0.26,"adapter_trim.F1-B14-pH75.bam",-0.19,0.45 +"20","adapter_trim.F2-J5-pH75.bam","CM084269_1_15799397.1, CM084265_1_64733395.0, CM084269_1_15823954.0, CM084278_1_20732803.0, CM084269_1_15798363.1, CM084277_1_30642880.0, CM084265_1_72178250.0, CM084277_1_5803909.1, CM084276_1_37353202.1, CM084271_1_3819544.0, CM084265_1_64733351.1, CM084264_1_70175551.0, CM084265_1_50947034.0, CM084269_1_15799403.0, CM084269_1_1572335.1, CM084274_1_4695002.1, CM084275_1_39774927.1, CM084265_1_60316158.1, CM084264_1_48147317.1, CM084271_1_19655964.1, CM084266_1_63468218.0, CM084267_1_591197.1, CM084277_1_36521569.0, CM084264_1_73180493.1, CM084264_1_74191538.0, CM084265_1_73060616.0, CM084265_1_71794015.1, CM084267_1_5168546.1, CM084277_1_4876009.0, CM084275_1_660866.1",30,"adapter_trim.F1-B16-pH75.bam",-0.36,"adapter_trim.F1-B14-pH75.bam",-0.13,0.49 +"21","adapter_trim.F2-J64-pH75.bam","CM084269_1_15799397.1, CM084265_1_64733395.0, CM084269_1_15823954.0, CM084278_1_20732803.0, CM084269_1_15798363.1, CM084277_1_30642880.0, CM084265_1_72178250.0, CM084277_1_5803909.1, CM084276_1_37353202.1, CM084271_1_3819544.0, CM084265_1_64733351.1, CM084264_1_70175551.0, CM084265_1_50947034.0, CM084269_1_15799403.0, CM084269_1_1572335.1, CM084274_1_4695002.1, CM084275_1_39774927.1, CM084265_1_60316158.1, CM084264_1_48147317.1, CM084271_1_19655964.1, CM084266_1_63468218.0, CM084267_1_591197.1, CM084277_1_36521569.0, CM084264_1_73180493.1, CM084264_1_74191538.0, CM084265_1_73060616.0, CM084265_1_71794015.1, CM084267_1_5168546.1, CM084277_1_4876009.0, CM084275_1_660866.1",30,"adapter_trim.F1-B17-pH75.bam",-0.35,"adapter_trim.F1-B9-pH75.bam",-0.26,0.61 +"22","adapter_trim.F2-J66-pH75.bam","CM084269_1_15799397.1, CM084265_1_64733395.0, CM084269_1_15823954.0, CM084278_1_20732803.0, CM084269_1_15798363.1, CM084277_1_30642880.0, CM084265_1_72178250.0, CM084277_1_5803909.1, CM084276_1_37353202.1, CM084271_1_3819544.0, CM084265_1_64733351.1, CM084264_1_70175551.0, CM084265_1_50947034.0, CM084269_1_15799403.0, CM084269_1_1572335.1, CM084274_1_4695002.1, CM084275_1_39774927.1, CM084265_1_60316158.1, CM084264_1_48147317.1, CM084271_1_19655964.1, CM084266_1_63468218.0, CM084267_1_591197.1, CM084277_1_36521569.0, CM084264_1_73180493.1, CM084264_1_74191538.0, CM084265_1_73060616.0, CM084265_1_71794015.1, CM084267_1_5168546.1, CM084277_1_4876009.0, CM084275_1_660866.1",30,"adapter_trim.F1-B17-pH75.bam",0.05,"adapter_trim.F1-B14-pH75.bam",-0.08,0.13 +"23","adapter_trim.F2-J31-pH75.bam","CM084268_1_50200456.1, CM084265_1_69230172.1, CM084268_1_18512798.1, CM084273_1_31863792.0, CM084268_1_28845522.1, CM084274_1_4773524.0, CM084267_1_51167077.1, CM084278_1_22657612.1, CM084265_1_71899669.1, CM084275_1_25388546.0, CM084271_1_43851366.0, CM084275_1_39502454.0, CM084264_1_75338719.0, CM084271_1_44104300.1, CM084266_1_23411289.1, CM084279_1_16586120.0, CM084264_1_72011674.0, CM084264_1_65945.1, CM084275_1_327936.0, CM084274_1_4795858.1, CM084274_1_3688102.1, CM084278_1_22657612.1, CM084267_1_2910789.1, CM084266_1_67239927.1, CM084267_1_832141.1, CM084277_1_30168380.1, CM084270_1_39396029.0, 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CM084275_1_524647.0, CM084276_1_1856078.0, CM084269_1_43524676.1, CM084264_1_72118705.1, CM084279_1_32971482.1, CM084276_1_935739.0, CM084267_1_2163720.0, CM084265_1_71925202.1, CM084264_1_8233152.1, CM084266_1_68319456.0, CM084272_1_33571767.0, CM084264_1_74076720.1, CM084268_1_50679469.1, CM084274_1_4863343.0",30,"adapter_trim.F1-B11-pH75.bam",-0.22,"adapter_trim.F1-B20-pH75.bam",-0.23,0.45 +"28","adapter_trim.F2-J30-pH75.bam","CM084275_1_2509950.1, CM084274_1_4773495.0, CM084275_1_328861.1, CM084272_1_33453804.0, CM084279_1_1196447.1, CM084265_1_64581822.1, CM084265_1_73060663.1, CM084269_1_1567498.0, CM084264_1_70174663.0, CM084276_1_935739.0, CM084271_1_44083919.0, CM084278_1_23555170.1, CM084272_1_1894337.1, CM084272_1_1891463.1, CM084276_1_4238176.1, CM084275_1_1304711.0, CM084276_1_6688311.0, CM084268_1_28845439.1, CM084279_1_32644179.0, CM084275_1_39491731.1, CM084265_1_72368298.0, CM084273_1_32683016.0, CM084277_1_18535878.0, CM084272_1_1144109.1, CM084265_1_71925203.0, 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CM084277_1_30168073.0, CM084269_1_15799397.0, CM084276_1_1500490.0, CM084271_1_19655939.1, CM084266_1_64164372.1, CM084264_1_71721959.0, CM084269_1_39736980.0, CM084264_1_39013.1, CM084278_1_20591128.1, CM084266_1_68919241.0, CM084266_1_69089438.1, CM084271_1_44075863.1, CM084271_1_44190417.1, CM084270_1_42348998.1, CM084269_1_42862803.0",30,"adapter_trim.F1-B6-pH75.bam",-0.14,"adapter_trim.F1-B8-pH75.bam",-0.11,0.25 +"33","adapter_trim.F2-J31-pH75.bam","CM084272_1_7002402.0, CM084266_1_65347078.1, CM084269_1_4628748.0, CM084279_1_1073112.0, CM084268_1_49721922.0, CM084279_1_31409239.0, CM084264_1_69303583.1, CM084278_1_22665042.0, CM084264_1_69287125.0, CM084271_1_37240198.0, CM084266_1_68643398.1, CM084271_1_379038.1, CM084265_1_70595159.0, CM084269_1_15823117.1, CM084266_1_65401967.0, CM084277_1_30168073.0, CM084269_1_15799397.0, CM084276_1_1500490.0, CM084271_1_19655939.1, CM084266_1_64164372.1, CM084264_1_71721959.0, CM084269_1_39736980.0, CM084264_1_39013.1, CM084278_1_20591128.1, CM084266_1_68919241.0, CM084266_1_69089438.1, CM084271_1_44075863.1, CM084271_1_44190417.1, CM084270_1_42348998.1, CM084269_1_42862803.0",30,"adapter_trim.F1-B16-pH75.bam",-0.49,"adapter_trim.F1-B14-pH75.bam",0.04,0.53 +"34","adapter_trim.F2-B11-pH75.bam","CM084272_1_7002402.0, CM084266_1_65347078.1, CM084269_1_4628748.0, CM084279_1_1073112.0, CM084268_1_49721922.0, CM084279_1_31409239.0, CM084264_1_69303583.1, CM084278_1_22665042.0, CM084264_1_69287125.0, CM084271_1_37240198.0, CM084266_1_68643398.1, CM084271_1_379038.1, CM084265_1_70595159.0, CM084269_1_15823117.1, CM084266_1_65401967.0, CM084277_1_30168073.0, CM084269_1_15799397.0, CM084276_1_1500490.0, CM084271_1_19655939.1, CM084266_1_64164372.1, CM084264_1_71721959.0, CM084269_1_39736980.0, CM084264_1_39013.1, CM084278_1_20591128.1, CM084266_1_68919241.0, CM084266_1_69089438.1, CM084271_1_44075863.1, CM084271_1_44190417.1, CM084270_1_42348998.1, CM084269_1_42862803.0",30,"adapter_trim.F1-B6-pH75.bam",-0.54,"adapter_trim.F1-B20-pH75.bam",-0.46,1 +"35","adapter_trim.F2-J26-pH75.bam","CM084275_1_39502454.0, CM084275_1_66811.1, CM084268_1_50216537.0, CM084271_1_43868125.1, CM084279_1_649336.0, CM084265_1_68807625.0, CM084264_1_66439628.1, CM084265_1_68786095.0, CM084265_1_65233014.1, CM084275_1_23083662.1, CM084265_1_68798193.0, CM084266_1_64002578.1, CM084276_1_56048.1, CM084276_1_38271843.1, CM084268_1_50321875.1, CM084269_1_4636883.1, CM084269_1_35627054.0, CM084271_1_256611.1, CM084276_1_38785557.1, CM084268_1_938570.1, CM084269_1_46733079.0, CM084267_1_2426163.0, CM084264_1_70173624.1, CM084278_1_4074392.0, CM084274_1_4864709.0, CM084274_1_4795903.1, CM084270_1_19461856.1, CM084279_1_649298.0, CM084279_1_32662843.0, CM084278_1_22665042.0",30,"adapter_trim.F1-B6-pH75.bam",-0.13,"adapter_trim.F1-B4-pH75.bam",0.1,0.23 +"36","adapter_trim.F2-J5-pH75.bam","CM084275_1_39502454.0, CM084275_1_66811.1, CM084268_1_50216537.0, CM084271_1_43868125.1, CM084279_1_649336.0, CM084265_1_68807625.0, CM084264_1_66439628.1, CM084265_1_68786095.0, CM084265_1_65233014.1, CM084275_1_23083662.1, CM084265_1_68798193.0, CM084266_1_64002578.1, CM084276_1_56048.1, CM084276_1_38271843.1, CM084268_1_50321875.1, CM084269_1_4636883.1, CM084269_1_35627054.0, CM084271_1_256611.1, CM084276_1_38785557.1, CM084268_1_938570.1, CM084269_1_46733079.0, CM084267_1_2426163.0, CM084264_1_70173624.1, CM084278_1_4074392.0, CM084274_1_4864709.0, CM084274_1_4795903.1, CM084270_1_19461856.1, CM084279_1_649298.0, CM084279_1_32662843.0, CM084278_1_22665042.0",30,"adapter_trim.F1-B16-pH75.bam",-0.36,"adapter_trim.F1-B9-pH75.bam",-0.76,1.12 +"37","adapter_trim.F2-J62-pH75.bam","CM084279_1_10151169.1, CM084276_1_4125650.1, CM084265_1_72071366.1, CM084273_1_42287132.0, CM084269_1_4628634.1, CM084278_1_20858390.0, CM084276_1_38072633.0, CM084264_1_75512070.0, CM084264_1_34291216.0, CM084271_1_26325742.0, CM084265_1_64735166.0, CM084279_1_1073112.0, CM084265_1_70979988.1, CM084269_1_1538788.0, CM084279_1_1871842.1, CM084272_1_18194019.0, CM084279_1_1070264.1, CM084266_1_58093839.0, CM084276_1_38970477.1, CM084265_1_72992174.1, CM084265_1_70979994.1, CM084264_1_74989689.1, CM084265_1_73060616.0, CM084277_1_30168102.0, CM084264_1_26773675.0, CM084266_1_38532344.1, CM084278_1_281214.1, CM084264_1_2737868.0, CM084273_1_4090291.0, CM084265_1_71792056.1",30,"adapter_trim.F1-B17-pH75.bam",-0.16,"adapter_trim.F1-B14-pH75.bam",-0.31,0.47 +"38","adapter_trim.F2-J63-pH75.bam","CM084279_1_10151169.1, CM084276_1_4125650.1, CM084265_1_72071366.1, CM084273_1_42287132.0, CM084269_1_4628634.1, CM084278_1_20858390.0, CM084276_1_38072633.0, CM084264_1_75512070.0, CM084264_1_34291216.0, CM084271_1_26325742.0, CM084265_1_64735166.0, CM084279_1_1073112.0, CM084265_1_70979988.1, CM084269_1_1538788.0, CM084279_1_1871842.1, CM084272_1_18194019.0, CM084279_1_1070264.1, CM084266_1_58093839.0, CM084276_1_38970477.1, CM084265_1_72992174.1, CM084265_1_70979994.1, CM084264_1_74989689.1, CM084265_1_73060616.0, CM084277_1_30168102.0, CM084264_1_26773675.0, CM084266_1_38532344.1, CM084278_1_281214.1, CM084264_1_2737868.0, CM084273_1_4090291.0, CM084265_1_71792056.1",30,"adapter_trim.F1-B11-pH75.bam",-0.13,"adapter_trim.F1-B1-pH75.bam",-0.42,0.55 +"39","adapter_trim.F2-B11-pH75.bam","CM084279_1_10151169.1, CM084276_1_4125650.1, CM084265_1_72071366.1, CM084273_1_42287132.0, CM084269_1_4628634.1, CM084278_1_20858390.0, CM084276_1_38072633.0, CM084264_1_75512070.0, CM084264_1_34291216.0, CM084271_1_26325742.0, CM084265_1_64735166.0, CM084279_1_1073112.0, CM084265_1_70979988.1, CM084269_1_1538788.0, CM084279_1_1871842.1, CM084272_1_18194019.0, CM084279_1_1070264.1, CM084266_1_58093839.0, CM084276_1_38970477.1, CM084265_1_72992174.1, CM084265_1_70979994.1, CM084264_1_74989689.1, CM084265_1_73060616.0, CM084277_1_30168102.0, CM084264_1_26773675.0, CM084266_1_38532344.1, CM084278_1_281214.1, CM084264_1_2737868.0, 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CM084275_1_40706380.1, CM084276_1_37987468.0, CM084274_1_34977131.0, CM084264_1_34294652.1, CM084279_1_32644251.1, CM084271_1_7137856.0, CM084274_1_4686932.0, CM084273_1_31865208.0, CM084264_1_73886234.0, CM084265_1_71827811.0, CM084265_1_68714893.0, CM084266_1_70706208.1, CM084265_1_72091635.0, CM084265_1_60219092.0, CM084275_1_25395464.1, CM084272_1_18189795.1",30,"adapter_trim.F1-B6-pH75.bam",-0.11,"adapter_trim.F1-B8-pH75.bam",-0.21,0.32 +"65","adapter_trim.F2-J24-pH75.bam","CM084264_1_66439628.0, CM084274_1_4868380.1, CM084271_1_274110.0, CM084273_1_32683002.0, CM084265_1_66688742.1, CM084266_1_57886823.1, CM084269_1_12905562.0, CM084275_1_675849.0, CM084266_1_70181797.1, CM084268_1_42010.0, CM084269_1_43525214.1, CM084278_1_20625578.0, CM084279_1_10156951.0, CM084266_1_57882606.0, CM084266_1_63466127.1, CM084265_1_64735440.0, CM084270_1_47077465.1, CM084265_1_69381551.1, CM084277_1_36519423.1, CM084267_1_48167440.0, CM084271_1_3818665.1, CM084275_1_1304748.0, CM084276_1_1625257.1, CM084265_1_64196870.0, CM084266_1_69141161.0, CM084264_1_34300493.1, CM084271_1_289999.1, CM084268_1_2832731.0, CM084272_1_36474231.0, CM084278_1_22664889.1",30,"adapter_trim.F1-B16-pH75.bam",-0.36,"adapter_trim.F1-B1-pH75.bam",-0.24,0.6 +"66","adapter_trim.F2-J50-pH75.bam","CM084264_1_66439628.0, CM084274_1_4868380.1, CM084271_1_274110.0, CM084273_1_32683002.0, CM084265_1_66688742.1, CM084266_1_57886823.1, CM084269_1_12905562.0, CM084275_1_675849.0, CM084266_1_70181797.1, CM084268_1_42010.0, CM084269_1_43525214.1, CM084278_1_20625578.0, CM084279_1_10156951.0, CM084266_1_57882606.0, CM084266_1_63466127.1, CM084265_1_64735440.0, CM084270_1_47077465.1, CM084265_1_69381551.1, CM084277_1_36519423.1, CM084267_1_48167440.0, CM084271_1_3818665.1, CM084275_1_1304748.0, CM084276_1_1625257.1, CM084265_1_64196870.0, CM084266_1_69141161.0, CM084264_1_34300493.1, CM084271_1_289999.1, CM084268_1_2832731.0, CM084272_1_36474231.0, CM084278_1_22664889.1",30,"adapter_trim.F1-B6-pH75.bam",-0.43,"adapter_trim.F1-B8-pH75.bam",-0.44,0.87 +"67","adapter_trim.F2-J8-pH75.bam","CM084264_1_66439628.0, CM084274_1_4868380.1, CM084271_1_274110.0, CM084273_1_32683002.0, CM084265_1_66688742.1, CM084266_1_57886823.1, CM084269_1_12905562.0, CM084275_1_675849.0, CM084266_1_70181797.1, CM084268_1_42010.0, CM084269_1_43525214.1, CM084278_1_20625578.0, CM084279_1_10156951.0, CM084266_1_57882606.0, CM084266_1_63466127.1, CM084265_1_64735440.0, CM084270_1_47077465.1, CM084265_1_69381551.1, CM084277_1_36519423.1, CM084267_1_48167440.0, CM084271_1_3818665.1, CM084275_1_1304748.0, CM084276_1_1625257.1, CM084265_1_64196870.0, CM084266_1_69141161.0, CM084264_1_34300493.1, CM084271_1_289999.1, CM084268_1_2832731.0, CM084272_1_36474231.0, CM084278_1_22664889.1",30,"adapter_trim.F1-B11-pH75.bam",-0.47,"adapter_trim.F1-B9-pH75.bam",-0.48,0.95 +"68","adapter_trim.F2-J62-pH75.bam","CM084276_1_37353147.0, CM084278_1_22667307.1, CM084265_1_64585921.1, CM084279_1_1073381.0, CM084277_1_30629891.1, CM084266_1_50301523.1, CM084278_1_20734376.0, CM084266_1_65993526.1, CM084264_1_68634815.1, CM084275_1_25388559.0, CM084271_1_43868201.1, CM084264_1_72117199.1, CM084268_1_3699708.0, CM084279_1_1196447.1, CM084275_1_25395479.0, CM084270_1_47077551.1, CM084274_1_4709650.1, CM084272_1_33453891.0, CM084267_1_51167077.1, CM084264_1_73152512.0, CM084266_1_70400233.1, CM084264_1_74035920.1, CM084265_1_68798193.1, CM084271_1_43816629.1, CM084271_1_30532477.1, CM084278_1_5144637.0, CM084278_1_281214.1, CM084267_1_52593775.0, CM084275_1_312842.0, CM084276_1_12392697.0",30,"adapter_trim.F1-B21-pH75.bam",-0.03,"adapter_trim.F1-B20-pH75.bam",-0.16,0.19 +"69","adapter_trim.F2-B6-pH75.bam","CM084276_1_37353147.0, CM084278_1_22667307.1, CM084265_1_64585921.1, CM084279_1_1073381.0, CM084277_1_30629891.1, CM084266_1_50301523.1, CM084278_1_20734376.0, CM084266_1_65993526.1, CM084264_1_68634815.1, CM084275_1_25388559.0, 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CM084271_1_44086160.0, CM084265_1_66143673.1, CM084264_1_66522465.1, CM084275_1_328861.0, CM084275_1_25395479.0, CM084267_1_8687446.0, CM084265_1_976180.0, CM084269_1_1558052.1, CM084269_1_1567491.1, CM084272_1_33452076.1, CM084275_1_312842.1, CM084265_1_65233017.0, CM084266_1_70706235.0, CM084265_1_71265340.1, CM084267_1_52896264.1, CM084265_1_1816569.1, CM084267_1_8118654.1, CM084269_1_4628634.1, CM084269_1_45438470.0, CM084266_1_68661769.0, CM084269_1_15823106.1, CM084276_1_38960928.1, CM084272_1_18192676.0, CM084265_1_19670958.1, CM084269_1_46693817.1, CM084269_1_4635090.0, CM084266_1_58086157.1, CM084269_1_40338566.0",30,"adapter_trim.F1-B6-pH75.bam",-0.37,"adapter_trim.F1-B8-pH75.bam",-0.16,0.53 +"111","adapter_trim.F2-B2-pH75.bam","CM084272_1_1891434.1, CM084266_1_69625521.0, CM084271_1_44086160.0, CM084265_1_66143673.1, CM084264_1_66522465.1, CM084275_1_328861.0, CM084275_1_25395479.0, CM084267_1_8687446.0, CM084265_1_976180.0, CM084269_1_1558052.1, CM084269_1_1567491.1, CM084272_1_33452076.1, CM084275_1_312842.1, CM084265_1_65233017.0, CM084266_1_70706235.0, CM084265_1_71265340.1, CM084267_1_52896264.1, CM084265_1_1816569.1, CM084267_1_8118654.1, CM084269_1_4628634.1, CM084269_1_45438470.0, CM084266_1_68661769.0, CM084269_1_15823106.1, CM084276_1_38960928.1, CM084272_1_18192676.0, CM084265_1_19670958.1, CM084269_1_46693817.1, CM084269_1_4635090.0, CM084266_1_58086157.1, CM084269_1_40338566.0",30,"adapter_trim.F1-B17-pH75.bam",-0.38,"adapter_trim.F1-B9-pH75.bam",-0.36,0.74 +"112","adapter_trim.F2-J10-pH75.bam","CM084264_1_73604686.1, CM084270_1_19461856.0, CM084276_1_38450614.1, CM084266_1_64726670.1, CM084274_1_4862784.0, CM084274_1_21938486.1, CM084277_1_18545080.0, CM084269_1_1567833.0, CM084272_1_18170755.0, CM084274_1_5028288.1, CM084274_1_4708043.1, CM084278_1_277798.1, CM084267_1_728194.0, CM084271_1_44066688.0, CM084265_1_70609247.1, CM084264_1_72075482.0, CM084264_1_70456947.0, CM084270_1_15641795.1, CM084270_1_4920918.1, CM084271_1_218791.0, CM084267_1_48167440.1, CM084278_1_22645215.1, CM084271_1_43860456.0, CM084267_1_50392699.0, CM084266_1_70181797.1, CM084277_1_30168106.1, CM084277_1_30611563.1, CM084264_1_74191504.0, CM084264_1_69862119.1, CM084278_1_23540735.0",30,"adapter_trim.F1-B6-pH75.bam",-0.2,"adapter_trim.F1-B4-pH75.bam",0.07,0.27 +"113","adapter_trim.F2-J28-pH75.bam","CM084264_1_73604686.1, CM084270_1_19461856.0, CM084276_1_38450614.1, CM084266_1_64726670.1, CM084274_1_4862784.0, CM084274_1_21938486.1, CM084277_1_18545080.0, CM084269_1_1567833.0, CM084272_1_18170755.0, CM084274_1_5028288.1, CM084274_1_4708043.1, CM084278_1_277798.1, CM084267_1_728194.0, CM084271_1_44066688.0, CM084265_1_70609247.1, CM084264_1_72075482.0, CM084264_1_70456947.0, CM084270_1_15641795.1, CM084270_1_4920918.1, CM084271_1_218791.0, CM084267_1_48167440.1, CM084278_1_22645215.1, CM084271_1_43860456.0, CM084267_1_50392699.0, CM084266_1_70181797.1, CM084277_1_30168106.1, CM084277_1_30611563.1, CM084264_1_74191504.0, CM084264_1_69862119.1, CM084278_1_23540735.0",30,"adapter_trim.F1-B6-pH75.bam",-0.04,"adapter_trim.F1-B20-pH75.bam",-0.09,0.13 +"114","adapter_trim.F2-J29-pH75.bam","CM084264_1_73604686.1, CM084270_1_19461856.0, CM084276_1_38450614.1, CM084266_1_64726670.1, CM084274_1_4862784.0, CM084274_1_21938486.1, CM084277_1_18545080.0, CM084269_1_1567833.0, CM084272_1_18170755.0, CM084274_1_5028288.1, CM084274_1_4708043.1, CM084278_1_277798.1, CM084267_1_728194.0, CM084271_1_44066688.0, CM084265_1_70609247.1, CM084264_1_72075482.0, CM084264_1_70456947.0, CM084270_1_15641795.1, CM084270_1_4920918.1, CM084271_1_218791.0, CM084267_1_48167440.1, CM084278_1_22645215.1, CM084271_1_43860456.0, CM084267_1_50392699.0, CM084266_1_70181797.1, CM084277_1_30168106.1, CM084277_1_30611563.1, CM084264_1_74191504.0, CM084264_1_69862119.1, CM084278_1_23540735.0",30,"adapter_trim.F1-B21-pH75.bam",-0.71,"adapter_trim.F1-B14-pH75.bam",0.03,0.74 +"115","adapter_trim.F2-J51-pH75.bam","CM084264_1_73604686.1, CM084270_1_19461856.0, CM084276_1_38450614.1, CM084266_1_64726670.1, CM084274_1_4862784.0, CM084274_1_21938486.1, CM084277_1_18545080.0, CM084269_1_1567833.0, CM084272_1_18170755.0, CM084274_1_5028288.1, CM084274_1_4708043.1, CM084278_1_277798.1, CM084267_1_728194.0, CM084271_1_44066688.0, CM084265_1_70609247.1, CM084264_1_72075482.0, CM084264_1_70456947.0, CM084270_1_15641795.1, CM084270_1_4920918.1, CM084271_1_218791.0, CM084267_1_48167440.1, CM084278_1_22645215.1, CM084271_1_43860456.0, CM084267_1_50392699.0, CM084266_1_70181797.1, CM084277_1_30168106.1, CM084277_1_30611563.1, CM084264_1_74191504.0, CM084264_1_69862119.1, CM084278_1_23540735.0",30,"adapter_trim.F1-B12-pH75.bam",-0.02,"adapter_trim.F1-B8-pH75.bam",-0.29,0.31 +"116","adapter_trim.F2-J62-pH75.bam","CM084264_1_73604686.1, CM084270_1_19461856.0, CM084276_1_38450614.1, CM084266_1_64726670.1, CM084274_1_4862784.0, CM084274_1_21938486.1, CM084277_1_18545080.0, CM084269_1_1567833.0, CM084272_1_18170755.0, CM084274_1_5028288.1, CM084274_1_4708043.1, CM084278_1_277798.1, CM084267_1_728194.0, CM084271_1_44066688.0, CM084265_1_70609247.1, CM084264_1_72075482.0, CM084264_1_70456947.0, CM084270_1_15641795.1, CM084270_1_4920918.1, CM084271_1_218791.0, CM084267_1_48167440.1, CM084278_1_22645215.1, CM084271_1_43860456.0, CM084267_1_50392699.0, CM084266_1_70181797.1, CM084277_1_30168106.1, CM084277_1_30611563.1, CM084264_1_74191504.0, CM084264_1_69862119.1, CM084278_1_23540735.0",30,"adapter_trim.F1-B12-pH75.bam",0,"adapter_trim.F1-B4-pH75.bam",-0.12,0.12 +"117","adapter_trim.F2-J9-pH75.bam","CM084264_1_73604686.1, CM084270_1_19461856.0, CM084276_1_38450614.1, CM084266_1_64726670.1, CM084274_1_4862784.0, CM084274_1_21938486.1, CM084277_1_18545080.0, CM084269_1_1567833.0, CM084272_1_18170755.0, CM084274_1_5028288.1, CM084274_1_4708043.1, CM084278_1_277798.1, CM084267_1_728194.0, CM084271_1_44066688.0, CM084265_1_70609247.1, CM084264_1_72075482.0, CM084264_1_70456947.0, CM084270_1_15641795.1, CM084270_1_4920918.1, CM084271_1_218791.0, CM084267_1_48167440.1, CM084278_1_22645215.1, CM084271_1_43860456.0, CM084267_1_50392699.0, CM084266_1_70181797.1, CM084277_1_30168106.1, CM084277_1_30611563.1, CM084264_1_74191504.0, CM084264_1_69862119.1, CM084278_1_23540735.0",30,"adapter_trim.F1-B6-pH75.bam",-0.04,"adapter_trim.F1-B20-pH75.bam",-0.21,0.25 +"118","adapter_trim.F2-J61-pH75.bam","CM084278_1_5142968.0, CM084276_1_1847190.0, CM084274_1_42855649.1, CM084279_1_1060874.1, CM084274_1_4694578.1, CM084279_1_31409578.1, CM084271_1_43860417.1, CM084264_1_72117194.1, CM084268_1_42024.0, CM084279_1_1196441.0, CM084267_1_1134553.1, CM084269_1_4625304.0, CM084272_1_36474231.0, CM084266_1_58087797.1, CM084266_1_67235326.1, CM084264_1_74266355.0, CM084278_1_8558566.0, CM084268_1_42745.0, CM084264_1_61167140.1, CM084266_1_68919260.0, CM084269_1_46693817.0, CM084264_1_15073604.1, CM084268_1_1326515.1, CM084279_1_31065257.1, CM084266_1_57886153.1, CM084276_1_1847305.1, CM084271_1_340894.1, CM084269_1_39737155.0, CM084265_1_71831401.1, CM084266_1_57884345.0",30,"adapter_trim.F1-B12-pH75.bam",-0.21,"adapter_trim.F1-B4-pH75.bam",0.03,0.24 +"119","adapter_trim.F2-J25-pH75.bam","CM084268_1_28845501.0, CM084272_1_11675265.0, CM084264_1_70175562.0, CM084276_1_2855158.1, CM084269_1_15799403.0, CM084277_1_30027552.1, CM084267_1_2081906.0, CM084276_1_62244.1, CM084278_1_16774412.1, CM084264_1_74076720.0, CM084266_1_64725843.1, CM084268_1_82411.0, CM084271_1_218855.1, CM084264_1_2740163.1, CM084274_1_4730203.1, CM084264_1_66439902.1, CM084275_1_327388.1, CM084274_1_7310951.1, CM084267_1_2163720.0, CM084277_1_29782028.0, CM084274_1_4730089.0, CM084265_1_71820726.0, CM084274_1_4696973.1, CM084276_1_37352348.1, CM084269_1_4635085.1, CM084265_1_71794141.1, CM084266_1_68320526.0, CM084271_1_43860422.0, CM084269_1_45423025.0, CM084278_1_15228710.0",30,"adapter_trim.F1-B16-pH75.bam",-0.36,"adapter_trim.F1-B20-pH75.bam",-0.04,0.4 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CM084276_1_62244.1, CM084278_1_16774412.1, CM084264_1_74076720.0, CM084266_1_64725843.1, CM084268_1_82411.0, CM084271_1_218855.1, CM084264_1_2740163.1, CM084274_1_4730203.1, CM084264_1_66439902.1, CM084275_1_327388.1, CM084274_1_7310951.1, CM084267_1_2163720.0, CM084277_1_29782028.0, CM084274_1_4730089.0, CM084265_1_71820726.0, CM084274_1_4696973.1, CM084276_1_37352348.1, CM084269_1_4635085.1, CM084265_1_71794141.1, CM084266_1_68320526.0, CM084271_1_43860422.0, CM084269_1_45423025.0, CM084278_1_15228710.0",30,"adapter_trim.F1-B6-pH75.bam",-0.24,"adapter_trim.F1-B14-pH75.bam",-0.16,0.4 +"122","adapter_trim.F2-J70-pH75.bam","CM084268_1_28845501.0, CM084272_1_11675265.0, CM084264_1_70175562.0, CM084276_1_2855158.1, CM084269_1_15799403.0, CM084277_1_30027552.1, CM084267_1_2081906.0, CM084276_1_62244.1, CM084278_1_16774412.1, CM084264_1_74076720.0, CM084266_1_64725843.1, CM084268_1_82411.0, CM084271_1_218855.1, CM084264_1_2740163.1, CM084274_1_4730203.1, CM084264_1_66439902.1, CM084275_1_327388.1, CM084274_1_7310951.1, CM084267_1_2163720.0, CM084277_1_29782028.0, CM084274_1_4730089.0, CM084265_1_71820726.0, CM084274_1_4696973.1, CM084276_1_37352348.1, CM084269_1_4635085.1, CM084265_1_71794141.1, CM084266_1_68320526.0, CM084271_1_43860422.0, CM084269_1_45423025.0, CM084278_1_15228710.0",30,"adapter_trim.F1-B17-pH75.bam",-0.32,"adapter_trim.F1-B4-pH75.bam",-0.23,0.55 +"123","adapter_trim.F2-J3-pH75.bam","CM084279_1_10149596.0, CM084275_1_35722060.0, CM084275_1_25397333.0, CM084272_1_1894347.1, CM084271_1_44077319.0, CM084276_1_37144250.0, CM084266_1_58915367.1, CM084269_1_15813150.1, CM084274_1_4694551.0, CM084276_1_1856905.0, CM084269_1_15827759.1, CM084272_1_33453804.0, CM084265_1_46089269.1, CM084274_1_4787926.0, CM084277_1_18546604.0, CM084278_1_20732803.0, CM084271_1_44077305.0, CM084264_1_70188213.0, CM084278_1_8558506.0, CM084264_1_71721959.1, CM084268_1_24031324.0, CM084266_1_68478650.1, CM084267_1_6421422.1, CM084264_1_69902963.1, CM084279_1_160989.1, CM084275_1_25395480.0, CM084264_1_2740287.1, CM084265_1_3130643.0, CM084271_1_19655871.1, CM084268_1_37774069.1",30,"adapter_trim.F1-B16-pH75.bam",-0.08,"adapter_trim.F1-B14-pH75.bam",-0.02,0.1 +"124","adapter_trim.F2-J68-pH75.bam","CM084279_1_10149596.0, CM084275_1_35722060.0, CM084275_1_25397333.0, CM084272_1_1894347.1, CM084271_1_44077319.0, CM084276_1_37144250.0, CM084266_1_58915367.1, CM084269_1_15813150.1, CM084274_1_4694551.0, CM084276_1_1856905.0, CM084269_1_15827759.1, CM084272_1_33453804.0, CM084265_1_46089269.1, CM084274_1_4787926.0, CM084277_1_18546604.0, CM084278_1_20732803.0, CM084271_1_44077305.0, CM084264_1_70188213.0, CM084278_1_8558506.0, CM084264_1_71721959.1, CM084268_1_24031324.0, CM084266_1_68478650.1, CM084267_1_6421422.1, CM084264_1_69902963.1, CM084279_1_160989.1, CM084275_1_25395480.0, CM084264_1_2740287.1, CM084265_1_3130643.0, CM084271_1_19655871.1, CM084268_1_37774069.1",30,"adapter_trim.F1-B12-pH75.bam",-0.06,"adapter_trim.F1-B8-pH75.bam",-0.34,0.4 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CM084279_1_10156950.1, CM084268_1_50216526.0, CM084264_1_69298657.1, CM084266_1_58086155.0, CM084271_1_346606.1, CM084267_1_13261464.1, CM084272_1_1894276.1, CM084268_1_49721842.1, CM084274_1_4792243.1, CM084275_1_38995260.0, CM084275_1_35722051.0, CM084264_1_64487839.0, CM084269_1_1555094.1, CM084266_1_68515581.0, CM084264_1_72117194.0, CM084264_1_70210132.0, CM084271_1_337313.1, CM084269_1_45238238.0, CM084276_1_12383618.1, CM084276_1_38558590.1, CM084265_1_68525973.1, CM084273_1_42285391.0, CM084265_1_72992174.0",30,"adapter_trim.F1-B16-pH75.bam",0.01,"adapter_trim.F1-B14-pH75.bam",-0.05,0.06 +"127","adapter_trim.F2-J66-pH75.bam","CM084270_1_4751873.0, CM084272_1_1596710.1, CM084272_1_43469575.0, CM084264_1_70456944.0, CM084265_1_58530104.1, CM084266_1_59802412.1, CM084274_1_3692509.1, CM084279_1_10156950.1, CM084268_1_50216526.0, CM084264_1_69298657.1, CM084266_1_58086155.0, CM084271_1_346606.1, CM084267_1_13261464.1, CM084272_1_1894276.1, CM084268_1_49721842.1, CM084274_1_4792243.1, CM084275_1_38995260.0, CM084275_1_35722051.0, CM084264_1_64487839.0, CM084269_1_1555094.1, CM084266_1_68515581.0, CM084264_1_72117194.0, CM084264_1_70210132.0, CM084271_1_337313.1, CM084269_1_45238238.0, CM084276_1_12383618.1, CM084276_1_38558590.1, CM084265_1_68525973.1, CM084273_1_42285391.0, CM084265_1_72992174.0",30,"adapter_trim.F1-B12-pH75.bam",0.04,"adapter_trim.F1-B14-pH75.bam",0.01,0.05 +"128","adapter_trim.F2-B21-pH75.bam","CM084270_1_4751873.0, CM084272_1_1596710.1, CM084272_1_43469575.0, CM084264_1_70456944.0, CM084265_1_58530104.1, CM084266_1_59802412.1, CM084274_1_3692509.1, CM084279_1_10156950.1, CM084268_1_50216526.0, CM084264_1_69298657.1, CM084266_1_58086155.0, CM084271_1_346606.1, CM084267_1_13261464.1, CM084272_1_1894276.1, CM084268_1_49721842.1, CM084274_1_4792243.1, CM084275_1_38995260.0, CM084275_1_35722051.0, CM084264_1_64487839.0, CM084269_1_1555094.1, CM084266_1_68515581.0, CM084264_1_72117194.0, CM084264_1_70210132.0, CM084271_1_337313.1, CM084269_1_45238238.0, CM084276_1_12383618.1, CM084276_1_38558590.1, CM084265_1_68525973.1, CM084273_1_42285391.0, CM084265_1_72992174.0",30,"adapter_trim.F1-B16-pH75.bam",-0.29,"adapter_trim.F1-B4-pH75.bam",-0.17,0.46 +"129","adapter_trim.F2-J61-pH75.bam","CM084278_1_22644846.1, CM084278_1_5144630.1, CM084264_1_72054205.1, CM084265_1_70589360.1, CM084264_1_74191574.1, CM084272_1_43480818.1, CM084266_1_68320526.0, CM084264_1_68688356.1, CM084268_1_50202371.1, CM084274_1_4792256.0, CM084266_1_69806293.0, CM084270_1_8242343.0, CM084265_1_72071381.0, CM084264_1_69275359.1, CM084271_1_3816215.0, CM084276_1_38773525.1, CM084276_1_38552579.1, CM084268_1_1508049.1, CM084275_1_327918.1, CM084274_1_4727318.1, CM084276_1_37355346.0, CM084269_1_1558052.1, CM084265_1_70799357.0, CM084271_1_289999.1, CM084264_1_68685021.1, CM084278_1_5142968.1, CM084265_1_69004202.1, CM084266_1_62468799.0, CM084279_1_10147216.1, CM084272_1_33578227.1",30,"adapter_trim.F1-B16-pH75.bam",-0.24,"adapter_trim.F1-B9-pH75.bam",-0.15,0.39 +"130","adapter_trim.F2-J68-pH75.bam","CM084278_1_22644846.1, CM084278_1_5144630.1, CM084264_1_72054205.1, CM084265_1_70589360.1, CM084264_1_74191574.1, CM084272_1_43480818.1, CM084266_1_68320526.0, CM084264_1_68688356.1, CM084268_1_50202371.1, CM084274_1_4792256.0, CM084266_1_69806293.0, CM084270_1_8242343.0, CM084265_1_72071381.0, CM084264_1_69275359.1, CM084271_1_3816215.0, CM084276_1_38773525.1, CM084276_1_38552579.1, CM084268_1_1508049.1, CM084275_1_327918.1, CM084274_1_4727318.1, CM084276_1_37355346.0, CM084269_1_1558052.1, CM084265_1_70799357.0, CM084271_1_289999.1, CM084264_1_68685021.1, CM084278_1_5142968.1, CM084265_1_69004202.1, CM084266_1_62468799.0, CM084279_1_10147216.1, CM084272_1_33578227.1",30,"adapter_trim.F1-B21-pH75.bam",-0.55,"adapter_trim.F1-B14-pH75.bam",-0.16,0.71 +"131","adapter_trim.F2-J70-pH75.bam","CM084278_1_22644846.1, CM084278_1_5144630.1, CM084264_1_72054205.1, CM084265_1_70589360.1, CM084264_1_74191574.1, CM084272_1_43480818.1, CM084266_1_68320526.0, CM084264_1_68688356.1, CM084268_1_50202371.1, CM084274_1_4792256.0, CM084266_1_69806293.0, CM084270_1_8242343.0, CM084265_1_72071381.0, CM084264_1_69275359.1, CM084271_1_3816215.0, CM084276_1_38773525.1, CM084276_1_38552579.1, CM084268_1_1508049.1, CM084275_1_327918.1, CM084274_1_4727318.1, CM084276_1_37355346.0, CM084269_1_1558052.1, CM084265_1_70799357.0, CM084271_1_289999.1, CM084264_1_68685021.1, CM084278_1_5142968.1, CM084265_1_69004202.1, CM084266_1_62468799.0, CM084279_1_10147216.1, CM084272_1_33578227.1",30,"adapter_trim.F1-B21-pH75.bam",-0.28,"adapter_trim.F1-B14-pH75.bam",0,0.28 +"132","adapter_trim.F2-J9-pH75.bam","CM084278_1_22644846.1, CM084278_1_5144630.1, CM084264_1_72054205.1, CM084265_1_70589360.1, CM084264_1_74191574.1, CM084272_1_43480818.1, CM084266_1_68320526.0, CM084264_1_68688356.1, CM084268_1_50202371.1, CM084274_1_4792256.0, CM084266_1_69806293.0, CM084270_1_8242343.0, CM084265_1_72071381.0, CM084264_1_69275359.1, CM084271_1_3816215.0, CM084276_1_38773525.1, CM084276_1_38552579.1, CM084268_1_1508049.1, CM084275_1_327918.1, CM084274_1_4727318.1, CM084276_1_37355346.0, CM084269_1_1558052.1, CM084265_1_70799357.0, CM084271_1_289999.1, CM084264_1_68685021.1, CM084278_1_5142968.1, CM084265_1_69004202.1, CM084266_1_62468799.0, CM084279_1_10147216.1, CM084272_1_33578227.1",30,"adapter_trim.F1-B6-pH75.bam",-0.57,"adapter_trim.F1-B9-pH75.bam",-0.35,0.92 +"133","adapter_trim.F2-B21-pH75.bam","CM084278_1_22644846.1, CM084278_1_5144630.1, CM084264_1_72054205.1, CM084265_1_70589360.1, CM084264_1_74191574.1, CM084272_1_43480818.1, CM084266_1_68320526.0, CM084264_1_68688356.1, CM084268_1_50202371.1, CM084274_1_4792256.0, CM084266_1_69806293.0, CM084270_1_8242343.0, CM084265_1_72071381.0, CM084264_1_69275359.1, CM084271_1_3816215.0, CM084276_1_38773525.1, CM084276_1_38552579.1, CM084268_1_1508049.1, CM084275_1_327918.1, CM084274_1_4727318.1, CM084276_1_37355346.0, CM084269_1_1558052.1, CM084265_1_70799357.0, CM084271_1_289999.1, CM084264_1_68685021.1, CM084278_1_5142968.1, CM084265_1_69004202.1, CM084266_1_62468799.0, CM084279_1_10147216.1, CM084272_1_33578227.1",30,"adapter_trim.F1-B16-pH75.bam",0.07,"adapter_trim.F1-B1-pH75.bam",-0.08,0.15 +"134","adapter_trim.F2-J26-pH75.bam","CM084269_1_41809360.0, CM084278_1_22645215.1, CM084276_1_37916914.0, CM084264_1_74076720.1, CM084265_1_59221320.0, CM084272_1_33497675.0, CM084265_1_39553345.0, CM084274_1_3692509.0, CM084272_1_27414381.1, CM084277_1_30168380.1, CM084274_1_4695106.0, CM084277_1_29780116.1, CM084275_1_29098881.0, CM084278_1_20732803.1, CM084267_1_51366722.1, CM084271_1_1033926.0, CM084274_1_4727151.1, CM084264_1_70174663.0, CM084269_1_46688892.0, CM084273_1_42287132.0, CM084278_1_23547493.1, CM084271_1_43851333.0, CM084270_1_46587591.1, CM084271_1_3807705.1, CM084274_1_4694230.1, CM084279_1_10156977.1, CM084274_1_4868385.1, CM084266_1_68322194.0, CM084277_1_31027250.0, CM084278_1_20630020.0",30,"adapter_trim.F1-B16-pH75.bam",-0.11,"adapter_trim.F1-B14-pH75.bam",0.06,0.17 +"135","adapter_trim.F2-J43-pH75.bam","CM084269_1_41809360.0, CM084278_1_22645215.1, CM084276_1_37916914.0, CM084264_1_74076720.1, CM084265_1_59221320.0, CM084272_1_33497675.0, CM084265_1_39553345.0, CM084274_1_3692509.0, CM084272_1_27414381.1, CM084277_1_30168380.1, CM084274_1_4695106.0, CM084277_1_29780116.1, CM084275_1_29098881.0, CM084278_1_20732803.1, CM084267_1_51366722.1, CM084271_1_1033926.0, CM084274_1_4727151.1, CM084264_1_70174663.0, CM084269_1_46688892.0, CM084273_1_42287132.0, CM084278_1_23547493.1, CM084271_1_43851333.0, CM084270_1_46587591.1, CM084271_1_3807705.1, CM084274_1_4694230.1, CM084279_1_10156977.1, CM084274_1_4868385.1, CM084266_1_68322194.0, CM084277_1_31027250.0, CM084278_1_20630020.0",30,"adapter_trim.F1-B16-pH75.bam",-0.24,"adapter_trim.F1-B8-pH75.bam",-0.17,0.41 +"136","adapter_trim.F2-J63-pH75.bam","CM084269_1_41809360.0, CM084278_1_22645215.1, CM084276_1_37916914.0, CM084264_1_74076720.1, CM084265_1_59221320.0, CM084272_1_33497675.0, CM084265_1_39553345.0, CM084274_1_3692509.0, CM084272_1_27414381.1, CM084277_1_30168380.1, CM084274_1_4695106.0, CM084277_1_29780116.1, CM084275_1_29098881.0, CM084278_1_20732803.1, CM084267_1_51366722.1, CM084271_1_1033926.0, CM084274_1_4727151.1, CM084264_1_70174663.0, CM084269_1_46688892.0, CM084273_1_42287132.0, CM084278_1_23547493.1, CM084271_1_43851333.0, CM084270_1_46587591.1, CM084271_1_3807705.1, CM084274_1_4694230.1, CM084279_1_10156977.1, CM084274_1_4868385.1, CM084266_1_68322194.0, CM084277_1_31027250.0, CM084278_1_20630020.0",30,"adapter_trim.F1-B16-pH75.bam",-0.04,"adapter_trim.F1-B9-pH75.bam",-0.11,0.15 +"137","adapter_trim.F2-J70-pH75.bam","CM084269_1_41809360.0, CM084278_1_22645215.1, CM084276_1_37916914.0, CM084264_1_74076720.1, CM084265_1_59221320.0, CM084272_1_33497675.0, CM084265_1_39553345.0, CM084274_1_3692509.0, CM084272_1_27414381.1, CM084277_1_30168380.1, CM084274_1_4695106.0, CM084277_1_29780116.1, CM084275_1_29098881.0, CM084278_1_20732803.1, CM084267_1_51366722.1, CM084271_1_1033926.0, CM084274_1_4727151.1, CM084264_1_70174663.0, CM084269_1_46688892.0, CM084273_1_42287132.0, CM084278_1_23547493.1, CM084271_1_43851333.0, CM084270_1_46587591.1, CM084271_1_3807705.1, CM084274_1_4694230.1, CM084279_1_10156977.1, CM084274_1_4868385.1, CM084266_1_68322194.0, CM084277_1_31027250.0, CM084278_1_20630020.0",30,"adapter_trim.F1-B6-pH75.bam",-0.17,"adapter_trim.F1-B4-pH75.bam",-0.01,0.18 +"138","adapter_trim.F2-J25-pH75.bam","CM084271_1_37237146.0, CM084267_1_9176202.0, CM084265_1_1816585.0, CM084268_1_3697521.1, CM084270_1_32126728.1, CM084275_1_25395524.1, CM084271_1_44070313.1, CM084264_1_26777914.1, CM084271_1_30532481.1, CM084265_1_69915221.1, CM084277_1_29208310.1, CM084266_1_65298589.0, CM084278_1_20734376.1, CM084279_1_10150672.0, CM084275_1_4345059.0, CM084274_1_4796079.1, CM084270_1_32126729.1, CM084274_1_4796888.1, CM084268_1_49082756.1, CM084274_1_4695205.1, CM084272_1_33589893.1, CM084264_1_64489814.0, CM084275_1_29098881.0, CM084270_1_8242343.0, CM084264_1_74721251.1, CM084275_1_23095998.1, CM084272_1_18188620.1, CM084278_1_4074311.1, CM084267_1_13261525.1, CM084269_1_12905572.0",30,"adapter_trim.F1-B6-pH75.bam",-0.31,"adapter_trim.F1-B20-pH75.bam",-0.49,0.8 +"139","adapter_trim.F2-J46-pH75.bam","CM084271_1_37237146.0, CM084267_1_9176202.0, CM084265_1_1816585.0, CM084268_1_3697521.1, CM084270_1_32126728.1, CM084275_1_25395524.1, CM084271_1_44070313.1, CM084264_1_26777914.1, CM084271_1_30532481.1, CM084265_1_69915221.1, CM084277_1_29208310.1, CM084266_1_65298589.0, CM084278_1_20734376.1, CM084279_1_10150672.0, CM084275_1_4345059.0, CM084274_1_4796079.1, CM084270_1_32126729.1, CM084274_1_4796888.1, CM084268_1_49082756.1, CM084274_1_4695205.1, CM084272_1_33589893.1, CM084264_1_64489814.0, CM084275_1_29098881.0, CM084270_1_8242343.0, CM084264_1_74721251.1, CM084275_1_23095998.1, CM084272_1_18188620.1, CM084278_1_4074311.1, CM084267_1_13261525.1, CM084269_1_12905572.0",30,"adapter_trim.F1-B17-pH75.bam",-0.43,"adapter_trim.F1-B8-pH75.bam",-0.22,0.65 +"140","adapter_trim.F2-J48-pH75.bam","CM084271_1_37237146.0, CM084267_1_9176202.0, CM084265_1_1816585.0, CM084268_1_3697521.1, CM084270_1_32126728.1, CM084275_1_25395524.1, CM084271_1_44070313.1, CM084264_1_26777914.1, CM084271_1_30532481.1, CM084265_1_69915221.1, CM084277_1_29208310.1, CM084266_1_65298589.0, CM084278_1_20734376.1, CM084279_1_10150672.0, CM084275_1_4345059.0, CM084274_1_4796079.1, CM084270_1_32126729.1, CM084274_1_4796888.1, CM084268_1_49082756.1, CM084274_1_4695205.1, CM084272_1_33589893.1, CM084264_1_64489814.0, CM084275_1_29098881.0, CM084270_1_8242343.0, CM084264_1_74721251.1, CM084275_1_23095998.1, CM084272_1_18188620.1, CM084278_1_4074311.1, CM084267_1_13261525.1, CM084269_1_12905572.0",30,"adapter_trim.F1-B17-pH75.bam",-0.49,"adapter_trim.F1-B8-pH75.bam",-0.19,0.68 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CM084264_1_26777914.1, CM084271_1_30532481.1, CM084265_1_69915221.1, CM084277_1_29208310.1, CM084266_1_65298589.0, CM084278_1_20734376.1, CM084279_1_10150672.0, CM084275_1_4345059.0, CM084274_1_4796079.1, CM084270_1_32126729.1, CM084274_1_4796888.1, CM084268_1_49082756.1, CM084274_1_4695205.1, CM084272_1_33589893.1, CM084264_1_64489814.0, CM084275_1_29098881.0, CM084270_1_8242343.0, CM084264_1_74721251.1, CM084275_1_23095998.1, CM084272_1_18188620.1, CM084278_1_4074311.1, CM084267_1_13261525.1, CM084269_1_12905572.0",30,"adapter_trim.F1-B17-pH75.bam",-0.12,"adapter_trim.F1-B8-pH75.bam",0.02,0.14 +"143","adapter_trim.F2-J12-pH75.bam","CM084272_1_18194972.1, CM084275_1_23095265.0, CM084271_1_379028.0, CM084265_1_68807639.1, CM084264_1_69294926.1, CM084279_1_1196450.0, CM084267_1_51033717.0, CM084272_1_33453618.1, CM084269_1_15827787.1, CM084278_1_20736236.1, CM084271_1_44106803.1, CM084266_1_69085559.0, CM084267_1_30270830.0, CM084265_1_73060810.1, CM084276_1_2841292.1, CM084265_1_64735335.1, CM084279_1_31073068.0, CM084274_1_4795479.1, CM084275_1_39780958.1, CM084268_1_49533758.1, CM084265_1_71925176.1, CM084271_1_379038.0, CM084277_1_10628755.1, CM084274_1_4709677.0, CM084275_1_23095308.1, CM084272_1_18192676.1, CM084265_1_61648596.0, CM084274_1_41688609.0, CM084265_1_72368293.0, CM084273_1_31865682.0",30,"adapter_trim.F1-B17-pH75.bam",-0.51,"adapter_trim.F1-B9-pH75.bam",-0.24,0.75 +"144","adapter_trim.F2-J29-pH75.bam","CM084272_1_18194972.1, CM084275_1_23095265.0, CM084271_1_379028.0, CM084265_1_68807639.1, CM084264_1_69294926.1, CM084279_1_1196450.0, CM084267_1_51033717.0, CM084272_1_33453618.1, CM084269_1_15827787.1, CM084278_1_20736236.1, CM084271_1_44106803.1, CM084266_1_69085559.0, CM084267_1_30270830.0, CM084265_1_73060810.1, CM084276_1_2841292.1, CM084265_1_64735335.1, CM084279_1_31073068.0, CM084274_1_4795479.1, CM084275_1_39780958.1, CM084268_1_49533758.1, CM084265_1_71925176.1, CM084271_1_379038.0, CM084277_1_10628755.1, CM084274_1_4709677.0, CM084275_1_23095308.1, CM084272_1_18192676.1, CM084265_1_61648596.0, CM084274_1_41688609.0, CM084265_1_72368293.0, CM084273_1_31865682.0",30,"adapter_trim.F1-B6-pH75.bam",-0.31,"adapter_trim.F1-B8-pH75.bam",-0.5,0.81 +"145","adapter_trim.F2-J61-pH75.bam","CM084269_1_45420345.0, CM084276_1_38117403.1, CM084265_1_72368204.1, CM084264_1_73291504.1, CM084266_1_64726664.1, CM084276_1_4238176.0, CM084276_1_1856643.0, CM084279_1_1070761.1, CM084275_1_40706380.1, CM084268_1_3699701.1, CM084272_1_1308664.1, CM084264_1_72118697.0, CM084272_1_18194972.1, CM084271_1_274033.1, CM084268_1_28845509.1, CM084274_1_3688102.1, CM084264_1_34300493.1, CM084272_1_33497675.1, CM084264_1_70391024.1, CM084269_1_41823136.1, CM084272_1_33617991.0, CM084266_1_68319474.0, CM084264_1_7131437.1, CM084265_1_50947034.0, CM084265_1_959807.0, CM084266_1_52832550.0, CM084266_1_58087784.1, CM084272_1_2072764.0, CM084264_1_70471577.1, CM084267_1_2165108.0",30,"adapter_trim.F1-B6-pH75.bam",-0.01,"adapter_trim.F1-B1-pH75.bam",-0.3,0.31 +"146","adapter_trim.F2-J9-pH75.bam","CM084269_1_45420345.0, CM084276_1_38117403.1, CM084265_1_72368204.1, CM084264_1_73291504.1, CM084266_1_64726664.1, CM084276_1_4238176.0, CM084276_1_1856643.0, CM084279_1_1070761.1, CM084275_1_40706380.1, CM084268_1_3699701.1, CM084272_1_1308664.1, CM084264_1_72118697.0, CM084272_1_18194972.1, CM084271_1_274033.1, CM084268_1_28845509.1, CM084274_1_3688102.1, CM084264_1_34300493.1, CM084272_1_33497675.1, CM084264_1_70391024.1, CM084269_1_41823136.1, CM084272_1_33617991.0, CM084266_1_68319474.0, CM084264_1_7131437.1, CM084265_1_50947034.0, CM084265_1_959807.0, CM084266_1_52832550.0, CM084266_1_58087784.1, CM084272_1_2072764.0, CM084264_1_70471577.1, CM084267_1_2165108.0",30,"adapter_trim.F1-B17-pH75.bam",-0.13,"adapter_trim.F1-B9-pH75.bam",-0.16,0.29 +"147","adapter_trim.F2-J50-pH75.bam","CM084264_1_34300890.0, CM084270_1_8242350.1, CM084269_1_1558034.1, CM084278_1_20865574.1, CM084274_1_5028288.1, CM084271_1_44073395.0, CM084264_1_73604722.0, CM084269_1_15817354.1, CM084265_1_70979988.1, CM084270_1_4921031.1, CM084270_1_8444572.1, CM084268_1_276460.0, CM084270_1_46589385.0, CM084268_1_298790.0, CM084277_1_29782029.1, CM084269_1_43527808.1, CM084266_1_70706263.0, CM084265_1_70799356.1, CM084268_1_3703420.1, CM084276_1_38558546.0, CM084274_1_4796884.1, CM084266_1_816291.0, CM084264_1_8112672.1, CM084271_1_19655878.0, CM084264_1_39013.1, CM084266_1_64002578.0, CM084266_1_71149025.0, CM084266_1_70531191.0, CM084276_1_38943253.1, CM084271_1_23942504.0",30,"adapter_trim.F1-B21-pH75.bam",0.04,"adapter_trim.F1-B8-pH75.bam",0.08,0.12 +"148","adapter_trim.F2-J62-pH75.bam","CM084264_1_34300890.0, CM084270_1_8242350.1, CM084269_1_1558034.1, CM084278_1_20865574.1, CM084274_1_5028288.1, CM084271_1_44073395.0, CM084264_1_73604722.0, CM084269_1_15817354.1, CM084265_1_70979988.1, CM084270_1_4921031.1, CM084270_1_8444572.1, CM084268_1_276460.0, CM084270_1_46589385.0, CM084268_1_298790.0, CM084277_1_29782029.1, CM084269_1_43527808.1, CM084266_1_70706263.0, CM084265_1_70799356.1, CM084268_1_3703420.1, CM084276_1_38558546.0, CM084274_1_4796884.1, CM084266_1_816291.0, CM084264_1_8112672.1, CM084271_1_19655878.0, CM084264_1_39013.1, CM084266_1_64002578.0, CM084266_1_71149025.0, CM084266_1_70531191.0, CM084276_1_38943253.1, CM084271_1_23942504.0",30,"adapter_trim.F1-B21-pH75.bam",0,"adapter_trim.F1-B8-pH75.bam",0.17,0.17 +"149","adapter_trim.F2-J28-pH75.bam","CM084279_1_10151202.1, CM084265_1_64585921.0, CM084267_1_6420929.0, CM084266_1_64725843.1, CM084271_1_44104310.0, CM084278_1_22645215.0, CM084268_1_1508040.0, CM084276_1_38775920.1, CM084265_1_72636285.1, CM084269_1_43523945.0, CM084279_1_10151202.1, CM084274_1_42294261.0, CM084269_1_15813148.0, CM084275_1_39500153.0, CM084272_1_43331300.1, CM084264_1_65945.0, CM084264_1_2740285.1, CM084279_1_16586112.0, CM084269_1_15828545.0, CM084264_1_69902275.1, CM084274_1_4695205.1, CM084264_1_73886234.1, CM084271_1_44105575.0, CM084265_1_64196884.1, CM084271_1_43860417.1, CM084266_1_63195133.1, CM084270_1_46588167.1, CM084267_1_52896140.1, CM084274_1_4694578.1, CM084279_1_32973101.1",30,"adapter_trim.F1-B12-pH75.bam",-0.03,"adapter_trim.F1-B14-pH75.bam",-0.06,0.09 +"150","adapter_trim.F2-J50-pH75.bam","CM084279_1_10151202.1, CM084265_1_64585921.0, CM084267_1_6420929.0, CM084266_1_64725843.1, CM084271_1_44104310.0, CM084278_1_22645215.0, CM084268_1_1508040.0, CM084276_1_38775920.1, CM084265_1_72636285.1, CM084269_1_43523945.0, CM084279_1_10151202.1, CM084274_1_42294261.0, CM084269_1_15813148.0, CM084275_1_39500153.0, CM084272_1_43331300.1, CM084264_1_65945.0, CM084264_1_2740285.1, CM084279_1_16586112.0, CM084269_1_15828545.0, CM084264_1_69902275.1, CM084274_1_4695205.1, CM084264_1_73886234.1, CM084271_1_44105575.0, CM084265_1_64196884.1, CM084271_1_43860417.1, CM084266_1_63195133.1, CM084270_1_46588167.1, CM084267_1_52896140.1, CM084274_1_4694578.1, CM084279_1_32973101.1",30,"adapter_trim.F1-B17-pH75.bam",-0.36,"adapter_trim.F1-B9-pH75.bam",-0.1,0.46 +"151","adapter_trim.F2-J51-pH75.bam","CM084279_1_10151202.1, CM084265_1_64585921.0, CM084267_1_6420929.0, CM084266_1_64725843.1, CM084271_1_44104310.0, CM084278_1_22645215.0, CM084268_1_1508040.0, CM084276_1_38775920.1, CM084265_1_72636285.1, CM084269_1_43523945.0, CM084279_1_10151202.1, CM084274_1_42294261.0, CM084269_1_15813148.0, CM084275_1_39500153.0, CM084272_1_43331300.1, CM084264_1_65945.0, CM084264_1_2740285.1, CM084279_1_16586112.0, CM084269_1_15828545.0, CM084264_1_69902275.1, CM084274_1_4695205.1, CM084264_1_73886234.1, CM084271_1_44105575.0, CM084265_1_64196884.1, CM084271_1_43860417.1, CM084266_1_63195133.1, CM084270_1_46588167.1, CM084267_1_52896140.1, CM084274_1_4694578.1, CM084279_1_32973101.1",30,"adapter_trim.F1-B21-pH75.bam",-0.25,"adapter_trim.F1-B1-pH75.bam",-0.08,0.33 +"152","adapter_trim.F2-J63-pH75.bam","CM084279_1_10151202.1, CM084265_1_64585921.0, CM084267_1_6420929.0, CM084266_1_64725843.1, CM084271_1_44104310.0, CM084278_1_22645215.0, CM084268_1_1508040.0, CM084276_1_38775920.1, CM084265_1_72636285.1, CM084269_1_43523945.0, CM084279_1_10151202.1, CM084274_1_42294261.0, CM084269_1_15813148.0, CM084275_1_39500153.0, CM084272_1_43331300.1, CM084264_1_65945.0, CM084264_1_2740285.1, CM084279_1_16586112.0, CM084269_1_15828545.0, CM084264_1_69902275.1, CM084274_1_4695205.1, CM084264_1_73886234.1, CM084271_1_44105575.0, CM084265_1_64196884.1, CM084271_1_43860417.1, CM084266_1_63195133.1, CM084270_1_46588167.1, CM084267_1_52896140.1, CM084274_1_4694578.1, CM084279_1_32973101.1",30,"adapter_trim.F1-B6-pH75.bam",-0.21,"adapter_trim.F1-B20-pH75.bam",-0.09,0.3 +"153","adapter_trim.F2-J68-pH75.bam","CM084279_1_10151202.1, CM084265_1_64585921.0, CM084267_1_6420929.0, CM084266_1_64725843.1, CM084271_1_44104310.0, CM084278_1_22645215.0, CM084268_1_1508040.0, CM084276_1_38775920.1, CM084265_1_72636285.1, CM084269_1_43523945.0, CM084279_1_10151202.1, CM084274_1_42294261.0, CM084269_1_15813148.0, CM084275_1_39500153.0, CM084272_1_43331300.1, CM084264_1_65945.0, CM084264_1_2740285.1, CM084279_1_16586112.0, CM084269_1_15828545.0, CM084264_1_69902275.1, CM084274_1_4695205.1, CM084264_1_73886234.1, CM084271_1_44105575.0, CM084265_1_64196884.1, CM084271_1_43860417.1, CM084266_1_63195133.1, CM084270_1_46588167.1, CM084267_1_52896140.1, CM084274_1_4694578.1, CM084279_1_32973101.1",30,"adapter_trim.F1-B16-pH75.bam",-0.3,"adapter_trim.F1-B4-pH75.bam",-0.03,0.33 +"154","adapter_trim.F2-J8-pH75.bam","CM084279_1_10151202.1, CM084265_1_64585921.0, CM084267_1_6420929.0, CM084266_1_64725843.1, CM084271_1_44104310.0, CM084278_1_22645215.0, CM084268_1_1508040.0, CM084276_1_38775920.1, CM084265_1_72636285.1, CM084269_1_43523945.0, CM084279_1_10151202.1, CM084274_1_42294261.0, CM084269_1_15813148.0, CM084275_1_39500153.0, CM084272_1_43331300.1, CM084264_1_65945.0, CM084264_1_2740285.1, CM084279_1_16586112.0, CM084269_1_15828545.0, CM084264_1_69902275.1, CM084274_1_4695205.1, CM084264_1_73886234.1, CM084271_1_44105575.0, CM084265_1_64196884.1, CM084271_1_43860417.1, CM084266_1_63195133.1, CM084270_1_46588167.1, CM084267_1_52896140.1, CM084274_1_4694578.1, CM084279_1_32973101.1",30,"adapter_trim.F1-B17-pH75.bam",-0.42,"adapter_trim.F1-B9-pH75.bam",0.03,0.45 +"155","adapter_trim.F2-J9-pH75.bam","CM084279_1_10151202.1, CM084265_1_64585921.0, CM084267_1_6420929.0, CM084266_1_64725843.1, CM084271_1_44104310.0, CM084278_1_22645215.0, CM084268_1_1508040.0, CM084276_1_38775920.1, CM084265_1_72636285.1, CM084269_1_43523945.0, CM084279_1_10151202.1, CM084274_1_42294261.0, CM084269_1_15813148.0, CM084275_1_39500153.0, CM084272_1_43331300.1, CM084264_1_65945.0, CM084264_1_2740285.1, CM084279_1_16586112.0, CM084269_1_15828545.0, CM084264_1_69902275.1, CM084274_1_4695205.1, CM084264_1_73886234.1, CM084271_1_44105575.0, CM084265_1_64196884.1, CM084271_1_43860417.1, CM084266_1_63195133.1, CM084270_1_46588167.1, CM084267_1_52896140.1, CM084274_1_4694578.1, CM084279_1_32973101.1",30,"adapter_trim.F1-B21-pH75.bam",-0.3,"adapter_trim.F1-B4-pH75.bam",-0.1,0.4 +"156","adapter_trim.F2-B22-pH75.bam","CM084268_1_282153.0, CM084271_1_1052235.0, CM084271_1_3820373.1, CM084266_1_68322200.0, CM084265_1_69381619.0, CM084276_1_20157320.1, CM084272_1_33515302.1, CM084265_1_68806414.1, CM084272_1_33452076.0, CM084274_1_4694494.0, CM084267_1_5165693.0, CM084270_1_39395913.0, CM084266_1_57883008.0, CM084266_1_70743731.1, CM084264_1_34297313.0, CM084277_1_31027256.0, CM084266_1_68322200.1, CM084268_1_49720512.1, CM084268_1_50323439.0, CM084270_1_4921018.1, CM084276_1_38489687.0, CM084270_1_19464668.0, CM084268_1_50219223.0, CM084266_1_23295925.0, CM084266_1_69085566.0, CM084275_1_40706385.1, CM084265_1_64196855.1, CM084266_1_69315499.0, CM084268_1_3691150.0, CM084266_1_66832562.1",30,"adapter_trim.F1-B12-pH75.bam",-0.08,"adapter_trim.F1-B9-pH75.bam",-0.35,0.43 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CM084265_1_46089443.1, CM084276_1_38772810.1, CM084268_1_28845439.0, CM084279_1_1062135.0, CM084266_1_57882817.0, CM084276_1_25809512.0, CM084264_1_61227529.1, CM084275_1_661848.1, CM084271_1_337322.1, CM084274_1_4708834.1, CM084268_1_276378.0, CM084269_1_15812965.1, CM084264_1_68688357.1, CM084277_1_10417489.0",30,"adapter_trim.F1-B6-pH75.bam",-0.66,"adapter_trim.F1-B20-pH75.bam",-0.71,1.37 +"160","adapter_trim.F2-J25-pH75.bam","CM084271_1_337322.0, CM084268_1_49735243.1, CM084264_1_12084160.0, CM084277_1_29780644.0, CM084278_1_281246.0, CM084264_1_26777914.0, CM084264_1_73927104.0, CM084277_1_30953033.1, CM084268_1_50790919.1, CM084275_1_39776636.0, CM084266_1_68661769.1, CM084264_1_34297313.0, CM084266_1_69806294.1, CM084265_1_71265331.1, CM084275_1_19996655.0, CM084266_1_70706208.1, CM084274_1_4812546.1, CM084269_1_46733079.1, CM084266_1_62460055.1, CM084264_1_70171655.1, CM084270_1_12307511.1, CM084270_1_46590815.0, CM084276_1_11709759.0, CM084279_1_10150672.0, 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CM084274_1_4671994.1, CM084266_1_70706235.1, CM084264_1_65422.1, CM084269_1_15798267.1, CM084268_1_28845789.0, CM084271_1_340894.1, CM084274_1_4795062.0, CM084268_1_3702289.1, CM084277_1_29208395.0, CM084266_1_69063996.1, CM084276_1_2855915.0, CM084279_1_31409239.0, CM084266_1_23317745.0, CM084272_1_1883699.1, CM084279_1_31073085.0, CM084265_1_69381534.1, CM084273_1_32683002.1, CM084265_1_70799356.1, CM084277_1_1856957.0, CM084268_1_50216537.0",30,"adapter_trim.F1-B21-pH75.bam",-0.3,"adapter_trim.F1-B9-pH75.bam",-0.59,0.89 +"175","adapter_trim.F2-B3-pH75.bam","CM084268_1_50216526.0, CM084274_1_4708043.1, CM084273_1_42253151.0, CM084269_1_15799397.1, CM084268_1_3691150.0, CM084266_1_50301498.1, CM084265_1_59221322.0, CM084276_1_1856643.0, CM084272_1_18194129.1, CM084271_1_30532519.0, CM084274_1_4671994.1, CM084266_1_70706235.1, CM084264_1_65422.1, CM084269_1_15798267.1, CM084268_1_28845789.0, CM084271_1_340894.1, CM084274_1_4795062.0, CM084268_1_3702289.1, CM084277_1_29208395.0, CM084266_1_69063996.1, CM084276_1_2855915.0, CM084279_1_31409239.0, CM084266_1_23317745.0, CM084272_1_1883699.1, CM084279_1_31073085.0, CM084265_1_69381534.1, CM084273_1_32683002.1, CM084265_1_70799356.1, CM084277_1_1856957.0, CM084268_1_50216537.0",30,"adapter_trim.F1-B17-pH75.bam",-0.07,"adapter_trim.F1-B4-pH75.bam",-0.12,0.19 +"176","adapter_trim.F2-J30-pH75.bam","CM084271_1_256611.1, CM084275_1_23075960.0, CM084277_1_31296172.1, CM084271_1_3820382.0, CM084274_1_4868380.1, CM084268_1_50739258.1, CM084274_1_4796888.0, CM084264_1_34300042.0, CM084265_1_39553345.1, CM084267_1_2135741.0, CM084274_1_42859637.0, CM084278_1_4074395.1, CM084266_1_66383611.0, CM084273_1_32698886.0, CM084270_1_32126729.1, CM084275_1_524594.0, CM084269_1_15823117.0, CM084275_1_2509498.1, CM084276_1_38785504.0, CM084265_1_70974986.1, CM084269_1_15799434.1, CM084265_1_60316158.1, CM084266_1_69793914.0, CM084275_1_1303251.0, CM084266_1_69051064.0, CM084269_1_45438488.0, CM084269_1_1567462.0, CM084268_1_50681648.1, CM084269_1_46688892.1, CM084270_1_972098.0",30,"adapter_trim.F1-B6-pH75.bam",-0.54,"adapter_trim.F1-B4-pH75.bam",-0.39,0.93 +"177","adapter_trim.F2-J26-pH75.bam","CM084268_1_28845522.0, CM084264_1_34301153.0, CM084266_1_69085644.1, CM084269_1_1577711.0, CM084279_1_993504.1, CM084270_1_47103324.0, CM084271_1_290001.1, CM084278_1_23542543.1, CM084273_1_42294202.0, CM084272_1_1308683.0, CM084275_1_675849.1, CM084275_1_524614.0, CM084270_1_46589386.0, CM084272_1_33454573.1, CM084265_1_64528148.1, CM084268_1_49533758.0, CM084267_1_51241061.1, CM084273_1_31865846.1, CM084274_1_4795052.1, CM084265_1_60219092.1, CM084272_1_1894340.0, CM084266_1_68919270.1, CM084275_1_400325.0, CM084279_1_161440.1, CM084271_1_44083010.0, CM084276_1_1625257.1, CM084275_1_39502406.1, CM084278_1_5144752.0, CM084274_1_4773486.0, CM084277_1_1856957.1",30,"adapter_trim.F1-B11-pH75.bam",-0.22,"adapter_trim.F1-B8-pH75.bam",-0.22,0.44 +"178","adapter_trim.F2-J2-pH75.bam","CM084268_1_28845522.0, CM084264_1_34301153.0, CM084266_1_69085644.1, CM084269_1_1577711.0, CM084279_1_993504.1, CM084270_1_47103324.0, CM084271_1_290001.1, CM084278_1_23542543.1, CM084273_1_42294202.0, CM084272_1_1308683.0, CM084275_1_675849.1, CM084275_1_524614.0, CM084270_1_46589386.0, CM084272_1_33454573.1, CM084265_1_64528148.1, CM084268_1_49533758.0, CM084267_1_51241061.1, CM084273_1_31865846.1, CM084274_1_4795052.1, CM084265_1_60219092.1, CM084272_1_1894340.0, CM084266_1_68919270.1, CM084275_1_400325.0, CM084279_1_161440.1, CM084271_1_44083010.0, CM084276_1_1625257.1, CM084275_1_39502406.1, CM084278_1_5144752.0, CM084274_1_4773486.0, CM084277_1_1856957.1",30,"adapter_trim.F1-B11-pH75.bam",0.16,"adapter_trim.F1-B1-pH75.bam",-0.13,0.29 +"179","adapter_trim.F2-J30-pH75.bam","CM084268_1_28845522.0, CM084264_1_34301153.0, CM084266_1_69085644.1, CM084269_1_1577711.0, CM084279_1_993504.1, CM084270_1_47103324.0, CM084271_1_290001.1, CM084278_1_23542543.1, CM084273_1_42294202.0, CM084272_1_1308683.0, CM084275_1_675849.1, CM084275_1_524614.0, CM084270_1_46589386.0, CM084272_1_33454573.1, CM084265_1_64528148.1, CM084268_1_49533758.0, CM084267_1_51241061.1, CM084273_1_31865846.1, CM084274_1_4795052.1, CM084265_1_60219092.1, CM084272_1_1894340.0, CM084266_1_68919270.1, CM084275_1_400325.0, CM084279_1_161440.1, CM084271_1_44083010.0, CM084276_1_1625257.1, CM084275_1_39502406.1, CM084278_1_5144752.0, CM084274_1_4773486.0, CM084277_1_1856957.1",30,"adapter_trim.F1-B21-pH75.bam",-0.39,"adapter_trim.F1-B4-pH75.bam",-0.22,0.61 +"180","adapter_trim.F2-J62-pH75.bam","CM084268_1_28845522.0, CM084264_1_34301153.0, CM084266_1_69085644.1, CM084269_1_1577711.0, CM084279_1_993504.1, CM084270_1_47103324.0, CM084271_1_290001.1, CM084278_1_23542543.1, CM084273_1_42294202.0, CM084272_1_1308683.0, CM084275_1_675849.1, CM084275_1_524614.0, CM084270_1_46589386.0, CM084272_1_33454573.1, CM084265_1_64528148.1, CM084268_1_49533758.0, CM084267_1_51241061.1, CM084273_1_31865846.1, CM084274_1_4795052.1, CM084265_1_60219092.1, CM084272_1_1894340.0, CM084266_1_68919270.1, CM084275_1_400325.0, CM084279_1_161440.1, CM084271_1_44083010.0, CM084276_1_1625257.1, CM084275_1_39502406.1, CM084278_1_5144752.0, CM084274_1_4773486.0, CM084277_1_1856957.1",30,"adapter_trim.F1-B12-pH75.bam",-0.25,"adapter_trim.F1-B8-pH75.bam",0.11,0.36 +"181","adapter_trim.F2-B11-pH75.bam","CM084268_1_28845522.0, CM084264_1_34301153.0, CM084266_1_69085644.1, CM084269_1_1577711.0, CM084279_1_993504.1, CM084270_1_47103324.0, CM084271_1_290001.1, CM084278_1_23542543.1, CM084273_1_42294202.0, CM084272_1_1308683.0, CM084275_1_675849.1, CM084275_1_524614.0, CM084270_1_46589386.0, CM084272_1_33454573.1, CM084265_1_64528148.1, CM084268_1_49533758.0, CM084267_1_51241061.1, CM084273_1_31865846.1, CM084274_1_4795052.1, CM084265_1_60219092.1, CM084272_1_1894340.0, CM084266_1_68919270.1, CM084275_1_400325.0, CM084279_1_161440.1, CM084271_1_44083010.0, CM084276_1_1625257.1, CM084275_1_39502406.1, CM084278_1_5144752.0, CM084274_1_4773486.0, CM084277_1_1856957.1",30,"adapter_trim.F1-B6-pH75.bam",-0.07,"adapter_trim.F1-B1-pH75.bam",-0.2,0.27 +"182","adapter_trim.F2-B3-pH75.bam","CM084268_1_28845522.0, CM084264_1_34301153.0, CM084266_1_69085644.1, CM084269_1_1577711.0, CM084279_1_993504.1, CM084270_1_47103324.0, CM084271_1_290001.1, CM084278_1_23542543.1, CM084273_1_42294202.0, CM084272_1_1308683.0, CM084275_1_675849.1, CM084275_1_524614.0, CM084270_1_46589386.0, CM084272_1_33454573.1, CM084265_1_64528148.1, CM084268_1_49533758.0, CM084267_1_51241061.1, CM084273_1_31865846.1, CM084274_1_4795052.1, CM084265_1_60219092.1, CM084272_1_1894340.0, CM084266_1_68919270.1, CM084275_1_400325.0, CM084279_1_161440.1, CM084271_1_44083010.0, CM084276_1_1625257.1, CM084275_1_39502406.1, CM084278_1_5144752.0, CM084274_1_4773486.0, CM084277_1_1856957.1",30,"adapter_trim.F1-B6-pH75.bam",-0.29,"adapter_trim.F1-B8-pH75.bam",-0.22,0.51 +"183","adapter_trim.F2-J11-pH75.bam","CM084267_1_2910789.0, CM084265_1_71925176.0, CM084278_1_20701768.0, CM084267_1_50392699.0, CM084268_1_49719742.1, CM084272_1_1883699.0, CM084267_1_6420915.0, CM084271_1_3819544.1, CM084264_1_73311149.0, CM084271_1_218791.0, CM084273_1_10381194.0, CM084277_1_30642880.1, CM084274_1_42855649.0, CM084268_1_50224889.1, CM084268_1_47694452.1, CM084264_1_69757037.1, CM084277_1_1868699.0, CM084278_1_20734376.1, CM084274_1_5028297.1, CM084268_1_28845439.1, CM084268_1_50216562.1, CM084265_1_71925176.1, CM084275_1_327443.0, CM084265_1_14403550.1, CM084268_1_4550920.0, CM084274_1_4686932.1, CM084277_1_5804570.1, CM084269_1_1577711.0, CM084267_1_2309126.0, CM084268_1_2713890.1",30,"adapter_trim.F1-B17-pH75.bam",-0.33,"adapter_trim.F1-B9-pH75.bam",-0.5,0.83 +"184","adapter_trim.F2-J28-pH75.bam","CM084267_1_2910789.0, CM084265_1_71925176.0, CM084278_1_20701768.0, CM084267_1_50392699.0, CM084268_1_49719742.1, CM084272_1_1883699.0, CM084267_1_6420915.0, CM084271_1_3819544.1, CM084264_1_73311149.0, CM084271_1_218791.0, CM084273_1_10381194.0, CM084277_1_30642880.1, CM084274_1_42855649.0, CM084268_1_50224889.1, CM084268_1_47694452.1, CM084264_1_69757037.1, CM084277_1_1868699.0, CM084278_1_20734376.1, CM084274_1_5028297.1, CM084268_1_28845439.1, CM084268_1_50216562.1, CM084265_1_71925176.1, CM084275_1_327443.0, CM084265_1_14403550.1, CM084268_1_4550920.0, CM084274_1_4686932.1, CM084277_1_5804570.1, CM084269_1_1577711.0, CM084267_1_2309126.0, CM084268_1_2713890.1",30,"adapter_trim.F1-B17-pH75.bam",-0.19,"adapter_trim.F1-B9-pH75.bam",-0.09,0.28 +"185","adapter_trim.F2-J3-pH75.bam","CM084267_1_2910789.0, CM084265_1_71925176.0, CM084278_1_20701768.0, CM084267_1_50392699.0, CM084268_1_49719742.1, CM084272_1_1883699.0, CM084267_1_6420915.0, CM084271_1_3819544.1, CM084264_1_73311149.0, CM084271_1_218791.0, CM084273_1_10381194.0, CM084277_1_30642880.1, CM084274_1_42855649.0, CM084268_1_50224889.1, CM084268_1_47694452.1, CM084264_1_69757037.1, CM084277_1_1868699.0, CM084278_1_20734376.1, CM084274_1_5028297.1, CM084268_1_28845439.1, CM084268_1_50216562.1, CM084265_1_71925176.1, CM084275_1_327443.0, CM084265_1_14403550.1, CM084268_1_4550920.0, CM084274_1_4686932.1, CM084277_1_5804570.1, CM084269_1_1577711.0, CM084267_1_2309126.0, CM084268_1_2713890.1",30,"adapter_trim.F1-B21-pH75.bam",-0.26,"adapter_trim.F1-B9-pH75.bam",-0.17,0.43 +"186","adapter_trim.F2-J5-pH75.bam","CM084267_1_2910789.0, CM084265_1_71925176.0, CM084278_1_20701768.0, CM084267_1_50392699.0, CM084268_1_49719742.1, CM084272_1_1883699.0, CM084267_1_6420915.0, CM084271_1_3819544.1, CM084264_1_73311149.0, CM084271_1_218791.0, CM084273_1_10381194.0, CM084277_1_30642880.1, CM084274_1_42855649.0, CM084268_1_50224889.1, CM084268_1_47694452.1, CM084264_1_69757037.1, CM084277_1_1868699.0, CM084278_1_20734376.1, CM084274_1_5028297.1, CM084268_1_28845439.1, CM084268_1_50216562.1, CM084265_1_71925176.1, CM084275_1_327443.0, CM084265_1_14403550.1, CM084268_1_4550920.0, CM084274_1_4686932.1, CM084277_1_5804570.1, CM084269_1_1577711.0, CM084267_1_2309126.0, CM084268_1_2713890.1",30,"adapter_trim.F1-B17-pH75.bam",-0.4,"adapter_trim.F1-B4-pH75.bam",-0.11,0.51 +"187","adapter_trim.F2-J6-pH75.bam","CM084267_1_2910789.0, CM084265_1_71925176.0, CM084278_1_20701768.0, CM084267_1_50392699.0, CM084268_1_49719742.1, CM084272_1_1883699.0, CM084267_1_6420915.0, CM084271_1_3819544.1, CM084264_1_73311149.0, CM084271_1_218791.0, CM084273_1_10381194.0, CM084277_1_30642880.1, CM084274_1_42855649.0, CM084268_1_50224889.1, CM084268_1_47694452.1, CM084264_1_69757037.1, CM084277_1_1868699.0, CM084278_1_20734376.1, CM084274_1_5028297.1, CM084268_1_28845439.1, CM084268_1_50216562.1, CM084265_1_71925176.1, CM084275_1_327443.0, CM084265_1_14403550.1, CM084268_1_4550920.0, CM084274_1_4686932.1, CM084277_1_5804570.1, CM084269_1_1577711.0, CM084267_1_2309126.0, CM084268_1_2713890.1",30,"adapter_trim.F1-B17-pH75.bam",-0.05,"adapter_trim.F1-B8-pH75.bam",-0.01,0.06 +"188","adapter_trim.F2-J11-pH75.bam","CM084266_1_71166433.1, CM084269_1_35627230.0, CM084272_1_1891465.0, CM084276_1_38117403.0, CM084269_1_43524375.0, CM084277_1_30168073.0, CM084266_1_66483855.1, CM084272_1_33617991.1, CM084266_1_57888563.0, CM084265_1_794843.1, CM084275_1_8878555.1, CM084264_1_34300372.1, CM084271_1_7136506.0, CM084274_1_4709650.1, CM084276_1_37353183.0, CM084273_1_31862797.1, CM084264_1_75338734.1, CM084276_1_4238124.0, CM084267_1_30269806.0, CM084268_1_50321855.0, CM084278_1_15228710.0, CM084265_1_72368204.1, CM084273_1_32698879.1, CM084269_1_15812958.1, CM084264_1_70471577.0, CM084265_1_65322091.1, CM084277_1_6198938.0, CM084268_1_28845816.0, CM084269_1_12905572.1, CM084269_1_1549393.0",30,"adapter_trim.F1-B21-pH75.bam",-0.01,"adapter_trim.F1-B9-pH75.bam",-0.25,0.26 +"189","adapter_trim.F2-J5-pH75.bam","CM084266_1_71166433.1, CM084269_1_35627230.0, CM084272_1_1891465.0, CM084276_1_38117403.0, CM084269_1_43524375.0, CM084277_1_30168073.0, CM084266_1_66483855.1, CM084272_1_33617991.1, CM084266_1_57888563.0, CM084265_1_794843.1, CM084275_1_8878555.1, CM084264_1_34300372.1, CM084271_1_7136506.0, CM084274_1_4709650.1, CM084276_1_37353183.0, CM084273_1_31862797.1, CM084264_1_75338734.1, CM084276_1_4238124.0, CM084267_1_30269806.0, CM084268_1_50321855.0, CM084278_1_15228710.0, CM084265_1_72368204.1, CM084273_1_32698879.1, CM084269_1_15812958.1, CM084264_1_70471577.0, CM084265_1_65322091.1, CM084277_1_6198938.0, CM084268_1_28845816.0, CM084269_1_12905572.1, CM084269_1_1549393.0",30,"adapter_trim.F1-B6-pH75.bam",-0.26,"adapter_trim.F1-B9-pH75.bam",-0.28,0.54 +"190","adapter_trim.F2-J63-pH75.bam","CM084266_1_71166433.1, CM084269_1_35627230.0, CM084272_1_1891465.0, CM084276_1_38117403.0, CM084269_1_43524375.0, CM084277_1_30168073.0, CM084266_1_66483855.1, CM084272_1_33617991.1, CM084266_1_57888563.0, CM084265_1_794843.1, CM084275_1_8878555.1, CM084264_1_34300372.1, CM084271_1_7136506.0, CM084274_1_4709650.1, CM084276_1_37353183.0, CM084273_1_31862797.1, CM084264_1_75338734.1, CM084276_1_4238124.0, CM084267_1_30269806.0, CM084268_1_50321855.0, CM084278_1_15228710.0, CM084265_1_72368204.1, CM084273_1_32698879.1, CM084269_1_15812958.1, CM084264_1_70471577.0, CM084265_1_65322091.1, CM084277_1_6198938.0, CM084268_1_28845816.0, CM084269_1_12905572.1, CM084269_1_1549393.0",30,"adapter_trim.F1-B6-pH75.bam",-0.16,"adapter_trim.F1-B9-pH75.bam",-0.13,0.29 +"191","adapter_trim.F2-J65-pH75.bam","CM084266_1_71166433.1, CM084269_1_35627230.0, CM084272_1_1891465.0, CM084276_1_38117403.0, CM084269_1_43524375.0, CM084277_1_30168073.0, CM084266_1_66483855.1, CM084272_1_33617991.1, CM084266_1_57888563.0, CM084265_1_794843.1, CM084275_1_8878555.1, CM084264_1_34300372.1, CM084271_1_7136506.0, CM084274_1_4709650.1, CM084276_1_37353183.0, CM084273_1_31862797.1, CM084264_1_75338734.1, CM084276_1_4238124.0, CM084267_1_30269806.0, CM084268_1_50321855.0, CM084278_1_15228710.0, CM084265_1_72368204.1, CM084273_1_32698879.1, CM084269_1_15812958.1, CM084264_1_70471577.0, CM084265_1_65322091.1, CM084277_1_6198938.0, CM084268_1_28845816.0, CM084269_1_12905572.1, CM084269_1_1549393.0",30,"adapter_trim.F1-B11-pH75.bam",-0.23,"adapter_trim.F1-B8-pH75.bam",-0.3,0.53 +"192","adapter_trim.F2-B3-pH75.bam","CM084266_1_71166433.1, CM084269_1_35627230.0, CM084272_1_1891465.0, CM084276_1_38117403.0, CM084269_1_43524375.0, CM084277_1_30168073.0, CM084266_1_66483855.1, CM084272_1_33617991.1, CM084266_1_57888563.0, CM084265_1_794843.1, CM084275_1_8878555.1, CM084264_1_34300372.1, CM084271_1_7136506.0, CM084274_1_4709650.1, CM084276_1_37353183.0, CM084273_1_31862797.1, CM084264_1_75338734.1, CM084276_1_4238124.0, CM084267_1_30269806.0, CM084268_1_50321855.0, CM084278_1_15228710.0, CM084265_1_72368204.1, CM084273_1_32698879.1, CM084269_1_15812958.1, CM084264_1_70471577.0, CM084265_1_65322091.1, CM084277_1_6198938.0, CM084268_1_28845816.0, CM084269_1_12905572.1, CM084269_1_1549393.0",30,"adapter_trim.F1-B11-pH75.bam",-0.29,"adapter_trim.F1-B14-pH75.bam",-0.13,0.42 +"193","adapter_trim.F2-J24-pH75.bam","CM084266_1_57885157.0, CM084278_1_23541053.1, CM084268_1_50323442.1, CM084266_1_68478650.0, CM084276_1_38072633.1, CM084265_1_71925202.0, CM084274_1_4694558.1, CM084276_1_11705154.0, CM084279_1_10151202.0, CM084275_1_38169338.0, CM084269_1_43528677.1, CM084266_1_67239927.0, CM084267_1_52112064.1, CM084265_1_72368299.0, CM084271_1_379052.1, CM084265_1_71265331.1, CM084265_1_73061238.0, CM084264_1_70456944.1, CM084276_1_37352348.0, CM084273_1_31862312.0, CM084277_1_30168073.1, CM084266_1_57889053.0, CM084269_1_1526868.0, CM084267_1_5830233.0, CM084267_1_2135737.1, CM084270_1_8444546.1, CM084269_1_40438751.0, CM084266_1_58087794.0, CM084267_1_2652774.1, CM084272_1_43469486.0",30,"adapter_trim.F1-B17-pH75.bam",-0.47,"adapter_trim.F1-B14-pH75.bam",-0.07,0.54 +"194","adapter_trim.F2-J25-pH75.bam","CM084266_1_57885157.0, CM084278_1_23541053.1, CM084268_1_50323442.1, CM084266_1_68478650.0, CM084276_1_38072633.1, CM084265_1_71925202.0, CM084274_1_4694558.1, CM084276_1_11705154.0, CM084279_1_10151202.0, CM084275_1_38169338.0, CM084269_1_43528677.1, CM084266_1_67239927.0, CM084267_1_52112064.1, CM084265_1_72368299.0, CM084271_1_379052.1, CM084265_1_71265331.1, CM084265_1_73061238.0, CM084264_1_70456944.1, CM084276_1_37352348.0, CM084273_1_31862312.0, CM084277_1_30168073.1, CM084266_1_57889053.0, CM084269_1_1526868.0, CM084267_1_5830233.0, CM084267_1_2135737.1, CM084270_1_8444546.1, CM084269_1_40438751.0, CM084266_1_58087794.0, CM084267_1_2652774.1, CM084272_1_43469486.0",30,"adapter_trim.F1-B11-pH75.bam",0,"adapter_trim.F1-B8-pH75.bam",-0.14,0.14 +"195","adapter_trim.F2-J30-pH75.bam","CM084266_1_57885157.0, CM084278_1_23541053.1, CM084268_1_50323442.1, CM084266_1_68478650.0, CM084276_1_38072633.1, CM084265_1_71925202.0, CM084274_1_4694558.1, CM084276_1_11705154.0, CM084279_1_10151202.0, CM084275_1_38169338.0, CM084269_1_43528677.1, CM084266_1_67239927.0, CM084267_1_52112064.1, CM084265_1_72368299.0, CM084271_1_379052.1, CM084265_1_71265331.1, CM084265_1_73061238.0, CM084264_1_70456944.1, CM084276_1_37352348.0, CM084273_1_31862312.0, CM084277_1_30168073.1, CM084266_1_57889053.0, CM084269_1_1526868.0, CM084267_1_5830233.0, CM084267_1_2135737.1, CM084270_1_8444546.1, CM084269_1_40438751.0, CM084266_1_58087794.0, CM084267_1_2652774.1, CM084272_1_43469486.0",30,"adapter_trim.F1-B16-pH75.bam",-0.54,"adapter_trim.F1-B9-pH75.bam",-0.4,0.94 +"196","adapter_trim.F2-J61-pH75.bam","CM084266_1_57885157.0, CM084278_1_23541053.1, CM084268_1_50323442.1, CM084266_1_68478650.0, CM084276_1_38072633.1, CM084265_1_71925202.0, CM084274_1_4694558.1, CM084276_1_11705154.0, CM084279_1_10151202.0, CM084275_1_38169338.0, CM084269_1_43528677.1, CM084266_1_67239927.0, CM084267_1_52112064.1, CM084265_1_72368299.0, CM084271_1_379052.1, CM084265_1_71265331.1, CM084265_1_73061238.0, CM084264_1_70456944.1, CM084276_1_37352348.0, CM084273_1_31862312.0, CM084277_1_30168073.1, CM084266_1_57889053.0, CM084269_1_1526868.0, CM084267_1_5830233.0, CM084267_1_2135737.1, CM084270_1_8444546.1, CM084269_1_40438751.0, CM084266_1_58087794.0, CM084267_1_2652774.1, CM084272_1_43469486.0",30,"adapter_trim.F1-B6-pH75.bam",0.03,"adapter_trim.F1-B8-pH75.bam",0.18,0.21 +"197","adapter_trim.F2-B10-pH75.bam","CM084266_1_57885157.0, CM084278_1_23541053.1, CM084268_1_50323442.1, CM084266_1_68478650.0, CM084276_1_38072633.1, CM084265_1_71925202.0, CM084274_1_4694558.1, CM084276_1_11705154.0, CM084279_1_10151202.0, CM084275_1_38169338.0, CM084269_1_43528677.1, CM084266_1_67239927.0, CM084267_1_52112064.1, CM084265_1_72368299.0, CM084271_1_379052.1, CM084265_1_71265331.1, CM084265_1_73061238.0, CM084264_1_70456944.1, CM084276_1_37352348.0, CM084273_1_31862312.0, CM084277_1_30168073.1, CM084266_1_57889053.0, CM084269_1_1526868.0, CM084267_1_5830233.0, CM084267_1_2135737.1, CM084270_1_8444546.1, CM084269_1_40438751.0, CM084266_1_58087794.0, CM084267_1_2652774.1, CM084272_1_43469486.0",30,"adapter_trim.F1-B11-pH75.bam",0.22,"adapter_trim.F1-B1-pH75.bam",-0.37,0.59 +"198","adapter_trim.F2-B19-pH75.bam","CM084265_1_72071381.0, CM084264_1_61167131.1, CM084274_1_11694583.0, CM084264_1_66561947.0, CM084272_1_36474160.0, CM084264_1_70355068.1, CM084276_1_2855799.1, CM084273_1_32683023.1, CM084274_1_4795052.1, CM084268_1_50315.0, CM084264_1_70471578.0, CM084271_1_1052214.1, CM084268_1_276460.1, CM084277_1_5803909.1, CM084264_1_2740171.1, CM084274_1_4694230.0, CM084265_1_64196870.0, CM084264_1_72075482.1, CM084268_1_9292527.1, CM084272_1_18574376.1, CM084272_1_36474233.1, CM084271_1_39686056.1, CM084264_1_69294926.1, CM084264_1_65945.1, CM084276_1_38960936.0, CM084277_1_5804551.0, CM084267_1_11257260.0, CM084278_1_8558512.1, CM084271_1_19655964.1, CM084272_1_18553681.1",30,"adapter_trim.F1-B16-pH75.bam",-0.31,"adapter_trim.F1-B14-pH75.bam",-0.35,0.66 +"199","adapter_trim.F2-B14-pH75.bam","CM084269_1_1556132.0, CM084269_1_39737155.1, CM084266_1_70400233.1, CM084271_1_257176.1, CM084276_1_37144250.0, CM084268_1_49720454.0, CM084276_1_1855843.0, CM084268_1_1326519.1, CM084277_1_10628715.1, CM084270_1_46587632.1, CM084264_1_34294402.0, CM084269_1_35627068.0, CM084277_1_10628711.0, CM084277_1_30505537.1, CM084265_1_72078910.0, CM084279_1_32652116.0, CM084279_1_161458.1, CM084264_1_70175500.0, CM084278_1_22645215.1, CM084274_1_4715467.0, CM084273_1_268148.0, CM084270_1_46589386.0, CM084273_1_31865230.0, CM084277_1_10628425.1, CM084275_1_39776496.0, CM084278_1_20736228.1, CM084272_1_23578669.1, CM084266_1_23295949.0, CM084264_1_70355068.0, CM084264_1_73311139.0",30,"adapter_trim.F1-B16-pH75.bam",-0.39,"adapter_trim.F1-B14-pH75.bam",-0.16,0.55 +"200","adapter_trim.F2-J2-pH75.bam","CM084265_1_70594980.0, CM084269_1_41809356.1, CM084266_1_69623581.0, CM084266_1_65576820.0, CM084273_1_42253151.0, CM084264_1_68689028.1, CM084268_1_42008.1, CM084264_1_34294652.0, CM084268_1_1326643.1, CM084270_1_13944196.0, CM084270_1_4921029.0, CM084266_1_69623581.1, CM084264_1_8112672.1, CM084266_1_62460085.1, CM084270_1_32126729.1, CM084264_1_61227544.0, CM084276_1_25809541.0, CM084266_1_69095441.1, CM084270_1_19464668.0, CM084264_1_2740173.1, CM084265_1_73061223.0, CM084276_1_1625257.1, CM084271_1_30532438.1, CM084271_1_44091708.1, CM084275_1_2509950.0, CM084264_1_70188213.0, CM084274_1_4708834.0, CM084269_1_15809957.1, CM084274_1_6125560.1, CM084271_1_379028.1",30,"adapter_trim.F1-B17-pH75.bam",0.32,"adapter_trim.F1-B8-pH75.bam",-0.02,0.34 +"201","adapter_trim.F2-J48-pH75.bam","CM084275_1_328864.1, CM084272_1_33453681.1, CM084275_1_23104495.0, CM084274_1_4867333.0, CM084272_1_33515314.1, CM084274_1_4730089.0, CM084266_1_64164374.1, CM084272_1_33546605.1, CM084278_1_22657588.0, CM084264_1_72054053.0, CM084271_1_43868149.0, CM084279_1_31073068.0, CM084265_1_72368298.0, CM084274_1_4788661.1, CM084269_1_40338578.1, CM084266_1_63468235.0, CM084269_1_43529904.0, CM084274_1_4709671.1, CM084276_1_12392697.0, CM084264_1_68688963.0, CM084265_1_71899680.1, CM084279_1_1062128.0, CM084276_1_59031.0, CM084274_1_4793160.0, CM084278_1_5144637.0, CM084270_1_21846007.0, CM084265_1_69381551.0, CM084274_1_4788646.0, CM084264_1_65418.0, CM084266_1_68960407.0",30,"adapter_trim.F1-B6-pH75.bam",-0.22,"adapter_trim.F1-B9-pH75.bam",-0.29,0.51 +"202","adapter_trim.F2-B17-pH75.bam","CM084275_1_328864.1, CM084272_1_33453681.1, CM084275_1_23104495.0, CM084274_1_4867333.0, CM084272_1_33515314.1, CM084274_1_4730089.0, CM084266_1_64164374.1, CM084272_1_33546605.1, CM084278_1_22657588.0, CM084264_1_72054053.0, CM084271_1_43868149.0, CM084279_1_31073068.0, CM084265_1_72368298.0, CM084274_1_4788661.1, CM084269_1_40338578.1, CM084266_1_63468235.0, CM084269_1_43529904.0, CM084274_1_4709671.1, CM084276_1_12392697.0, CM084264_1_68688963.0, CM084265_1_71899680.1, CM084279_1_1062128.0, CM084276_1_59031.0, CM084274_1_4793160.0, CM084278_1_5144637.0, CM084270_1_21846007.0, CM084265_1_69381551.0, CM084274_1_4788646.0, CM084264_1_65418.0, CM084266_1_68960407.0",30,"adapter_trim.F1-B16-pH75.bam",0.12,"adapter_trim.F1-B4-pH75.bam",0.04,0.16 +"203","adapter_trim.F2-J13-pH75.bam","CM084269_1_43529904.0, CM084279_1_1070313.1, CM084268_1_24030545.1, CM084264_1_70190068.0, CM084266_1_23298342.1, CM084266_1_23321836.1, CM084276_1_38960936.1, CM084266_1_57886153.1, CM084274_1_4861946.1, CM084264_1_72054205.1, CM084264_1_75512070.0, CM084278_1_20591212.1, CM084276_1_4125650.1, CM084274_1_21933150.0, CM084264_1_6956700.0, CM084269_1_46693817.0, CM084270_1_47077465.0, CM084270_1_4921029.0, CM084276_1_37352422.0, CM084267_1_6421475.0, CM084268_1_41971.1, CM084268_1_50681537.1, CM084273_1_31861630.0, CM084277_1_1869733.0, CM084278_1_22667323.0, CM084268_1_42211.0, CM084276_1_2841292.1, CM084271_1_379011.0, CM084264_1_70466179.1, CM084268_1_50693763.0",30,"adapter_trim.F1-B12-pH75.bam",-0.53,"adapter_trim.F1-B1-pH75.bam",-0.79,1.32 +"204","adapter_trim.F2-J29-pH75.bam","CM084269_1_43529904.0, CM084279_1_1070313.1, CM084268_1_24030545.1, CM084264_1_70190068.0, CM084266_1_23298342.1, CM084266_1_23321836.1, CM084276_1_38960936.1, CM084266_1_57886153.1, CM084274_1_4861946.1, CM084264_1_72054205.1, CM084264_1_75512070.0, CM084278_1_20591212.1, CM084276_1_4125650.1, CM084274_1_21933150.0, CM084264_1_6956700.0, CM084269_1_46693817.0, CM084270_1_47077465.0, CM084270_1_4921029.0, CM084276_1_37352422.0, CM084267_1_6421475.0, CM084268_1_41971.1, CM084268_1_50681537.1, CM084273_1_31861630.0, CM084277_1_1869733.0, CM084278_1_22667323.0, CM084268_1_42211.0, CM084276_1_2841292.1, CM084271_1_379011.0, CM084264_1_70466179.1, CM084268_1_50693763.0",30,"adapter_trim.F1-B17-pH75.bam",-0.2,"adapter_trim.F1-B9-pH75.bam",-0.69,0.89 +"205","adapter_trim.F2-B17-pH75.bam","CM084269_1_43529904.0, CM084279_1_1070313.1, CM084268_1_24030545.1, CM084264_1_70190068.0, CM084266_1_23298342.1, CM084266_1_23321836.1, CM084276_1_38960936.1, CM084266_1_57886153.1, CM084274_1_4861946.1, CM084264_1_72054205.1, CM084264_1_75512070.0, CM084278_1_20591212.1, CM084276_1_4125650.1, CM084274_1_21933150.0, CM084264_1_6956700.0, CM084269_1_46693817.0, CM084270_1_47077465.0, CM084270_1_4921029.0, CM084276_1_37352422.0, CM084267_1_6421475.0, CM084268_1_41971.1, CM084268_1_50681537.1, CM084273_1_31861630.0, CM084277_1_1869733.0, CM084278_1_22667323.0, CM084268_1_42211.0, CM084276_1_2841292.1, CM084271_1_379011.0, CM084264_1_70466179.1, CM084268_1_50693763.0",30,"adapter_trim.F1-B12-pH75.bam",-0.55,"adapter_trim.F1-B1-pH75.bam",-0.62,1.17 +"206","adapter_trim.F2-J66-pH75.bam","CM084264_1_69303583.0, CM084268_1_50792945.1, CM084271_1_44104315.0, CM084270_1_4920915.1, CM084266_1_69723117.1, CM084265_1_46089269.0, CM084279_1_1072351.0, CM084279_1_32640576.0, CM084264_1_72118697.1, CM084268_1_23612506.1, CM084270_1_47103324.0, CM084270_1_10495951.1, CM084270_1_46589385.1, CM084265_1_70595157.1, CM084274_1_4695205.0, CM084265_1_71820726.1, CM084265_1_786811.1, CM084267_1_11257220.1, CM084271_1_337313.0, CM084265_1_70801089.0, CM084277_1_31296163.1, CM084269_1_45438499.1, CM084278_1_16767353.0, CM084278_1_14913766.1, CM084272_1_26336261.1, CM084271_1_43860460.1, CM084269_1_43523784.0, CM084269_1_35642171.1, CM084270_1_46589386.0, CM084269_1_40336207.1",30,"adapter_trim.F1-B17-pH75.bam",-0.08,"adapter_trim.F1-B4-pH75.bam",0.03,0.11 +"207","adapter_trim.F2-J70-pH75.bam","CM084264_1_69303583.0, CM084268_1_50792945.1, CM084271_1_44104315.0, CM084270_1_4920915.1, CM084266_1_69723117.1, CM084265_1_46089269.0, CM084279_1_1072351.0, CM084279_1_32640576.0, CM084264_1_72118697.1, CM084268_1_23612506.1, CM084270_1_47103324.0, CM084270_1_10495951.1, CM084270_1_46589385.1, CM084265_1_70595157.1, CM084274_1_4695205.0, CM084265_1_71820726.1, CM084265_1_786811.1, CM084267_1_11257220.1, CM084271_1_337313.0, CM084265_1_70801089.0, CM084277_1_31296163.1, CM084269_1_45438499.1, CM084278_1_16767353.0, CM084278_1_14913766.1, CM084272_1_26336261.1, CM084271_1_43860460.1, CM084269_1_43523784.0, CM084269_1_35642171.1, CM084270_1_46589386.0, CM084269_1_40336207.1",30,"adapter_trim.F1-B17-pH75.bam",-0.27,"adapter_trim.F1-B9-pH75.bam",-0.08,0.35 +"208","adapter_trim.F2-J9-pH75.bam","CM084264_1_69303583.0, CM084268_1_50792945.1, CM084271_1_44104315.0, CM084270_1_4920915.1, CM084266_1_69723117.1, CM084265_1_46089269.0, CM084279_1_1072351.0, CM084279_1_32640576.0, CM084264_1_72118697.1, CM084268_1_23612506.1, CM084270_1_47103324.0, CM084270_1_10495951.1, CM084270_1_46589385.1, CM084265_1_70595157.1, CM084274_1_4695205.0, CM084265_1_71820726.1, CM084265_1_786811.1, CM084267_1_11257220.1, CM084271_1_337313.0, CM084265_1_70801089.0, CM084277_1_31296163.1, CM084269_1_45438499.1, CM084278_1_16767353.0, CM084278_1_14913766.1, CM084272_1_26336261.1, CM084271_1_43860460.1, CM084269_1_43523784.0, CM084269_1_35642171.1, CM084270_1_46589386.0, CM084269_1_40336207.1",30,"adapter_trim.F1-B16-pH75.bam",-0.56,"adapter_trim.F1-B20-pH75.bam",-0.43,0.99 +"209","adapter_trim.F2-B5-pH75.bam","CM084264_1_69303583.0, CM084268_1_50792945.1, CM084271_1_44104315.0, CM084270_1_4920915.1, CM084266_1_69723117.1, CM084265_1_46089269.0, CM084279_1_1072351.0, CM084279_1_32640576.0, CM084264_1_72118697.1, CM084268_1_23612506.1, CM084270_1_47103324.0, CM084270_1_10495951.1, CM084270_1_46589385.1, CM084265_1_70595157.1, CM084274_1_4695205.0, CM084265_1_71820726.1, CM084265_1_786811.1, CM084267_1_11257220.1, CM084271_1_337313.0, CM084265_1_70801089.0, CM084277_1_31296163.1, CM084269_1_45438499.1, CM084278_1_16767353.0, CM084278_1_14913766.1, CM084272_1_26336261.1, CM084271_1_43860460.1, CM084269_1_43523784.0, CM084269_1_35642171.1, CM084270_1_46589386.0, CM084269_1_40336207.1",30,"adapter_trim.F1-B6-pH75.bam",-0.26,"adapter_trim.F1-B14-pH75.bam",-0.19,0.45 +"210","adapter_trim.F2-J26-pH75.bam","CM084274_1_4694522.0, CM084275_1_39338236.1, CM084266_1_70181797.0, CM084267_1_13229742.1, CM084271_1_44104716.1, CM084266_1_69052082.0, CM084277_1_10628425.1, CM084267_1_9175848.1, CM084275_1_36064332.1, CM084266_1_68661534.0, CM084266_1_59802398.0, CM084269_1_1567133.0, CM084276_1_714435.0, CM084277_1_36521583.1, CM084275_1_23095998.1, CM084266_1_65401967.0, CM084265_1_64527991.0, CM084267_1_2309126.1, CM084267_1_5165677.1, CM084265_1_66141859.0, CM084279_1_10156951.0, CM084264_1_6151084.1, CM084274_1_4867255.0, CM084274_1_3691337.0, CM084265_1_60313980.1, CM084267_1_2908982.1, CM084271_1_3819803.1, CM084269_1_40438751.1, CM084272_1_33462360.0, CM084264_1_8098050.1",30,"adapter_trim.F1-B11-pH75.bam",-0.49,"adapter_trim.F1-B14-pH75.bam",-0.2,0.69 +"211","adapter_trim.F2-J29-pH75.bam","CM084274_1_4694522.0, CM084275_1_39338236.1, CM084266_1_70181797.0, CM084267_1_13229742.1, CM084271_1_44104716.1, CM084266_1_69052082.0, CM084277_1_10628425.1, CM084267_1_9175848.1, CM084275_1_36064332.1, CM084266_1_68661534.0, CM084266_1_59802398.0, CM084269_1_1567133.0, CM084276_1_714435.0, CM084277_1_36521583.1, CM084275_1_23095998.1, CM084266_1_65401967.0, CM084265_1_64527991.0, CM084267_1_2309126.1, CM084267_1_5165677.1, CM084265_1_66141859.0, CM084279_1_10156951.0, CM084264_1_6151084.1, CM084274_1_4867255.0, CM084274_1_3691337.0, CM084265_1_60313980.1, CM084267_1_2908982.1, CM084271_1_3819803.1, CM084269_1_40438751.1, CM084272_1_33462360.0, CM084264_1_8098050.1",30,"adapter_trim.F1-B12-pH75.bam",-0.22,"adapter_trim.F1-B8-pH75.bam",-0.38,0.6 +"212","adapter_trim.F2-J65-pH75.bam","CM084274_1_4694522.0, CM084275_1_39338236.1, CM084266_1_70181797.0, CM084267_1_13229742.1, CM084271_1_44104716.1, CM084266_1_69052082.0, CM084277_1_10628425.1, CM084267_1_9175848.1, CM084275_1_36064332.1, CM084266_1_68661534.0, CM084266_1_59802398.0, CM084269_1_1567133.0, CM084276_1_714435.0, CM084277_1_36521583.1, CM084275_1_23095998.1, CM084266_1_65401967.0, CM084265_1_64527991.0, CM084267_1_2309126.1, CM084267_1_5165677.1, CM084265_1_66141859.0, CM084279_1_10156951.0, CM084264_1_6151084.1, CM084274_1_4867255.0, CM084274_1_3691337.0, CM084265_1_60313980.1, CM084267_1_2908982.1, CM084271_1_3819803.1, CM084269_1_40438751.1, CM084272_1_33462360.0, CM084264_1_8098050.1",30,"adapter_trim.F1-B6-pH75.bam",-0.08,"adapter_trim.F1-B20-pH75.bam",0.23,0.31 +"213","adapter_trim.F2-J6-pH75.bam","CM084274_1_4694522.0, CM084275_1_39338236.1, CM084266_1_70181797.0, CM084267_1_13229742.1, CM084271_1_44104716.1, CM084266_1_69052082.0, CM084277_1_10628425.1, CM084267_1_9175848.1, CM084275_1_36064332.1, CM084266_1_68661534.0, CM084266_1_59802398.0, CM084269_1_1567133.0, CM084276_1_714435.0, CM084277_1_36521583.1, CM084275_1_23095998.1, CM084266_1_65401967.0, CM084265_1_64527991.0, CM084267_1_2309126.1, CM084267_1_5165677.1, CM084265_1_66141859.0, CM084279_1_10156951.0, CM084264_1_6151084.1, CM084274_1_4867255.0, CM084274_1_3691337.0, CM084265_1_60313980.1, CM084267_1_2908982.1, CM084271_1_3819803.1, CM084269_1_40438751.1, CM084272_1_33462360.0, CM084264_1_8098050.1",30,"adapter_trim.F1-B6-pH75.bam",0.02,"adapter_trim.F1-B8-pH75.bam",-0.04,0.06 +"214","adapter_trim.F2-B10-pH75.bam","CM084274_1_4694522.0, CM084275_1_39338236.1, CM084266_1_70181797.0, CM084267_1_13229742.1, CM084271_1_44104716.1, CM084266_1_69052082.0, CM084277_1_10628425.1, CM084267_1_9175848.1, CM084275_1_36064332.1, CM084266_1_68661534.0, CM084266_1_59802398.0, CM084269_1_1567133.0, CM084276_1_714435.0, CM084277_1_36521583.1, CM084275_1_23095998.1, CM084266_1_65401967.0, CM084265_1_64527991.0, CM084267_1_2309126.1, CM084267_1_5165677.1, CM084265_1_66141859.0, CM084279_1_10156951.0, CM084264_1_6151084.1, CM084274_1_4867255.0, CM084274_1_3691337.0, CM084265_1_60313980.1, CM084267_1_2908982.1, CM084271_1_3819803.1, CM084269_1_40438751.1, CM084272_1_33462360.0, CM084264_1_8098050.1",30,"adapter_trim.F1-B6-pH75.bam",-0.38,"adapter_trim.F1-B4-pH75.bam",-0.7,1.08 +"215","adapter_trim.F2-J5-pH75.bam","CM084266_1_64725838.0, CM084264_1_34297313.0, CM084265_1_72990731.1, CM084272_1_33462360.1, CM084266_1_69314162.1, CM084272_1_41037487.0, CM084266_1_23296704.1, CM084264_1_66439568.1, CM084268_1_3691704.1, CM084265_1_72636291.0, CM084279_1_1512885.0, CM084267_1_728194.1, CM084264_1_73152605.1, CM084265_1_72368298.1, CM084265_1_791030.1, CM084265_1_72637027.1, CM084264_1_72075476.0, CM084271_1_3814120.0, CM084265_1_71899669.1, CM084275_1_25400810.1, CM084272_1_33454573.1, CM084266_1_68919241.0, CM084272_1_18574376.1, CM084265_1_66689301.0, CM084268_1_22932621.0, CM084270_1_8242350.1, CM084265_1_24901859.1, CM084267_1_728194.0, CM084264_1_34294487.1, CM084267_1_2908130.0",30,"adapter_trim.F1-B12-pH75.bam",-0.19,"adapter_trim.F1-B8-pH75.bam",-0.45,0.64 +"216","adapter_trim.F2-J62-pH75.bam","CM084266_1_64725838.0, CM084264_1_34297313.0, CM084265_1_72990731.1, CM084272_1_33462360.1, CM084266_1_69314162.1, CM084272_1_41037487.0, CM084266_1_23296704.1, CM084264_1_66439568.1, CM084268_1_3691704.1, CM084265_1_72636291.0, CM084279_1_1512885.0, CM084267_1_728194.1, CM084264_1_73152605.1, CM084265_1_72368298.1, CM084265_1_791030.1, CM084265_1_72637027.1, CM084264_1_72075476.0, CM084271_1_3814120.0, CM084265_1_71899669.1, CM084275_1_25400810.1, CM084272_1_33454573.1, CM084266_1_68919241.0, CM084272_1_18574376.1, CM084265_1_66689301.0, CM084268_1_22932621.0, CM084270_1_8242350.1, CM084265_1_24901859.1, CM084267_1_728194.0, CM084264_1_34294487.1, CM084267_1_2908130.0",30,"adapter_trim.F1-B17-pH75.bam",-0.08,"adapter_trim.F1-B4-pH75.bam",-0.02,0.1 +"217","adapter_trim.F2-B6-pH75.bam","CM084266_1_64725838.0, CM084264_1_34297313.0, CM084265_1_72990731.1, CM084272_1_33462360.1, CM084266_1_69314162.1, CM084272_1_41037487.0, CM084266_1_23296704.1, CM084264_1_66439568.1, CM084268_1_3691704.1, CM084265_1_72636291.0, CM084279_1_1512885.0, CM084267_1_728194.1, CM084264_1_73152605.1, CM084265_1_72368298.1, CM084265_1_791030.1, CM084265_1_72637027.1, CM084264_1_72075476.0, CM084271_1_3814120.0, CM084265_1_71899669.1, CM084275_1_25400810.1, CM084272_1_33454573.1, CM084266_1_68919241.0, CM084272_1_18574376.1, CM084265_1_66689301.0, CM084268_1_22932621.0, CM084270_1_8242350.1, CM084265_1_24901859.1, CM084267_1_728194.0, CM084264_1_34294487.1, CM084267_1_2908130.0",30,"adapter_trim.F1-B17-pH75.bam",-0.22,"adapter_trim.F1-B8-pH75.bam",-0.13,0.35 +"218","adapter_trim.F2-J25-pH75.bam","CM084275_1_1304711.0, CM084267_1_2908957.0, CM084266_1_70707608.1, CM084274_1_41835817.1, CM084275_1_667184.0, CM084265_1_68019714.0, CM084276_1_56048.0, CM084275_1_328864.1, CM084266_1_23295949.1, CM084275_1_400325.1, CM084278_1_22644846.0, CM084271_1_3816215.0, CM084264_1_74191574.1, CM084273_1_42255116.0, CM084265_1_70979994.0, CM084268_1_50216537.1, CM084268_1_28845509.0, CM084279_1_31065257.1, CM084268_1_22932621.0, CM084276_1_37352420.0, CM084266_1_57882581.0, CM084277_1_10417524.1, CM084275_1_23095308.0, CM084274_1_4795086.1, CM084264_1_8099092.0, CM084273_1_31861630.1, CM084277_1_18535877.1, CM084271_1_30532477.1, CM084275_1_327930.1, CM084269_1_46858338.1",30,"adapter_trim.F1-B17-pH75.bam",-0.01,"adapter_trim.F1-B4-pH75.bam",0.07,0.08 +"219","adapter_trim.F2-J49-pH75.bam","CM084275_1_1304711.0, CM084267_1_2908957.0, CM084266_1_70707608.1, CM084274_1_41835817.1, CM084275_1_667184.0, CM084265_1_68019714.0, CM084276_1_56048.0, CM084275_1_328864.1, CM084266_1_23295949.1, CM084275_1_400325.1, CM084278_1_22644846.0, CM084271_1_3816215.0, CM084264_1_74191574.1, CM084273_1_42255116.0, CM084265_1_70979994.0, CM084268_1_50216537.1, CM084268_1_28845509.0, CM084279_1_31065257.1, CM084268_1_22932621.0, CM084276_1_37352420.0, CM084266_1_57882581.0, CM084277_1_10417524.1, CM084275_1_23095308.0, CM084274_1_4795086.1, CM084264_1_8099092.0, CM084273_1_31861630.1, CM084277_1_18535877.1, CM084271_1_30532477.1, CM084275_1_327930.1, CM084269_1_46858338.1",30,"adapter_trim.F1-B6-pH75.bam",-0.3,"adapter_trim.F1-B4-pH75.bam",-0.16,0.46 +"220","adapter_trim.F2-J61-pH75.bam","CM084275_1_1304711.0, CM084267_1_2908957.0, CM084266_1_70707608.1, CM084274_1_41835817.1, CM084275_1_667184.0, CM084265_1_68019714.0, CM084276_1_56048.0, CM084275_1_328864.1, CM084266_1_23295949.1, CM084275_1_400325.1, CM084278_1_22644846.0, CM084271_1_3816215.0, CM084264_1_74191574.1, CM084273_1_42255116.0, CM084265_1_70979994.0, CM084268_1_50216537.1, CM084268_1_28845509.0, CM084279_1_31065257.1, CM084268_1_22932621.0, CM084276_1_37352420.0, CM084266_1_57882581.0, CM084277_1_10417524.1, CM084275_1_23095308.0, CM084274_1_4795086.1, CM084264_1_8099092.0, CM084273_1_31861630.1, CM084277_1_18535877.1, CM084271_1_30532477.1, CM084275_1_327930.1, CM084269_1_46858338.1",30,"adapter_trim.F1-B16-pH75.bam",-0.05,"adapter_trim.F1-B9-pH75.bam",0.09,0.14 +"221","adapter_trim.F2-J43-pH75.bam","CM084279_1_10149596.1, CM084279_1_1064676.1, CM084268_1_24030546.0, CM084264_1_73931084.1, CM084266_1_70707515.0, CM084264_1_6956767.0, CM084266_1_69141121.1, CM084265_1_70595159.0, CM084266_1_70707515.1, CM084270_1_42355534.1, CM084270_1_39395894.0, CM084268_1_45613.1, CM084266_1_69095441.1, CM084274_1_4696973.1, CM084273_1_4090291.1, CM084276_1_38558546.0, CM084273_1_31865817.1, CM084274_1_4863965.1, CM084264_1_73349423.1, CM084264_1_68634815.0, CM084270_1_15641821.1, CM084264_1_8112674.0, CM084275_1_39394528.1, CM084271_1_26332994.0, CM084266_1_69141202.0, CM084278_1_23547493.0, CM084271_1_1052235.1, CM084275_1_25393422.1, CM084269_1_43528607.0, CM084266_1_71166448.0",30,"adapter_trim.F1-B17-pH75.bam",-0.18,"adapter_trim.F1-B20-pH75.bam",-0.05,0.23 +"222","adapter_trim.F2-J26-pH75.bam","CM084267_1_50994187.0, CM084272_1_18194192.1, CM084264_1_8112672.1, CM084274_1_4863041.0, CM084267_1_5168533.0, CM084272_1_36474242.1, CM084266_1_70707515.0, CM084277_1_4875899.1, CM084271_1_3819398.1, CM084276_1_38558559.0, CM084277_1_30953045.1, CM084279_1_20158977.1, CM084270_1_4920918.0, CM084265_1_70595159.1, CM084268_1_43541.0, CM084266_1_57882817.1, CM084274_1_4812118.1, CM084269_1_4636883.0, CM084275_1_327911.0, CM084272_1_33503448.1, CM084267_1_48167440.0, CM084265_1_61648709.1, CM084264_1_75338719.0, CM084269_1_43524558.0, CM084266_1_50301523.0, CM084265_1_64196884.0, CM084266_1_69314168.1, CM084274_1_4863903.0, CM084265_1_68073022.0, CM084269_1_15828546.1",30,"adapter_trim.F1-B11-pH75.bam",-0.34,"adapter_trim.F1-B4-pH75.bam",-0.03,0.37 +"223","adapter_trim.F2-J48-pH75.bam","CM084267_1_50994187.0, CM084272_1_18194192.1, CM084264_1_8112672.1, CM084274_1_4863041.0, CM084267_1_5168533.0, CM084272_1_36474242.1, CM084266_1_70707515.0, CM084277_1_4875899.1, CM084271_1_3819398.1, CM084276_1_38558559.0, CM084277_1_30953045.1, CM084279_1_20158977.1, CM084270_1_4920918.0, CM084265_1_70595159.1, CM084268_1_43541.0, CM084266_1_57882817.1, CM084274_1_4812118.1, CM084269_1_4636883.0, CM084275_1_327911.0, CM084272_1_33503448.1, CM084267_1_48167440.0, CM084265_1_61648709.1, CM084264_1_75338719.0, CM084269_1_43524558.0, CM084266_1_50301523.0, CM084265_1_64196884.0, CM084266_1_69314168.1, CM084274_1_4863903.0, CM084265_1_68073022.0, CM084269_1_15828546.1",30,"adapter_trim.F1-B21-pH75.bam",-0.04,"adapter_trim.F1-B9-pH75.bam",-0.23,0.27 +"224","adapter_trim.F2-J62-pH75.bam","CM084267_1_50994187.0, CM084272_1_18194192.1, CM084264_1_8112672.1, CM084274_1_4863041.0, CM084267_1_5168533.0, CM084272_1_36474242.1, CM084266_1_70707515.0, CM084277_1_4875899.1, CM084271_1_3819398.1, CM084276_1_38558559.0, CM084277_1_30953045.1, CM084279_1_20158977.1, CM084270_1_4920918.0, CM084265_1_70595159.1, CM084268_1_43541.0, CM084266_1_57882817.1, CM084274_1_4812118.1, CM084269_1_4636883.0, CM084275_1_327911.0, CM084272_1_33503448.1, CM084267_1_48167440.0, CM084265_1_61648709.1, CM084264_1_75338719.0, CM084269_1_43524558.0, CM084266_1_50301523.0, CM084265_1_64196884.0, CM084266_1_69314168.1, CM084274_1_4863903.0, CM084265_1_68073022.0, CM084269_1_15828546.1",30,"adapter_trim.F1-B12-pH75.bam",-0.1,"adapter_trim.F1-B4-pH75.bam",-0.06,0.16 +"225","adapter_trim.F2-J29-pH75.bam","CM084270_1_2585592.1, CM084278_1_20623588.1, CM084278_1_20630020.0, CM084266_1_70706263.0, CM084271_1_3821267.0, CM084264_1_72075482.1, CM084278_1_5144747.0, CM084265_1_70974986.0, CM084275_1_38995359.1, CM084264_1_73931171.0, CM084279_1_31409578.1, CM084269_1_4628639.1, CM084271_1_290137.0, CM084267_1_5881762.0, CM084276_1_4125650.1, CM084266_1_69051080.0, CM084274_1_4726638.0, CM084279_1_1079183.0, CM084264_1_15064482.0, CM084266_1_66483855.1, CM084269_1_4625304.0, CM084264_1_61227529.1, CM084268_1_28845823.1, CM084271_1_43868181.1, CM084276_1_12399731.0, CM084272_1_44059306.0, CM084271_1_218855.1, CM084270_1_39395914.1, CM084275_1_2509950.0, CM084275_1_529178.0",30,"adapter_trim.F1-B16-pH75.bam",-0.19,"adapter_trim.F1-B14-pH75.bam",-0.62,0.81 +"226","adapter_trim.F2-J31-pH75.bam","CM084270_1_2585592.1, CM084278_1_20623588.1, CM084278_1_20630020.0, CM084266_1_70706263.0, CM084271_1_3821267.0, CM084264_1_72075482.1, CM084278_1_5144747.0, CM084265_1_70974986.0, CM084275_1_38995359.1, CM084264_1_73931171.0, CM084279_1_31409578.1, CM084269_1_4628639.1, CM084271_1_290137.0, CM084267_1_5881762.0, CM084276_1_4125650.1, CM084266_1_69051080.0, CM084274_1_4726638.0, CM084279_1_1079183.0, CM084264_1_15064482.0, CM084266_1_66483855.1, CM084269_1_4625304.0, CM084264_1_61227529.1, CM084268_1_28845823.1, CM084271_1_43868181.1, CM084276_1_12399731.0, CM084272_1_44059306.0, CM084271_1_218855.1, CM084270_1_39395914.1, CM084275_1_2509950.0, CM084275_1_529178.0",30,"adapter_trim.F1-B16-pH75.bam",-0.76,"adapter_trim.F1-B1-pH75.bam",-0.58,1.34 +"227","adapter_trim.F2-J48-pH75.bam","CM084270_1_2585592.1, CM084278_1_20623588.1, CM084278_1_20630020.0, CM084266_1_70706263.0, CM084271_1_3821267.0, CM084264_1_72075482.1, CM084278_1_5144747.0, CM084265_1_70974986.0, CM084275_1_38995359.1, CM084264_1_73931171.0, CM084279_1_31409578.1, CM084269_1_4628639.1, CM084271_1_290137.0, CM084267_1_5881762.0, CM084276_1_4125650.1, CM084266_1_69051080.0, CM084274_1_4726638.0, CM084279_1_1079183.0, CM084264_1_15064482.0, CM084266_1_66483855.1, CM084269_1_4625304.0, CM084264_1_61227529.1, CM084268_1_28845823.1, CM084271_1_43868181.1, CM084276_1_12399731.0, CM084272_1_44059306.0, CM084271_1_218855.1, CM084270_1_39395914.1, CM084275_1_2509950.0, CM084275_1_529178.0",30,"adapter_trim.F1-B11-pH75.bam",-0.59,"adapter_trim.F1-B8-pH75.bam",-0.19,0.78 +"228","adapter_trim.F2-J61-pH75.bam","CM084270_1_2585592.1, CM084278_1_20623588.1, CM084278_1_20630020.0, CM084266_1_70706263.0, CM084271_1_3821267.0, CM084264_1_72075482.1, CM084278_1_5144747.0, CM084265_1_70974986.0, CM084275_1_38995359.1, CM084264_1_73931171.0, CM084279_1_31409578.1, CM084269_1_4628639.1, CM084271_1_290137.0, CM084267_1_5881762.0, CM084276_1_4125650.1, CM084266_1_69051080.0, CM084274_1_4726638.0, CM084279_1_1079183.0, CM084264_1_15064482.0, CM084266_1_66483855.1, CM084269_1_4625304.0, CM084264_1_61227529.1, CM084268_1_28845823.1, CM084271_1_43868181.1, CM084276_1_12399731.0, CM084272_1_44059306.0, CM084271_1_218855.1, CM084270_1_39395914.1, CM084275_1_2509950.0, CM084275_1_529178.0",30,"adapter_trim.F1-B16-pH75.bam",-0.39,"adapter_trim.F1-B1-pH75.bam",-0.3,0.69 +"229","adapter_trim.F2-B5-pH75.bam","CM084270_1_2585592.1, CM084278_1_20623588.1, CM084278_1_20630020.0, CM084266_1_70706263.0, CM084271_1_3821267.0, CM084264_1_72075482.1, CM084278_1_5144747.0, CM084265_1_70974986.0, CM084275_1_38995359.1, CM084264_1_73931171.0, CM084279_1_31409578.1, CM084269_1_4628639.1, CM084271_1_290137.0, CM084267_1_5881762.0, CM084276_1_4125650.1, CM084266_1_69051080.0, CM084274_1_4726638.0, CM084279_1_1079183.0, CM084264_1_15064482.0, CM084266_1_66483855.1, CM084269_1_4625304.0, CM084264_1_61227529.1, CM084268_1_28845823.1, CM084271_1_43868181.1, CM084276_1_12399731.0, CM084272_1_44059306.0, CM084271_1_218855.1, CM084270_1_39395914.1, CM084275_1_2509950.0, CM084275_1_529178.0",30,"adapter_trim.F1-B21-pH75.bam",-0.41,"adapter_trim.F1-B4-pH75.bam",-0.05,0.46 +"230","adapter_trim.F2-J8-pH75.bam","CM084274_1_4863779.0, CM084264_1_73604407.1, CM084275_1_66834.0, CM084271_1_44090307.1, CM084267_1_13229742.0, CM084265_1_72368293.0, CM084265_1_66688742.1, CM084268_1_49082756.0, CM084269_1_1567833.0, CM084276_1_38772805.1, CM084273_1_268148.0, CM084266_1_68322200.1, CM084269_1_46688892.1, CM084271_1_760000.0, CM084274_1_4864007.1, CM084270_1_46588167.0, CM084266_1_67912135.0, CM084267_1_2652515.0, CM084277_1_30168102.0, CM084264_1_73931171.1, CM084270_1_8242350.0, CM084275_1_39776496.1, CM084274_1_4704387.0, CM084265_1_69381619.0, CM084279_1_32665186.1, CM084266_1_57882817.1, CM084264_1_73604722.0, CM084273_1_32683001.0, CM084264_1_74035920.1, CM084265_1_58036330.1",30,"adapter_trim.F1-B11-pH75.bam",-0.2,"adapter_trim.F1-B4-pH75.bam",-0.2,0.4 +"231","adapter_trim.F2-B19-pH75.bam","CM084274_1_4863779.0, CM084264_1_73604407.1, CM084275_1_66834.0, CM084271_1_44090307.1, CM084267_1_13229742.0, CM084265_1_72368293.0, CM084265_1_66688742.1, CM084268_1_49082756.0, CM084269_1_1567833.0, CM084276_1_38772805.1, CM084273_1_268148.0, CM084266_1_68322200.1, CM084269_1_46688892.1, CM084271_1_760000.0, CM084274_1_4864007.1, CM084270_1_46588167.0, CM084266_1_67912135.0, CM084267_1_2652515.0, CM084277_1_30168102.0, CM084264_1_73931171.1, CM084270_1_8242350.0, CM084275_1_39776496.1, CM084274_1_4704387.0, CM084265_1_69381619.0, CM084279_1_32665186.1, CM084266_1_57882817.1, CM084264_1_73604722.0, CM084273_1_32683001.0, CM084264_1_74035920.1, CM084265_1_58036330.1",30,"adapter_trim.F1-B16-pH75.bam",-0.3,"adapter_trim.F1-B9-pH75.bam",-0.26,0.56 +"232","adapter_trim.F2-J64-pH75.bam","CM084279_1_1072330.0, CM084268_1_3691704.1, CM084264_1_70466154.0, CM084277_1_31027256.0, CM084271_1_39686056.1, CM084266_1_63195133.0, CM084274_1_12659015.0, CM084268_1_50321875.1, CM084272_1_11675265.0, CM084267_1_6421227.1, CM084266_1_69806294.0, CM084279_1_32666444.0, CM084276_1_38557410.1, CM084276_1_38773527.0, CM084277_1_30611564.1, CM084279_1_10156950.1, CM084265_1_73061238.0, CM084278_1_16774412.1, CM084264_1_8098035.0, CM084265_1_72992174.1, CM084276_1_25975836.1, CM084266_1_66377772.1, CM084265_1_66141830.1, CM084266_1_69547380.0, CM084276_1_38772810.0, CM084266_1_69052082.0, CM084277_1_29781979.0, CM084264_1_73927178.1, CM084268_1_28851946.0, CM084266_1_61737006.1",30,"adapter_trim.F1-B17-pH75.bam",-0.48,"adapter_trim.F1-B1-pH75.bam",-0.52,1 +"233","adapter_trim.F2-B5-pH75.bam","CM084279_1_1072330.0, CM084268_1_3691704.1, CM084264_1_70466154.0, CM084277_1_31027256.0, CM084271_1_39686056.1, CM084266_1_63195133.0, CM084274_1_12659015.0, CM084268_1_50321875.1, CM084272_1_11675265.0, CM084267_1_6421227.1, CM084266_1_69806294.0, CM084279_1_32666444.0, CM084276_1_38557410.1, CM084276_1_38773527.0, CM084277_1_30611564.1, CM084279_1_10156950.1, CM084265_1_73061238.0, CM084278_1_16774412.1, CM084264_1_8098035.0, CM084265_1_72992174.1, CM084276_1_25975836.1, CM084266_1_66377772.1, CM084265_1_66141830.1, CM084266_1_69547380.0, CM084276_1_38772810.0, CM084266_1_69052082.0, CM084277_1_29781979.0, CM084264_1_73927178.1, CM084268_1_28851946.0, CM084266_1_61737006.1",30,"adapter_trim.F1-B16-pH75.bam",-0.08,"adapter_trim.F1-B8-pH75.bam",-0.45,0.53 +"234","adapter_trim.F2-J11-pH75.bam","CM084278_1_277798.1, CM084266_1_57888742.1, CM084270_1_10495951.0, CM084268_1_50681662.1, CM084268_1_50679469.1, CM084269_1_4635012.1, CM084264_1_70355052.0, CM084268_1_42024.1, CM084265_1_71794444.0, CM084272_1_18194306.0, CM084276_1_1855851.0, CM084265_1_71265301.0, CM084265_1_68868203.0, CM084275_1_42592955.0, CM084269_1_1558052.0, CM084267_1_51000190.0, CM084264_1_65418.1, CM084279_1_32973101.0, CM084268_1_2832731.1, CM084274_1_4792130.1, CM084269_1_1567491.0, CM084269_1_35627054.1, CM084267_1_956424.0, CM084273_1_31862599.1, CM084270_1_46587616.1, CM084265_1_1118730.1, CM084275_1_1218645.1, CM084271_1_44070260.0, CM084266_1_66832562.0, CM084264_1_70471566.1",30,"adapter_trim.F1-B6-pH75.bam",-0.72,"adapter_trim.F1-B14-pH75.bam",-0.47,1.19 +"235","adapter_trim.F2-J8-pH75.bam","CM084278_1_277798.1, CM084266_1_57888742.1, CM084270_1_10495951.0, CM084268_1_50681662.1, CM084268_1_50679469.1, CM084269_1_4635012.1, CM084264_1_70355052.0, CM084268_1_42024.1, CM084265_1_71794444.0, CM084272_1_18194306.0, CM084276_1_1855851.0, CM084265_1_71265301.0, CM084265_1_68868203.0, CM084275_1_42592955.0, CM084269_1_1558052.0, CM084267_1_51000190.0, CM084264_1_65418.1, CM084279_1_32973101.0, CM084268_1_2832731.1, CM084274_1_4792130.1, CM084269_1_1567491.0, CM084269_1_35627054.1, CM084267_1_956424.0, CM084273_1_31862599.1, CM084270_1_46587616.1, CM084265_1_1118730.1, CM084275_1_1218645.1, CM084271_1_44070260.0, CM084266_1_66832562.0, CM084264_1_70471566.1",30,"adapter_trim.F1-B16-pH75.bam",-0.08,"adapter_trim.F1-B4-pH75.bam",0,0.08 +"236","adapter_trim.F2-J43-pH75.bam","CM084270_1_8242343.1, CM084266_1_71149023.0, CM084269_1_43523945.0, CM084268_1_2717677.0, CM084279_1_929045.0, CM084268_1_3703420.1, CM084264_1_73927104.1, CM084268_1_1326648.0, CM084265_1_70609247.0, CM084265_1_64733395.1, CM084264_1_26771529.1, CM084269_1_1558034.0, CM084276_1_20157071.1, CM084278_1_20734513.1, CM084264_1_73926160.0, CM084275_1_23096151.1, CM084274_1_4868366.0, CM084279_1_32640564.1, CM084266_1_70706208.0, CM084274_1_4709636.0, CM084273_1_31862476.0, CM084271_1_44090335.1, CM084264_1_8233152.0, CM084270_1_46588167.0, CM084279_1_31075821.0, CM084265_1_70607188.1, CM084278_1_20734518.1, CM084264_1_69862119.0, CM084276_1_1510348.0, CM084279_1_1882771.1",30,"adapter_trim.F1-B16-pH75.bam",-0.26,"adapter_trim.F1-B4-pH75.bam",-0.29,0.55 +"237","adapter_trim.F2-J46-pH75.bam","CM084270_1_8242343.1, CM084266_1_71149023.0, CM084269_1_43523945.0, CM084268_1_2717677.0, CM084279_1_929045.0, CM084268_1_3703420.1, CM084264_1_73927104.1, CM084268_1_1326648.0, CM084265_1_70609247.0, CM084265_1_64733395.1, CM084264_1_26771529.1, CM084269_1_1558034.0, CM084276_1_20157071.1, CM084278_1_20734513.1, CM084264_1_73926160.0, CM084275_1_23096151.1, CM084274_1_4868366.0, CM084279_1_32640564.1, CM084266_1_70706208.0, CM084274_1_4709636.0, CM084273_1_31862476.0, CM084271_1_44090335.1, CM084264_1_8233152.0, CM084270_1_46588167.0, CM084279_1_31075821.0, CM084265_1_70607188.1, CM084278_1_20734518.1, CM084264_1_69862119.0, CM084276_1_1510348.0, CM084279_1_1882771.1",30,"adapter_trim.F1-B11-pH75.bam",-0.28,"adapter_trim.F1-B14-pH75.bam",-0.26,0.54 +"238","adapter_trim.F2-J25-pH75.bam","CM084279_1_1064861.0, CM084276_1_1856078.1, CM084274_1_7449618.0, CM084271_1_760000.1, CM084267_1_9175515.0, CM084264_1_73931084.0, CM084268_1_24030404.1, CM084264_1_69271984.1, CM084279_1_161074.0, CM084269_1_1526871.0, CM084278_1_22667362.1, CM084268_1_50219223.0, CM084270_1_972098.1, CM084272_1_2928852.0, CM084269_1_40451682.1, CM084266_1_65309860.0, CM084278_1_23542095.1, CM084278_1_20735956.0, CM084275_1_312849.1, CM084270_1_46589386.0, CM084274_1_4795858.0, CM084270_1_42355544.0, CM084276_1_37355346.0, CM084265_1_66143640.1, CM084277_1_1868699.1, CM084274_1_6125439.1, CM084279_1_32915259.0, CM084266_1_57882780.0, CM084266_1_57882847.0, CM084269_1_40447963.1",30,"adapter_trim.F1-B6-pH75.bam",-0.19,"adapter_trim.F1-B20-pH75.bam",-0.02,0.21 +"239","adapter_trim.F2-J49-pH75.bam","CM084272_1_2072764.0, CM084277_1_31222635.0, CM084264_1_73929737.1, CM084268_1_28845439.1, CM084268_1_50682932.1, CM084274_1_5028288.0, CM084276_1_38772835.1, CM084279_1_10159270.0, CM084275_1_25393263.0, CM084272_1_33452045.0, CM084264_1_72117233.0, CM084269_1_47255820.0, CM084278_1_20701768.0, CM084275_1_39500153.0, CM084275_1_25388559.1, CM084278_1_22667331.0, CM084270_1_47077465.1, CM084264_1_66525866.1, CM084265_1_66141850.1, CM084279_1_1196441.1, CM084269_1_1580179.0, CM084266_1_65309860.0, CM084278_1_23539431.0, CM084268_1_50323439.0, CM084275_1_42592938.0, CM084268_1_2713890.1, CM084265_1_69924480.1, CM084279_1_1073112.1, CM084276_1_38775936.1, CM084271_1_44106803.1",30,"adapter_trim.F1-B11-pH75.bam",-0.34,"adapter_trim.F1-B20-pH75.bam",-0.25,0.59 +"240","adapter_trim.F2-B16-pH75.bam","CM084272_1_2072764.0, CM084277_1_31222635.0, CM084264_1_73929737.1, CM084268_1_28845439.1, CM084268_1_50682932.1, CM084274_1_5028288.0, CM084276_1_38772835.1, CM084279_1_10159270.0, CM084275_1_25393263.0, CM084272_1_33452045.0, CM084264_1_72117233.0, CM084269_1_47255820.0, CM084278_1_20701768.0, CM084275_1_39500153.0, CM084275_1_25388559.1, CM084278_1_22667331.0, CM084270_1_47077465.1, CM084264_1_66525866.1, CM084265_1_66141850.1, CM084279_1_1196441.1, CM084269_1_1580179.0, CM084266_1_65309860.0, CM084278_1_23539431.0, CM084268_1_50323439.0, CM084275_1_42592938.0, CM084268_1_2713890.1, CM084265_1_69924480.1, CM084279_1_1073112.1, CM084276_1_38775936.1, CM084271_1_44106803.1",30,"adapter_trim.F1-B16-pH75.bam",-0.06,"adapter_trim.F1-B8-pH75.bam",0.13,0.19 +"241","adapter_trim.F2-J50-pH75.bam","CM084278_1_29698392.0, CM084268_1_28845439.1, CM084265_1_72071414.1, CM084264_1_73926180.0, CM084265_1_71827765.1, CM084275_1_66811.0, CM084276_1_54402.0, CM084276_1_38785504.1, CM084271_1_37237149.0, CM084279_1_10150674.1, CM084274_1_4870202.1, CM084275_1_39780930.0, CM084275_1_1304711.0, CM084278_1_20591128.1, CM084266_1_57888640.0, CM084274_1_4727166.1, CM084270_1_4920935.1, CM084265_1_8362532.1, CM084264_1_70174663.0, CM084277_1_30168106.0, CM084276_1_37353154.0, CM084276_1_38552515.1, CM084264_1_64487839.1, CM084265_1_68869214.1, CM084274_1_11694910.1, CM084266_1_23317745.1, CM084266_1_69051080.0, CM084273_1_31862179.1, CM084267_1_6421491.0, CM084268_1_28845439.1",30,"adapter_trim.F1-B6-pH75.bam",-0.24,"adapter_trim.F1-B9-pH75.bam",-0.72,0.96 +"242","adapter_trim.F2-J66-pH75.bam","CM084278_1_29698392.0, CM084268_1_28845439.1, CM084265_1_72071414.1, CM084264_1_73926180.0, CM084265_1_71827765.1, CM084275_1_66811.0, CM084276_1_54402.0, CM084276_1_38785504.1, CM084271_1_37237149.0, CM084279_1_10150674.1, CM084274_1_4870202.1, CM084275_1_39780930.0, CM084275_1_1304711.0, CM084278_1_20591128.1, CM084266_1_57888640.0, CM084274_1_4727166.1, CM084270_1_4920935.1, CM084265_1_8362532.1, CM084264_1_70174663.0, CM084277_1_30168106.0, CM084276_1_37353154.0, CM084276_1_38552515.1, CM084264_1_64487839.1, CM084265_1_68869214.1, CM084274_1_11694910.1, CM084266_1_23317745.1, CM084266_1_69051080.0, CM084273_1_31862179.1, CM084267_1_6421491.0, CM084268_1_28845439.1",30,"adapter_trim.F1-B6-pH75.bam",0.04,"adapter_trim.F1-B9-pH75.bam",-0.01,0.05 +"243","adapter_trim.F2-J6-pH75.bam","CM084278_1_29698392.0, CM084268_1_28845439.1, CM084265_1_72071414.1, CM084264_1_73926180.0, CM084265_1_71827765.1, CM084275_1_66811.0, CM084276_1_54402.0, CM084276_1_38785504.1, CM084271_1_37237149.0, CM084279_1_10150674.1, CM084274_1_4870202.1, CM084275_1_39780930.0, CM084275_1_1304711.0, CM084278_1_20591128.1, CM084266_1_57888640.0, CM084274_1_4727166.1, CM084270_1_4920935.1, CM084265_1_8362532.1, CM084264_1_70174663.0, CM084277_1_30168106.0, CM084276_1_37353154.0, CM084276_1_38552515.1, CM084264_1_64487839.1, CM084265_1_68869214.1, CM084274_1_11694910.1, CM084266_1_23317745.1, CM084266_1_69051080.0, CM084273_1_31862179.1, CM084267_1_6421491.0, CM084268_1_28845439.1",30,"adapter_trim.F1-B12-pH75.bam",-0.03,"adapter_trim.F1-B9-pH75.bam",-0.02,0.05 +"244","adapter_trim.F2-B21-pH75.bam","CM084278_1_29698392.0, CM084268_1_28845439.1, CM084265_1_72071414.1, CM084264_1_73926180.0, CM084265_1_71827765.1, CM084275_1_66811.0, CM084276_1_54402.0, CM084276_1_38785504.1, CM084271_1_37237149.0, CM084279_1_10150674.1, CM084274_1_4870202.1, CM084275_1_39780930.0, CM084275_1_1304711.0, CM084278_1_20591128.1, CM084266_1_57888640.0, CM084274_1_4727166.1, CM084270_1_4920935.1, CM084265_1_8362532.1, CM084264_1_70174663.0, CM084277_1_30168106.0, CM084276_1_37353154.0, CM084276_1_38552515.1, CM084264_1_64487839.1, CM084265_1_68869214.1, CM084274_1_11694910.1, CM084266_1_23317745.1, CM084266_1_69051080.0, CM084273_1_31862179.1, CM084267_1_6421491.0, CM084268_1_28845439.1",30,"adapter_trim.F1-B12-pH75.bam",-0.34,"adapter_trim.F1-B14-pH75.bam",-0.01,0.35 +"245","adapter_trim.F2-J3-pH75.bam","CM084265_1_46089269.0, CM084268_1_50225017.1, CM084268_1_3699577.1, CM084275_1_19996650.0, CM084266_1_57889035.1, CM084267_1_8118540.1, CM084276_1_38558546.1, CM084267_1_5881751.0, CM084266_1_57882573.0, CM084276_1_38961028.1, CM084279_1_1062150.1, CM084277_1_30623529.0, CM084264_1_72054043.1, CM084268_1_82411.0, CM084271_1_44190489.0, CM084276_1_1510348.1, CM084278_1_22667320.0, CM084276_1_38072621.1, CM084265_1_64528148.1, CM084267_1_8118559.1, CM084265_1_71899674.1, CM084264_1_34300890.0, CM084266_1_57889092.0, CM084269_1_1549190.1, CM084264_1_72117233.1, CM084276_1_38558690.1, CM084276_1_62244.0, CM084265_1_68869214.1, CM084271_1_344491.1, CM084279_1_32673936.0",30,"adapter_trim.F1-B6-pH75.bam",-0.43,"adapter_trim.F1-B14-pH75.bam",-0.38,0.81 +"246","adapter_trim.F2-J64-pH75.bam","CM084265_1_46089269.0, CM084268_1_50225017.1, CM084268_1_3699577.1, CM084275_1_19996650.0, CM084266_1_57889035.1, CM084267_1_8118540.1, CM084276_1_38558546.1, CM084267_1_5881751.0, CM084266_1_57882573.0, CM084276_1_38961028.1, CM084279_1_1062150.1, CM084277_1_30623529.0, CM084264_1_72054043.1, CM084268_1_82411.0, CM084271_1_44190489.0, CM084276_1_1510348.1, CM084278_1_22667320.0, CM084276_1_38072621.1, CM084265_1_64528148.1, CM084267_1_8118559.1, CM084265_1_71899674.1, CM084264_1_34300890.0, CM084266_1_57889092.0, CM084269_1_1549190.1, CM084264_1_72117233.1, CM084276_1_38558690.1, CM084276_1_62244.0, CM084265_1_68869214.1, CM084271_1_344491.1, CM084279_1_32673936.0",30,"adapter_trim.F1-B6-pH75.bam",-0.39,"adapter_trim.F1-B8-pH75.bam",-0.19,0.58 +"247","adapter_trim.F2-J68-pH75.bam","CM084265_1_46089269.0, CM084268_1_50225017.1, CM084268_1_3699577.1, CM084275_1_19996650.0, CM084266_1_57889035.1, CM084267_1_8118540.1, CM084276_1_38558546.1, CM084267_1_5881751.0, CM084266_1_57882573.0, CM084276_1_38961028.1, CM084279_1_1062150.1, CM084277_1_30623529.0, CM084264_1_72054043.1, CM084268_1_82411.0, CM084271_1_44190489.0, CM084276_1_1510348.1, CM084278_1_22667320.0, CM084276_1_38072621.1, CM084265_1_64528148.1, CM084267_1_8118559.1, CM084265_1_71899674.1, CM084264_1_34300890.0, CM084266_1_57889092.0, CM084269_1_1549190.1, CM084264_1_72117233.1, CM084276_1_38558690.1, CM084276_1_62244.0, CM084265_1_68869214.1, CM084271_1_344491.1, CM084279_1_32673936.0",30,"adapter_trim.F1-B16-pH75.bam",-0.12,"adapter_trim.F1-B1-pH75.bam",0.05,0.17 +"248","adapter_trim.F2-J62-pH75.bam","CM084265_1_70800987.1, CM084267_1_1134553.1, CM084271_1_43860422.0, CM084271_1_7137729.1, CM084268_1_46382.1, CM084273_1_42287238.1, CM084275_1_2509952.0, CM084272_1_18191738.1, CM084267_1_5165677.1, CM084274_1_4796871.0, CM084266_1_58087794.0, CM084272_1_18188624.0, CM084273_1_31866816.1, CM084274_1_4734039.0, CM084264_1_75278300.0, CM084267_1_1134424.0, CM084275_1_36064332.0, CM084264_1_70190075.0, CM084266_1_58099055.0, CM084277_1_29780093.0, CM084264_1_74191504.1, CM084274_1_4863726.0, CM084269_1_15828545.1, CM084264_1_26773690.1, CM084272_1_18553651.0, CM084264_1_72118711.1, CM084265_1_64196888.1, CM084269_1_12905592.0, CM084269_1_36339693.0, CM084269_1_40336207.0",30,"adapter_trim.F1-B11-pH75.bam",-0.2,"adapter_trim.F1-B8-pH75.bam",-0.32,0.52 +"249","adapter_trim.F2-J63-pH75.bam","CM084265_1_70800987.1, CM084267_1_1134553.1, CM084271_1_43860422.0, CM084271_1_7137729.1, CM084268_1_46382.1, CM084273_1_42287238.1, CM084275_1_2509952.0, CM084272_1_18191738.1, CM084267_1_5165677.1, CM084274_1_4796871.0, CM084266_1_58087794.0, CM084272_1_18188624.0, CM084273_1_31866816.1, CM084274_1_4734039.0, CM084264_1_75278300.0, CM084267_1_1134424.0, CM084275_1_36064332.0, CM084264_1_70190075.0, CM084266_1_58099055.0, CM084277_1_29780093.0, CM084264_1_74191504.1, CM084274_1_4863726.0, CM084269_1_15828545.1, CM084264_1_26773690.1, CM084272_1_18553651.0, CM084264_1_72118711.1, CM084265_1_64196888.1, CM084269_1_12905592.0, CM084269_1_36339693.0, CM084269_1_40336207.0",30,"adapter_trim.F1-B17-pH75.bam",-0.31,"adapter_trim.F1-B9-pH75.bam",0.11,0.42 +"250","adapter_trim.F2-J46-pH75.bam","CM084271_1_44077341.0, CM084265_1_73060663.0, CM084273_1_31864741.0, CM084278_1_22667307.0, CM084271_1_44077319.0, CM084276_1_2855915.0, CM084271_1_3821161.0, CM084265_1_791030.1, CM084264_1_72054052.1, CM084267_1_832141.0, CM084270_1_47076316.1, CM084264_1_12084151.1, CM084276_1_38557410.0, CM084275_1_39502406.1, CM084273_1_31862854.0, CM084265_1_66141834.0, CM084266_1_1233079.0, CM084278_1_16767353.0, CM084265_1_70801101.0, CM084274_1_4788669.0, CM084272_1_1704404.1, CM084276_1_2841296.0, CM084266_1_71166433.1, CM084264_1_70175551.1, CM084277_1_5803906.1, CM084272_1_18194957.0, CM084267_1_699428.0, CM084264_1_69539449.0, CM084268_1_938570.0, CM084264_1_2740171.1",30,"adapter_trim.F1-B6-pH75.bam",-0.31,"adapter_trim.F1-B1-pH75.bam",-0.27,0.58 +"251","adapter_trim.F2-B16-pH75.bam","CM084266_1_71166433.0, CM084274_1_4729950.1, CM084275_1_25397320.1, CM084276_1_1625272.1, CM084272_1_9070882.1, CM084265_1_64969585.0, CM084279_1_32644179.1, CM084267_1_5830233.0, CM084279_1_10147216.0, CM084271_1_43868179.0, CM084265_1_71794444.1, CM084274_1_4793177.0, CM084269_1_1544562.1, CM084271_1_44104315.1, CM084272_1_1704343.1, CM084269_1_42862704.0, CM084276_1_38785504.0, CM084273_1_31861630.1, CM084271_1_289999.0, CM084278_1_23554760.1, CM084266_1_57889053.1, CM084279_1_1063045.0, CM084274_1_4686930.0, CM084274_1_41688611.1, CM084274_1_42906650.1, CM084277_1_30168102.0, CM084275_1_524594.0, CM084279_1_32666444.1, CM084279_1_32652116.0, CM084271_1_19655820.1",30,"adapter_trim.F1-B21-pH75.bam",-0.2,"adapter_trim.F1-B9-pH75.bam",-0.37,0.57 +"252","adapter_trim.F2-J25-pH75.bam","CM084267_1_52896264.1, CM084264_1_74191504.1, CM084268_1_50679469.0, CM084268_1_50225351.0, CM084278_1_15228738.0, CM084268_1_50321855.1, CM084273_1_42253133.0, CM084276_1_37352348.1, CM084275_1_327918.1, CM084279_1_1073128.0, CM084264_1_15073604.0, CM084274_1_4869974.0, CM084269_1_15823188.0, CM084265_1_72368298.1, CM084264_1_70210134.0, CM084264_1_69902276.0, CM084276_1_38558590.0, CM084271_1_10301938.0, CM084274_1_41835817.0, CM084273_1_31862042.1, CM084264_1_73926160.0, CM084276_1_54402.1, CM084278_1_23541053.1, CM084277_1_29782026.0, CM084264_1_34294396.0, CM084271_1_19655878.0, CM084279_1_1512885.1, CM084273_1_32683002.1, CM084274_1_4863779.1, CM084267_1_13261420.1",30,"adapter_trim.F1-B6-pH75.bam",-0.09,"adapter_trim.F1-B8-pH75.bam",0.25,0.34 +"253","adapter_trim.F2-J2-pH75.bam","CM084267_1_52896264.1, CM084264_1_74191504.1, CM084268_1_50679469.0, CM084268_1_50225351.0, CM084278_1_15228738.0, CM084268_1_50321855.1, CM084273_1_42253133.0, CM084276_1_37352348.1, CM084275_1_327918.1, CM084279_1_1073128.0, CM084264_1_15073604.0, CM084274_1_4869974.0, CM084269_1_15823188.0, CM084265_1_72368298.1, CM084264_1_70210134.0, CM084264_1_69902276.0, CM084276_1_38558590.0, CM084271_1_10301938.0, CM084274_1_41835817.0, CM084273_1_31862042.1, CM084264_1_73926160.0, CM084276_1_54402.1, CM084278_1_23541053.1, CM084277_1_29782026.0, CM084264_1_34294396.0, CM084271_1_19655878.0, CM084279_1_1512885.1, CM084273_1_32683002.1, CM084274_1_4863779.1, CM084267_1_13261420.1",30,"adapter_trim.F1-B12-pH75.bam",-0.25,"adapter_trim.F1-B14-pH75.bam",-0.03,0.28 +"254","adapter_trim.F2-J64-pH75.bam","CM084267_1_52896264.1, CM084264_1_74191504.1, CM084268_1_50679469.0, CM084268_1_50225351.0, CM084278_1_15228738.0, CM084268_1_50321855.1, CM084273_1_42253133.0, CM084276_1_37352348.1, CM084275_1_327918.1, CM084279_1_1073128.0, CM084264_1_15073604.0, CM084274_1_4869974.0, CM084269_1_15823188.0, CM084265_1_72368298.1, CM084264_1_70210134.0, CM084264_1_69902276.0, CM084276_1_38558590.0, CM084271_1_10301938.0, CM084274_1_41835817.0, CM084273_1_31862042.1, CM084264_1_73926160.0, CM084276_1_54402.1, CM084278_1_23541053.1, CM084277_1_29782026.0, CM084264_1_34294396.0, CM084271_1_19655878.0, CM084279_1_1512885.1, CM084273_1_32683002.1, CM084274_1_4863779.1, CM084267_1_13261420.1",30,"adapter_trim.F1-B11-pH75.bam",-0.03,"adapter_trim.F1-B9-pH75.bam",-0.13,0.16 +"255","adapter_trim.F2-J65-pH75.bam","CM084267_1_52896264.1, CM084264_1_74191504.1, CM084268_1_50679469.0, CM084268_1_50225351.0, CM084278_1_15228738.0, CM084268_1_50321855.1, CM084273_1_42253133.0, CM084276_1_37352348.1, CM084275_1_327918.1, CM084279_1_1073128.0, CM084264_1_15073604.0, CM084274_1_4869974.0, CM084269_1_15823188.0, CM084265_1_72368298.1, CM084264_1_70210134.0, CM084264_1_69902276.0, CM084276_1_38558590.0, CM084271_1_10301938.0, CM084274_1_41835817.0, CM084273_1_31862042.1, CM084264_1_73926160.0, CM084276_1_54402.1, CM084278_1_23541053.1, CM084277_1_29782026.0, CM084264_1_34294396.0, CM084271_1_19655878.0, CM084279_1_1512885.1, CM084273_1_32683002.1, CM084274_1_4863779.1, CM084267_1_13261420.1",30,"adapter_trim.F1-B12-pH75.bam",-0.15,"adapter_trim.F1-B14-pH75.bam",-0.15,0.3 +"256","adapter_trim.F2-B22-pH75.bam","CM084267_1_52896264.1, CM084264_1_74191504.1, CM084268_1_50679469.0, CM084268_1_50225351.0, CM084278_1_15228738.0, CM084268_1_50321855.1, CM084273_1_42253133.0, CM084276_1_37352348.1, CM084275_1_327918.1, CM084279_1_1073128.0, CM084264_1_15073604.0, CM084274_1_4869974.0, CM084269_1_15823188.0, CM084265_1_72368298.1, CM084264_1_70210134.0, CM084264_1_69902276.0, CM084276_1_38558590.0, CM084271_1_10301938.0, CM084274_1_41835817.0, CM084273_1_31862042.1, CM084264_1_73926160.0, CM084276_1_54402.1, CM084278_1_23541053.1, CM084277_1_29782026.0, CM084264_1_34294396.0, CM084271_1_19655878.0, CM084279_1_1512885.1, CM084273_1_32683002.1, CM084274_1_4863779.1, CM084267_1_13261420.1",30,"adapter_trim.F1-B17-pH75.bam",-0.37,"adapter_trim.F1-B8-pH75.bam",-0.26,0.63 +"257","adapter_trim.F2-J10-pH75.bam","CM084276_1_11709771.1, CM084273_1_31864421.1, CM084270_1_2585592.0, CM084270_1_46589385.1, CM084274_1_21938486.0, CM084264_1_2738113.1, CM084278_1_8558512.1, CM084279_1_32640564.1, CM084269_1_46688879.0, CM084278_1_25832327.1, CM084265_1_71899669.1, CM084274_1_4792352.0, CM084276_1_1625257.0, CM084266_1_67239897.0, CM084277_1_10417524.0, CM084266_1_66483855.0, CM084267_1_6420828.1, CM084270_1_47076332.0, CM084272_1_33571767.0, CM084265_1_1062161.1, CM084267_1_2135741.0, CM084277_1_5803945.1, CM084274_1_4708748.1, CM084265_1_68806466.0, CM084277_1_30642880.1, CM084265_1_69381524.0, CM084274_1_4788669.0, CM084268_1_28845446.0, CM084264_1_69298657.1, CM084274_1_4862014.0",30,"adapter_trim.F1-B11-pH75.bam",-0.12,"adapter_trim.F1-B20-pH75.bam",-0.07,0.19 +"258","adapter_trim.F2-J31-pH75.bam","CM084278_1_8558512.0, CM084273_1_32698886.1, CM084264_1_2737868.0, CM084273_1_42253181.0, CM084276_1_1856639.0, CM084275_1_667184.0, CM084265_1_72636296.1, CM084276_1_38489687.0, CM084267_1_6421241.0, CM084276_1_12392691.0, CM084264_1_64487839.0, CM084274_1_4674050.0, CM084265_1_70597838.1, CM084273_1_31865682.0, CM084278_1_31960662.0, CM084267_1_51167077.1, CM084273_1_42287238.0, CM084266_1_65298589.1, CM084275_1_4345059.0, CM084265_1_73060807.1, CM084266_1_23321806.1, CM084265_1_24898734.1, CM084271_1_3818665.0, CM084265_1_70975032.1, CM084270_1_46589386.0, CM084275_1_661848.0, CM084266_1_68642404.0, CM084277_1_30611561.0, CM084274_1_4868385.0, CM084269_1_39737118.1",30,"adapter_trim.F1-B6-pH75.bam",-0.24,"adapter_trim.F1-B20-pH75.bam",0.03,0.27 +"259","adapter_trim.F2-J13-pH75.bam","CM084273_1_31865682.1, CM084279_1_1062144.0, CM084269_1_45238238.1, CM084276_1_25809361.0, CM084266_1_67239927.0, CM084271_1_7136527.1, CM084267_1_3204556.1, CM084268_1_24030404.0, CM084271_1_37237148.0, CM084272_1_43469474.1, CM084266_1_68882944.1, CM084266_1_70396060.1, CM084279_1_31409037.0, CM084271_1_19655927.1, CM084271_1_43849883.1, CM084265_1_71925486.1, CM084276_1_38787722.0, CM084279_1_33759487.0, CM084271_1_44083919.1, CM084266_1_57884345.0, CM084275_1_126552.0, CM084276_1_38117244.1, CM084278_1_16774023.0, CM084266_1_64726664.1, CM084279_1_30773321.0, CM084264_1_73931173.0, CM084275_1_35720346.1, 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CM084270_1_9401006.0, CM084278_1_4074395.0, CM084270_1_47076316.0, CM084266_1_64164374.0, CM084268_1_3703420.0, CM084264_1_73311149.1, CM084264_1_66522465.0, CM084271_1_43816629.1, CM084274_1_4720394.0, CM084274_1_4793160.1, CM084269_1_12905562.1, CM084279_1_32662843.0, CM084276_1_38558585.1, CM084278_1_22645215.1",30,"adapter_trim.F1-B6-pH75.bam",-0.35,"adapter_trim.F1-B4-pH75.bam",-0.05,0.4 +"264","adapter_trim.F2-J31-pH75.bam","CM084275_1_2509498.1, CM084279_1_161074.1, CM084276_1_54402.0, CM084274_1_4863301.1, CM084266_1_70743740.0, CM084276_1_12392697.1, CM084264_1_70175562.0, CM084274_1_4773492.0, CM084266_1_69315458.0, CM084266_1_57882847.0, CM084271_1_43934405.0, CM084265_1_60313980.1, CM084271_1_19655912.1, CM084269_1_47265300.0, CM084264_1_70456944.1, CM084278_1_32252661.1, CM084270_1_9401006.0, CM084278_1_4074395.0, CM084270_1_47076316.0, CM084266_1_64164374.0, CM084268_1_3703420.0, CM084264_1_73311149.1, CM084264_1_66522465.0, CM084271_1_43816629.1, CM084274_1_4720394.0, 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CM084278_1_22645215.1",30,"adapter_trim.F1-B21-pH75.bam",-0.2,"adapter_trim.F1-B1-pH75.bam",-0.54,0.74 +"271","adapter_trim.F2-J61-pH75.bam","CM084274_1_4869924.1, CM084264_1_75278300.0, CM084267_1_5952857.0, CM084265_1_72368172.1, CM084273_1_31864421.1, CM084278_1_24948349.0, CM084269_1_45420483.0, CM084276_1_38772791.1, CM084270_1_4920911.0, CM084277_1_31296172.0, CM084275_1_667184.1, CM084269_1_12905597.0, CM084274_1_6125439.1, CM084276_1_38772791.0, CM084276_1_771542.0, CM084265_1_19672164.1, CM084273_1_31865409.0, CM084265_1_64586070.1, CM084275_1_35717367.0, CM084266_1_64723799.1, CM084272_1_33453681.0, CM084267_1_52593775.1, CM084267_1_5161043.1, CM084265_1_71925202.0, CM084266_1_68883042.1, CM084277_1_1868699.1, CM084273_1_7839325.1, CM084264_1_73926180.1, CM084269_1_45238132.1, CM084267_1_2908852.0",30,"adapter_trim.F1-B17-pH75.bam",0.02,"adapter_trim.F1-B4-pH75.bam",0.05,0.07 +"272","adapter_trim.F2-J62-pH75.bam","CM084274_1_4869924.1, CM084264_1_75278300.0, CM084267_1_5952857.0, CM084265_1_72368172.1, CM084273_1_31864421.1, CM084278_1_24948349.0, CM084269_1_45420483.0, CM084276_1_38772791.1, CM084270_1_4920911.0, CM084277_1_31296172.0, CM084275_1_667184.1, CM084269_1_12905597.0, CM084274_1_6125439.1, CM084276_1_38772791.0, CM084276_1_771542.0, CM084265_1_19672164.1, CM084273_1_31865409.0, CM084265_1_64586070.1, CM084275_1_35717367.0, CM084266_1_64723799.1, CM084272_1_33453681.0, CM084267_1_52593775.1, CM084267_1_5161043.1, CM084265_1_71925202.0, CM084266_1_68883042.1, CM084277_1_1868699.1, CM084273_1_7839325.1, CM084264_1_73926180.1, CM084269_1_45238132.1, CM084267_1_2908852.0",30,"adapter_trim.F1-B6-pH75.bam",-0.42,"adapter_trim.F1-B14-pH75.bam",-0.28,0.7 +"273","adapter_trim.F2-J64-pH75.bam","CM084274_1_4869924.1, CM084264_1_75278300.0, CM084267_1_5952857.0, CM084265_1_72368172.1, CM084273_1_31864421.1, CM084278_1_24948349.0, CM084269_1_45420483.0, CM084276_1_38772791.1, CM084270_1_4920911.0, CM084277_1_31296172.0, CM084275_1_667184.1, CM084269_1_12905597.0, CM084274_1_6125439.1, CM084276_1_38772791.0, CM084276_1_771542.0, CM084265_1_19672164.1, CM084273_1_31865409.0, CM084265_1_64586070.1, CM084275_1_35717367.0, CM084266_1_64723799.1, CM084272_1_33453681.0, CM084267_1_52593775.1, CM084267_1_5161043.1, CM084265_1_71925202.0, CM084266_1_68883042.1, CM084277_1_1868699.1, CM084273_1_7839325.1, CM084264_1_73926180.1, CM084269_1_45238132.1, CM084267_1_2908852.0",30,"adapter_trim.F1-B16-pH75.bam",-0.06,"adapter_trim.F1-B20-pH75.bam",-0.33,0.39 +"274","adapter_trim.F2-J13-pH75.bam","CM084266_1_65347078.1, CM084269_1_42862797.0, CM084278_1_23541053.0, CM084274_1_4709677.1, CM084271_1_43934405.0, CM084265_1_66143629.1, CM084272_1_26336261.1, CM084265_1_70977429.1, CM084269_1_47255758.0, CM084266_1_64164380.1, CM084267_1_2908060.0, CM084274_1_3692513.0, CM084266_1_63468226.1, CM084264_1_34300890.0, CM084275_1_529192.1, CM084267_1_2652774.1, CM084264_1_73927178.1, CM084266_1_68320526.0, CM084272_1_43469474.0, CM084274_1_5028297.1, CM084272_1_33571757.1, CM084265_1_794843.0, CM084275_1_35720341.0, CM084268_1_41971.0, CM084277_1_6198930.0, CM084268_1_14768218.0, CM084268_1_1326643.1, CM084279_1_1064861.1, CM084268_1_49719767.0, CM084269_1_1567129.0",30,"adapter_trim.F1-B21-pH75.bam",-0.05,"adapter_trim.F1-B9-pH75.bam",-0.16,0.21 +"275","adapter_trim.F2-J43-pH75.bam","CM084266_1_65347078.1, CM084269_1_42862797.0, CM084278_1_23541053.0, CM084274_1_4709677.1, CM084271_1_43934405.0, CM084265_1_66143629.1, CM084272_1_26336261.1, CM084265_1_70977429.1, CM084269_1_47255758.0, CM084266_1_64164380.1, CM084267_1_2908060.0, CM084274_1_3692513.0, CM084266_1_63468226.1, CM084264_1_34300890.0, CM084275_1_529192.1, CM084267_1_2652774.1, CM084264_1_73927178.1, CM084266_1_68320526.0, CM084272_1_43469474.0, CM084274_1_5028297.1, CM084272_1_33571757.1, CM084265_1_794843.0, CM084275_1_35720341.0, CM084268_1_41971.0, CM084277_1_6198930.0, CM084268_1_14768218.0, CM084268_1_1326643.1, CM084279_1_1064861.1, CM084268_1_49719767.0, CM084269_1_1567129.0",30,"adapter_trim.F1-B6-pH75.bam",0.07,"adapter_trim.F1-B4-pH75.bam",-0.18,0.25 +"276","adapter_trim.F2-J46-pH75.bam","CM084266_1_65347078.1, CM084269_1_42862797.0, CM084278_1_23541053.0, CM084274_1_4709677.1, CM084271_1_43934405.0, CM084265_1_66143629.1, CM084272_1_26336261.1, CM084265_1_70977429.1, CM084269_1_47255758.0, CM084266_1_64164380.1, CM084267_1_2908060.0, CM084274_1_3692513.0, CM084266_1_63468226.1, CM084264_1_34300890.0, CM084275_1_529192.1, CM084267_1_2652774.1, CM084264_1_73927178.1, CM084266_1_68320526.0, CM084272_1_43469474.0, CM084274_1_5028297.1, CM084272_1_33571757.1, CM084265_1_794843.0, CM084275_1_35720341.0, CM084268_1_41971.0, CM084277_1_6198930.0, CM084268_1_14768218.0, CM084268_1_1326643.1, CM084279_1_1064861.1, CM084268_1_49719767.0, CM084269_1_1567129.0",30,"adapter_trim.F1-B16-pH75.bam",0.12,"adapter_trim.F1-B9-pH75.bam",-0.22,0.34 +"277","adapter_trim.F2-J68-pH75.bam","CM084266_1_65347078.1, CM084269_1_42862797.0, CM084278_1_23541053.0, CM084274_1_4709677.1, CM084271_1_43934405.0, CM084265_1_66143629.1, CM084272_1_26336261.1, CM084265_1_70977429.1, CM084269_1_47255758.0, CM084266_1_64164380.1, CM084267_1_2908060.0, CM084274_1_3692513.0, CM084266_1_63468226.1, CM084264_1_34300890.0, CM084275_1_529192.1, CM084267_1_2652774.1, CM084264_1_73927178.1, CM084266_1_68320526.0, CM084272_1_43469474.0, CM084274_1_5028297.1, CM084272_1_33571757.1, CM084265_1_794843.0, CM084275_1_35720341.0, CM084268_1_41971.0, CM084277_1_6198930.0, CM084268_1_14768218.0, CM084268_1_1326643.1, CM084279_1_1064861.1, CM084268_1_49719767.0, CM084269_1_1567129.0",30,"adapter_trim.F1-B12-pH75.bam",-0.23,"adapter_trim.F1-B9-pH75.bam",-0.08,0.31 +"278","adapter_trim.F2-J46-pH75.bam","CM084269_1_1556253.0, CM084267_1_6420828.0, CM084275_1_660866.1, CM084271_1_26325716.1, CM084270_1_10496921.1, CM084278_1_22667330.1, CM084274_1_29871125.1, CM084264_1_68689028.0, CM084271_1_37244915.0, CM084266_1_69085644.1, CM084271_1_19934424.1, CM084266_1_69314162.1, CM084274_1_4795468.1, CM084279_1_1072367.1, CM084276_1_36515301.0, CM084268_1_276378.1, CM084277_1_36522229.1, CM084279_1_10149633.0, CM084264_1_72075479.1, CM084279_1_10157014.1, CM084267_1_50994193.1, CM084278_1_23540735.1, CM084274_1_4695106.1, CM084275_1_23095265.1, CM084264_1_75512070.1, CM084274_1_4708063.1, CM084276_1_38772790.1, CM084273_1_42253181.1, CM084266_1_71149023.0, CM084277_1_30026693.1",30,"adapter_trim.F1-B17-pH75.bam",-0.24,"adapter_trim.F1-B1-pH75.bam",-0.1,0.34 +"279","adapter_trim.F2-J50-pH75.bam","CM084269_1_1556253.0, CM084267_1_6420828.0, CM084275_1_660866.1, CM084271_1_26325716.1, CM084270_1_10496921.1, CM084278_1_22667330.1, CM084274_1_29871125.1, CM084264_1_68689028.0, CM084271_1_37244915.0, CM084266_1_69085644.1, CM084271_1_19934424.1, CM084266_1_69314162.1, CM084274_1_4795468.1, CM084279_1_1072367.1, CM084276_1_36515301.0, CM084268_1_276378.1, CM084277_1_36522229.1, CM084279_1_10149633.0, CM084264_1_72075479.1, CM084279_1_10157014.1, CM084267_1_50994193.1, CM084278_1_23540735.1, CM084274_1_4695106.1, CM084275_1_23095265.1, CM084264_1_75512070.1, CM084274_1_4708063.1, CM084276_1_38772790.1, CM084273_1_42253181.1, CM084266_1_71149023.0, CM084277_1_30026693.1",30,"adapter_trim.F1-B21-pH75.bam",-0.25,"adapter_trim.F1-B1-pH75.bam",-0.36,0.61 +"280","adapter_trim.F2-J70-pH75.bam","CM084269_1_1556253.0, CM084267_1_6420828.0, CM084275_1_660866.1, CM084271_1_26325716.1, CM084270_1_10496921.1, CM084278_1_22667330.1, CM084274_1_29871125.1, CM084264_1_68689028.0, CM084271_1_37244915.0, CM084266_1_69085644.1, CM084271_1_19934424.1, CM084266_1_69314162.1, CM084274_1_4795468.1, CM084279_1_1072367.1, CM084276_1_36515301.0, CM084268_1_276378.1, CM084277_1_36522229.1, CM084279_1_10149633.0, CM084264_1_72075479.1, CM084279_1_10157014.1, CM084267_1_50994193.1, CM084278_1_23540735.1, CM084274_1_4695106.1, CM084275_1_23095265.1, CM084264_1_75512070.1, CM084274_1_4708063.1, CM084276_1_38772790.1, CM084273_1_42253181.1, CM084266_1_71149023.0, CM084277_1_30026693.1",30,"adapter_trim.F1-B16-pH75.bam",-0.44,"adapter_trim.F1-B20-pH75.bam",0.09,0.53 +"281","adapter_trim.F2-B10-pH75.bam","CM084269_1_1556253.0, CM084267_1_6420828.0, CM084275_1_660866.1, CM084271_1_26325716.1, CM084270_1_10496921.1, CM084278_1_22667330.1, CM084274_1_29871125.1, CM084264_1_68689028.0, CM084271_1_37244915.0, CM084266_1_69085644.1, CM084271_1_19934424.1, CM084266_1_69314162.1, CM084274_1_4795468.1, CM084279_1_1072367.1, CM084276_1_36515301.0, CM084268_1_276378.1, CM084277_1_36522229.1, CM084279_1_10149633.0, CM084264_1_72075479.1, CM084279_1_10157014.1, CM084267_1_50994193.1, CM084278_1_23540735.1, CM084274_1_4695106.1, CM084275_1_23095265.1, CM084264_1_75512070.1, CM084274_1_4708063.1, CM084276_1_38772790.1, CM084273_1_42253181.1, CM084266_1_71149023.0, CM084277_1_30026693.1",30,"adapter_trim.F1-B21-pH75.bam",-0.47,"adapter_trim.F1-B1-pH75.bam",-0.46,0.93 +"282","adapter_trim.F2-J2-pH75.bam","CM084278_1_23536520.0, CM084276_1_37352422.1, CM084268_1_28845439.0, CM084270_1_4920935.0, CM084265_1_72071366.1, CM084278_1_23541019.0, CM084265_1_69009992.0, CM084269_1_15826462.0, CM084268_1_4036222.0, CM084271_1_3814148.0, CM084276_1_6688311.0, CM084274_1_7449618.0, CM084265_1_1062161.1, CM084266_1_70940178.0, CM084266_1_68478650.0, CM084269_1_39737155.0, CM084266_1_69315469.1, CM084265_1_60215543.1, CM084275_1_524596.0, CM084279_1_10147284.1, CM084279_1_16586120.1, CM084264_1_70175551.0, CM084272_1_18170845.1, CM084266_1_68659869.1, CM084265_1_1229890.1, CM084271_1_344493.0, CM084264_1_70174612.1, CM084271_1_43868179.0, CM084265_1_71820726.0, CM084264_1_74273479.0",30,"adapter_trim.F1-B6-pH75.bam",-0.19,"adapter_trim.F1-B20-pH75.bam",-0.44,0.63 +"283","adapter_trim.F2-J3-pH75.bam","CM084278_1_23536520.0, CM084276_1_37352422.1, CM084268_1_28845439.0, CM084270_1_4920935.0, CM084265_1_72071366.1, CM084278_1_23541019.0, CM084265_1_69009992.0, CM084269_1_15826462.0, CM084268_1_4036222.0, CM084271_1_3814148.0, CM084276_1_6688311.0, CM084274_1_7449618.0, CM084265_1_1062161.1, CM084266_1_70940178.0, CM084266_1_68478650.0, CM084269_1_39737155.0, CM084266_1_69315469.1, CM084265_1_60215543.1, CM084275_1_524596.0, CM084279_1_10147284.1, CM084279_1_16586120.1, CM084264_1_70175551.0, CM084272_1_18170845.1, CM084266_1_68659869.1, CM084265_1_1229890.1, CM084271_1_344493.0, CM084264_1_70174612.1, CM084271_1_43868179.0, CM084265_1_71820726.0, CM084264_1_74273479.0",30,"adapter_trim.F1-B21-pH75.bam",-0.2,"adapter_trim.F1-B1-pH75.bam",-0.3,0.5 +"284","adapter_trim.F2-J49-pH75.bam","CM084278_1_23536520.0, CM084276_1_37352422.1, CM084268_1_28845439.0, CM084270_1_4920935.0, CM084265_1_72071366.1, CM084278_1_23541019.0, CM084265_1_69009992.0, CM084269_1_15826462.0, CM084268_1_4036222.0, CM084271_1_3814148.0, CM084276_1_6688311.0, CM084274_1_7449618.0, CM084265_1_1062161.1, CM084266_1_70940178.0, CM084266_1_68478650.0, CM084269_1_39737155.0, CM084266_1_69315469.1, CM084265_1_60215543.1, CM084275_1_524596.0, CM084279_1_10147284.1, CM084279_1_16586120.1, CM084264_1_70175551.0, CM084272_1_18170845.1, CM084266_1_68659869.1, CM084265_1_1229890.1, CM084271_1_344493.0, CM084264_1_70174612.1, CM084271_1_43868179.0, CM084265_1_71820726.0, CM084264_1_74273479.0",30,"adapter_trim.F1-B6-pH75.bam",-0.28,"adapter_trim.F1-B14-pH75.bam",0.11,0.39 +"285","adapter_trim.F2-J65-pH75.bam","CM084278_1_23536520.0, CM084276_1_37352422.1, CM084268_1_28845439.0, CM084270_1_4920935.0, CM084265_1_72071366.1, CM084278_1_23541019.0, CM084265_1_69009992.0, CM084269_1_15826462.0, CM084268_1_4036222.0, CM084271_1_3814148.0, CM084276_1_6688311.0, CM084274_1_7449618.0, CM084265_1_1062161.1, CM084266_1_70940178.0, CM084266_1_68478650.0, CM084269_1_39737155.0, CM084266_1_69315469.1, CM084265_1_60215543.1, CM084275_1_524596.0, CM084279_1_10147284.1, CM084279_1_16586120.1, CM084264_1_70175551.0, CM084272_1_18170845.1, CM084266_1_68659869.1, CM084265_1_1229890.1, CM084271_1_344493.0, CM084264_1_70174612.1, CM084271_1_43868179.0, CM084265_1_71820726.0, CM084264_1_74273479.0",30,"adapter_trim.F1-B12-pH75.bam",-0.12,"adapter_trim.F1-B4-pH75.bam",0.05,0.17 +"286","adapter_trim.F2-J25-pH75.bam","CM084268_1_28845446.0, CM084278_1_20734376.0, CM084265_1_71831292.1, CM084279_1_31409578.0, CM084268_1_50219223.0, CM084276_1_38775936.0, CM084264_1_70182858.0, CM084272_1_1327530.0, CM084266_1_50301498.0, CM084271_1_43868201.0, CM084278_1_22667296.1, CM084265_1_72368245.1, CM084266_1_70743731.0, CM084266_1_57882573.1, CM084279_1_1072380.0, CM084268_1_282153.1, CM084267_1_2081902.0, CM084270_1_47103324.0, CM084273_1_32683016.1, CM084266_1_68960355.0, CM084271_1_3814120.1, CM084269_1_47563826.1, CM084267_1_2104179.0, CM084275_1_40706380.0, CM084265_1_69913596.0, CM084278_1_8558566.1, CM084267_1_2908957.0, CM084274_1_4778496.1, CM084270_1_1391764.1, 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CM084265_1_70589360.1, CM084264_1_74191574.1, CM084272_1_43480818.1, CM084266_1_68320526.0, CM084264_1_68688356.1, CM084268_1_50202371.1, CM084274_1_4792256.0, CM084266_1_69806293.0, CM084270_1_8242343.0, CM084265_1_72071381.0, CM084264_1_69275359.1, CM084271_1_3816215.0, CM084276_1_38773525.1, CM084276_1_38552579.1, CM084268_1_1508049.1, CM084275_1_327918.1, CM084274_1_4727318.1, CM084276_1_37355346.0, CM084269_1_1558052.1, CM084265_1_70799357.0, CM084271_1_289999.1, CM084264_1_68685021.1, CM084278_1_5142968.1, CM084265_1_69004202.1, CM084266_1_62468799.0, CM084279_1_10147216.1, CM084272_1_33578227.1","30","-0.57","-0.35","0.92","1, 4","2","FALSE" +"287","adapter_trim.F1-B9-pH75.bam","adapter_trim.F1-B16-pH75.bam","adapter_trim.F2-J61-pH75.bam","CM084278_1_22644846.1, CM084278_1_5144630.1, CM084264_1_72054205.1, CM084265_1_70589360.1, CM084264_1_74191574.1, CM084272_1_43480818.1, CM084266_1_68320526.0, CM084264_1_68688356.1, CM084268_1_50202371.1, CM084274_1_4792256.0, CM084266_1_69806293.0, CM084270_1_8242343.0, CM084265_1_72071381.0, CM084264_1_69275359.1, CM084271_1_3816215.0, CM084276_1_38773525.1, CM084276_1_38552579.1, CM084268_1_1508049.1, CM084275_1_327918.1, CM084274_1_4727318.1, CM084276_1_37355346.0, CM084269_1_1558052.1, CM084265_1_70799357.0, CM084271_1_289999.1, CM084264_1_68685021.1, CM084278_1_5142968.1, CM084265_1_69004202.1, CM084266_1_62468799.0, CM084279_1_10147216.1, CM084272_1_33578227.1","30","-0.24","-0.15","0.39","3","2","FALSE" +"288","adapter_trim.F1-B9-pH75.bam","adapter_trim.F1-B12-pH75.bam","adapter_trim.F2-J6-pH75.bam","CM084278_1_29698392.0, CM084268_1_28845439.1, CM084265_1_72071414.1, CM084264_1_73926180.0, CM084265_1_71827765.1, CM084275_1_66811.0, CM084276_1_54402.0, CM084276_1_38785504.1, CM084271_1_37237149.0, CM084279_1_10150674.1, CM084274_1_4870202.1, CM084275_1_39780930.0, CM084275_1_1304711.0, CM084278_1_20591128.1, CM084266_1_57888640.0, CM084274_1_4727166.1, CM084270_1_4920935.1, CM084265_1_8362532.1, CM084264_1_70174663.0, CM084277_1_30168106.0, CM084276_1_37353154.0, CM084276_1_38552515.1, CM084264_1_64487839.1, CM084265_1_68869214.1, CM084274_1_11694910.1, CM084266_1_23317745.1, CM084266_1_69051080.0, CM084273_1_31862179.1, CM084267_1_6421491.0, CM084268_1_28845439.1","30","-0.03","-0.02","0.05","2","2","TRUE" +"289","adapter_trim.F1-B9-pH75.bam","adapter_trim.F1-B21-pH75.bam","adapter_trim.F2-J10-pH75.bam","CM084274_1_5028288.0, CM084277_1_36519423.1, CM084278_1_23554760.0, CM084267_1_2233926.0, CM084271_1_37237146.0, CM084271_1_30532481.0, CM084267_1_5168533.0, CM084269_1_1549398.0, CM084266_1_70940178.1, CM084266_1_69085566.0, CM084274_1_4788646.1, CM084279_1_160989.0, CM084271_1_3819803.0, CM084269_1_4636883.0, CM084275_1_1304711.0, CM084265_1_71827811.1, CM084269_1_39737118.1, CM084270_1_1559802.0, CM084273_1_31862042.0, CM084266_1_65298589.1, CM084266_1_66485296.1, CM084276_1_1855851.0, CM084270_1_8242343.1, CM084274_1_4727318.1, CM084278_1_16773822.1, CM084269_1_46858338.0, CM084278_1_23542095.1, CM084276_1_25975836.1, CM084268_1_273292.1, CM084277_1_30611511.0","30","-0.25","-0.14","0.39","1","2","FALSE" +"290","adapter_trim.F1-B9-pH75.bam","adapter_trim.F1-B11-pH75.bam","adapter_trim.F2-J66-pH75.bam","CM084279_1_33014997.1, CM084271_1_1034868.0, CM084267_1_2908957.0, CM084276_1_4855640.0, CM084276_1_37353147.0, CM084273_1_31862179.0, CM084266_1_66485296.0, CM084268_1_22040366.0, CM084264_1_39013.1, CM084272_1_1894340.1, CM084277_1_30026693.1, CM084276_1_25975836.1, CM084267_1_5952857.0, CM084266_1_71166433.1, CM084279_1_1079183.0, CM084276_1_38489687.1, CM084265_1_71853183.0, CM084274_1_4778747.0, CM084270_1_47077463.1, CM084265_1_3130640.0, CM084264_1_72054047.1, CM084265_1_59221213.0, CM084279_1_32666436.1, CM084272_1_18194972.0, CM084277_1_30611605.1, CM084279_1_10156950.1, CM084279_1_10156946.1, CM084266_1_52832550.1, CM084267_1_50994309.0, CM084266_1_69623578.1","30","-0.01","-0.21","0.22","2, 4","2","TRUE" diff --git a/RAnalysis/Scripts/Popgen/.Rhistory b/RAnalysis/Scripts/Popgen/.Rhistory index ce9da5f..cd51720 100644 --- a/RAnalysis/Scripts/Popgen/.Rhistory +++ b/RAnalysis/Scripts/Popgen/.Rhistory @@ -1,512 +1,512 @@ -"out.7.phased.vcf.gz"), verbose = FALSE) -dna <- ape::read.dna("C:/Users/samjg/Documents/Bioinformatics/refs/Airradians/GCF_041381155.1_Ai_NY_genomic.fna", format = "fasta") -?MakeAgePrior -# F0 are 1:26 -# F1 juveniles are 63:139 -colnames(vcf@gt) -knitr::opts_chunk$set(echo = TRUE) -# SET WORKING DIRECTORY -knitr::opts_knit$set(root.dir = "C:/Users/samjg/Documents/Github_repositories/EAD-ASEB-Airradians_Popgen_OA/") # Sam's -#knitr::opts_knit$set(root.dir = "C:/Users/samuel.gurr/Documents/Github_repositories/EAD-ASEB-Airradians_Popgen_OA/") # Sam's -getwd() -F1.Parentage <- read.csv(here::here(getwd(). -F1.Parentage <- read.csv(here::here(getwd(). -here::here(getwd(). -here::here(getwd(). -F1.Parentage <- read.csv(here::here(getwd(), -"RAnalysis/Data/Popgen/Parentages", -"F1_parentage,csv"), sep = ',', head = T) -here::here(getwd(), -"RAnalysis/Data/Popgen/Parentages", -"F1_parentage,csv" -here::here(getwd(), -"RAnalysis/Data/Popgen/Parentages", -"F1_parentage,csv" -F1.Parentage <- read.csv(here::here(getwd(), -"RAnalysis/Data/Popgen/Parentages", -"F1_parentage,csv"), sep = ',', head = T) -F1.Parentage <- read.csv("RAnalysis/Data/Popgen/Parentages/F1_parentage,csv", sep = ',', head = T) -F1.Parentage <- read.csv(past0(getwd(),"RAnalysis/Data/Popgen/Parentages/F1_parentage,csv"), sep = ',', head = T) -F1.Parentage <- read.csv(paste0(getwd(),"RAnalysis/Data/Popgen/Parentages/F1_parentage,csv"), sep = ',', head = T) -paste0(getwd(),"RAnalysis/Data/Popgen/Parentages/F1_parentage,csv") -F1.Parentage <- read.csv(paste0(getwd(),"RAnalysis/Data/Popgen/Parentages/F1_parentage.csv"), sep = ',', head = T) -F1.Parentage <- read.csv(paste0(getwd(),"RAnalysis/Data/Popgen/Parentages/F1_parentage.csv"), sep = ',', head = T) -paste0(getwd(),"RAnalysis/Data/Popgen/Parentages/F1_parentage.csv") -F1.Parentage <- read.csv(paste0(getwd(),"/RAnalysis/Data/Popgen/Parentages/F1_parentage.csv"), sep = ',', head = T) -F2.Parentage <- read.csv(paste0(getwd(),"/RAnalysis/Data/Popgen/Parentages/F2_parentage.csv"), -sep = ',', -head = T) -F3.Parentage <- read.csv(paste0(getwd(),"/RAnalysis/Data/Popgen/Parentages/F3_parentage.csv"), -sep = ',', -head = T) -All.vcf <- vcfR::read.vcfR(here::here(getwd(), -"RAnalysis", -"Data", -"Popgen", -"03_prune", -"out.7.phased.vcf.gz"), verbose = FALSE) -dna <- ape::read.dna("C:/Users/samjg/Documents/Bioinformatics/refs/Airradians/GCF_041381155.1_Ai_NY_genomic.fna", format = "fasta") -dna_chroms <- (dna)[1:16] -dna_chroms -# subset for F10 and F1 juveniles -F1.Parentage.vcf <- vcf[,c(1:26,63:139)] -colnames(F1.Parentage.vcf@gt) -colnames(F1.Parentage.vcf@gt([2:length(F1.Parentage.vcf@gt)]))# sanity check, quantify -colnames(F1.Parentage.vcf@gt)# sanity check, quantify -F1.Parentage.vcf -F1.Parentage.vcf@gt -(ncol(F1.Parentage.vcf@gt)-1) == nrow(F1.Parentage) -nrow(F1.Parentage) -(ncol(F1.Parentage.vcf@gt)-1) -F1.Parentage.vcf@gt -colnames(F1.Parentage.vcf@gt) # sanity check, visual -# F0 are 1:26 -F1.Parentage.vcf@gt[1:26] -# F0 are 1:26 -F1.Parentage.vcf@gt[,1:26] -# F0 are 1:26 -F1.Parentage.vcf@gt[,2:26] -# F1 juveniles are 63:139 -colnames(vcf@gt) -# F0 are 2:26 -F1.Parentage.vcf@gt[,2:26] -# F0 are 2:26 -F1.Parentage.vcf@gt[2:26,] -# F0 are 2:26 -F1.Parentage.vcf@gt[2:26] -F1.Parentage.vcf@gt -# F0 are 2:26 -colnames(F1.Parentage.vcf@gt)[,2:26] -colnames(F1.Parentage.vcf@gt) -# F0 are 2:26 -colnames(F1.Parentage.vcf@gt[,2:26]) -gsub('*.adapter_','',All.vcf@gt -gsub('*.adapter_','',All.vcf@gt) -gsub('.*adapter_','',All.vcf@gt) -gsub('.*adapter_','',colnames(All.vcf@gt)) -gsub('.*adapter_trim','',colnames(All.vcf@gt)) -str_match(colnames(All.vcf@gt), "adapter_trim\\s*(.*?)\\s*[.]bam") -str_match(colnames(All.vcf@gt), "adapter_trim[,]\\s*(.*?)\\s*[.]bam") -str_match(colnames(All.vcf@gt), "adapter_trim[.]\\s*(.*?)\\s*[.]bam") -colnames(All.vcf@gt[2:ncol(All.vcf)]) -2:ncol(All.vcf) -2:ncol(All.vcf@gt) -colnames(All.vcf@gt[2:ncol(All.vcf@gt)]) -All.vcf@gt[2:ncol(All.vcf@gt)] -All.vcf@gt[,2:ncol(All.vcf@gt)] -All.vcf@gt[2:ncol(All.vcf@gt),] -colnames(All.vcf@gt[2:ncol(All.vcf@gt)]) -length(All.vcf@gt) -ncol(All.vcf@gt) -colnames(All.vcf@gt[2:ncol(All.vcf@gt)]) -colnames(All.vcf@gt[2:ncol(All.vcf@gt)]) -colnames(All.vcf@gt[2:3]) -colnames(All.vcf@gt[,2:3]) -colnames(All.vcf@gt[,2:ncol(All.vcf@gt)]) -str_match(colnames(All.vcf@gt[,2:ncol(All.vcf@gt)]), "adapter_trim[.]\\s*(.*?)\\s*[.]bam") -str_match(colnames(All.vcf@gt[,2:ncol(All.vcf@gt)]), "adapter_trim[.]\\s*(.*?)\\s*[.]bam")[,2] -colnames(All.vcf@gt[,2:ncol(All.vcf@gt)]) -# edit sample ids fown to generation-ID-treatment nu omitting adaptertrim and.bam -# now that column 1 All.vcf@gt is 'FORMAT' and must remain -colnames(All.vcf@gt[,2:ncol(All.vcf@gt)]) <- -str_match(colnames(All.vcf@gt[,2:ncol(All.vcf@gt)]), "adapter_trim[.]\\s*(.*?)\\s*[.]bam")[,2] -colnames(All.vcf@gt[,2:ncol(All.vcf@gt)]) -colnames(All.vcf@gt[,2:ncol(All.vcf@gt)]) -# edit sample ids fown to generation-ID-treatment nu omitting adaptertrim and.bam -# now that column 1 All.vcf@gt is 'FORMAT' and must remain -colnames(All.vcf@gt[,2:ncol(All.vcf@gt)]) <- str_match(colnames(All.vcf@gt[,2:ncol(All.vcf@gt)]), "adapter_trim[.]\\s*(.*?)\\s*[.]bam")[,2] -colnames(All.vcf@gt[,2:ncol(All.vcf@gt)]) -str_match(colnames(All.vcf@gt[,2:ncol(All.vcf@gt)]), "adapter_trim[.]\\s*(.*?)\\s*[.]bam")[,2] -colnames(All.vcf@gt[,2:ncol(All.vcf@gt)]) -# edit sample ids fown to generation-ID-treatment nu omitting adaptertrim and.bam -# now that column 1 All.vcf@gt is 'FORMAT' and must remain -colnames(All.vcf@gt[,2:ncol(All.vcf@gt)]) <- str_match(colnames(All.vcf@gt[,2:ncol(All.vcf@gt)]), "adapter_trim[.]\\s*(.*?)\\s*[.]bam")[,2] -colnames(All.vcf@gt[,2:ncol(All.vcf@gt)]) -str_match(colnames(All.vcf@gt[,2:ncol(All.vcf@gt)]), "adapter_trim[.]\\s*(.*?)\\s*[.]bam")[,2] -colnames(All.vcf@gt[,2:ncol(All.vcf@gt)]) <- str_match(colnames(All.vcf@gt[,2:ncol(All.vcf@gt)]), "adapter_trim[.]\\s*(.*?)\\s*[.]bam")[,2] -list -list -# edit sample ids fown to generation-ID-treatment nu omitting adaptertrim and.bam -# now that column 1 All.vcf@gt is 'FORMAT' and must remain -str_match(colnames(All.vcf@gt[,2:ncol(All.vcf@gt)]), "adapter_trim[.]\\s*(.*?)\\s*[.]bam")[,2] -# edit sample ids fown to generation-ID-treatment nu omitting adaptertrim and.bam -# now that column 1 All.vcf@gt is 'FORMAT' and must remain -(str_match(colnames(All.vcf@gt[,2:ncol(All.vcf@gt)]), "adapter_trim[.]\\s*(.*?)\\s*[.]bam")[,2]) -colnames(All.vcf@gt[,2:ncol(All.vcf@gt)]) <- (str_match(colnames(All.vcf@gt[,2:ncol(All.vcf@gt)]), "adapter_trim[.]\\s*(.*?)\\s*[.]bam")[,2]) -colnames(All.vcf@gt[,2:ncol(All.vcf@gt)]) -# edit sample ids fown to generation-ID-treatment nu omitting adaptertrim and.bam -# now that column 1 All.vcf@gt is 'FORMAT' and must remain -edit_ids_df <- as.dataframe(str_match(colnames(All.vcf@gt[,2:ncol(All.vcf@gt)]), "adapter_trim[.]\\s*(.*?)\\s*[.]bam")[,2]) -edit_ids_df -# edit sample ids fown to generation-ID-treatment nu omitting adaptertrim and.bam -# now that column 1 All.vcf@gt is 'FORMAT' and must remain -edit_ids_df <- as.data.frame(str_match(colnames(All.vcf@gt[,2:ncol(All.vcf@gt)]), "adapter_trim[.]\\s*(.*?)\\s*[.]bam")[,2]) -edit_ids_df -edit_ids_df[,1] -colnames(All.vcf@gt[,2:ncol(All.vcf@gt)]) <- edit_ids_df[,1] -colnames(All.vcf@gt[,2:ncol(All.vcf@gt)]) -colnames(All.vcf@gt[,2:ncol(All.vcf@gt)]) -edit_ids_df[,1] -All.vcf@gt -View(All.vcf@gt) -# edit sample ids fown to generation-ID-treatment nu omitting adaptertrim and.bam -# now that column 1 All.vcf@gt is 'FORMAT' and must remain -edit_ids_df <- str_match(colnames(All.vcf@gt[,2:ncol(All.vcf@gt)]), "adapter_trim[.]\\s*(.*?)\\s*[.]bam")[,2] -edit_ids_df -# F0 are 2:26 -colnames(F1.Parentage.vcf@gt[,2:26]) -# F1 juveniles are 63:139 -colnames(vcf@gt) -# F0 are 2:26 -colnames(F1.Parentage.vcf@gt[,2:26]) -# F0 are 2:26 -colnames(F1.Parentage.vcf@gt[,2:26]) -# F1 juveniles are 63:139 -colnames(vcf@gt) -# subset for F10 and F1 juveniles -# retaincolumn 1 'Format' -F1.Parentage.vcf <- vcf[,c(1:26,63:139)] -F1.Parentage.vcf -(ncol(F1.Parentage.vcf@gt)-1) -nrow(F1.Parentage) -(ncol(F1.Parentage.vcf@gt)-1) -F1.Parentage.vcf -# F0 are 2:26 -colnames(F1.Parentage.vcf@gt[,2:26]) -F1.Parentage -# F1 juveniles are 63:139 -colnames(F1.Parentage.vcf@gt[,63:139]) -# F0 are 2:26 -colnames(All.vcf@gt[,2:26]) -# F1 juveniles are 63:139 -colnames(All.vcf@gt[,63:139]) -# subset for F10 and F1 juveniles -# retaincolumn 1 'Format' -F1.Parentage.vcf <- vcf[,c(1:26,63:139)] -All.vcf@gt -colnames(All.vcf@gt) -# F1 broodstock are 27:62 -colnames(All.vcf@gt[,27:62]) -colnames(All.vcf@gt) -# F1 broodstock are 27:62 -colnames(All.vcf@gt[,27:62]) -vcf # 391 samples, 2,947 variants -colnames(All.vcf@gt) -# F2 juveniles are 178:250 -colnames(All.vcf@gt[178:250]) -# subset for F10 and F1 juveniles -# retaincolumn 1 'Format' -F2.Parentage.vcf <- vcf[,c(1,27:62,178:250)] -vcf # 391 samples, 2,947 variants -colnames(All.vcf@gt) -# subset for F10 and F1 juveniles -# retaincolumn 1 'Format' -F3.Parentage.vcf <- vcf[,c(1,140:176,251:392)] -F3.Parentage.vcf -F1.Parentage -?sequoia -?GetMaybeRel -# gff <- read.table("C:/Users/samjg/Documents/Bioinformatics/refs/Airradians/GCF_041381155.1_genomic.gff", sep="\t", quote="") -gff <- ape::read.gff("C:/Users/samjg/Documents/Bioinformatics/refs/Airradians/GCF_041381155.1_genomic.gff") %>% -dplyr::filter(type %in% 'exon') %>% # to mimix the example -dplyr::filter(!grepl("NW_",seqid)) %>% -dplyr::mutate(attributes = paste0('NAME=',(gsub('.*;product=', '', attributes))), -seqid = case_when(seqid %in% 'NC_091134.1' ~ 'CM084264.1', -seqid %in% 'NC_091135.1' ~ 'CM084265.1', -seqid %in% 'NC_091136.1' ~ 'CM084266.1', -seqid %in% 'NC_091137.1' ~ 'CM084267.1', -seqid %in% 'NC_091138.1' ~ 'CM084268.1', -seqid %in% 'NC_091139.1' ~ 'CM084269.1', -seqid %in% 'NC_091140.1' ~ 'CM084270.1', -seqid %in% 'NC_091141.1' ~ 'CM084271.1', -seqid %in% 'NC_091142.1' ~ 'CM084272.1', -seqid %in% 'NC_091143.1' ~ 'CM084273.1', -seqid %in% 'NC_091144.1' ~ 'CM084274.1', -seqid %in% 'NC_091145.1' ~ 'CM084275.1', -seqid %in% 'NC_091146.1' ~ 'CM084276.1', -seqid %in% 'NC_091147.1' ~ 'CM084277.1', -seqid %in% 'NC_091148.1' ~ 'CM084278.1', -seqid %in% 'NC_091149.1' ~ 'CM084279.1')) -gff -chrom <- create.chromR(name="chr_1", vcf=vcf, seq=dna_chroms, ann=gff, verbose=FALSE) -chrom@vcf -plot(chrom) -chromoqc(chrom) -chrom <- create.chromR(name="chr_2", vcf=vcf, seq=dna_chroms, ann=gff, verbose=FALSE) -chrom@vcf -chrom <- create.chromR(name="chr_2", vcf=All.vcf, seq=dna_chroms, ann=gff, verbose=FALSE) -chrom -chrom <- create.chromR(name="CM084265.1", vcf=All.vcf, seq=dna_chroms, ann=gff, verbose=FALSE) -chrom@vcf -chrom -All.vcf@meta -dna <- ape::read.dna("C:/Users/samjg/Documents/Bioinformatics/refs/Airradians/GCF_041381155.1_Ai_NY_genomic.fna", -format = "fasta") -dna_chroms <- (dna)[1:16] -names(dna_chroms) <- c('CM084264.1', 'CM084265.1', 'CM084266.1', 'CM084267.1', -'CM084268.1', 'CM084269.1', 'CM084270.1', 'CM084271.1', -'CM084272.1', 'CM084273.1', 'CM084274.1', 'CM084275.1', -'CM084276.1', 'CM084277.1', 'CM084278.1', 'CM084279.1') -dna_chroms -gff -chrom <- create.chromR(name="CM084265.1", vcf=All.vcf, seq=dna_chroms, ann=gff, verbose=FALSE) -All.vcf -All.vcf@gt -All.vcf@meta -All.vcf@meta[11] -All.vcf(All.vcf@meta[11]) -All.vcf@meta[11](All.vcf) -All.vcf@meta[11] -All.vcf -knitr::opts_chunk$set(echo = TRUE) -# SET WORKING DIRECTORY -knitr::opts_knit$set(root.dir = "C:/Users/samjg/Documents/Github_repositories/EAD-ASEB-Airradians_Popgen_OA/") # Sam's -#knitr::opts_knit$set(root.dir = "C:/Users/samuel.gurr/Documents/Github_repositories/EAD-ASEB-Airradians_Popgen_OA/") # Sam's -library(tidyverse) -library(sequoia) -library(vcfR) -F1.Parentage <- read.csv(paste0(getwd(),"/RAnalysis/Data/Popgen/Parentages/F1_parentage.csv"), -sep = ',', -head = T) -F2.Parentage <- read.csv(paste0(getwd(),"/RAnalysis/Data/Popgen/Parentages/F2_parentage.csv"), -sep = ',', -head = T) -F3.Parentage <- read.csv(paste0(getwd(),"/RAnalysis/Data/Popgen/Parentages/F3_parentage.csv"), -sep = ',', -head = T) -?akcPairLL -?CalcPairLL -All.vcf <- vcfR::read.vcfR(here::here(getwd(), -"RAnalysis", -"Data", -"Popgen", -"03_prune", -"out.7.phased.vcf.gz"), verbose = FALSE) -?CheckGeno -CheckGeno( -GenoM = All.vcf, -quiet = FALSE, # print messages please -Plot = TRUE # get the plots +randomSNPs <- array(sample(c(sample(1:ncol(F0BF1J.matrix), 20, replace = TRUE)))) +bootstrap_GenoM <- F0BF1J.matrix[,randomSNPs] +F0BF1J.bootstrap.sequoia <- sequoia( +GenoM = bootstrap_GenoM, +LifeHistData = F0BF1J.LifeHistData.editted, #F0BF1J.LifeHistData, +SeqList = NULL, +# most comp intensive, run everything +Module = "par", +Err = 1e-04, +# threshold for log 10 likelihood (LLR) between a proposed relationship versus unrelated +Tfilter = -2, +# minimum LLR required for acceptance of proposed relationship relative to the next most likely +Tassign = 0.5, +# MaxSibshipSize = 100, +# breeding system complexity +Complex = "full", +Herm = "A", +UseAge = "extra", +CalcLLR = TRUE ) -All.vcf -All.vcf_matrix <- as.matrix(All.vcf) -# genind -All.vcf_gen <- All.vcf %>% vcfR2genind() -All.vcf_matrix <- as.matrix(All.vcf_gen) -CheckGeno( -GenoM = All.vcf_matrix, -quiet = FALSE, # print messages please -Plot = TRUE # get the plots +randomSNPs <- array(sample(c(sample(1:ncol(F0BF1J.matrix), 25, replace = TRUE)))) +bootstrap_GenoM <- F0BF1J.matrix[,randomSNPs] +F0BF1J.bootstrap.sequoia <- sequoia( +GenoM = bootstrap_GenoM, +LifeHistData = F0BF1J.LifeHistData.editted, #F0BF1J.LifeHistData, +SeqList = NULL, +# most comp intensive, run everything +Module = "par", +Err = 1e-04, +# threshold for log 10 likelihood (LLR) between a proposed relationship versus unrelated +Tfilter = -2, +# minimum LLR required for acceptance of proposed relationship relative to the next most likely +Tassign = 0.5, +# MaxSibshipSize = 100, +# breeding system complexity +Complex = "full", +Herm = "A", +UseAge = "extra", +CalcLLR = TRUE ) -CheckGeno( -GenoM = All.vcf_matrix, -quiet = FALSE, # print messages please -Plot = TRUE, # get the plots -Return = "GenoM", -Strict = TRUE +randomSNPs <- array(sample(c(sample(1:ncol(F0BF1J.matrix), 25, replace = TRUE)))) +bootstrap_GenoM <- F0BF1J.matrix[,randomSNPs] +F0BF1J.bootstrap.sequoia <- sequoia( +GenoM = bootstrap_GenoM, +LifeHistData = F0BF1J.LifeHistData.editted, #F0BF1J.LifeHistData, +SeqList = NULL, +# most comp intensive, run everything +Module = "par", +Err = 1e-04, +# threshold for log 10 likelihood (LLR) between a proposed relationship versus unrelated +Tfilter = -2, +# minimum LLR required for acceptance of proposed relationship relative to the next most likely +Tassign = 0.5, +# MaxSibshipSize = 100, +# breeding system complexity +Complex = "full", +Herm = "A", +UseAge = "extra", +CalcLLR = TRUE ) -CheckGeno( -GenoM = All.vcf_matrix, -quiet = FALSE, # print messages please -Plot = TRUE, # get the plots -Return = "GenoM", -Strict = TRUE +randomSNPs <- array(sample(c(sample(1:ncol(F0BF1J.matrix), 25, replace = TRUE)))) +bootstrap_GenoM <- F0BF1J.matrix[,randomSNPs] +F0BF1J.bootstrap.sequoia <- sequoia( +GenoM = bootstrap_GenoM, +LifeHistData = F0BF1J.LifeHistData.editted, #F0BF1J.LifeHistData, +SeqList = NULL, +# most comp intensive, run everything +Module = "par", +Err = 1e-04, +# threshold for log 10 likelihood (LLR) between a proposed relationship versus unrelated +Tfilter = -2, +# minimum LLR required for acceptance of proposed relationship relative to the next most likely +Tassign = 0.5, +# MaxSibshipSize = 100, +# breeding system complexity +Complex = "full", +Herm = "A", +UseAge = "extra", +CalcLLR = TRUE ) -# list of excluded SNPs and individuals using excl -CheckGeno( -GenoM = All.vcf_matrix, -quiet = FALSE, # print messages please -Plot = TRUE, # get the plots -Return = "excl", -Strict = TRUE +randomSNPs <- array(sample(c(sample(1:ncol(F0BF1J.matrix), 50, replace = TRUE)))) +bootstrap_GenoM <- F0BF1J.matrix[,randomSNPs] +F0BF1J.bootstrap.sequoia <- sequoia( +GenoM = bootstrap_GenoM, +LifeHistData = F0BF1J.LifeHistData.editted, #F0BF1J.LifeHistData, +SeqList = NULL, +# most comp intensive, run everything +Module = "par", +Err = 1e-04, +# threshold for log 10 likelihood (LLR) between a proposed relationship versus unrelated +Tfilter = -2, +# minimum LLR required for acceptance of proposed relationship relative to the next most likely +Tassign = 0.5, +# MaxSibshipSize = 100, +# breeding system complexity +Complex = "full", +Herm = "A", +UseAge = "extra", +CalcLLR = TRUE ) -# cleaned genotype matrix using GenoM -CheckGeno( -GenoM = All.vcf_matrix, -quiet = TRUE, # print messages please -Plot = FALSE, # get the plots -Return = "GenoM", -Strict = TRUE +randomSNPs <- array(sample(c(sample(1:ncol(F0BF1J.matrix), 50, replace = TRUE)))) +bootstrap_GenoM <- F0BF1J.matrix[,randomSNPs] +F0BF1J.bootstrap.sequoia <- sequoia( +GenoM = bootstrap_GenoM, +LifeHistData = F0BF1J.LifeHistData.editted, #F0BF1J.LifeHistData, +SeqList = NULL, +# most comp intensive, run everything +Module = "par", +Err = 1e-04, +# threshold for log 10 likelihood (LLR) between a proposed relationship versus unrelated +Tfilter = -1, +# minimum LLR required for acceptance of proposed relationship relative to the next most likely +Tassign = 0.5, +# MaxSibshipSize = 100, +# breeding system complexity +Complex = "full", +Herm = "A", +UseAge = "extra", +CalcLLR = TRUE ) -# list of excluded SNPs and individuals using excl -Excl <- CheckGeno( -GenoM = All.vcf_matrix, -quiet = FALSE, # print messages please -Plot = TRUE, # get the plots -Return = "excl", -Strict = TRUE +randomSNPs <- array(sample(c(sample(1:ncol(F0BF1J.matrix), 50, replace = TRUE)))) +bootstrap_GenoM <- F0BF1J.matrix[,randomSNPs] +F0BF1J.bootstrap.sequoia <- sequoia( +GenoM = bootstrap_GenoM, +LifeHistData = F0BF1J.LifeHistData.editted, #F0BF1J.LifeHistData, +SeqList = NULL, +# most comp intensive, run everything +Module = "par", +Err = 1e-04, +# threshold for log 10 likelihood (LLR) between a proposed relationship versus unrelated +Tfilter = -0.2, +# minimum LLR required for acceptance of proposed relationship relative to the next most likely +Tassign = 0.5, +# MaxSibshipSize = 100, +# breeding system complexity +Complex = "full", +Herm = "A", +UseAge = "extra", +CalcLLR = TRUE ) -Excl -# list of excluded SNPs and individuals using excl -Excl <- CheckGeno( -GenoM = All.vcf_matrix, -# quiet = FALSE, # print messages please -# Plot = TRUE, # get the plots -Return = "excl" -# Strict = TRUE +randomSNPs <- array(sample(c(sample(1:ncol(F0BF1J.matrix), 50, replace = TRUE)))) +bootstrap_GenoM <- F0BF1J.matrix[,randomSNPs] +F0BF1J.bootstrap.sequoia <- sequoia( +GenoM = bootstrap_GenoM, +LifeHistData = F0BF1J.LifeHistData.editted, #F0BF1J.LifeHistData, +SeqList = NULL, +# most comp intensive, run everything +Module = "par", +Err = 1e-04, +# threshold for log 10 likelihood (LLR) between a proposed relationship versus unrelated +Tfilter = -0.2, +# minimum LLR required for acceptance of proposed relationship relative to the next most likely +Tassign = 0.5, +# MaxSibshipSize = 100, +# breeding system complexity +Complex = "full", +Herm = "A", +UseAge = "extra", +CalcLLR = TRUE ) -Excl -names(Excl) -All.vcf_matrix -All.vcf_gen -?CheckGeno # about this call -GenoM.checked <- CheckGeno(All.vcf_matrix, Return="GenoM") -GenoM.checked -# cleaned genotype matrix using GenoM -GenoM.checked <- CheckGeno( -GenoM = All.vcf_matrix, -quiet = TRUE, # print messages please -Plot = FALSE, # get the plots -Return = "GenoM", -Strict = TRUE +F0BF1J.bootstrap.sequoia <- sequoia( +GenoM = bootstrap_GenoM, +LifeHistData = F0BF1J.LifeHistData.editted, #F0BF1J.LifeHistData, +SeqList = NULL, +# most comp intensive, run everything +Module = "par", +Err = 1e-04, +# threshold for log 10 likelihood (LLR) between a proposed relationship versus unrelated +Tfilter = -5, +# minimum LLR required for acceptance of proposed relationship relative to the next most likely +Tassign = 0.5, +# MaxSibshipSize = 100, +# breeding system complexity +Complex = "full", +Herm = "A", +UseAge = "extra", +CalcLLR = TRUE ) -GenoM.checked -# cleaned genotype matrix using GenoM -CheckGeno(All.vcf_matrix, Return="GenoM") -# cleaned genotype matrix using GenoM -GenoM.checked <- CheckGeno(All.vcf_matrix, Return="GenoM") -?CalcPairLL #pairwise relationship liklihoods -Pairwise_df <- as.data.frame(ncol = 4) -?as.data.frame -All.vcf@gt -All.vcf@gt[,2:length(colnames(All.vcf@gt))]) -colnames(All.vcf@gt) -length(colnames(All.vcf@gt)) -All.vcf@gt[,2:length(colnames(All.vcf@gt))] -All.vcf@gt[2:length(colnames(All.vcf@gt)),] -colnames(All.vcf@gt[2:length(colnames(All.vcf@gt))]) -colnames(All.vcf@gt[,2:length(colnames(All.vcf@gt))]) -All.vcf_listIDs <- colnames(All.vcf@gt[,2:length(colnames(All.vcf@gt))]) -as.data.frame(All.vcf_listIDs, All.vcf_listIDs) -colnames(as.data.frame(All.vcf_listIDs, All.vcf_listIDs) ) -as.data.frame(All.vcf_listIDs, All.vcf_listIDs) -colnames(data.frame(All.vcf_listIDs, All.vcf_listIDs)) -colnames(data.frame(All.vcf_listIDs, All.vcf_listIDs)) %>% -dplyr::rename(All.vcf_listIDs = Ids) -colnames(data.frame(All.vcf_listIDs, All.vcf_listIDs)) %>% -dplyr::rename(Ids = All.vcf_listIDs) -colnames(data.frame(All.vcf_listIDs, All.vcf_listIDs)) %>% -rename(Ids = All.vcf_listIDs) -data.frame(All.vcf_listIDs, All.vcf_listIDs) %>% -rename(Ids = All.vcf_listIDs) -data.frame(All.vcf_listIDs, All.vcf_listIDs) %>% -rename(Ids = All.vcf_listIDs, -Ids_dup = All.vcf_listIDs) %>% -dplyr::distinct() -data.frame(All.vcf_listIDs, All.vcf_listIDs) %>% -rename(Ids = All.vcf_listIDs, -Ids_dup = All.vcf_listIDs) %>% -dplyr::distinct(Ids, Ids_dup) -data.frame(All.vcf_listIDs, All.vcf_listIDs) %>% -rename(Ids = All.vcf_listIDs, -Ids_dup = All.vcf_listIDs) -data.frame(All.vcf_listIDs, All.vcf_listIDs) %>% -rename(Ids = All.vcf_listIDs, -Ids_dup = All.vcf_listIDs.1) %>% -dplyr::distinct(Ids, Ids_dup) -data <- data.frame(All.vcf_listIDs, All.vcf_listIDs) %>% -rename(Ids = All.vcf_listIDs, -Ids_dup = All.vcf_listIDs.1) %>% -group_by(Ids) %>% -summarise(Ids_dup = t(combn(coIds_dupl2, 2))) -data <- data.frame(All.vcf_listIDs, All.vcf_listIDs) %>% -rename(Ids = All.vcf_listIDs, -Ids_dup = All.vcf_listIDs.1) %>% -group_by(Ids) %>% -summarise(Ids_dup = t(combn(Ids_dupl2, 2))) -data <- data.frame(All.vcf_listIDs, All.vcf_listIDs) %>% -rename(Ids = All.vcf_listIDs, -Ids_dup = All.vcf_listIDs.1) %>% -group_by(Ids) %>% -summarise(Ids_dup = t(combn(Ids_dup, 2))) -data.frame(All.vcf_listIDs, All.vcf_listIDs) %>% -rename(Ids = All.vcf_listIDs, -Ids_dup = All.vcf_listIDs.1) %>% -group_by(Ids) -get_permutations <- function(df){ -perm <- permutations(nrow(unique(df[,1])), 2, df$variables) -as.data.table(perm) +F0BF1J.bootstrap.sequoia <- sequoia( +GenoM = bootstrap_GenoM, +LifeHistData = F0BF1J.LifeHistData.editted, #F0BF1J.LifeHistData, +SeqList = NULL, +# most comp intensive, run everything +Module = "par", +Err = 1e-04, +# threshold for log 10 likelihood (LLR) between a proposed relationship versus unrelated +Tfilter = -10, +# minimum LLR required for acceptance of proposed relationship relative to the next most likely +Tassign = 0.5, +# MaxSibshipSize = 100, +# breeding system complexity +Complex = "full", +Herm = "A", +UseAge = "extra", +CalcLLR = TRUE +) +F0BF1J.bootstrap.sequoia <- sequoia( +GenoM = bootstrap_GenoM, +LifeHistData = F0BF1J.LifeHistData.editted, #F0BF1J.LifeHistData, +SeqList = NULL, +# most comp intensive, run everything +Module = "par", +Err = 1e-04, +# threshold for log 10 likelihood (LLR) between a proposed relationship versus unrelated +Tfilter = -5, +# minimum LLR required for acceptance of proposed relationship relative to the next most likely +Tassign = 0.1, +# MaxSibshipSize = 100, +# breeding system complexity +Complex = "full", +Herm = "A", +UseAge = "extra", +CalcLLR = TRUE +) +F0BF1J.bootstrap.sequoia <- sequoia( +GenoM = bootstrap_GenoM, +LifeHistData = F0BF1J.LifeHistData.editted, #F0BF1J.LifeHistData, +SeqList = NULL, +# most comp intensive, run everything +Module = "par", +Err = 1e-04, +# threshold for log 10 likelihood (LLR) between a proposed relationship versus unrelated +Tfilter = -5, +# minimum LLR required for acceptance of proposed relationship relative to the next most likely +Tassign = 0.2, +# MaxSibshipSize = 100, +# breeding system complexity +Complex = "full", +Herm = "A", +UseAge = "extra", +CalcLLR = TRUE +) +randomSNPs <- array(sample(c(sample(1:ncol(F0BF1J.matrix), 50, replace = TRUE)))) +bootstrap_GenoM <- F0BF1J.matrix[,randomSNPs] +F0BF1J.bootstrap.sequoia <- sequoia( +GenoM = bootstrap_GenoM, +LifeHistData = F0BF1J.LifeHistData.editted, #F0BF1J.LifeHistData, +SeqList = NULL, +# most comp intensive, run everything +Module = "par", +Err = 1e-04, +# threshold for log 10 likelihood (LLR) between a proposed relationship versus unrelated +Tfilter = -5, +# minimum LLR required for acceptance of proposed relationship relative to the next most likely +Tassign = 0.2, +# MaxSibshipSize = 100, +# breeding system complexity +Complex = "full", +Herm = "A", +UseAge = "extra", +CalcLLR = TRUE +) +F0BF1J.bootstrap.sequoia <- sequoia( +GenoM = bootstrap_GenoM, +LifeHistData = F0BF1J.LifeHistData.editted, #F0BF1J.LifeHistData, +SeqList = NULL, +# most comp intensive, run everything +Module = "par", +Err = 1e-04, +# threshold for log 10 likelihood (LLR) between a proposed relationship versus unrelated +Tfilter = -2, +# minimum LLR required for acceptance of proposed relationship relative to the next most likely +Tassign = 0.2, +# MaxSibshipSize = 100, +# breeding system complexity +Complex = "full", +Herm = "A", +UseAge = "extra", +CalcLLR = TRUE +) +randomSNPs <- array(sample(c(sample(1:ncol(F0BF1J.matrix), 50, replace = TRUE)))) +bootstrap_GenoM <- F0BF1J.matrix[,randomSNPs] +F0BF1J.bootstrap.sequoia <- sequoia( +GenoM = bootstrap_GenoM, +LifeHistData = F0BF1J.LifeHistData.editted, #F0BF1J.LifeHistData, +SeqList = NULL, +# most comp intensive, run everything +Module = "par", +Err = 1e-04, +# threshold for log 10 likelihood (LLR) between a proposed relationship versus unrelated +Tfilter = -2, +# minimum LLR required for acceptance of proposed relationship relative to the next most likely +Tassign = 0.2, +# MaxSibshipSize = 100, +# breeding system complexity +Complex = "full", +Herm = "A", +UseAge = "extra", +CalcLLR = TRUE +) +test2 <- F0BF1J.bootstrap.sequoia$PedigreePar %>% select(id, dam, LLRdam, sire, LLRsire) %>% na.omit() +test2 +# Call the cumulative dataframe that we will write to in the for loop below +df_total <- data.frame() # start dataframe +pedigree.table <- data.frame(matrix(nrow = 1, ncol = 7)) # create dataframe to save cumunalitively during for loop +colnames(pedigree.table) <- c('id', 'dam', 'LLRdam', 'sire' , 'LLRsire') # names for comuns in the for loop +# Call the cumulative dataframe that we will write to in the for loop below +df_total <- data.frame() # start dataframe +pedigree.table <- data.frame(matrix(nrow = 1, ncol = 6)) # create dataframe to save cumunalitively during for loop +colnames(pedigree.table) <- c('id', 'dam', 'LLRdam', 'sire' , 'LLRsire') # names for comuns in the for loop +for (i in 1:100) { +randomSNPs[i] <- array(sample(c(sample(1:ncol(F0BF1J.matrix), 50, replace = TRUE)))) +bootstrap_GenoM <- F0BF1J.matrix[,randomSNPs[i]] +F0BF1J.bootstrap.sequoia <- sequoia( +GenoM = bootstrap_GenoM, +LifeHistData = F0BF1J.LifeHistData.editted, #F0BF1J.LifeHistData, +SeqList = NULL, +# most comp intensive, run everything +Module = "par", +Err = 1e-04, +# threshold for log 10 likelihood (LLR) between a proposed relationship versus unrelated +Tfilter = -2, +# minimum LLR required for acceptance of proposed relationship relative to the next most likely +Tassign = 0.2, +# MaxSibshipSize = 100, +# breeding system complexity +Complex = "full", +Herm = "A", +UseAge = "extra", +CalcLLR = TRUE +) +pedigree_data <- data.frame(F0BF1J.bootstrap.sequoia$PedigreePar %>% select(id, dam, LLRdam, sire, LLRsire) %>% na.omit()) +df_total <- rbind(df_total,pedigree_data) #bind to a cumulative list dataframe +print(df_total) # print to monitor progress } -data <- data.frame(All.vcf_listIDs, All.vcf_listIDs) -ds <- data[, get_permutations(.SD), by = indices] -All.vcf_listIDs <- colnames(All.vcf@gt[,2:length(colnames(All.vcf@gt))]) -All.vcf_listIDs -data.frame(All.vcf_listIDs) %>% -dplyr::rename(ID1 = All.vcf_listIDs) %>% -tidyr::expand(ID1) -All.vcf_listIDs -data.frame(All.vcf_listIDs) -data.frame(All.vcf_listIDs) %>% -dplyr::rename(ID1 = All.vcf_listIDs) -data.frame(All.vcf_listIDs) %>% -dplyr::rename(ID1 = All.vcf_listIDs) %>% -dplyr::mutate(ID2 = ID1) %>% -tidyr::expand(ID1, ID2) -All.vcf_IDs_df <- data.frame(All.vcf_listIDs) %>% -dplyr::rename(ID1 = All.vcf_listIDs) %>% -dplyr::mutate(ID2 = ID1) %>% -tidyr::expand(ID1, ID2) -All.vcf_pairs <- data.frame(All.vcf_listIDs) %>% -dplyr::rename(ID1 = All.vcf_listIDs) %>% # rename -dplyr::mutate(ID2 = ID1) %>% # duplicate -tidyr::expand(ID1, ID2) # get all possible ocmbinations -All.vcf_unique.pairs <- All.vcf_pairs[All.vcf_pairs$ID1 != All.vcf_pairs$ID2,] -All.vcf_unique.pairs -All.vcf_pairs_df <- data.frame(All.vcf_listIDs) %>% -dplyr::rename(ID1 = All.vcf_listIDs) %>% # rename +randomSNPs[[1]] <- array(sample(c(sample(1:ncol(F0BF1J.matrix), 50, replace = TRUE)))) +randomSNPs_[`1`] <- array(sample(c(sample(1:ncol(F0BF1J.matrix), 50, replace = TRUE)))) +randomSNPs_[1] <- array(sample(c(sample(1:ncol(F0BF1J.matrix), 50, replace = TRUE)))) +randomSNPs_`1` <- array(sample(c(sample(1:ncol(F0BF1J.matrix), 50, replace = TRUE)))) +randomSNPs_1 <- array(sample(c(sample(1:ncol(F0BF1J.matrix), 50, replace = TRUE)))) +randomSNPs <- array(sample(c(sample(1:ncol(F0BF1J.matrix), 50, replace = TRUE)))) +randomSNPs +for (i in 1:100) { +x <- (50+i) - i # assign i to 50, # randomSNPs == 50 - repeat 100 times (for loop) +randomSNPs <- array(sample(c(sample(1:ncol(F0BF1J.matrix), x, replace = TRUE)))) +bootstrap_GenoM <- F0BF1J.matrix[,randomSNPs[i]] +F0BF1J.bootstrap.sequoia <- sequoia( +GenoM = bootstrap_GenoM, +LifeHistData = F0BF1J.LifeHistData.editted, #F0BF1J.LifeHistData, +SeqList = NULL, +# most comp intensive, run everything +Module = "par", +Err = 1e-04, +# threshold for log 10 likelihood (LLR) between a proposed relationship versus unrelated +Tfilter = -2, +# minimum LLR required for acceptance of proposed relationship relative to the next most likely +Tassign = 0.2, +# MaxSibshipSize = 100, +# breeding system complexity +Complex = "full", +Herm = "A", +UseAge = "extra", +CalcLLR = TRUE +) +pedigree_data <- data.frame(F0BF1J.bootstrap.sequoia$PedigreePar %>% select(id, dam, LLRdam, sire, LLRsire) %>% na.omit()) +df_total <- rbind(df_total,pedigree_data) #bind to a cumulative list dataframe +print(df_total) # print to monitor progress +} +# Call the cumulative dataframe that we will write to in the for loop below +df_total <- data.frame() # start dataframe +for (i in 1:100) { +x <- (50+i) - i # assign i to 50, # randomSNPs == 50 - repeat 100 times (for loop) +randomSNPs <- array(sample(c(sample(1:ncol(F0BF1J.matrix), x, replace = TRUE)))) +bootstrap_GenoM <- F0BF1J.matrix[,randomSNPs] +F0BF1J.bootstrap.sequoia <- sequoia( +GenoM = bootstrap_GenoM, +LifeHistData = F0BF1J.LifeHistData.editted, #F0BF1J.LifeHistData, +SeqList = NULL, +# most comp intensive, run everything +Module = "par", +Err = 1e-04, +# threshold for log 10 likelihood (LLR) between a proposed relationship versus unrelated +Tfilter = -2, +# minimum LLR required for acceptance of proposed relationship relative to the next most likely +Tassign = 0.2, +# MaxSibshipSize = 100, +# breeding system complexity +Complex = "full", +Herm = "A", +UseAge = "extra", +CalcLLR = TRUE +) +pedigree_data <- data.frame(F0BF1J.bootstrap.sequoia$PedigreePar %>% select(id, dam, LLRdam, sire, LLRsire) %>% na.omit()) +df_total <- rbind(df_total,pedigree_data) #bind to a cumulative list dataframe +print(df_total) # print to monitor progress +} +df_total +# were we able to capture at least one pedigree for each of the F1 offspring? +length(colnames(All.vcf@gt[,63:139])) # number of F1 juvniles in the vcf /genind/ genoM matrix +length(unique(df_total$id)) +df_total +# get the est fit model +# The larger the absolute value of the LLR, the stronger the evidence for the preferred model +df_total$absLLRtotal <- abs(df_total$LLRdam) + abs(df_total$LLRsire) +df_total +df_total.byLLR <- df_total[,.SD[which.max(absLLRtotal)],by=id] +df_total +df_total.byLLR <- df_total %>% group_by(id) %>% dplyr::top_n(1, absLLRtotal) +df_total.byLLR +df_total.byLLR +pedigree_data <- df_total +# get the est fit model +# The larger the absolute value of the LLR, the stronger the evidence for the preferred model +pedigree_data$absLLRtotal <- abs(pedigree_data$LLRdam) + abs(pedigree_data$LLRsire) +pedigree_data.byLRRtotal <- pedigree_data %>% +group_by(id) %>% +dplyr::top_n(1, absLLRtotal) +pedigree_data.byLRRtotal +F0BF1J.pedigree <- pedigree_data %>% +group_by(id) %>% # group by id - there are mutliple occurances of pedigree assign for ids! +dplyr::top_n(1, absLLRtotal) # take the best hit essentiall, highest LLR total +F0BF1J.pedigree <- pedigree_data %>% +group_by(id) %>% # group by id - there are mutliple occurances of pedigree assign for ids! +dplyr::top_n(1, absLLRtotal) %>% # take the best hit essentiall, highest LLR total +dplyr::select(id, dam, sire) # select the target columns for next sequoia run +F0BF1J.pedigree +# Pairs - dataframe with columns ID1 and ID2 containing all possible combinations +F0BF1J.Pairs_raw <- data.frame(F0BF1J.ListIDs) %>% +dplyr::rename(ID1 = F0BF1J.ListIDs) %>% # rename dplyr::mutate(ID2 = ID1) %>% # duplicate -tidyr::expand(ID1, ID2) # get all possible ocmbinations -Pairwise_scallop <- All.vcf_pairs[All.vcf_pairs$ID1 != All.vcf_pairs$ID2,] -Pairwise_scallop <- All.vcf_pairs_df[All.vcf_pairs_df$ID1 != All.vcf_pairs_df$ID2,] -Pairwise_scallop <- All.vcf_pairs_df[All.vcf_pairs_df$ID1 != All.vcf_pairs_df$ID2,] -Pairwise_scallop -All.vcf@gt -# edit sample ids fown to generation-ID-treatment nu omitting adaptertrim and.bam -# now that column 1 All.vcf@gt is 'FORMAT' and must remain -edit_ids_df <- str_match(colnames(All.vcf@gt[,2:ncol(All.vcf@gt)]), "adapter_trim[.]\\s*(.*?)\\s*[.]bam")[,2] -edit_ids_df -# -colnames(All.vcf@gt[,2:ncol(All.vcf@gt)]) <- edit_ids_df[,1] -edit_ids_df[,1] -# edit sample ids fown to generation-ID-treatment nu omitting adaptertrim and.bam -# now that column 1 All.vcf@gt is 'FORMAT' and must remain -edit_ids_df <- str_match(colnames(All.vcf@gt[,2:ncol(All.vcf@gt)]), "adapter_trim[.]\\s*(.*?)\\s*[.]bam")[,2] -edit_ids_df -edit_ids_df[1] -edit_ids_df[1,] -# edit sample ids fown to generation-ID-treatment nu omitting adaptertrim and.bam -# now that column 1 All.vcf@gt is 'FORMAT' and must remain -edit_ids_df <- data.frame(str_match(colnames(All.vcf@gt[,2:ncol(All.vcf@gt)]), "adapter_trim[.]\\s*(.*?)\\s*[.]bam")[,2]) -edit_ids_df -edit_ids_df[1,] -edit_ids_df[,1] -colnames(All.vcf@gt[,2:ncol(All.vcf@gt)]) -edit_ids_df[,1] -# -colnames(All.vcf@gt[,2:ncol(All.vcf@gt)]) <- edit_ids_df[,1] -All.vcf@gt -typeof)All.vcf@gt) -typeof(All.vcf@gt) -All.vcf@gt -All.vcf@gt[,2:ncol(All.vcf@gt)] -All.vcf@gt -All.vcf@gt[,2:ncol(All.vcf@gt)] -typeof(All.vcf@gt) -colnames(All.vcf@gt[,2:ncol(All.vcf@gt)]) -names(All.vcf@gt[,2:ncol(All.vcf@gt)]) -(All.vcf@gt[,2:ncol(All.vcf@gt)]) -(All.vcf@gt[,2:ncol(All.vcf@gt)])[1] -(All.vcf@gt[,2:ncol(All.vcf@gt)])[,-1] -(All.vcf@gt[,2:ncol(All.vcf@gt)])[,1] -(All.vcf@gt[,2:ncol(All.vcf@gt)])[,-1] -colnames(All.vcf@gt[,2:ncol(All.vcf@gt)]) -edit_ids_df[,1] -?CalcPairLL #pairwise relationship liklihoods -ID1 -All.vcf_pairs_df$ID1 -Pairwise_scallop -# Pedigree -Pedigree_scallop <- -Pedigree_scallop_F1 <- read.csv(paste0(getwd(),"/RAnalysis/Data/Popgen/Parentages/F1_parentage.csv"), sep = ',', head = T) -Pedigree_scallop_F1 -Pedigree_scallop_F1 +tidyr::expand(ID1, ID2) %>% # get all possible ocmbinations +dplyr::mutate(AgeDif = case_when( +# ID1 and ID2 are F0 broodstock +(grepl("F0", ID1, ignore.case = TRUE) & +grepl("F0", ID2, ignore.case = TRUE)) ~ 0, +# ID1 and ID2 are F1 Juveniles +(!grepl("F0", ID1, ignore.case = TRUE) & +!grepl("F0", ID2, ignore.case = TRUE)) ~ 0, +# ID1 is F1 juvenile and ID2 is F0 broodstock +(!grepl("F0", ID1, ignore.case = TRUE) & +grepl("F0", ID2, ignore.case = TRUE)) ~ 1, +# IF1 is F0 broodstock and ID2 is F1 juvenile +(grepl("F0", ID1, ignore.case = TRUE) & +!grepl("F0", ID2, ignore.case = TRUE)) ~ -1, +)) +F0BF1J.Pairs <- F0BF1J.Pairs_raw[F0BF1J.Pairs_raw$ID1 != F0BF1J.Pairs_raw$ID2,] +# RUN IT! +CalcPairLL( +Pairs = F0BF1J.Pairs, +GenoM = F0BF1J.matrix, +Pedigree = F0BF1J.pedigree, +LifeHistData = F0BF1J.LifeHistData.editted, # working on it +AgePrior = TRUE, # working on it +SeqList = NULL, +Complex = "full", +Herm = "A", # "A" (distinguish between dam and sire role, default if at least 1 individual with sex=4), or "B" (no distinction between dam and sire role). +Err = 1e-04, +ErrFlavour = "version2.9", +Tassign = 0.5, +Tfilter = -2, +quiet = FALSE, +Plot = TRUE +) +F0BF1J.pedigree +F0BF1J.matrix +F0BF1J.Pairs +F0BF1J.LifeHistData.editted +# RUN IT! +CalcPairLL( +Pairs = F0BF1J.Pairs, +GenoM = F0BF1J.matrix, +Pedigree = F0BF1J.pedigree, +LifeHistData = F0BF1J.LifeHistData.editted, # working on it +AgePrior = TRUE, # working on it +SeqList = NULL, +Complex = "full", +Herm = "A", # "A" (distinguish between dam and sire role, default if at least 1 individual with sex=4), or "B" (no distinction between dam and sire role). +Err = 1e-04, +ErrFlavour = "version2.9", +Tassign = 0.5, +Tfilter = -2, +quiet = FALSE, +Plot = TRUE +) +class(F0BF1J.pedigree) +class(as.data.frame(F0BF1J.pedigree)) +CalcPairLL( +Pairs = F0BF1J.Pairs, +GenoM = F0BF1J.matrix, +Pedigree = as.data.frame(F0BF1J.pedigree), +LifeHistData = F0BF1J.LifeHistData.editted, # working on it +AgePrior = TRUE, # working on it +SeqList = NULL, +Complex = "full", +Herm = "A", # "A" (distinguish between dam and sire role, default if at least 1 individual with sex=4), or "B" (no distinction between dam and sire role). +Err = 1e-04, +ErrFlavour = "version2.9", +Tassign = 0.5, +Tfilter = -2, +quiet = FALSE, +Plot = TRUE +) +# view cl names to know what to subset by +colnames(All.vcf@gt) +# F3 juveniles are 178:250 +colnames(All.vcf@gt[,251:393]) # third generation of juveniles (offpsring of pH-specific parents, grandchildren of F1 pH parents, great graandchildren of F0) +# F3 juveniles are 178:250 +colnames(All.vcf@gt[,251:393]) # third generation of juveniles (offpsring of pH-specific parents, grandchildren of F1 pH parents, great graandchildren of F0) +# view cl names to know what to subset by +colnames(All.vcf@gt) +# F3 juveniles are 178:250 +colnames(All.vcf@gt[,251:392]) # third generation of juveniles (offpsring of pH-specific parents, grandchildren of F1 pH parents, great graandchildren of F0) +# view cl names to know what to subset by +colnames(All.vcf@gt) +# F1 broodstock 27:62 +colnames(All.vcf@gt[,27:62]) +# view cl names to know what to subset by +colnames(All.vcf@gt) +# F2 broodstock +colnames(All.vcf@gt[,140:177]) +F0BF1JF1BF2J.vcf <- All.vcf[,c(1:26,63:139,178:250, 27:62])] # now 175 samples! +F0BF1JF1BF2J.vcf <- All.vcf[,c(1:26,63:139,178:250,27:62])] # now 175 samples! diff --git a/RAnalysis/Scripts/Popgen/05_parentage.Rmd b/RAnalysis/Scripts/Popgen/05_parentage.Rmd index c5c39f9..a2d25b6 100644 --- a/RAnalysis/Scripts/Popgen/05_parentage.Rmd +++ b/RAnalysis/Scripts/Popgen/05_parentage.Rmd @@ -8,7 +8,6 @@ knitr::opts_chunk$set(echo = TRUE) # SET WORKING DIRECTORY knitr::opts_knit$set(root.dir = "C:/Users/samjg/Documents/Github_repositories/EAD-ASEB-Airradians_Popgen_OA/") # Sam's #knitr::opts_knit$set(root.dir = "C:/Users/samuel.gurr/Documents/Github_repositories/EAD-ASEB-Airradians_Popgen_OA/") # Sam's - ``` ## load libraries @@ -22,11 +21,97 @@ library(vcfR) ### load parentage csv files ```{r read parentage csv files} -F1.Parentage <- read.csv(paste0(getwd(),"/RAnalysis/Data/Popgen/Parentages/F1_parentage.csv"), sep = ',', head = T) +F1.Parentage <- read.csv(paste0(getwd(),"/RAnalysis/Data/Popgen/Parentages/F1_parentage.csv"), sep = ',', head = T) %>% + dplyr::mutate(Gen = "F0", + Treatment = NA) # added just to match F2 and F3.Parentage and rbind a master below + +F2.Parentage <- read.csv(paste0(getwd(),"/RAnalysis/Data/Popgen/Parentages/F2_parentage.csv"), sep = ',', head = T) %>% + dplyr::mutate(Gen = "F1", + Batch_5 = NA) # added just to match F1.Parentage and rbind a master below + +F3.Parentage <- read.csv(paste0(getwd(),"/RAnalysis/Data/Popgen/Parentages/F3_parentage.csv"), sep = ',', head = T) %>% + dplyr::mutate(Gen = "F2", + Batch_5 = NA) # added just to match F1.Parentage and rbind a master below + +# use tis later for the pedigree summary, what assignement parents are from which batch +# Objective to learn whether the pedigree assignment via sequoia was even real - were assigned dam and sire pairs +# from the same batch? +Master.Parentage <- rbind(F1.Parentage, + F2.Parentage, + F3.Parentage) +``` -F2.Parentage <- read.csv(paste0(getwd(),"/RAnalysis/Data/Popgen/Parentages/F2_parentage.csv"), sep = ',', head = T) +### parentage edit + +**Objective**: later in this script we will need to overlay the batches at which broodstock egggs and sperm derived +to understnad whther assigned pedigrees (dam and sire from loci) are real - meaning where the dam and sire +assigned with ```sequoia``` actual combined in our contorlled fertilizations? + +* below we edit master parentage to ultimate create columns 'dam.batch' and 'sire.batch' either as NA if +not applicable for that broodstock individual or a comma separated list of batches if so +```{r Master.Parentage.listed} + # pedigree.summary - qurstion, are the pedigree assignments even possible? we know which broodstock pairs were allowed to fertilize + # together by common batch ids in the Master.Parentage file, overlay this information and add boolean T/F + Master.Parentage.listed <- Master.Parentage %>% + dplyr::select(vcf_ID_raw, Ped, matches("Batch")) %>% + dplyr::rename( + id = vcf_ID_raw, + `1` = Batch_1, + `2` = Batch_2, + `3` = Batch_3, + `4` = Batch_4, + `5` = Batch_5 + ) %>% + dplyr::mutate( + dam.batch = + case_when( + str_detect(Ped, "Both|Dam") ~ # when column Ped contais either Both OR Daam + pmap(., ~ { + row <- c(...) + list(names(row[row == 'F'])) + }), + TRUE ~ NA), + sire.batch = + case_when( + str_detect(Ped, "Both|Sire") ~ # when column Ped contais either Both OR Daam + pmap(., ~ { + row <- c(...) + list(names(row[row == 'M'])) + }), + TRUE ~ NA), + ) -F3.Parentage <- read.csv(paste0(getwd(),"/RAnalysis/Data/Popgen/Parentages/F3_parentage.csv"), sep = ',', head = T) + +for (i in 1:nrow(Master.Parentage.listed)) { + + # redo the dam list as character string NA or list comma separated + if (length(Master.Parentage.listed$dam.batch[i][[1]]) == 0) { # cased of 'NULL' + Master.Parentage.listed$dam.batch[i] = 'NA' + } else { # there are batches for dam, list them + Master.Parentage.listed$dam.batch[i] <- paste0((as.data.frame(Master.Parentage.listed$dam.batch[i]) %>% + na.omit())[[1]], # NAs in the list, work it to the right format + collapse=", ") + } + + # redo the sire list as character string NA or list comma separated + if (length(Master.Parentage.listed$sire.batch[i][[1]]) == 0) { # cased of 'NULL' + Master.Parentage.listed$sire.batch[i] = 'NA' + } else { # there are batches for sire, list them + Master.Parentage.listed$sire.batch[i] <- paste0((as.data.frame(Master.Parentage.listed$sire.batch[i]) %>% + na.omit())[[1]], # NAs in the list, work it to the right format + collapse=", ") + } + +} # close the for loop + +# master for all possible dams +Master.Parentage.listed.Dams <- Master.Parentage.listed %>% filter(Ped %in% c("Both", "Dam")) +# master for all possible sires +Master.Parentage.listed.Sires <- Master.Parentage.listed %>% filter(Ped %in% c("Both", "Sire")) + + +# View(Master.Parentage.listed) +# View(Master.Parentage.listed) # take a look its in a book, its a reading rain... its a crazy amount of code to get here! ``` ## load vcf files @@ -52,6 +137,14 @@ All.vcf <- vcfR::read.vcfR(here::here(getwd(), ``` +- use 'All.vcf' for the total analysis, this is ultimately the objetive +but beofre moving forwrad, below we subset these data by generation(s) to test sequoia + +```{r All individuals F0 F1 F2 and F3} +All.vcf # 391 samples, 2,947 variants, 16 chormosomes +``` + + ## How to subset the All.vcf for target variants, samples, chromosomes, etc. - Subset by chromosome(s): @@ -73,68 +166,84 @@ vcf_subset <- vcf[1:1000, ] # Select first 1000 variants vcf_subset <- vcf[, 1:10] # Select first 10 samples (including FORMAT column) ``` + ## Subset the vcf file -### Preliminary (simple) test, F0 and F1 offspring +* objective: to call different vcf file subsets to run pedigree and parentage analysis -- F0 broodstock and F1 offspring: Remember that our experiment ran fir three generations! Here is a best foot forward to test the sequoia pipeline with just parents and offspring. Keep in mind that we do not have grandparents in this trial (requiring F2 offspring!) + - first lets see the calls to subset based on generation and life stage, below our master calls -```{r view the All.vcf} -All.vcf # 391 samples, 2,947 variants -``` +```{r subset calls for vcf generation and life stage} -```{r F0 broodstock and F1 offspring - first simple parent/offspring test of sequoia pipeline} # view cl names to know what to subset by colnames(All.vcf@gt) # F0 are 2:26 -colnames(All.vcf@gt[,2:26]) +colnames(All.vcf@gt[,2:26]) # original parents - founders if you will # F1 juveniles are 63:139 -colnames(All.vcf@gt[,63:139]) +colnames(All.vcf@gt[,63:139]) # first generation of juveniles (direct offspring of F0) +# F2 juveniles are 178:250 +colnames(All.vcf@gt[,178:250]) # second genertation of juveniles (offsring of pH-specifc parents, grandchildren of F0) +# F3 juveniles are 251:392 +colnames(All.vcf@gt[,251:392]) # third generation of juveniles (offpsring of pH-specific parents, grandchildren of F1 pH parents, great graandchildren of F0) +# F1 broodstock 27:62 +colnames(All.vcf@gt[,27:62]) +# F2 broodstock +colnames(All.vcf@gt[,140:177]) -# subset for F0 and F1 juveniles and retain column 1 'Format' -F0BF1J.vcf <- All.vcf[,c(1:26,63:139)] -# view stats -F0BF1J.vcf # now 102 samples! ``` -### Grandparents test, F0 and F1 + F2 offspring +- F0 broodstock and F1 offspring: +Remember that our experiment ran fir three generations! Here is a best foot forward to test the sequoia pipeline with just parents and offspring. Keep in mind that we do not have grandparents in this trial (requiring F2 offspring!) -- second test we will try adding F2 offspring in t +```{r subset vcf file} +# subsets, always retain column 1 'Format' -```{r F0 broodstock and F1 + F2 offspring - parent and grandparent test of sequoia pipeline} -# view cl names to know what to subset by -colnames(All.vcf@gt) -# F0 are 2:26 -colnames(All.vcf@gt[,2:26]) -# F1 juveniles are 63:139 -colnames(All.vcf@gt[,63:139]) -# F2 juveniles are 178:250 -colnames(All.vcf@gt[,178:250]) +#F0 broodstock and F1 offspring - first simple parent/offspring test of sequoia pipeline +F0BF1O.vcf <- All.vcf[,c(1:26,63:139, 27:62)] # 138 samples, 2,947 variants, 16 chromosomes -# subset for F0 and F1 juveniles and retain column 1 'Format' -F0BF1F2J.vcf <- All.vcf[,c(1:26,63:139,178:250)] -# view stats -F0BF1F2J.vcf # now 175 samples! -``` +# F1 broodstock and F2 offspring (treatment specific!) +F1BF2O_LOW.vcf <- All.vcf[,c(1, 27:45, 198:218, 152:163)] # ??? samples, 2,947 variants, 16 chromosomes +F1BF2O_MOD.vcf <- All.vcf[,c(1, 46:62, 219:250, 164:177)] # ??? samples, 2,947 variants, 16 chromosomes +F1BF2O_HIGH.vcf <- All.vcf[,c(1, 27:45, 178:197, 140:152)] # ??? samples, 2,947 variants, 16 chromosomes -```{r} +# F2 broodstock and F3 offspring (treatment specific!) +F2BF3O_LOW.vcf <- All.vcf[,c(1, 152:163, 295:343)] # ??? samples, 2,947 variants, 16 chromosomes +F2BF3O_MOD.vcf <- All.vcf[,c(1, 164:177, 344:392)] # ??? samples, 2,947 variants, 16 chromosomes +F2BF3O_HIGH.vcf <- All.vcf[,c(1, 140:152, 251:294)] # ??? samples, 2,947 variants, 16 chromosomes ``` -```{r} - -``` ```{r create genind} -All.gen <- All.vcf %>% vcfR2genind() -F0BF1J.gen <- F0BF1J.vcf %>% vcfR2genind() -F0BF1F2J.gen <- F0BF1F2J.vcf %>% vcfR2genind() -``` -```{r convert genind to matrices} -All.matrix <- as.matrix(All.gen) -F0BF1J.matrix <- as.matrix(F0BF1J.gen) -F0BF1F2J.matrix <- as.matrix(F0BF1F2J.gen) +# EVERYONE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: + +# all individuals, gret grandparents (F0), grandparents (F1B), parents (F2B), and their offpsrin g(F1J, F2J and F3J) +All.gen <- All.vcf %>% vcfR2genind() + +# F0 AND F1 OFFPSRING ALL :::::::::::::::::::::::::::::::::::::::::: + +# F0 parents and F1 offspring, first test - cretaed the first cohort of low and moderate scallops +F0BF1O.gen <- F0BF1O.vcf %>% vcfR2genind() + +# F1 AND F2 OFFPSRING (treatment specific) ::::::::::::::::::::::::: + +# LOW F1 parents and their F2 offspring +F1BF2O_LOW.gen <- F1BF2O_LOW.vcf %>% vcfR2genind() +# MODERATE F1 parents and their F2 offspring +F1BF2O_MOD.gen <- F1BF2O_MOD.vcf %>% vcfR2genind() +# HIGH F1 parents and their F2 offspring +F1BF2O_HIGH.gen <- F1BF2O_HIGH.vcf %>% vcfR2genind() + +# F2 AND F3 OFFPSRING (treatment specific) ::::::::::::::::::::::::: + +# HIGH F2 parents and their F3 offspring +F2BF3O_LOW.gen <- F2BF3O_LOW.vcf %>% vcfR2genind() +# LOW F2 parents and their F3 offspring +F2BF3O_MOD.gen <- F2BF3O_MOD.vcf %>% vcfR2genind() +# HIGH F2 parents and their F3 offspring +F2BF3O_HIGH.gen <- F2BF3O_HIGH.vcf %>% vcfR2genind() + ``` # **Sequoia** @@ -152,8 +261,9 @@ key features include: - accounts for genotyping errors - does not require predefined lists of candidate parents -```{r read about the package!} +```{r read about the sequoia package!} ?sequoia # the head package, +help(sequoia) ``` ## Format SNP data (vcf file above) for sequoia @@ -164,7 +274,6 @@ key features include: - quite = suppress messages (T/F) - Plot = display the plots of SnpStats (T/F) - Return= reutrn the cleaned genotype matrix using 'GenoM' or use 'excl' to return a list of excluded SNPs and individuals - - Stric = ```{r check format compatibility of vcf file} ?CheckGeno # about this call @@ -191,7 +300,606 @@ Excl <- CheckGeno( names(Excl) ``` -## Execute calls within `sequoia` +## Format required dataframes to run sequoia and call in sequoia + +* GenoM +* LifeHistData +* Pairs +* Pedigree (output from '''sequoia''') + +```{r gather IDs} +# we will need this list of strings to populate ID columns in the required +# dataframes in sequoia, note these must be the same as the columns in the +# vcf SNP matrix! + +# EVERYONE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: +All.ListIDs <- colnames(All.vcf@gt[,2:length(colnames(All.vcf@gt))]) + +# F0 AND F1 OFFPSRING ALL :::::::::::::::::::::::::::::::::::::::::: +F0BF1O.ListIDs <- colnames(F0BF1O.vcf@gt[,2:length(colnames(F0BF1O.vcf@gt))]) + +# F1 AND F2 OFFPSRING (treatment specific) :::::::::::::::::::::::::colnames(F1BF2O_LOW.vcf@gt) +F1BF2O_LOW.ListIDs <- colnames(F1BF2O_LOW.vcf@gt[,2:length(colnames(F1BF2O_LOW.vcf@gt))]) +F1BF2O_MOD.ListIDs <- colnames(F1BF2O_MOD.vcf@gt[,2:length(colnames(F1BF2O_MOD.vcf@gt))]) +F1BF2O_HIGH.ListIDs <- colnames(F1BF2O_HIGH.vcf@gt[,2:length(colnames(F1BF2O_HIGH.vcf@gt))]) + +# F2 AND F3 OFFPSRING (treatment specific) ::::::::::::::::::::::::: +F2BF3O_LOW.ListIDs <- colnames(F2BF3O_LOW.vcf@gt[,2:length(colnames(F2BF3O_LOW.vcf@gt))]) +F2BF3O_MOD.ListIDs <- colnames(F2BF3O_MOD.vcf@gt[,2:length(colnames(F2BF3O_MOD.vcf@gt))]) +F2BF3O_HIGH.ListIDs <- colnames(F2BF3O_HIGH.vcf@gt[,2:length(colnames(F2BF3O_HIGH.vcf@gt))]) + +``` + +* GenoM + - numeric matrix with genotype data coded as 0,1,2 used for ```sequoia```, ```CalcPairLL```, and +```{r GenoM} +# EVERYONE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: +All.GenoM <- as.matrix(All.gen) + +# F0 AND F1 OFFPSRING ALL :::::::::::::::::::::::::::::::::::::::::: +F0BF1O.GenoM <- as.matrix(F0BF1O.gen) + +# F1 AND F2 OFFPSRING (treatment specific) ::::::::::::::::::::::::: +F1BF2O_LOW.GenoM <- as.matrix(F1BF2O_LOW.gen) +F1BF2O_MOD.GenoM <- as.matrix(F1BF2O_MOD.gen) +F1BF2O_HIGH.GenoM <- as.matrix(F1BF2O_HIGH.gen) + +# F2 AND F3 OFFPSRING (treatment specific) ::::::::::::::::::::::::: +F2BF3O_LOW.GenoM <- as.matrix(F2BF3O_LOW.gen) +F2BF3O_MOD.GenoM <- as.matrix(F2BF3O_MOD.gen) +F2BF3O_HIGH.GenoM <- as.matrix(F2BF3O_HIGH.gen) +``` + +* LifeHistData + - dataframe with 6 columns for sampLe metadata +```{r LifeHistData template} + +# data.frame with up to 6 columns: + +# ID max. 30 characters long + +# Sex 1 = female, 2 = male, 3 = unknown, 4 = hermaphrodite, other numbers or NA = unknown + +# BirthYear birth or hatching year, integer, with missing values as NA or any negative number. + +# BY.min minimum birth year, only used if BirthYear is missing + +# BY.max maximum birth year, only used if BirthYear is missing + +# Year.last Last year in which individual could have had offspring. Can e.g. in mammals be the year before death for females, and year after death for males. + + +# OBJECTIVE: +# * below we (1) manually create a lifehist data frame assignming sex as '4' hermaphordites +# (2) merge all parentage broodstock data where we known whether eggs, sperm, or both were used and thus 1,2 or 4 for sex assignment +# (3) lastly merge the first manual lifehist dataframe with the adult broodstock sex assignment for a final 'editted' data + +# 1. LIFE HISTPRY DATA ::::::::::::::::::::::::::: +# * make this manually based on numeric birthyear +# * here we assume the F0s start as year 1 and are 1 year olds, meaning they could spawn until year 3, +# * the remaining generation s follow the same pattern, with viable spawning history fro two years after birth +patterns <- c("F0", "F1", "F2","F3") # a few IDs do not have a 'F' delimiter for generation, these are all F1 juveniles +All.LifeHistData.1 <- as.data.frame(matrix(NA, + ncol = 6, + nrow = length(All.ListIDs))) %>% + rename(ID=V1, + Sex=V2, # make this 4, hermaphordite + BirthYear=V3, + BY.min=V4,# only need if BirthYear is missing, NA + BY.max=V5,# only need if BirthYear is missing, NA + Year.last=V6) %>% + mutate(ID = All.ListIDs, + Sex = 4, + BirthYear = case_when( + grepl("F0", ID) ~ 1, + !grepl(paste(patterns,collapse="|"), ID) ~ 2, # a few F1 juveniles without 'F' in ID, birthyear 2 + grepl("F1", ID) ~ 2, + grepl("F2", ID) ~ 3, + grepl("F3", ID) ~ 4), + + Year.last = case_when( + grepl("F0", ID) ~ 3, + !grepl(paste(patterns,collapse="|"), ID) ~ 4, # a few F1 juveniles without 'F' in ID, birthyear 2 + grepl("F1", ID) ~ 4, + grepl("F2", ID) ~ 5, + grepl("F3", ID) ~ 6), + ) + + +# 2. SEX ::::::::::::::::::::::::::: +# * note that we have controlled spawns where we used eggs and or sperm of the spawners and recorded this information +# * although scallops are hermaphrodites (noted as '4' for all offspring!) we can mark the broodstock as dams sires or both + +# first, run a sanity check before binding all the parentage datafiles +nrow( + rbind( + (F1.Parentage %>% select(vcf_ID_raw, Ped)), + (F2.Parentage %>% select(vcf_ID_raw, Ped)), + (F3.Parentage %>% select(vcf_ID_raw, Ped)) + ) + ) # 107 rows bind ing these data +nrow(F1.Parentage) + nrow(F2.Parentage) + nrow(F3.Parentage) # 107 +# great, move forwad with binding and editting for life history data +# find the parentage data files and edit them +All.Sex <- rbind( + (F1.Parentage %>% select(vcf_ID_raw, Ped)), + (F2.Parentage %>% select(vcf_ID_raw, Ped)), + (F3.Parentage %>% select(vcf_ID_raw, Ped)) + ) %>% + dplyr::mutate(Sex = case_when( + Ped %in% "Dam" ~ 1, # female = only eggs contribute to spawns + Ped %in% "Sire" ~ 2, # male = only sperm contribute to spawns + Ped %in% "Both" ~ 4 # both eggs and sperm were used + )) %>% + dplyr::select(!Ped) %>% + dplyr::rename(ID = vcf_ID_raw) + + +# 3. MERGE LIFEHIST DATAFRAME WITH BROODSTOCK SEX ASSIGNMENT ::::::::::::::::::::::::::: +# now edit the lifehistdata including information for the Sex dataframe +All.LifeHistData.2 <- merge( + dplyr::filter(All.LifeHistData.1, !grepl(c("-B"), ID)), # absent of all broodstock + All.Sex, # merge in the broodstock data + all = T) %>% + dplyr::mutate(BirthYear = case_when( + grepl("F0", ID) ~ 1, + # a few F1 juveniles without 'F' in ID, birthyear 2 + !grepl(paste(patterns,collapse="|"), ID) ~ 2, + grepl("F1", ID) ~ 2, + grepl("F2", ID) ~ 3, + grepl("F3", ID) ~ 4), + + Year.last = case_when( + grepl("F0", ID) ~ 2, + # a few F1 juveniles without 'F' in ID, birthyear 2 + !grepl(paste(patterns,collapse="|"), ID) ~ 3, + grepl("F1", ID) ~ 3, + grepl("F2", ID) ~ 4, + grepl("F3", ID) ~ 5) + ) +``` + +```{r LifeHistData assigned} +# EVERYONE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: +# omit IDs that we do not have data for (in vcfs!) +All.LifeHistData <- All.LifeHistData.2 %>% filter(ID %in% colnames(All.vcf@gt)) + +# F0 AND F1 OFFPSRING ALL :::::::::::::::::::::::::::::::::::::::::: +F0BF1O.LifeHistData <- dplyr::filter(All.LifeHistData, !grepl(c("F2|F3"), ID)) + +# F1 AND F2 OFFPSRING (treatment specific) ::::::::::::::::::::::::: +F1BF2O <- dplyr::filter(All.LifeHistData, grepl(c("F1-B|F2-J|F2-B"), ID)) +F1BF2O_LOW.LifeHistData <- dplyr::filter(F1BF2O, grepl("pH8", ID)) +F1BF2O_MOD.LifeHistData <- dplyr::filter(F1BF2O, grepl("pH75", ID)) +F1BF2O_HIGH.LifeHistData <- rbind( + # filter only pH8 F1 broodstock from the LOW above + dplyr::filter(F1BF2O_LOW.LifeHistData, grepl("F1-B", ID)), + # bind to filtered data for just pH7 - these are only juveniles started from pH8 offspring after set + dplyr::filter(F1BF2O, grepl("pH7\\.", ID)) + ) +# F2 AND F3 OFFPSRING (treatment specific) ::::::::::::::::::::::::: +F2BF3O <- dplyr::filter(All.LifeHistData, grepl(c("F2-B|F3"), ID)) +F2BF3O_LOW.LifeHistData <- dplyr::filter(F2BF3O, grepl("pH8", ID)) +F2BF3O_MOD.LifeHistData <- dplyr::filter(F2BF3O, grepl("pH75", ID)) +F2BF3O_HIGH.LifeHistData <- dplyr::filter(F2BF3O, grepl("pH7\\.", ID)) + + +``` + +* Pedigree + - run ```sequoia``` for pedigree reconstruction based on SNP data including parenange assignment + and sibship clustering. Note that other commands require pedigree input as 3 columns id-dam-sire, + with sample ids for parentage - here we calculate it + + - **about inputs** - GenoM +```{r about sequoia to get pedigree} +?sequoia +# sequoia( +# GenoM = NULL, +# LifeHistData = NULL, +# SeqList = NULL, +# Module = "ped", +# Err = 1e-04, +# Tfilter = -2, +# Tassign = 0.5, +# MaxSibshipSize = 100, +# DummyPrefix = c("F", "M"), +# Complex = "full", +# Herm = "no", +# UseAge = "yes", +# args.AP = list(Flatten = NULL, Smooth = TRUE), +# mtSame = NULL, +# CalcLLR = TRUE, +``` + + + +* note: after some trial and error I found that inputting all SNPs results in no data! +alternatively, inputing a subset of the first 20-100 SNPs did result in parentage assignment, +below I wrote a for loop that is iterated (bootstrapped) 100 times each time calling 50 random SNPs +of the vcf file, this outputs to a cumulative table to truncate parentage assignment by the best log liklihood result (LLR) + +## BootPed + +**Objective:** Run a custom function ```BootPed``` for the user to run a bootstrapped ```sequoia``` parentage assignment +based on the number of SNPs and number of iterations. + +**inputs:** the user assigns the target full matrix (all SNPs included) and life history metadata, and chooses a cutoff for the number of input SNPs and number of times to run ```sequoia```. + +**outputs:** pedigree.raw, pedigree.summary, and pedigree.final. + + * Raw - dataframe with each pedigree output from all sequoia runs, a true cumulative output table. Therefore one should expect multiple results for a given individual. This dataframe contains the dam and sire assignment with the log likelihood ratio for each offspring. + + * Summary - dataframe with the sum absolute log liklihood ratio for all dam and sire assignments grouped by id. Importantly we also overlay the columns 'dam.batch', 'sire.batch', and 'Fertilization.pairs'! 'batch' numbers represent the ids for each manual batch fertilization - menaing the controlled fertilizations of eggs (dams) and sperm (sires) for which we have a prior knowledge of **expected pairs**. Therefore overlay batch number between a sire and dam suggests a TRUE pair, whereas if dam and sire assignment does not have a common batch number then we have no evidence of this pair. **we ultimately target all pedigrees to reflect expected pairs** + + * Final - dataframe with a single dam+sire pairing for each offspring id, the threshold for this being two criteria: (1) must be TRUE for 'Fertilization.pair' (2) highest LLR for each id + +```{r pedigree function 'BootPed'} + +BootPed <- function(GenoM, LifeHistData, n.SNPs, n.bootstrap) { + + pedigree.raw <- data.frame(matrix(ncol = 7)) # create dataframe to save cumunalitively during for loop + colnames(pedigree.raw) <- c('id', 'loci', 'n.loci', 'dam', 'LLRdam', 'sire' , 'LLRsire') # names for comuns in the for loop + + for (i in 1:n.bootstrap) { # n.bootstrap, number of times the for loop is iterated + # call n.SNPs from the matrix + randomSNPs <- array(sample(c(sample(1:ncol(GenoM), n.SNPs, replace = TRUE)))) + # truncate the GenoM by the column numbers in randomSNPs + bootstrap_GenoM <- GenoM[,randomSNPs] + SNP_IDs <- paste0(colnames(bootstrap_GenoM), collapse=", ") + # run seqquoia for these 50 SNPs + bootstrap.sequoia <- sequoia( + GenoM = bootstrap_GenoM, + LifeHistData = LifeHistData, + SeqList = NULL, + # most comp intensive, run everything + Module = "par", + Err = 1e-04, + # threshold for log 10 likelihood (LLR) between a proposed relationship versus unrelated + Tfilter = -2, + # minimum LLR required for acceptance of proposed relationship relative to the next most likely + Tassign = 0.2, + # MaxSibshipSize = 100, + # breeding system complexity + Complex = "full", + Herm = "A", + UseAge = "extra", + quiet = TRUE, + CalcLLR = TRUE + ) + # add results from sequoia to cumulative table + df_loop <- data.frame(bootstrap.sequoia$PedigreePar %>% + select(id, dam, LLRdam, sire, LLRsire) %>% + na.omit()) %>% + mutate(loci = SNP_IDs, + n.loci = ncol(bootstrap_GenoM)) + pedigree.raw <- rbind(pedigree.raw, df_loop) %>% na.omit() #bind to a cumulative list dataframe + } # end for loop +# OUTSIDE FOR LOOP +# pedigree.raw - contains the SNPs called for each assignment and the absolute value for the sum of dam and sire assignment +pedigree.raw$absLLRtotal <- abs(pedigree.raw$LLRdam) + abs(pedigree.raw$LLRsire) + +# pedigree.summary - insert a TRUE FALSE column 'Fertilization_pairs' for those dam and sire +# assignments that are true batch pairs TRUE or that were not manually fertilized FALSE +# objective is to achieve all TRUE values +# dataframe Master.Parentage.listed.Dams and Master.Parentage.listed.Sires is in a chunk at +# the start of this script - edit and rename for ease of merging with the raw pedigree df +Dams <- Master.Parentage.listed.Dams %>% select(id,dam.batch) %>% rename(dam = id) +Sires <- Master.Parentage.listed.Sires %>% select(id,sire.batch) %>% rename(sire = id) +pedigree.merge.dams <- merge(as.data.frame(pedigree.raw), Dams) +pedigree.merge.dams.sires <- merge(pedigree.merge.dams, Sires) + +pedigree.summary <- pedigree.merge.dams.sires %>% + mutate(Fertilization_pairs = + sapply(seq_len(nrow(.)), + function(i) { + set1 <- as.numeric(unlist(strsplit(as.character(sire.batch[i]),", "))) + set2 <- as.numeric(unlist(strsplit(as.character(dam.batch[i]),", "))) + any(set1 %in% set2) + }) + ) + + +# pedigree.final - outputs the three columns needed for CalcPairLL in sequoia +# truncates the 'raw' file above for just a single id per row, as that with the GREATEST absLLRtotal +pedigree.final <- pedigree.summary %>% + group_by(id) %>% # group by id - there are mutliple occurances of pedigree assign for ids! + dplyr::top_n(1, absLLRtotal) %>% # take the best hit essentiall, highest LLR total + dplyr::select(id, dam, sire, absLLRtotal, Fertilization_pairs, loci) # select the target columns for next sequoia run + +# Now we want to ensure we have pedigree results for all target offspring +# to do this, obtian an integer for the number of samples that are offspring +# lets leverage BirthYear of the LifeHist dataset - here our LOWEST birthyear ALWAYS (check this!) +# represents the parental broodstock, whereas NO OFFSPRING SHARE BIRTHYEAR WITH THE PARENTS (or shouldnt, check this!) +# below we obtain 'offspring.n' as the integer for the number of rows that are offspring +# The minmumum birthyear is attribute with the parents - we +offspring.n <- nrow(LifeHistData %>% filter(!BirthYear %in% min(BirthYear))) + + +if ( length(unique(pedigree.raw$id)) < offspring.n) {# TRUE = not enough bootstrap runs + + print(paste0("Predigree summary: ", + length(unique(pedigree.raw$id)), + "/", + offspring.n, + " offspring with pedigree assignment; ", + nrow(pedigree.final %>% filter(Fertilization_pairs %in% 'TRUE')), + "/", + nrow(pedigree.final), + "true fertilized pairs")) + + print(paste0("Edit the n.SNP or n.bootstrap call for better pedigree")) + + } else { + + print(paste0("Predigree summary: ", + length(unique(pedigree.raw$id)), + "/", + offspring.n, + " offspring with pedigree assignment; ", + nrow(pedigree.final %>% filter(Fertilization_pairs %in% 'TRUE')), + "/", + nrow(pedigree.final), + " TRUE fertilized pairs")) + + print(paste0("Proceed, all offspring have at least 1 pedigree assignment")) + } + +return(list(raw = pedigree.raw, + summary = pedigree.summary, + final = pedigree.final)) + +} # end function +``` + +## BootPed Run + +* first sanity check that the matrix == life history data, edit if necessary +```{r BootPed prep} + +# FIRST SANITY CHECK THAT GENOM HAS ALL IDS OF LIFEHISTDATA + +# F0 AND F1 OFFPSRING ALL :::::::::::::::::::::::::::::::::::::::::: +sort(rownames(F0BF1O.GenoM)) == sort(F0BF1O.LifeHistData$ID) # falses here +F0BF1O.GenoM_final <- F0BF1O.GenoM[row.names(F0BF1O.GenoM) %in% F0BF1O.LifeHistData$ID, ] # force it +sort(rownames(F0BF1O.GenoM_final)) == sort(F0BF1O.LifeHistData$ID) # now true + + +# F1 AND F2 OFFPSRING (treatment specific) ::::::::::::::::::::::::: +# low +sort(rownames(F1BF2O_LOW.GenoM)) == sort(F1BF2O_LOW.LifeHistData$ID) # falses here +F1BF2O_LOW.GenoM_final <- F1BF2O_LOW.GenoM[row.names(F1BF2O_LOW.GenoM) %in% F1BF2O_LOW.LifeHistData$ID, ] # force it +sort(rownames(F1BF2O_LOW.GenoM_final)) == sort(F1BF2O_LOW.LifeHistData$ID) # now true + +# moderate +sort(rownames(F1BF2O_MOD.GenoM)) == sort(F1BF2O_MOD.LifeHistData$ID) # falses here +F1BF2O_MOD.GenoM_final <- F1BF2O_MOD.GenoM[row.names(F1BF2O_MOD.GenoM) %in% F1BF2O_MOD.LifeHistData$ID, ] # force it +sort(rownames(F1BF2O_MOD.GenoM_final)) == sort(F1BF2O_MOD.LifeHistData$ID) # now true + +# high +sort(rownames(F1BF2O_HIGH.GenoM)) == sort(F1BF2O_HIGH.LifeHistData$ID) # falses here +F1BF2O_HIGH.GenoM_final <- F1BF2O_HIGH.GenoM[row.names(F1BF2O_HIGH.GenoM) %in% F1BF2O_HIGH.LifeHistData$ID, ] # force it +sort(rownames(F1BF2O_HIGH.GenoM_final)) == sort(F1BF2O_HIGH.LifeHistData$ID) # now true + +# F2 AND F3 OFFPSRING (treatment specific) ::::::::::::::::::::::::: +# low +sort(rownames(F2BF3O_LOW.GenoM)) == sort(F2BF3O_LOW.LifeHistData$ID) # falses here +F2BF3O_LOW.GenoM_final <- F2BF3O_LOW.GenoM[row.names(F2BF3O_LOW.GenoM) %in% F2BF3O_LOW.LifeHistData$ID, ] # force it +sort(rownames(F2BF3O_LOW.GenoM_final)) == sort(F2BF3O_LOW.LifeHistData$ID) # now true + +# moderate +sort(rownames(F2BF3O_MOD.GenoM)) == sort(F2BF3O_MOD.LifeHistData$ID) # falses here +F2BF3O_MOD.GenoM_final <- F2BF3O_MOD.GenoM[row.names(F2BF3O_MOD.GenoM) %in% F2BF3O_MOD.LifeHistData$ID, ] # force it +sort(rownames(F2BF3O_MOD.GenoM_final)) == sort(F2BF3O_MOD.LifeHistData$ID) # now true + +# high +sort(rownames(F2BF3O_HIGH.GenoM)) == sort(F2BF3O_HIGH.LifeHistData$ID) # falses here +F2BF3O_HIGH.GenoM_final <- F2BF3O_HIGH.GenoM[row.names(F2BF3O_HIGH.GenoM) %in% F2BF3O_HIGH.LifeHistData$ID, ] # force it +sort(rownames(F2BF3O_HIGH.GenoM_final)) == sort(F2BF3O_HIGH.LifeHistData$ID) # now true + + +# BootPed(GenoM, LifeHistData, outputstring) +sort(rownames(F1BF2O_MOD.GenoM)) == sort(F1BF2O_MOD.LifeHistData$ID) +F1BF2O_MOD.GenoM_final <- F1BF2O_MOD.GenoM[row.names(F1BF2O_MOD.GenoM) %in% F1BF2O_MOD.LifeHistData$ID, ] +sort(rownames(F1BF2O_MOD.GenoM_final)) == sort(F1BF2O_MOD.LifeHistData$ID) + +``` + +* run BootPed for F0BF1J + +inputs: + - GenoM = F0BF1O.GenoM_final + - LifeHistData = F0BF1O.LifeHistData + - n.SNP = 50 + - n.bootstrap = 100 + +output: + - "Predigree summary: 102/102 offspring with pedigree assignment; 81/103 TRUE fertilized pairs" + "Proceed, all offspring have at least 1 pedigree assignment" + +```{r BootPed run F0BF1J} + +# F0 AND F1 OFFPSRING ALL :::::::::::::::::::::::::::::::::::::::::: +F0BF1O.sequoia <- BootPed( + F0BF1O.GenoM_final, + F0BF1O.LifeHistData, + 50, + 100 + ) + +# data files +F0BF1O.pedigree.raw <- as.data.frame(F0BF1O.sequoia$raw) +rownames(F0BF1O.pedigree.raw) <- NULL # renomve rownames + +F0BF1O.pedigree.summary <- as.data.frame(F0BF1O.sequoia$summary) +rownames(F0BF1O.pedigree.summary) <- NULL # renomve rownames +F0BF1O.pedigree.summary <- apply(F0BF1O.pedigree.summary,2,as.character) # need to do this to output the list of batches! + + +F0BF1O.pedigree.final <- as.data.frame(F0BF1O.sequia$final) +rownames(F0BF1O.pedigree.final) <- NULL # renomve rownames + +# output +write.csv(F0BF1O.pedigree.raw, "RAnalysis/Output/Popgen/parentage_sequoia/F0BF1O/F0BF1O_raw.csv") +write.csv(F0BF1O.pedigree.summary, "RAnalysis/Output/Popgen/parentage_sequoia/F0BF1O/F0BF1O_summary.csv") +write.csv(F0BF1O.pedigree.final, "RAnalysis/Output/Popgen/parentage_sequoia/F0BF1O/F0BF1O_final.csv") +``` + + +* run BootPed for F1BF2J (each treatment) + +inputs: + - GenoM = F1BF2O_.GenoM_final + - LifeHistData = F1BF2O_.LifeHistData + - n.SNP = 50 + - n.bootstrap = 100 + +output: + - Low + + - Moderate + + - High + + +```{r BootPed run F1BF2J for each treatment} + +# F1 AND F2 OFFPSRING (treatment specific) ::::::::::::::::::::::::: + +# low +F1BF2O_LOW.sequoia <- BootPed( + F1BF2O_LOW.GenoM_final, + F1BF2O_LOW.LifeHistData, + 30, + 100 + ) +# run on 12/21/2024 +# [1] "Predigree summary: 27/46 offspring with pedigree assignment; 12/27true fertilized pairs" +# [1] "Edit the n.SNP or n.bootstrap call for better pedigree" + +# data files +F1BF2O_LOW.pedigree.raw <- as.data.frame(F1BF2O_LOW.sequoia$raw) +rownames(F1BF2O_LOW.pedigree.raw) <- NULL # renomve rownames + +F1BF2O_LOW.pedigree.summary <- as.data.frame(F1BF2O_LOW.sequoia$summary) +rownames(F1BF2O_LOW.pedigree.summary) <- NULL # renomve rownames +F1BF2O_LOW.pedigree.summary <- apply(F1BF2O_LOW.pedigree.summary,2,as.character) # need to do this to output the list of batches! + +F1BF2O_LOW.pedigree.final <- as.data.frame(F1BF2O_LOW.sequoia$final) +rownames(F1BF2O_LOW.pedigree.final) <- NULL # renomve rownames + +# output +write.csv(F1BF2O_LOW.pedigree.raw, "RAnalysis/Output/Popgen/parentage_sequoia/F1BF2O/Low/F1BF2O_Low_raw.csv") +write.csv(F1BF2O_LOW.pedigree.summary, "RAnalysis/Output/Popgen/parentage_sequoia/F1BF2O/Low/F1BF2O_Low_summary.csv") +write.csv(F1BF2O_LOW.pedigree.final, "RAnalysis/Output/Popgen/parentage_sequoia/F1BF2O/Low/F1BF2O_Low_final.csv") + + + + + +# moderate +F1BF2O_MOD.sequoia <- BootPed( + F1BF2O_MOD.GenoM_final, + F1BF2O_MOD.LifeHistData, + 30, + 100 + ) +# run on 12/21/2024 +# [1] "Predigree summary: 46/46 offspring with pedigree assignment; 21/47 TRUE fertilized pairs" +# [1] "Proceed, all offspring have at least 1 pedigree assignment" + +# data files +F1BF2O_MOD.pedigree.raw <- as.data.frame(F1BF2O_MOD.sequoia$raw) +rownames(F1BF2O_MOD.pedigree.raw) <- NULL # renomve rownames + +F1BF2O_MOD.pedigree.summary <- as.data.frame(F1BF2O_MOD.sequoia$summary) +rownames(F1BF2O_MOD.pedigree.summary) <- NULL # renomve rownames +F1BF2O_MOD.pedigree.summary <- apply(F1BF2O_MOD.pedigree.summary,2,as.character) # need to do this to output the list of batches! + +F1BF2O_MOD.pedigree.final <- as.data.frame(F1BF2O_MOD.sequoia$final) +rownames(F1BF2O_MOD.pedigree.final) <- NULL # renomve rownames + +# output +write.csv(F1BF2O_MOD.pedigree.raw, "RAnalysis/Output/Popgen/parentage_sequoia/F1BF2O/Moderate/F1BF2O_Mod_raw.csv") +write.csv(F1BF2O_MOD.pedigree.summary, "RAnalysis/Output/Popgen/parentage_sequoia/F1BF2O/Moderate/F1BF2O_Mod_summary.csv") +write.csv(F1BF2O_MOD.pedigree.final, "RAnalysis/Output/Popgen/parentage_sequoia/F1BF2O/Moderate/F1BF2O_Mod_final.csv") + + + + + + +# high +F1BF2O_HIGH.sequoia <- BootPed( + F1BF2O_HIGH.GenoM_final, + F1BF2O_HIGH.LifeHistData, + 30, + 200 + ) +# run on 12/21/2024 +# [1] "Predigree summary: 33/33 offspring with pedigree assignment; 18/33 TRUE fertilized pairs" +# [1] "Proceed, all offspring have at least 1 pedigree assignment" + +# data files +F1BF2O_HIGH.pedigree.raw <- as.data.frame(F1BF2O_HIGH.sequoia$raw) +rownames(F1BF2O_HIGH.pedigree.raw) <- NULL # renomve rownames + +F1BF2O_HIGH.pedigree.summary <- as.data.frame(F1BF2O_HIGH.sequoia$summary) +rownames(F1BF2O_HIGH.pedigree.summary) <- NULL # renomve rownames +F1BF2O_HIGH.pedigree.summary <- apply(F1BF2O_HIGH.pedigree.summary,2,as.character) # need to do this to output the list of batches! + +F1BF2O_HIGH.pedigree.final <- as.data.frame(F1BF2O_HIGH.sequoia$final) +rownames(F1BF2O_HIGH.pedigree.final) <- NULL # renomve rownames + +# output +write.csv(F1BF2O_HIGH.pedigree.raw, "RAnalysis/Output/Popgen/parentage_sequoia/F1BF2O/High/F1BF2O_High_raw.csv") +write.csv(F1BF2O_HIGH.pedigree.summary, "RAnalysis/Output/Popgen/parentage_sequoia/F1BF2O/High/F1BF2O_High_summary.csv") +write.csv(F1BF2O_HIGH.pedigree.final, "RAnalysis/Output/Popgen/parentage_sequoia/F1BF2O/High/F1BF2O_High_final.csv") +``` + + +* run BootPed for F2BF3J (each treatment) + +inputs: + - GenoM = F2BF3O_.GenoM_final + - LifeHistData = F2BF3O_.LifeHistData + - n.SNP = 50 + - n.bootstrap = 100 + +output: + - Low + + - Moderate + + - High + + +```{r BootPed run F2BF3J for each treatment} + +# F2 AND F3 OFFPSRING (treatment specific) ::::::::::::::::::::::::: + +# low +BootPed( + F2BF3O_LOW.GenoM_final, + F2BF3O_LOW.LifeHistData, + 50, + 100 + ) +# moderate +BootPed( + F2BF3O_MOD.GenoM_final, + F2BF3O_MOD.LifeHistData, + 50, + 100 + ) +# high +BootPed( + F2BF3O_HIGH.GenoM_final, + F2BF3O_HIGH.LifeHistData, + 50, + 100 + ) +``` ## `CalcPairLL` @@ -210,7 +918,7 @@ pairwise relationship likelihoods - FA - full avuncular - HA - Half avuncular and other 3rd degree relationships - U - Unrelated -- 2nd - ybclear which type of 2nd degree rel (HS, GP, or FA) +- 2nd - unclear which type of 2nd degree rel (HS, GP, or FA) - ?? - Unclear which type of 1st, 2nd or 3rd degree relatives ### Preliminary (simple) test, F0 and F1 offspring @@ -226,16 +934,45 @@ Data: # PREPARE NECESSARY INPUTS! # Pairs - dataframe with columns ID1 and ID2 containing all possible combinations -F0BF1J.ListIDs <- colnames(F0BF1J.vcf@gt[,2:length(colnames(F0BF1J.vcf@gt))]) -F0BF1J.Pairs_raw <- data.frame(F0BF1J.listIDs) %>% - dplyr::rename(ID1 = F0BF1J.listIDs) %>% # rename +F0BF1J.Pairs_raw <- data.frame(F0BF1J.ListIDs) %>% + dplyr::rename(ID1 = F0BF1J.ListIDs) %>% # rename dplyr::mutate(ID2 = ID1) %>% # duplicate - tidyr::expand(ID1, ID2) # get all possible ocmbinations + tidyr::expand(ID1, ID2) %>% # get all possible ocmbinations + dplyr::mutate(AgeDif = case_when( + # ID1 and ID2 are F0 broodstock + (grepl("F0", ID1, ignore.case = TRUE) & + grepl("F0", ID2, ignore.case = TRUE)) ~ 0, + # ID1 and ID2 are F1 Juveniles + (!grepl("F0", ID1, ignore.case = TRUE) & + !grepl("F0", ID2, ignore.case = TRUE)) ~ 0, + # ID1 is F1 juvenile and ID2 is F0 broodstock + (!grepl("F0", ID1, ignore.case = TRUE) & + grepl("F0", ID2, ignore.case = TRUE)) ~ 1, + # IF1 is F0 broodstock and ID2 is F1 juvenile + (grepl("F0", ID1, ignore.case = TRUE) & + !grepl("F0", ID2, ignore.case = TRUE)) ~ -1, + )) F0BF1J.Pairs <- F0BF1J.Pairs_raw[F0BF1J.Pairs_raw$ID1 != F0BF1J.Pairs_raw$ID2,] +# View(F0BF1J.Pairs) + # GenoM F0BF1J.matrix # for GenoM +# Run UT! +# WITH JUST THE PAIRS AND GENOM +F0BF1J.CalcPairLL <- CalcPairLL(Pairs = F0BF1J.Pairs, + GenoM = F0BF1J.matrix, + Err = 1e-04, + Herm = "A", + Plot=FALSE) + +View(F0BF1J.CalcPairLL) + + +# add pedigree data note that we have the info for males and gemles (eggs and sperm +# contributed by F0 broodstock to batch fertilization. + # Pedigree F0BF1J.IDs <- as.data.frame(table(F0BF1J.ListIDs, dnn = list("id"))) %>% select(id) F0B.Pedigree <- pivot_wider( @@ -256,7 +993,7 @@ F0B.Pedigree <- pivot_wider( F0BF1J.Pedigree <- merge(F0B.Pedigree, F0BF1J.IDs, all= T) PedPolish(F0BF1J.Pedigree)# check - +View(F0BF1J.Pedigree) # LifeHistDate LifeHistData_scallop <- @@ -265,13 +1002,20 @@ LifeHistData_scallop <- AgePrior_scallop <- +CalcPairLL(Pairs = F0BF1J.Pairs, + GenoM = F0BF1J.matrix, + Err = 1e-04, + Plot=FALSE) +tail(SeqOUT_griffin$PedigreePar, n=3) # RUN IT! + + CalcPairLL( Pairs = F0BF1J.Pairs, GenoM = F0BF1J.matrix, - Pedigree = F0BF1J.Pedigree, - LifeHistData = NULL, # working on it + Pedigree = as.data.frame(F0BF1J.pedigree), + LifeHistData = F0BF1J.LifeHistData.editted, # working on it AgePrior = TRUE, # working on it SeqList = NULL, Complex = "full",