Merge pull request #8 from MedVIC-Lab/testing

Tushar additions + basic publication sorting

Author: JakeWags

.gitignore

@@ -59,9 +59,6 @@ typings/
 .env
 .env.test
 
-# Nuxt build directory
-.nuxt
-
 # Nuxt generate directory
 dist
 
@@ -78,4 +75,12 @@ static
 *.ntvs*
 *.njsproj
 *.sln
-*.sw?
+*.sw?
+
+# publication, projects, and members JSON
+/public/assets/publications.json
+/public/assets/projects.json
+/public/assets/members.json
+
+# OS generated files
+.DS_Store

.vitepress/config.mts

@@ -13,7 +13,8 @@ export default defineConfig({
       { text: 'Home', link: '/' },
       { text: 'About', link: '/pages/about' },
       { text: 'People', link: '/pages/people' },
-      { text: 'Projects', link: '/pages/projects' },
+      // Uncommnet when projects are added
+      // { text: 'Projects', link: '/pages/projects' },
       { text: 'Publications', link: '/pages/publications' },
     ],
   },

.vitepress/theme/custom.css

@@ -1,60 +0,0 @@
-a {
-  color: #007bff!important;
-}
-
-a:hover {
-  text-decoration: underline!important;
-}
-
-a:visited {
-  color: #18508c!important;
-}
-
-h1 {
-  font-size: 2.5em;
-  margin-bottom: 20px;
-  color: #333;
-}
-
-h2 {
-  font-size: 1.5em;
-  margin-bottom: 10px;
-  color: #333;
-}
-
-h3 {
-  font-size: 1.25em;
-  margin-bottom: 10px;
-  color: #333;
-}
-
-h4 {
-  font-size: 1em;
-  margin-bottom: 10px;
-  color: #333;
-}
-
-h5 {
-  font-size: 0.875em;
-  margin-bottom: 10px;
-  color: #333;
-}
-
-h6 {
-  font-size: 0.75em;
-  margin-bottom: 10px;
-  color: #333;
-}
-
-p {
-  margin-bottom: 20px;
-  color: #555;
-}
-
-code {
-  background-color: #f5f5f5; /* Light gray background */
-  padding: 2px 4px; /* Padding around the code */
-  border-radius: 4px; /* Rounded corners */
-  font-family: 'Courier New', Courier, monospace; /* Monospace font */
-  color: #333; /* Text color */
-}

.vitepress/theme/index.ts

@@ -5,6 +5,7 @@ import './custom.css'
 const layouts = import.meta.glob('../../layouts/*.vue')
 
 export default {
+  Layout: DefaultTheme.Layout,
   extends: DefaultTheme,
   enhanceApp({ app }) {
     // Register each layout component

index.md

@@ -1,5 +1,4 @@
 ---
-# https://vitepress.dev/reference/default-theme-home-page
 layout: home
 
 hero:

layouts/project.vue

@@ -1,5 +1,5 @@
 <template>
-  <div class="project-layout">
+  <div class="project-layout vp-doc">
     <div class="project-content">
       <h1>{{ frontmatter.name }}</h1>
       <Content />
@@ -28,8 +28,9 @@
 </template>
 
 <script setup>
-import { Content, useData } from 'vitepress'
-const { frontmatter } = useData()
+import { Content, useData } from 'vitepress';
+
+const { frontmatter } = useData();
 </script>
 
 <style>

pages/people/katariaTushar.md

@@ -0,0 +1,22 @@
+---
+layout: person
+name: "Tushar Kataria"
+role: "PhD Student" 
+title: "PhD Candidate" # e.g., "PhD Student", "MS Student", "Staff", "Researcher", "Alumni"
+org: "University of Utah, SCI Institute"
+avatar: "katariaTushar.png" # Replace with the URL to your avatar image
+links:
+  - icon: "github"
+    link: "https://github.com/tushaarkataria" # Replace with your GitHub profile link
+  - icon: "linkedin"
+    link: "https://www.linkedin.com/in/tushar-kataria-05a69456/"
+  - icon: "website"
+    link: "https://tushaarkataria.github.io" # Replace with your personal website link
+---
+
+# About Krithika Iyer
+
+I am Tushar Kataria, a PhD candidate at University of Utah, Utah in School of Computing. I am in Scientific Computing and Imaging Institute advised by Prof. Shireen Elhabian.
+
+Broader research interests are image processing, medical image processing, deep learning and computer vision. Specifically, I am interested in Semantic Segmentation, Instance Segmentation and Domain Adaptation problems for medical imaging datasets. I am also interested in Statistical Shape Modelling and MultiModal machine learning. Current work involves conditional generation model with application in virtual staining and 3D volume Registration
+

pages/projects/example.md

@@ -43,7 +43,7 @@ Testing in an h6
 
 ## Testing a code block
 
-```
+```js
 const jake = "is cool";
 console.log(jake.replace("cool", "uncool"));
 ```

pages/publications.md

@@ -9,7 +9,22 @@ const publications = ref([])
 
 onMounted(async () => {
   const response = await fetch('/assets/publications.json')
-  publications.value = await response.json()
+  const pubs = await response.json()
+
+  // TODO: update with better sorting when functionality added to UI
+  // sort by year, then by first author (alphabetical)
+  publications.value = pubs.sort((a, b) => {
+    if (a.year !== b.year) {
+      return b.year - a.year; // Sort by year in descending order
+    }
+    // Sort by first author alphabetically (last name)
+    const aFirstAuthor = a.authors.split(',')[0]
+    const bFirstAuthor = b.authors.split(',')[0]
+    const aLastName = aFirstAuthor.split(' ').pop()
+    const bLastName = bFirstAuthor.split(' ').pop()
+
+    return aLastName.localeCompare(bLastName);
+  })
 })
 </script>
 

pages/publications/uncertain_deepssm.md renamed to pages/publications/2020_uncertain_deepssm.md

@@ -5,7 +5,7 @@ conference: "Shape in Medical Imaging (ShapeMI) at MICCAI"
 year: "2020"
 link: "https://arxiv.org/abs/2007.06516"
 image:
-  src: "uncertain_deepssm.png"
+  src: "2020_uncertain_deepssm.png"
   alt: Results Highlight
 ---