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Merge pull request #13 from MedVIC-Lab/individual-publication-pages
Individual publication pages
2 parents e8b3e3a + 3d74dab commit 045644a

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‎.vitepress/theme/custom.css‎

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- **Often, !important is required to override the default styles.
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*/
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/* Header */
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.VPNavBarTitle .title {
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font-size: 1.75em !important;
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}
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.VPNavBarMenuLink {
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font-size: 1.05em !important;
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}
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/* Container widths */
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@media (min-width: 1440px) {
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.VPDoc:not(.has-sidebar) .content {

‎README.md‎

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```markdown
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---
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layout: publication
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title: "Publication Title"
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authors: "Author1, Author2"
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conference: "Conference Name"
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year: "Year"
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link: "https://example.com/publication-link" # Optional: Replace with the URL to the publication
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links:
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archive: "example.com" (optional)
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code: "example.com" (optional)
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publisher: "example.com" (optional)
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pdf: "example.com" (optional)
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video: "example.com" (optional)
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image:
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src: "example.png"
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alt: "Example Alt Text"
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---
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```
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Note: images should be added to `/public/assets/images/publications/`. These should be *graphical abstracts* and should not contain captions.
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Note: images should be added to `/public/assets/images/publications/`.
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Additional note: Images should be *graphical abstracts* and should not contain captions.
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3. **Add content to your Markdown file:** (WORK IN PROGRESS)
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- Below the frontmatter, add any additional information about the publication.

‎layouts/publication.vue‎

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<template>
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<div>
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<h1>{{ frontmatter.title }}</h1>
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<p>{{ frontmatter.authors }}</p>
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<p>{{ frontmatter.conference }}</p>
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<p>{{ frontmatter.year }}</p>
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<div class="publication-layout vp-doc">
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<div class="publication-content">
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<img v-if="frontmatter.image" :src="`../../assets/images/publications/${frontmatter.image.src}`" :alt="frontmatter.image.alt" class="publication-image" />
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<Content />
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</div>
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<aside class="publication-sidebar">
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<div class="publication-links">
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<h2>Resources</h2>
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<ul>
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<li v-if="frontmatter.links.code"><a :href="frontmatter.links.code" target="_blank"><v-icon size="16" icon="mdi-code-braces"/>Link to Code</a></li>
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<li v-if="frontmatter.links.pdf"><a :href="frontmatter.links.pdf" target="_blank"><v-icon size="16" icon="mdi-file-document-outline"/>Publication (PDF)</a></li>
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<li v-if="frontmatter.links.archive"><a :href="frontmatter.links.archive" target="_blank"><v-icon size="16" icon="mdi-archive"/>Archive</a></li>
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<li v-if="frontmatter.links.video"><a :href="frontmatter.links.video" target="_blank"><v-icon size="16" icon="mdi-video-box"/>Link to Video</a></li>
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<li v-if="frontmatter.links.publisher"><a :href="frontmatter.links.publisher" target="_blank"><v-icon size="16" icon="mdi-earth"/>Link to Publisher</a></li>
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</ul>
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</div>
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</aside>
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</div>
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</template>
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<script setup>
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import { useData } from 'vitepress';
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const { frontmatter } = useData();
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</script>
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import { Content, useData } from 'vitepress';
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const { frontmatter } = useData();
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</script>
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<style>
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.publication-layout {
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display: flex;
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flex-direction: row;
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justify-content: space-between;
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max-width: 1200px; /* Adjust to match the default layout container width */
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margin: 0 auto;
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padding: 20px;
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min-height: 100vh; /* Ensure the layout stretches to the full height of the screen */
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}
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.publication-content {
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flex: 1;
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padding-right: 20px;
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}
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.publication-sidebar {
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width: 300px;
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padding-left: 20px;
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display: flex;
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flex-direction: column;
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justify-content: flex-start;
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}
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.publication-sidebar h2 {
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border-top: 0 !important;
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padding: 0;
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margin: 0;
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}
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.publication-image {
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max-width: 100%;
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margin-bottom: 20px;
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}
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.publication-links ul {
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list-style-type: none;
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padding: 0;
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}
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.publication-links li {
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margin-bottom: 10px;
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}
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</style>

‎pages/publications.md‎

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display: flex;
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flex-direction: row;
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margin-bottom: 20px;
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text-decoration: none !important;
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border-radius: 10px;
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}
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.publication:hover {
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background-color:rgb(245, 245, 245);
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color: #000!important;
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}
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.publication img {
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display: inline-block;
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}
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</style>
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<span></span>
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<v-row
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justify="space-between"
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class="mb-4"
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</v-row>
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<div class="container">
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<div v-for="publication in sortedPublications" :key="publication.title" class="publication">
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<a v-for="publication in sortedPublications" :key="publication.title" :href="publication.link" class="publication">
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<img v-if="publication.image" :src="`../assets/images/publications/${publication.image.src}`" :alt="publication.image.alt">
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<div class="publication-info">
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<p>{{ publication.authors }}</p>
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<a :href="publication.link" target="_blank">{{ publication.title }}</a>
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<p>{{ publication.title }}</p>
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<p>{{ publication.conference }} ({{ publication.year }})</p>
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</div>
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</div>
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</a>
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</div>

‎pages/publications/2020_uncertain_deepssm.md‎

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---
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layout: publication
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title: "Uncertain-DeepSSM: From Images to Probabilistic Shape Models"
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authors: "Jadie Adams, Riddhish Bhalodia, Shireen Elhabian. "
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conference: "Shape in Medical Imaging (ShapeMI) at MICCAI"
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year: "2020"
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link: "https://arxiv.org/abs/2007.06516"
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links:
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archive: "https://arxiv.org/abs/2007.06516"
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image:
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src: "2020_uncertain_deepssm.png"
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alt: Results Highlight

‎pages/publications/2021_benchmarking.md‎

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---
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layout: publication
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title: "Benchmarking Off-the-shelf Statistical Shape Modeling Tools in Clinical Applications"
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authors: "Anupama Goparaju, Krithika Iyer, Alexandre Bône, Nan Hu, Heath B. Henninger, Andrew E. Anderson, Stanley Durrleman, Matthijs Jacxsens, Alan Morris, Ibolya Csecs, Nassir Marrouche, Shireen Y. Elhabian"
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conference: "Medical Image Analysis"
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year: "2021"
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link: "https://www.sciencedirect.com/science/article/pii/S1361841521003169"
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links:
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publisher: "https://www.sciencedirect.com/science/article/pii/S1361841521003169"
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image:
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src: "2021_benchmarking.jpg"
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alt: Benchmarking FrameWork

‎pages/publications/2022_rvtr.md‎

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---
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layout: publication
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title: "All Roads Lead to Rome: Diverse Etiologies of Tricuspid Regurgitation Create a Predictable Constellation of Right Ventricular Shape Changes"
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authors: "Benjamin A. Orkild, Brian Zenger*, Krithika Iyer*,
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Lindsay C. Rupp, Masjid M. Ibrahim, Atefeh G. Khashani, Maura D. Perez, Markus D. Foote, Jake A. Bergquist, Alan K. Morris, Shireen Elhabian and others"
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conference: "Frontiers in Physiology"
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year: "2022"
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link: "https://www.frontiersin.org/journals/physiology/articles/10.3389/fphys.2022.908552/full"
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links:
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publisher: "https://www.frontiersin.org/journals/physiology/articles/10.3389/fphys.2022.908552/full"
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image:
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src: "2022_rvtr.jpg"
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alt: Results Highlight

‎pages/publications/2022_sharedboundary.md‎

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---
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layout: publication
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title: "Statistical Shape Modeling of Biventricular Anatomy with Shared Boundaries"
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authors: "Krithika Iyer, Alan Morris, Brian Zenger, Karthik Karnath, Benjamin A. Orkild, Oleksandre Korshak, Shireen Elhabian. "
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conference: "Statistical Atlases and Computational Models of the Heart (STACOM) at MICCAI"
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year: "2022"
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link: "https://pmc.ncbi.nlm.nih.gov/articles/PMC10103081/"
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links:
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publisher: "https://pmc.ncbi.nlm.nih.gov/articles/PMC10103081/"
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image:
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src: "2022_stacom_shared.jpg"
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alt: Results Highlight

‎pages/publications/2022_spatiotemporal_ssm.md‎

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---
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layout: publication
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title: "Spatiotemporal Cardiac Statistical Shape Modeling: A Data-Driven Approach"
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authors: "Jadie Adams, Nawazish Khan, Alan Morris, Shireen Elhabian"
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conference: "Statistical Atlases and Computational Models of the Heart (STACOM) at MICCAI"
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year: "2022"
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link: "https://arxiv.org/abs/2209.02736"
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links:
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archive: "https://arxiv.org/abs/2209.02736"
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image:
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src: "2022_spatiotemporal_ssm.png"
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alt: Results Highlight

‎pages/publications/2022_vib_deepssm.md‎

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---
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layout: publication
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title: "From Images to Probabilistic Anatomical Shapes: A Deep Variational Bottleneck Approach"
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authors: "Jadie Adams, Shireen Elhabian"
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conference: "MICCAI"
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year: "2022"
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link: "https://arxiv.org/abs/2205.06862"
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links:
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code: "https://github.com/MedVIC-Lab/VIB-DeepSSM"
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archive: "https://arxiv.org/abs/2205.06862"
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image:
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src: "2022_vib_deepssm.png"
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alt: Results Highlight

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