added ogc app pack action

Author: marjo-luc

.github/workflows/build-app-pack.yml

@@ -0,0 +1,23 @@
+on:
+  push:
+    branches:
+      - mlucas/ogc
+jobs:
+  build_app_pack:
+    environment: DIT
+    runs-on: ubuntu-latest
+
+    permissions:
+      contents: write
+      packages: write
+
+    steps:
+      - name: Checkout repo content
+        uses: actions/checkout@v4
+
+      - name: Use OGC App Pack Generator Action
+        uses: MAAP-Project/ogc-app-pack-generator@feature/create-action
+        with:
+          # Specify action inputs
+          algorithm-configuration-path: ogc/algorithm_config.yml
+          dockerfile-path: Dockerfile

Dockerfile

@@ -0,0 +1,15 @@
+# Use miniconda as the base image with the specified version.
+FROM continuumio/miniconda3:23.10.0-1
+ENV LANG en_US.UTF-8
+ENV TZ US/Pacific
+ARG DEBIAN_FRONTEND=noninteractive
+
+# Create a directory for the dps-unit-test application
+RUN mkdir -p /app/dps-unit-test
+
+# Copy application files to the working directory
+COPY ./ /app/dps-unit-test
+
+# Assign execute permissions to the scripts
+RUN chmod +x /app/dps-unit-test/run-test.sh
+

input_file.txt

@@ -0,0 +1,26 @@
+# Input params for OGC application package generator
+# The information provided in this file supports CWL and OGC best practices
+algorithm_description: Unit testing DPS for new cluster setups
+algorithm_name: dps-unit-test
+algorithm_version: mlucas/ogc
+keywords: ogc, dps, test
+code_repository: https://github.com/MAAP-Project/dps-unit-test.git
+citation: https://github.com/MAAP-Project/dps-unit-test.git
+author: mlucas
+contributor: mlucas
+license: https://github.com/MAAP-Project/dps-unit-test/blob/main/LICENSE
+release_notes: None
+run_command: /app/dps-unit-test/run-test.sh
+ram_min: 5 # mebibytes
+cores_min: 1
+outdir_max: 20 # mebibytes
+
+inputs:
+  - name: input_file
+    doc: Input file
+    label: input file
+    type: string
+
+outputs:
+  - name: out
+    type: Directory

ogc/algorithm_config.yml

@@ -3,6 +3,7 @@
 import os
 
 date = datetime.now().isoformat()
+print(sys.argv)
 input_file = sys.argv[1]
 with open(input_file, 'r') as fr:
     print(f"Opening input file {input_file} success")