Fix genome version from GR38 to GRCh38

robert-a-forsyth · web-flow · commit a2378df7febe · 2025-09-04T15:06:59.000+02:00
diff --git a/conf/test.config b/conf/test.config
@@ -29,7 +29,7 @@ params {
     input    = "https://raw.githubusercontent.com/IntGenomicsLab/test-datasets/main/samplesheets/samplesheet_lr-somatic.csv"
 
     // Additional params
-    genome             = "GR38"
+    genome             = "GRCh38"
     ascat_min_counts   = 2
     skip_wakhan        = true
 }

Original file line number	Diff line number	Diff line change
`@@ -29,7 +29,7 @@ params {`
`29`	`29`	`input = "https://raw.githubusercontent.com/IntGenomicsLab/test-datasets/main/samplesheets/samplesheet_lr-somatic.csv"`
`30`	`30`
`31`	`31`	`// Additional params`
`32`		`- genome = "GR38"`
	`32`	`+ genome = "GRCh38"`
`33`	`33`	`ascat_min_counts = 2`
`34`	`34`	`skip_wakhan = true`
`35`	`35`	`}`