Merge pull request #594 from bnmajor/use-itk-5.3

Use itk 5.3

Author: bnmajor

.github/workflows/notebook-test.yml

@@ -30,7 +30,7 @@ jobs:
           python3 -m pip install -e ".[test,all]"
           python3 -m pip install pyimagej
           python3 -c "import imagej; ij = imagej.init('2.5.0'); print(ij.getVersion())"
-          python3 -m pip install --upgrade --pre itk
+          python3 -m pip install "itk>=5.3.0"
 
       - name: Test notebooks
         run: |

docs/integrations.md

@@ -36,7 +36,7 @@ ITK
 Install ITK:
 
 ```bash
-pip install --pre itk-io
+pip install itk-io
 ```
 
 You can use ITK to read in and filter your data before displaying and interacting with it with the Viewer.

examples/integrations/dask/DaskArray.ipynb

@@ -22,8 +22,7 @@
     "# Install dependencies for this example\n",
     "import sys\n",
     "\n",
-    "!{sys.executable} -m pip install -q --upgrade --pre itk-io\n",
-    "!{sys.executable} -m pip install -q 'dask[diagnostics]' toolz scikit-image pooch matplotlib \"itkwidgets[all]>=1.0a16\""
+    "!{sys.executable} -m pip install -q 'dask[diagnostics]' toolz scikit-image pooch matplotlib \"itkwidgets[all]>=1.0a16\" \"itk-io>=5.3.0\""
    ]
   },
   {

examples/integrations/itk/3DImage.ipynb

@@ -21,7 +21,7 @@
     "# Install dependencies for this example\n",
     "import sys\n",
     "\n",
-    "!{sys.executable} -m pip install -q pooch tqdm itk-io \"itkwidgets[all]>=1.0a16\""
+    "!{sys.executable} -m pip install -q \"itk-io>=5.3.0\" \"itkwidgets[all]>=1.0a16\""
    ]
   },
   {

examples/integrations/itk/DICOM.ipynb

@@ -22,7 +22,7 @@
     "# Install dependencies for this example\n",
     "import sys\n",
     "\n",
-    "!{sys.executable} -m pip install -q --upgrade --pre itk-io tqdm pooch \"itkwidgets[all]>=1.0a17\""
+    "!{sys.executable} -m pip install -q --upgrade \"itk-io>=5.3.0\" tqdm pooch \"itkwidgets[all]>=1.0a17\""
    ]
   },
   {

itkwidgets/integrations/itk.py

@@ -5,7 +5,7 @@
 try:
     import itk
     if not hasattr(itk, '__version__') or version.parse(itk.__version__) < version.parse('5.3.0'):
-      raise RuntimeError('itk 5.3rc4 or newer is required. `pip install --upgrade --pre itk`')
+      raise RuntimeError('itk 5.3 or newer is required. `pip install itk>=5.3.0`')
     HAVE_ITK = True
 except ImportError:
     pass
@@ -19,4 +19,4 @@ def itk_group_spatial_object_to_wasm_point_set(point_set):
 
 else:
     def itk_group_spatial_object_to_wasm_point_set(point_set):
-        raise RuntimeError('itk 5.3rc4 or newer is required. `pip install --upgrade --pre itk`')
+        raise RuntimeError('itk 5.3 or newer is required. `pip install itk>=5.3.0`')