diff --git a/.github/workflows/build_environment.yml b/.github/workflows/build_environment.yml index 5232db7..7bb7e2a 100644 --- a/.github/workflows/build_environment.yml +++ b/.github/workflows/build_environment.yml @@ -55,6 +55,8 @@ jobs: run: bash install_step0_conda.sh - name: install R dependencies run: bash install_step1_R.sh + - name: install python dependencies + run: bash install_step2_pip.sh - name: run_test run: bash run_minimal_test.sh - name: List full installation of the conda environment diff --git a/.gitignore b/.gitignore index e90b739..8ca9dd8 100644 --- a/.gitignore +++ b/.gitignore @@ -1 +1,3 @@ .pre-commit-config.yaml +random-functions +rgcvpack diff --git a/create_environment.sh b/create_environment.sh index a2549ca..0f42238 100644 --- a/create_environment.sh +++ b/create_environment.sh @@ -1,3 +1,4 @@ #!/bin/bash bash install_step0_conda.sh bash install_step1_R.sh +bash install_step2_pip.sh diff --git a/install_step2_pip.sh b/install_step2_pip.sh new file mode 100644 index 0000000..c356e0c --- /dev/null +++ b/install_step2_pip.sh @@ -0,0 +1 @@ +pip install netcdf4 h5netcdf xarray numpy dask pandas pyyaml ruamel.yaml