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feature: gsea rank column in DE output #81

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kelly-sovacool opened this issue Jan 2, 2025 · 0 comments

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enhancement MOSuite

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kelly-sovacool commented Jan 2, 2025 •

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gsea_rank = sign(log2fc) * -log10(pvalue)

https://crazyhottommy.blogspot.com/2016/08/gene-set-enrichment-analysis-gsea.html

https://github.com/CCBR/Pipeliner/blob/1b6a20346002eca9fbec6eecefb84f80b44ce0ed/Results-template/Scripts/Deseq2Report.Rmd#L318

The text was updated successfully, but these errors were encountered:

kelly-sovacool added the enhancement label

kopardev added the MOSuite label

kelly-sovacool changed the title ~~feature: gsea rank column in output~~ feature: gsea rank column in DE output

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