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content/9.2_Structural_Scoring_for_Antibody_Engineering.ipynb

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"source": [
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"# 3. Structural Validation of Candidates\n",
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"\n",
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"Fold variants and calculate RMSD from parent structures. Below are the target seqs as defined via PDB fasta entries. Note that not all these residues are extracted from the pdb structures. When comparing When comparing complex predicitons equal number of atoms between prediction and truth can simplify rmsd base scoring."
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"Fold variants and calculate RMSD from parent structures. Below are the target seqs as defined via PDB fasta entries. Note that not all these residues are extracted from the pdb structures since comparing structure predictions is simplified with an equal number of atoms between prediction and truth."
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"view.setStyle({'model': -1}, {\"cartoon\": {'color': 'spectrum'}})\n",
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"view.zoomTo()"
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{
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"cell_type": "code",
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"execution_count": null,
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"id": "cde06f47-7831-4f27-9f29-f6b19382293a",
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"metadata": {},
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"outputs": [],
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"source": []
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"metadata": {

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