@@ -8,18 +8,25 @@ relecov-tools is a set of helper tools for the assembly of the different element
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## Table of contents
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- * [ Installation] ( #installation )
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- * [ Usage] ( #usage )
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- * [ download] ( #download )
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- * [ read-lab-metadata] ( #read-lab-metadata )
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- * [ read-bioinfo-metadata] ( #read-bioinfo-metadata )
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- * [ validate] ( #validate )
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- * [ map] ( #map )
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- * [ upload-to-ena] ( #upload-to-ena )
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- * [ upload-to-gisaid] ( #upload-to-gisaid )
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- * [ launch] ( #launch )
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- * [ update-db] ( #update-db )
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- * [ Aknowledgements] ( #aknowledgements )
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+ - [ relecov-tools] ( #relecov-tools )
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+ - [ Table of contents] ( #table-of-contents )
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+ - [ Installation] ( #installation )
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+ - [ Bioconda] ( #bioconda )
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+ - [ Pip] ( #pip )
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+ - [ Development version] ( #development-version )
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+ - [ Usage] ( #usage )
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+ - [ Command-line] ( #command-line )
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+ - [ download] ( #download )
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+ - [ read-lab-metadata] ( #read-lab-metadata )
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+ - [ read-bioinfo-metadata] ( #read-bioinfo-metadata )
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+ - [ validate] ( #validate )
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+ - [ map] ( #map )
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+ - [ upload-to-ena] ( #upload-to-ena )
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+ - [ upload-to-gisaid] ( #upload-to-gisaid )
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+ - [ update-db] ( #update-db )
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+ - [ launch] ( #launch )
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+ - [ Python package mode] ( #python-package-mode )
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+ - [ Acknowledgements] ( #acknowledgements )
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## Installation
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@@ -255,3 +262,5 @@ DOCs soon!!
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## Acknowledgements
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Python package idea and design is really inspired in [ nf-core/tools] ( https://github.com/nf-core/tools ) .
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+ test
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