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biblio.bib
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@misc{GooglereWork2017,
author = {{Google reWork}},
publisher = {Google},
title = {{Guide: Understand team effectiveness}},
howpublished = {\url{https://rework.withgoogle.com/guides/understanding-team-effectiveness/steps/introduction/}},
year = {2017}
}
@misc{elife_template,
author = {eLife Editorial Team},
publisher = {eLife},
title = {eLife Publication Template},
howpublished = {\url{https://submit.elifesciences.org/html/elife_author_instructions.html}},
year = {2017}
}
@article{Edmondson1999,
author = {Edmondson, Amy},
doi = {10.2307/2666999},
issn = {00018392},
journal = {Administrative Science Quarterly},
month = {Jun},
number = {2},
pages = {350},
title = {{Psychological Safety and Learning Behavior in Work Teams}},
howpublished = {\url{https://www.jstor.org/stable/2666999?origin=crossref}},
url = {https://www.jstor.org/stable/2666999},
volume = {44},
year = {1999}
}
@article{wickham2017tidyverse,
title={Tidyverse: Easily install and load tidyverse packages},
author={Wickham, Hadley},
journal={Tidyverse},
url={http://tidyverse.tidyverse.org},
year={2017}
}
@article{Wilson2017,
author = {Wilson, Greg and Bryan, Jennifer and Cranston, Karen and Kitzes, Justin and Nederbragt, Lex and Teal, Tracy K.},
doi = {10.1371/journal.pcbi.1005510},
editor = {Ouellette, Francis},
issn = {1553-7358},
journal = {PLOS Computational Biology},
month = {Jun},
number = {6},
pages = {e1005510},
publisher = {Public Library of Science},
title = {{Good enough practices in scientific computing}},
howpublished = {\url{http://dx.plos.org/10.1371/journal.pcbi.1005510}},
volume = {13},
year = {2017}
}
@article{elish2018,
author = {Elish, M.C. and boyd, danah},
title = {Situating methods in the magic of Big Data and AI},
journal = {Communication Monographs},
volume = {85},
number = {1},
pages = {57-80},
year = {2018},
publisher = {Routledge},
URL = {
https://doi.org/10.1080/03637751.2017.1375130
},
eprint = {
https://doi.org/10.1080/03637751.2017.1375130
}
}
@article{Sandve2013,
author = {Sandve, Geir Kjetil and Nekrutenko, Anton and Taylor, James and Hovig, Eivind},
doi = {10.1371/journal.pcbi.1003285},
editor = {Bourne, Philip E.},
issn = {1553-7358},
journal = {PLoS Computational Biology},
number = {10},
publisher = {Public Library of Science},
title = {{Ten Simple Rules for Reproducible Computational Research}},
howpublished = {\url{https://dx.plos.org/10.1371/journal.pcbi.1003285}},
volume = {9},
year = {2013}
}
@article{Goodman2014,
author = {Goodman, Alyssa and Pepe, Alberto and Blocker, Alexander W. and Borgman, Christine L. and Cranmer, Kyle and Crosas, Merce and {Di Stefano}, Rosanne and Gil, Yolanda and Groth, Paul and Hedstrom, Margaret and Hogg, David W. and Kashyap, Vinay and Mahabal, Ashish and Siemiginowska, Aneta and Slavkovic, Aleksandra},
doi = {10.1371/journal.pcbi.1003542},
editor = {Bourne, Philip E.},
issn = {1553-7358},
journal = {PLoS Computational Biology},
month = {Apr},
number = {4},
pages = {e1003542},
publisher = {Public Library of Science},
title = {{Ten Simple Rules for the Care and Feeding of Scientific Data}},
howpublished = {\url{http://dx.plos.org/10.1371/journal.pcbi.1003542}},
volume = {10},
year = {2014}
}
@article{Wilson2014,
abstract = {We describe a set of best practices for scientific software development, based on research and experience, that will improve scientists' productivity and the reliability of their software.},
author = {Wilson, Greg and Aruliah, D. A. and Brown, C. Titus and {Chue Hong}, Neil P. and Davis, Matt and Guy, Richard T. and Haddock, Steven H. D. and Huff, Kathryn D. and Mitchell, Ian M. and Plumbley, Mark D. and Waugh, Ben and White, Ethan P. and Wilson, Paul},
doi = {10.1371/journal.pbio.1001745},
editor = {Eisen, Jonathan A.},
issn = {1545-7885},
journal = {PLoS Biology},
month = {Jan},
number = {1},
pages = {e1001745},
publisher = {Public Library of Science},
title = {{Best Practices for Scientific Computing}},
howpublished = {\url{https://dx.plos.org/10.1371/journal.pbio.1001745}},
volume = {12},
year = {2014}
}
@book{Kitzes2018,
address = {Oakland},
author = {Kitzes, Justin and Turek, Daniel and Deniz, Fatma},
isbn = {0520294750},
pages = {337},
publisher = {University of California Press},
title = {{The Practice of Reproducible Research : Case Studies and Lessons from the Data-Intensive Sciences}},
howpublished = {\url{http://practicereproducibleresearch.org}},
url = {http://practicereproducibleresearch.org},
year = {2018}
}
@Article{PerezRiverol2016,
Author="Perez-Riverol, Y. and Gatto, L. and Wang, R. and Sachsenberg, T. and Uszkoreit, J. and Leprevost, F. d. a. V. and Fufezan, C. and Ternent, T. and Eglen, S. J. and Katz, D. S. and Pollard, T. J. and Konovalov, A. and Flight, R. M. and Blin, K. and Vizcaino, J. A. ",
Title="{{T}en {S}imple {R}ules for {T}aking {A}dvantage of {G}it and {G}it{H}ub}",
Journal="PLoS Comput. Biol.",
Year="2016",
Volume="12",
Number="7",
Pages="e1004947",
Month="07"
}
@Article{Noble2009,
Author="Noble, W. S. ",
Title="{{A} quick guide to organizing computational biology projects}",
Journal="PLoS Comput. Biol.",
Year="2009",
Volume="5",
Number="7",
Pages="e1000424",
Month="Jul"
}
@article{vanderwalt2011,
added-at = {2018-08-13T00:00:00.000+0200},
author = {van der Walt, Stéfan and Colbert, S. Chris and Varoquaux, Gaël},
biburl = {https://www.bibsonomy.org/bibtex/20041f3cc927867122722827bfa8a44c5/dblp},
ee = {http://arxiv.org/abs/1102.1523},
interhash = {2fc2613398c8f4b87f9722645972ba44},
intrahash = {0041f3cc927867122722827bfa8a44c5},
journal = {CoRR},
keywords = {dblp},
timestamp = {2018-08-14T13:56:30.000+0200},
title = {The NumPy array: a structure for efficient numerical computation},
url = {http://arxiv.org/abs/1102.1523},
volume = {abs/1102.1523},
year = 2011
}
@book{NAP19007,
address = {Washington, DC},
author = {{National Research Council}},
doi = {10.17226/19007},
editor = {Cooke, Nancy and Hilton, Margaret},
isbn = {978-0-309-31682-8},
publisher = {The National Academies Press},
title = {{Enhancing the Effectiveness of Team Science}},
year = {2015}
}
@Article{Hunter2007,
Author = {Hunter, J. D.},
Title = {Matplotlib: A 2D graphics environment},
Journal = {Computing In Science \& Engineering},
Volume = {9},
Number = {3},
Pages = {90--95},
abstract = {Matplotlib is a 2D graphics package used for Python
for application development, interactive scripting, and
publication-quality image generation across user
interfaces and operating systems.},
publisher = {IEEE COMPUTER SOC},
doi = {10.1109/MCSE.2007.55},
year = 2007
}
@book{Latour1979,
address = {Beverly Hills},
author = {Latour, Bruno and Woolgar, Steve},
isbn = {9780803909939},
mendeley-groups = {quals},
publisher = {Sage Publications},
shorttitle = {Laboratory Life},
title = {{Laboratory Life: The Social Construction of Scientific Facts}},
year = {1979}
}
@book{traweek1992,
author = {Traweek, Sharon},
title = {Beamtimes and Lifetimes: The World of High Energy Physicists},
publisher = {Harvard University Press},
address = {Cambridge},
year = {1992}
}
@article{pentland2012,
author = {Pentland, A},
issn = {00178012},
journal = {Harvard Business Review},
url = {https://hbr.org/2012/04/the-new-science-of-building-great-teams},
month = {Apr},
number = {4},
pages = {60--69},
title = {{The new science of building great teams}},
volume = {90},
year = {2012}
}
@book{borgman2015,
author = {Borgman, Christine},
title = {Big Data, Little Data, No Data: Scholarship in the Networked World},
publisher = {The MIT Press},
year = {2015},
location = {Cambridge}
}
@book{patil2011building,
title={Building Data Science Teams},
author={Patil, D.J.},
year={2011},
publisher={O'Reilly Media},
address={Sebastopol}
}
@article{neff2017critique,
title={Critique and contribute: A practice-based framework for improving critical data studies and data science},
author={Neff, Gina and Tanweer, Anissa and Fiore-Gartland, Brittany and Osburn, Laura},
journal={Big Data},
volume={5},
number={2},
pages={85--97},
year={2017}
}