EvoR/CITATION.cff at main · BDB-Genomics/EvoR · GitHub

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cff-version: 1.2.0
title: "EvoR: An R Interface for the Evo2 Genomic Foundation Model"
message: "If you use this software, please cite it as below."
authors:
  - given-names: "Himanshu"
    family-names: "Bhandary"
    email: "2032ushimanshu@gmail.com"
    orcid: "https://orcid.org/0009-0002-9859-3934"
    affiliation: "BDB-Genomics"
version: 1.0.0
date-released: 2026-06-22
doi: 10.5281/zenodo.20113473
license: Apache-2.0
url: https://github.com/BDB-Genomics/EvoR
repository: https://github.com/BDB-Genomics/EvoR
abstract: |
  EvoR provides a lightweight R interface for the Evo2 genomic foundation
  model via the NVIDIA BioNeMo API. Supports biological sequence generation,
  log-likelihood scoring for Variant Effect Prediction (VEP), and high-dimensional
  sequence embeddings for downstream regulatory pattern recognition.
keywords:
  - R
  - bioinformatics
  - genomics
  - deep-learning
  - evo2
  - nvidia-bionemo
  - variant-effect-prediction
references:
  - type: article
    title: "Evo2: Advancing genomic foundation models"
    journal: "Nature"
    year: 2026
    url: "https://www.nature.com/articles/s41586-026-10176-5"