From c14d7ac3fa64fc47f6c88f79f0fe5e0017ac3973 Mon Sep 17 00:00:00 2001
From: Aaron Virshup <avirshup@gmail.com>
Date: Wed, 11 Oct 2017 17:27:38 -0700
Subject: [PATCH] Fix biopython test

---
 moldesign/_tests/test_biopython_xface.py | 6 ++++--
 1 file changed, 4 insertions(+), 2 deletions(-)

diff --git a/moldesign/_tests/test_biopython_xface.py b/moldesign/_tests/test_biopython_xface.py
index 94794fa..3812a83 100644
--- a/moldesign/_tests/test_biopython_xface.py
+++ b/moldesign/_tests/test_biopython_xface.py
@@ -1,4 +1,4 @@
-
+import io
 import pytest
 import Bio.PDB
 import moldesign as mdt
@@ -9,8 +9,10 @@
 
 @pytest.fixture
 def biopy_3aid():
+    import gzip
     parser = Bio.PDB.PDBParser()
-    structure = parser.get_structure('3aid', get_data_path('3aid.pdb.gz'))
+    s = gzip.open(get_data_path('3aid.pdb.gz'), 'r').read().decode('utf-8')
+    structure = parser.get_structure('3aid', io.StringIO(s))
     return structure