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install with bioconda DOI

Bin Chicken

Bin Chicken - recovery of low abundance and taxonomically targeted metagenome assembled genomes (MAGs) through strategic coassembly.

Documentation can be found at https://AroneyS.github.io/binchicken/

Logo by Georgina H. Joyce | www.georginajoyce.com

Not to be confused with https://gitlab.com/andreassh/binchicken

Citation

Samuel T. N. Aroney, Rhys J. P. Newell, Gene W. Tyson and Ben J. Woodcroft. Bin Chicken: targeted metagenomic coassembly for the efficient recovery of novel genomes. bioRxiv (2024): 2024-11. https://doi.org/10.1101/2024.11.24.625082